TCONS_00071325 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071325
Unique NameTCONS_00071325
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1621

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071325 ID=TCONS_00071325|Name=TCONS_00071325|organism=Clytia hemisphaerica|type=transcript|length=1621bp
CTCCATCATCAGACTGGACATCATCACCACAGACTGTCGCGACGAGACCA
GCGTGATCATCAGCAGATCGTGAGTCGGGAACGAACCTTCATCACACTTT
ATGATTATGATCCTTACACTATGGGAACTACTGATCGACCTGATCTTCAA
CTCTCTCTAAAGAAAGGAGAGGTCATCACAGTTCTGGGTGAAGTGGATAT
TGAAGGATATTTCACAGCTGTCATCAATGGTCGACGTGGGTTAGTCCCAT
CCAACTTTGTTGAAGAATATTCACACTCTTCACATGCTGCGCACAATCAT
ACGAGAGAAGAACATTTCCAAGGCACTGTACAAGTTGATGGTATTTCTgG
ACCGCCATATGCGCCACGTGATTTGAAAGTAAAAAGAGTGGTCACACGTA
ACGCAGTTTTGTTGAGTTGGCTTTTACCGTCCATGGATGACCATTACATA
AGCAATGGATGCAAAGTCATCGGATATCGACTTTGGGTGAATGGTCAAAG
AAAACAAGATGTGACAAACCCATCGTGTAACAAGGCCCTTATTGATGATG
TCGATTTAGCAGGACGTGTTGAGTTCAGTATTCAAACGATCGGAGAAAGC
GACGTGTGTTCTGAGAAATGTCACTTCGCGATCACCGGCGCTTTGAGTAC
TCTTGAGACAAACGAAACATTGGAGATGGAAGGTGATCATGATGTGTTTG
TAGCATTATATGACTACGACCCCGTGAAGAGTTCACCGAACCCAAACCCT
GCATTGGAATTGTTGTTCCGTGAGGGTGACATGATGATCGTTTATGATAA
AAGTCGAAGCGATGGATTCTACTCAGCGAAGATGAACGGCAAGAAAGGAC
TTGTTCCGTCCAATTTTATCGAACGCGTCAATCGGCGTTCAACGCACAAG
ACATCTGCCACGTCATCGCGTCATTCGTCATCCATTCGCTCTTCCCGTCA
CGTGACTAGTCACCATGACTCTgaCAGCAATTCAAGGAAAGTGCaatttg
actcgaaatcaagcATCAAAAAGAAATAGATCACCATGAATTATTTACAC
GTGTTTTTGAAGGATATGAAGCAAGTTCACGATTAATTGTCATAAATTAG
ATATTTTTGTATGAGATGGGTTTATAGAAAAAGGTGCTGGTCGAAGGTTT
GGGAAATGAACAAGTCATGGCTTGGTTCTACCAACGAAAAGGAAAAAGGA
TTCCATCTATATGGACTTATGGGATTGTGAACTTGTTATCCAAGAAGTCA
AATGCCCAAATATAAAACTTATTGAACCTATAGAAAGATTAAAACTGTac
gaaatttaaatttgaatggCACCATTTCTGAGGATTGATAATCCTACTGT
CTGCTGTTTTGAACAGAACCATTAGTTTAGTTTGTTTTTCAATGCTGGTT
TTGtaagcatttttttaatttagccACAATATTTAGTTCTCTTCCTTTAG
GTAAACTGTCAGGgttaaggttttttttaattatcgtattgtaaattaaa
ttgtactttattgtttatagattATTATCATTAATTGCCAAATGCAAATA
TTACGGGATTTTTAGAGTAACCAGTCAGTTATAATAATTCATCCTTTAGT
ATCAGACTGTGAAAACGCCAT
Run BLAST on NCBI

protein sequence of TCONS_00071325-protein

>TCONS_00071325-protein ID=TCONS_00071325-protein|Name=TCONS_00071325-protein|organism=Clytia hemisphaerica|type=polypeptide|length=342bp
LHHQTGHHHHRLSRRDQRDHQQIVSRERTFITLYDYDPYTMGTTDRPDLQ
LSLKKGEVITVLGEVDIEGYFTAVINGRRGLVPSNFVEEYSHSSHAAHNH
TREEHFQGTVQVDGISGPPYAPRDLKVKRVVTRNAVLLSWLLPSMDDHYI
SNGCKVIGYRLWVNGQRKQDVTNPSCNKALIDDVDLAGRVEFSIQTIGES
DVCSEKCHFAITGALSTLETNETLEMEGDHDVFVALYDYDPVKSSPNPNP
ALELLFREGDMMIVYDKSRSDGFYSAKMNGKKGLVPSNFIERVNRRSTHK
TSATSSRHSSSIRSSRHVTSHHDSDSNSRKVQFDSKSSIKKK
Run BLAST on NCBI

transcript from alignment at scaffold_60:122853..127171-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071325 ID=TCONS_00071325|Name=TCONS_00071325|organism=Clytia hemisphaerica|type=transcript|length=4319bp|location=Sequence derived from alignment at scaffold_60:122853..127171- (Clytia hemisphaerica)
CTCCATCATCAGACTGGACATCATCACCACAGACTGTCGCGACGAGACCA
GCGTGATCATCAGCAGATCGTGAGTCGGGAACGAACCTTCATCACACTTT
ATGATTATGATCCTTACACTATGGGAACTACTGATCGACCTGATCTTCAA
CTCTCTCTAAAGAAAGGAGAGGTCATCACAGTTCTGGGTGAAGTGGATAT
TGAAGGATATTTCACAGCTGTCATCAATGGTAAAGTTTGAAAATGTTTTT
TTTCTATATTCTATTTGGCTCTGCTCTCTCGAACACGATGTTCAATATAC
TGTAATGTCAAAAAAAACATACCTACCGCGTTATATGGATTTAATCTTGG
TAACTTCTTCACAATTATGGAGTTTAGCTATCTATAACTATTTGACATCT
TGAAAAAAAATCAACAGTAAATATAGACTAAAGAACTTTCTATTTGGTTT
GGTCTGGATAAGTTTCTGTCAACCTTTACCTTGGCAAGTTTTCCTTAAGA
AAATTGTATTAGTAATTGCCTAAGATTTTCTACGTTTTTTTAATCAAATT
TCCCGGTTCACACTTTCTTTAGGTCGACGTGGGTTAGTCCCATCCAACTT
TGTTGAAGAATATTCACACTCTTCACATGCTGCGCACAATCATACGAGAG
AAGAACATTTCCAAGGCACTGTACAAGTTGATGGTATTTCTGGTAAAAAA
CATATAAAATTGAGCTTCCTTCAAGACCATCATGTTGAAGTTTATTTTCC
GATTTATAACGACTCTAAAAAAAGCCTAAAATATCAAGAATAAACTCCGT
TTCACAAGAATAGTACTACAAAAGGAGAGTTCTCTCGGCCCTAGTGACGA
AATTGTTGATTTTCTTTTACAAACCTTTTCAACGTTCTCGTCTAAAGTTG
AACTAGCACTACGGTACAAGACTGTAGCTTATTAAGGGCTCTGACCATAG
TGAATTTTTCATAATTGATGTGTTTAAAATGTGTTTTCTGACTGATGTAA
CCAACAAAACTATGACATGTTATACATTTTTTGTTAGACAAACTACTCCT
GAATCTGAAAATTCAAAAATTGCATTGGAAAAATTTGACGAAGAAGAAAA
TGAAAACTTTTTCGAGGAAGAGTATTTCAACTTTGAAGAGTTTAGTTTCG
GAGAAGAAAAAAGATTTTGAATTTTTTTTCGCAGTAGATGGTGTATCTTT
TACCGAATAATCAAAATTTTTGCGGAAAATTTTTGTAAATGCTTCTTTGT
CTCAAAATCTTCAAAATAGTGGTTTTTCATCAATTTTTCATCTGGATTTT
GCTTAAAAAAACAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCAGAGCCCTTAAGTAGA
AAAGGGTAGTTTTTGTGAATTGAGTTGCTAAAATTTATATTCATTTGTGA
TAGAAATGAACTAAATCGACTTAAAATCCTTTTTAGGACCGCCATATGCG
CCACGTGATTTGAAAGTAAAAAGAGTGGTCACACGTAACGCAGTTTTGTT
GAGTTGGCTTTTACCGTCCATGGATGACCATTACATAAGCAATGGATGCA
AAGTCATCGGATATCGAGTAGGTGTTTTGAATTTTTCTCAGCCTTTCGAT
CCATTAATGAATGCACAGAAAGGCTTCAACCTTCCCGATCTCACTCGTCT
GCTTTTTTGCAATAATCGTGATTCATGTATTTGTTACAGTGGTGGTCTTC
AAATTTGATAGTAGAAAATAGATTGAAGCGTAATCTAGCAGTCGTTATTG
TAATTGCGGTTTTCTTTGCCTTCGCTGGCGCTCTCTAATTTGACGTTATA
CCAAGGACTACTACGCCTCATTATTCAATAATATAATCATAATATTGAAA
GTCACTGTCAACGAGAAGCTCTCATGAAGGACGCACTTCTTTTCGATACG
ATGTATTTCCTATGACTTGTTTGAGAGTCAATGTAGTTAATCTGTTGGTA
TCTTTAAGGCTTCTTTTTTAATTATAGCTTTGGGTGAATGGTCAAAGAAA
ACAAGATGTGACAAACCCATCGTGTAACAAGGCCCTTATTGATGATGTCG
ATTTAGCAGGACGTGTTGAGTTCAGTATTCAAACGATCGGAGAAAGCGAC
GTGTGTTCTGAGAAATGTCACTTCGCGATCACCGGCGCTTTGAGTACTCT
TGTAAGTAATGTATATGCTCTTTGGAAACTCATTGAAGGCTTTTCTTCAG
GAAATCATCCTGGATTTTAATCTTTAAATGAAAATGTCATTTGTAATTTT
TTTAAATGAATACTTATTGAGAATTTGGTGTTTGATTTGTAGCGGGAGAG
ATAGAGAGTTTTATAATGGTTCTGAAAAGATGAAGATGGTAAGCTTACGG
TTTTCAGTTGGTCTGACCTTAAGGAAACTTATTTTGGCGGGAGCTAATTT
GAATTTACCCTGCCATTCGCCAAAAATATCGGCTCTCGGCAAAATTTAAA
AAAGATTGCTGCCTCGCCATGGAAGTCCCTCTCAAATTTAAAAGTAGGAT
TTCTGCTGCTGACCAAAATGAGCTTCTTAAGGTATTTACCGGTTGCATTC
TACTTTTTCAGGAGACAAACGAAACATTGGAGATGGAAGGTGATCATGAT
GTGGTGAGAAAATCATACTTTTTTACTCGCTTATATCCAAAGATCGTTTA
TTACTTTAAAGAAAAGGCTGGCGTTTTCCTATGAACCTTCCACGGGCTTT
CCATAGATATATGTTGTATATTGACACCAACTTATTTACCCAGAAATTCC
TTCTTCCTCTTACAGTTTGTAGCATTATATGACTACGACCCCGTGAAGAG
TTCACCGAACCCAAACCCTGCATTGGAATTGTTGTTCCGTGAGGGTGACA
TGATGATCGTTTATGATAAAAGTCGAAGCGATGGATTCTACTCAGCGAAG
GTATAAAGTAAAAGTTGGCTTTCATTCAATTCAAGTTTTTCTTTGCTAAT
GTTTAATTGATGCTCAGAATTAATGAATCCCCACACCAAAGGTCAATCGT
TGTTCTTGATTTTAAAGTTTAGTCTACCTTTTCACTGACTAAAAATCTTC
CAGAACGTTCCTTGTTTTGTACCTCCAATTGGCCTGATACTACTTCATAA
TCGACAAAAGCTATTCAACATTTACTAACATTTAATAAAACTTATCTATT
CAGATGAACGGCAAGAAAGGACTTGTTCCGTCCAATTTTATCGAACGCGT
CAATCGGCGTTCAACGCACAAGACATCTGCCACGTCATCGCGTCATTCGT
CATCCATTCGCTCTTCCCGTCACGTGACTAGTCACCATGACTCTGTAAGT
GTGAACGAATATCTTTTGTAAAAGCTTTTTTGACGACGGAGGTACAGTAT
TTGGACGAAAACCTTTTGTTGAAAATAGATGGGGATGGCGGAATAATAAT
ATCCTTGGTAGGAACCTTCCTAAAACTTAAACGCAGAAGAAAGCTTTTTG
AAAGACTAAGAACGCACTAAGAGATATCCGTTCAGAATATGATAAGGTGC
GAATTTTGCTGCCTAGGATTGGAAAAGTTAACACAGCACCTGAAACCTTT
CGTCTTTTTTAACTTTTTAGGACAGCAATTCAAGGAAAGTGCAATTTGAC
TCGAAATCAAGCATCAAAAAGAAATAGATCACCATGAATTATTTACACGT
GTTTTTGAAGGATATGAAGCAAGTTCACGATTAATTGTCATAAATTAGAT
ATTTTTGTATGAGATGGGTTTATAGAAAAAGGTGCTGGTCGAAGGTTTGG
GAAATGAACAAGTCATGGCTTGGTTCTACCAACGAAAAGGAAAAAGGATT
CCATCTATATGGACTTATGGGATTGTGAACTTGTTATCCAAGAAGTCAAA
TGCCCAAATATAAAACTTATTGAACCTATAGAAAGATTAAAACTGTACGA
AATTTAAATTTGAATGGCACCATTTCTGAGGATTGATAATCCTACTGTCT
GCTGTTTTGAACAGAACCATTAGTTTAGTTTGTTTTTCAATGCTGGTTTT
GTAAGCATTTTTTTAATTTAGCCACAATATTTAGTTCTCTTCCTTTAGGT
AAACTGTCAGGGTTAAGGTTTTTTTTAATTATCGTATTGTAAATTAAATT
GTACTTTATTGTTTATAGATTATTATCATTAATTGCCAAATGCAAATATT
ACGGGATTTTTAGAGTAACCAGTCAGTTATAATAATTCATCCTTTAGTAT
CAGACTGTGAAAACGCCAT

Coding sequence (CDS) from alignment at scaffold_60:122853..127171-

>TCONS_00071325 ID=TCONS_00071325|Name=TCONS_00071325|organism=Clytia hemisphaerica|type=CDS|length=8232bp|location=Sequence derived from alignment at scaffold_60:122853..127171- (Clytia hemisphaerica)
GACAGCAATTCAAGGAAAGTGCAATTTGACTCGAAATCAAGCATCAAAAA
GAAATAGATGAACGGCAAGAAAGGACTTGTTCCGTCCAATTTTATCGAAC
GCGTCAATCGGCGTTCAACGCACAAGACATCTGCCACGTCATCGCGTCAT
TCGTCATCCATTCGCTCTTCCCGTCACGTGACTAGTCACCATGACTCTTT
TGTAGCATTATATGACTACGACCCCGTGAAGAGTTCACCGAACCCAAACC
CTGCATTGGAATTGTTGTTCCGTGAGGGTGACATGATGATCGTTTATGAT
AAAAGTCGAAGCGATGGATTCTACTCAGCGAAGGAGACAAACGAAACATT
GGAGATGGAAGGTGATCATGATGTGCTTTGGGTGAATGGTCAAAGAAAAC
AAGATGTGACAAACCCATCGTGTAACAAGGCCCTTATTGATGATGTCGAT
TTAGCAGGACGTGTTGAGTTCAGTATTCAAACGATCGGAGAAAGCGACGT
GTGTTCTGAGAAATGTCACTTCGCGATCACCGGCGCTTTGAGTACTCTTG
ACCGCCATATGCGCCACGTGATTTGAAAGTAAAAAGAGTGGTCACACGTA
ACGCAGTTTTGTTGAGTTGGCTTTTACCGTCCATGGATGACCATTACATA
AGCAATGGATGCAAAGTCATCGGATATCGAGTCGACGTGGGTTAGTCCCA
TCCAACTTTGTTGAAGAATATTCACACTCTTCACATGCTGCGCACAATCA
TACGAGAGAAGAACATTTCCAAGGCACTGTACAAGTTGATGGTATTTCTG
CTCCATCATCAGACTGGACATCATCACCACAGACTGTCGCGACGAGACCA
GCGTGATCATCAGCAGATCGTGAGTCGGGAACGAACCTTCATCACACTTT
ATGATTATGATCCTTACACTATGGGAACTACTGATCGACCTGATCTTCAA
CTCTCTCTAAAGAAAGGAGAGGTCATCACAGTTCTGGGTGAAGTGGATAT
TGAAGGATATTTCACAGCTGTCATCAATGGACAGCAATTCAAGGAAAGTG
CAATTTGACTCGAAATCAAGCATCAAAAAGAAATAGATGAACGGCAAGAA
AGGACTTGTTCCGTCCAATTTTATCGAACGCGTCAATCGGCGTTCAACGC
ACAAGACATCTGCCACGTCATCGCGTCATTCGTCATCCATTCGCTCTTCC
CGTCACGTGACTAGTCACCATGACTCTTTTGTAGCATTATATGACTACGA
CCCCGTGAAGAGTTCACCGAACCCAAACCCTGCATTGGAATTGTTGTTCC
GTGAGGGTGACATGATGATCGTTTATGATAAAAGTCGAAGCGATGGATTC
TACTCAGCGAAGGAGACAAACGAAACATTGGAGATGGAAGGTGATCATGA
TGTGCTTTGGGTGAATGGTCAAAGAAAACAAGATGTGACAAACCCATCGT
GTAACAAGGCCCTTATTGATGATGTCGATTTAGCAGGACGTGTTGAGTTC
AGTATTCAAACGATCGGAGAAAGCGACGTGTGTTCTGAGAAATGTCACTT
CGCGATCACCGGCGCTTTGAGTACTCTTGACCGCCATATGCGCCACGTGA
TTTGAAAGTAAAAAGAGTGGTCACACGTAACGCAGTTTTGTTGAGTTGGC
TTTTACCGTCCATGGATGACCATTACATAAGCAATGGATGCAAAGTCATC
GGATATCGAGTCGACGTGGGTTAGTCCCATCCAACTTTGTTGAAGAATAT
TCACACTCTTCACATGCTGCGCACAATCATACGAGAGAAGAACATTTCCA
AGGCACTGTACAAGTTGATGGTATTTCTGCTCCATCATCAGACTGGACAT
CATCACCACAGACTGTCGCGACGAGACCAGCGTGATCATCAGCAGATCGT
GAGTCGGGAACGAACCTTCATCACACTTTATGATTATGATCCTTACACTA
TGGGAACTACTGATCGACCTGATCTTCAACTCTCTCTAAAGAAAGGAGAG
GTCATCACAGTTCTGGGTGAAGTGGATATTGAAGGATATTTCACAGCTGT
CATCAATGGACAGCAATTCAAGGAAAGTGCAATTTGACTCGAAATCAAGC
ATCAAAAAGAAATAGATGAACGGCAAGAAAGGACTTGTTCCGTCCAATTT
TATCGAACGCGTCAATCGGCGTTCAACGCACAAGACATCTGCCACGTCAT
CGCGTCATTCGTCATCCATTCGCTCTTCCCGTCACGTGACTAGTCACCAT
GACTCTTTTGTAGCATTATATGACTACGACCCCGTGAAGAGTTCACCGAA
CCCAAACCCTGCATTGGAATTGTTGTTCCGTGAGGGTGACATGATGATCG
TTTATGATAAAAGTCGAAGCGATGGATTCTACTCAGCGAAGGAGACAAAC
GAAACATTGGAGATGGAAGGTGATCATGATGTGCTTTGGGTGAATGGTCA
AAGAAAACAAGATGTGACAAACCCATCGTGTAACAAGGCCCTTATTGATG
ATGTCGATTTAGCAGGACGTGTTGAGTTCAGTATTCAAACGATCGGAGAA
AGCGACGTGTGTTCTGAGAAATGTCACTTCGCGATCACCGGCGCTTTGAG
TACTCTTGACCGCCATATGCGCCACGTGATTTGAAAGTAAAAAGAGTGGT
CACACGTAACGCAGTTTTGTTGAGTTGGCTTTTACCGTCCATGGATGACC
ATTACATAAGCAATGGATGCAAAGTCATCGGATATCGAGTCGACGTGGGT
TAGTCCCATCCAACTTTGTTGAAGAATATTCACACTCTTCACATGCTGCG
CACAATCATACGAGAGAAGAACATTTCCAAGGCACTGTACAAGTTGATGG
TATTTCTGCTCCATCATCAGACTGGACATCATCACCACAGACTGTCGCGA
CGAGACCAGCGTGATCATCAGCAGATCGTGAGTCGGGAACGAACCTTCAT
CACACTTTATGATTATGATCCTTACACTATGGGAACTACTGATCGACCTG
ATCTTCAACTCTCTCTAAAGAAAGGAGAGGTCATCACAGTTCTGGGTGAA
GTGGATATTGAAGGATATTTCACAGCTGTCATCAATGGACAGCAATTCAA
GGAAAGTGCAATTTGACTCGAAATCAAGCATCAAAAAGAAATAGATGAAC
GGCAAGAAAGGACTTGTTCCGTCCAATTTTATCGAACGCGTCAATCGGCG
TTCAACGCACAAGACATCTGCCACGTCATCGCGTCATTCGTCATCCATTC
GCTCTTCCCGTCACGTGACTAGTCACCATGACTCTTTTGTAGCATTATAT
GACTACGACCCCGTGAAGAGTTCACCGAACCCAAACCCTGCATTGGAATT
GTTGTTCCGTGAGGGTGACATGATGATCGTTTATGATAAAAGTCGAAGCG
ATGGATTCTACTCAGCGAAGGAGACAAACGAAACATTGGAGATGGAAGGT
GATCATGATGTGCTTTGGGTGAATGGTCAAAGAAAACAAGATGTGACAAA
CCCATCGTGTAACAAGGCCCTTATTGATGATGTCGATTTAGCAGGACGTG
TTGAGTTCAGTATTCAAACGATCGGAGAAAGCGACGTGTGTTCTGAGAAA
TGTCACTTCGCGATCACCGGCGCTTTGAGTACTCTTGACCGCCATATGCG
CCACGTGATTTGAAAGTAAAAAGAGTGGTCACACGTAACGCAGTTTTGTT
GAGTTGGCTTTTACCGTCCATGGATGACCATTACATAAGCAATGGATGCA
AAGTCATCGGATATCGAGTCGACGTGGGTTAGTCCCATCCAACTTTGTTG
AAGAATATTCACACTCTTCACATGCTGCGCACAATCATACGAGAGAAGAA
CATTTCCAAGGCACTGTACAAGTTGATGGTATTTCTGCTCCATCATCAGA
CTGGACATCATCACCACAGACTGTCGCGACGAGACCAGCGTGATCATCAG
CAGATCGTGAGTCGGGAACGAACCTTCATCACACTTTATGATTATGATCC
TTACACTATGGGAACTACTGATCGACCTGATCTTCAACTCTCTCTAAAGA
AAGGAGAGGTCATCACAGTTCTGGGTGAAGTGGATATTGAAGGATATTTC
ACAGCTGTCATCAATGGACAGCAATTCAAGGAAAGTGCAATTTGACTCGA
AATCAAGCATCAAAAAGAAATAGATGAACGGCAAGAAAGGACTTGTTCCG
TCCAATTTTATCGAACGCGTCAATCGGCGTTCAACGCACAAGACATCTGC
CACGTCATCGCGTCATTCGTCATCCATTCGCTCTTCCCGTCACGTGACTA
GTCACCATGACTCTTTTGTAGCATTATATGACTACGACCCCGTGAAGAGT
TCACCGAACCCAAACCCTGCATTGGAATTGTTGTTCCGTGAGGGTGACAT
GATGATCGTTTATGATAAAAGTCGAAGCGATGGATTCTACTCAGCGAAGG
AGACAAACGAAACATTGGAGATGGAAGGTGATCATGATGTGCTTTGGGTG
AATGGTCAAAGAAAACAAGATGTGACAAACCCATCGTGTAACAAGGCCCT
TATTGATGATGTCGATTTAGCAGGACGTGTTGAGTTCAGTATTCAAACGA
TCGGAGAAAGCGACGTGTGTTCTGAGAAATGTCACTTCGCGATCACCGGC
GCTTTGAGTACTCTTGACCGCCATATGCGCCACGTGATTTGAAAGTAAAA
AGAGTGGTCACACGTAACGCAGTTTTGTTGAGTTGGCTTTTACCGTCCAT
GGATGACCATTACATAAGCAATGGATGCAAAGTCATCGGATATCGAGTCG
ACGTGGGTTAGTCCCATCCAACTTTGTTGAAGAATATTCACACTCTTCAC
ATGCTGCGCACAATCATACGAGAGAAGAACATTTCCAAGGCACTGTACAA
GTTGATGGTATTTCTGCTCCATCATCAGACTGGACATCATCACCACAGAC
TGTCGCGACGAGACCAGCGTGATCATCAGCAGATCGTGAGTCGGGAACGA
ACCTTCATCACACTTTATGATTATGATCCTTACACTATGGGAACTACTGA
TCGACCTGATCTTCAACTCTCTCTAAAGAAAGGAGAGGTCATCACAGTTC
TGGGTGAAGTGGATATTGAAGGATATTTCACAGCTGTCATCAATGGACAG
CAATTCAAGGAAAGTGCAATTTGACTCGAAATCAAGCATCAAAAAGAAAT
AGATGAACGGCAAGAAAGGACTTGTTCCGTCCAATTTTATCGAACGCGTC
AATCGGCGTTCAACGCACAAGACATCTGCCACGTCATCGCGTCATTCGTC
ATCCATTCGCTCTTCCCGTCACGTGACTAGTCACCATGACTCTTTTGTAG
CATTATATGACTACGACCCCGTGAAGAGTTCACCGAACCCAAACCCTGCA
TTGGAATTGTTGTTCCGTGAGGGTGACATGATGATCGTTTATGATAAAAG
TCGAAGCGATGGATTCTACTCAGCGAAGGAGACAAACGAAACATTGGAGA
TGGAAGGTGATCATGATGTGCTTTGGGTGAATGGTCAAAGAAAACAAGAT
GTGACAAACCCATCGTGTAACAAGGCCCTTATTGATGATGTCGATTTAGC
AGGACGTGTTGAGTTCAGTATTCAAACGATCGGAGAAAGCGACGTGTGTT
CTGAGAAATGTCACTTCGCGATCACCGGCGCTTTGAGTACTCTTGACCGC
CATATGCGCCACGTGATTTGAAAGTAAAAAGAGTGGTCACACGTAACGCA
GTTTTGTTGAGTTGGCTTTTACCGTCCATGGATGACCATTACATAAGCAA
TGGATGCAAAGTCATCGGATATCGAGTCGACGTGGGTTAGTCCCATCCAA
CTTTGTTGAAGAATATTCACACTCTTCACATGCTGCGCACAATCATACGA
GAGAAGAACATTTCCAAGGCACTGTACAAGTTGATGGTATTTCTGCTCCA
TCATCAGACTGGACATCATCACCACAGACTGTCGCGACGAGACCAGCGTG
ATCATCAGCAGATCGTGAGTCGGGAACGAACCTTCATCACACTTTATGAT
TATGATCCTTACACTATGGGAACTACTGATCGACCTGATCTTCAACTCTC
TCTAAAGAAAGGAGAGGTCATCACAGTTCTGGGTGAAGTGGATATTGAAG
GATATTTCACAGCTGTCATCAATGGACAGCAATTCAAGGAAAGTGCAATT
TGACTCGAAATCAAGCATCAAAAAGAAATAGATGAACGGCAAGAAAGGAC
TTGTTCCGTCCAATTTTATCGAACGCGTCAATCGGCGTTCAACGCACAAG
ACATCTGCCACGTCATCGCGTCATTCGTCATCCATTCGCTCTTCCCGTCA
CGTGACTAGTCACCATGACTCTTTTGTAGCATTATATGACTACGACCCCG
TGAAGAGTTCACCGAACCCAAACCCTGCATTGGAATTGTTGTTCCGTGAG
GGTGACATGATGATCGTTTATGATAAAAGTCGAAGCGATGGATTCTACTC
AGCGAAGGAGACAAACGAAACATTGGAGATGGAAGGTGATCATGATGTGC
TTTGGGTGAATGGTCAAAGAAAACAAGATGTGACAAACCCATCGTGTAAC
AAGGCCCTTATTGATGATGTCGATTTAGCAGGACGTGTTGAGTTCAGTAT
TCAAACGATCGGAGAAAGCGACGTGTGTTCTGAGAAATGTCACTTCGCGA
TCACCGGCGCTTTGAGTACTCTTGACCGCCATATGCGCCACGTGATTTGA
AAGTAAAAAGAGTGGTCACACGTAACGCAGTTTTGTTGAGTTGGCTTTTA
CCGTCCATGGATGACCATTACATAAGCAATGGATGCAAAGTCATCGGATA
TCGAGTCGACGTGGGTTAGTCCCATCCAACTTTGTTGAAGAATATTCACA
CTCTTCACATGCTGCGCACAATCATACGAGAGAAGAACATTTCCAAGGCA
CTGTACAAGTTGATGGTATTTCTGCTCCATCATCAGACTGGACATCATCA
CCACAGACTGTCGCGACGAGACCAGCGTGATCATCAGCAGATCGTGAGTC
GGGAACGAACCTTCATCACACTTTATGATTATGATCCTTACACTATGGGA
ACTACTGATCGACCTGATCTTCAACTCTCTCTAAAGAAAGGAGAGGTCAT
CACAGTTCTGGGTGAAGTGGATATTGAAGGATATTTCACAGCTGTCATCA
ATGGACAGCAATTCAAGGAAAGTGCAATTTGACTCGAAATCAAGCATCAA
AAAGAAATAGATGAACGGCAAGAAAGGACTTGTTCCGTCCAATTTTATCG
AACGCGTCAATCGGCGTTCAACGCACAAGACATCTGCCACGTCATCGCGT
CATTCGTCATCCATTCGCTCTTCCCGTCACGTGACTAGTCACCATGACTC
TTTTGTAGCATTATATGACTACGACCCCGTGAAGAGTTCACCGAACCCAA
ACCCTGCATTGGAATTGTTGTTCCGTGAGGGTGACATGATGATCGTTTAT
GATAAAAGTCGAAGCGATGGATTCTACTCAGCGAAGGAGACAAACGAAAC
ATTGGAGATGGAAGGTGATCATGATGTGCTTTGGGTGAATGGTCAAAGAA
AACAAGATGTGACAAACCCATCGTGTAACAAGGCCCTTATTGATGATGTC
GATTTAGCAGGACGTGTTGAGTTCAGTATTCAAACGATCGGAGAAAGCGA
CGTGTGTTCTGAGAAATGTCACTTCGCGATCACCGGCGCTTTGAGTACTC
TTGACCGCCATATGCGCCACGTGATTTGAAAGTAAAAAGAGTGGTCACAC
GTAACGCAGTTTTGTTGAGTTGGCTTTTACCGTCCATGGATGACCATTAC
ATAAGCAATGGATGCAAAGTCATCGGATATCGAGTCGACGTGGGTTAGTC
CCATCCAACTTTGTTGAAGAATATTCACACTCTTCACATGCTGCGCACAA
TCATACGAGAGAAGAACATTTCCAAGGCACTGTACAAGTTGATGGTATTT
CTGCTCCATCATCAGACTGGACATCATCACCACAGACTGTCGCGACGAGA
CCAGCGTGATCATCAGCAGATCGTGAGTCGGGAACGAACCTTCATCACAC
TTTATGATTATGATCCTTACACTATGGGAACTACTGATCGACCTGATCTT
CAACTCTCTCTAAAGAAAGGAGAGGTCATCACAGTTCTGGGTGAAGTGGA
TATTGAAGGATATTTCACAGCTGTCATCAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044326XLOC_044326Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071325-exon-scaffold_60-1575043694:126943..127171TCONS_00071325-exon-scaffold_60-1575043694:126943..127171Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1575043694:126480..126599TCONS_00071325-exon-scaffold_60-1575043694:126480..126599Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1575043694:125505..125635TCONS_00071325-exon-scaffold_60-1575043694:125505..125635Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1575043694:124921..125094TCONS_00071325-exon-scaffold_60-1575043694:124921..125094Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1575043694:124469..124510TCONS_00071325-exon-scaffold_60-1575043694:124469..124510Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1575043694:124172..124306TCONS_00071325-exon-scaffold_60-1575043694:124172..124306Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1575043694:123778..123918TCONS_00071325-exon-scaffold_60-1575043694:123778..123918Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1575043694:122853..123501TCONS_00071325-exon-scaffold_60-1575043694:122853..123501Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1510915933:126943..127171TCONS_00071325-exon-scaffold_60-1510915933:126943..127171Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1510915933:126480..126599TCONS_00071325-exon-scaffold_60-1510915933:126480..126599Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1510915933:125505..125635TCONS_00071325-exon-scaffold_60-1510915933:125505..125635Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1510915933:124921..125094TCONS_00071325-exon-scaffold_60-1510915933:124921..125094Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1510915933:124469..124510TCONS_00071325-exon-scaffold_60-1510915933:124469..124510Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1510915933:124172..124306TCONS_00071325-exon-scaffold_60-1510915933:124172..124306Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1510915933:123778..123918TCONS_00071325-exon-scaffold_60-1510915933:123778..123918Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1510915933:122853..123501TCONS_00071325-exon-scaffold_60-1510915933:122853..123501Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1491911889:126943..127171TCONS_00071325-exon-scaffold_60-1491911889:126943..127171Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1491911889:126480..126599TCONS_00071325-exon-scaffold_60-1491911889:126480..126599Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1491911889:125505..125635TCONS_00071325-exon-scaffold_60-1491911889:125505..125635Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1491911889:124921..125094TCONS_00071325-exon-scaffold_60-1491911889:124921..125094Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1491911889:124469..124510TCONS_00071325-exon-scaffold_60-1491911889:124469..124510Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1491911889:124172..124306TCONS_00071325-exon-scaffold_60-1491911889:124172..124306Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1491911889:123778..123918TCONS_00071325-exon-scaffold_60-1491911889:123778..123918Clytia hemisphaericaexon
TCONS_00071325-exon-scaffold_60-1491911889:122853..123501TCONS_00071325-exon-scaffold_60-1491911889:122853..123501Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071325-proteinTCONS_00071325-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:122853..127171 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.68847	2.49917	1.93452	1.47513	0.914859	0.214203	3.06881	4.6875	3.303	1.86207	5.09118	2.40965	30.1623	25.6665	18.4619	32.7655	19.8616	21.4401	3.33867	3.24213	20.4305	22.5374	14.4332	17.3125	20.6371	24.413	4.68555	1.98551	1.11551	1.2786
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR011511SH3_2
IPR003961FN3_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071325 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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