TCONS_00071308 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071308
Unique NameTCONS_00071308
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1732

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071308 ID=TCONS_00071308|Name=TCONS_00071308|organism=Clytia hemisphaerica|type=transcript|length=1732bp
tttagcttttataaaagtagaaatttataaaaaagaaaaggaagattTGT
CGAAGACCAAAATAATAATGGATGTAAACATATCAGAAAATGTCCTTGAA
AAATTAAGTAATCTTTACAAGTTGAAAAAGgatgaagttaagaaaattct
ttcaacaccACCTCAATCAGCAGTTATAAGGGTcaatataaatttgataa
atataAATGATGCTATTGAAGTTTGCAAATCCTTTTTAAAGAACTGTGAC
ACTCATTACTCTGTCAAAATTCATCCACAAATCAAAGATGCATTGATCAT
TGAACCAAAGAACTTTGAAAACAAACCAGAACCACTACAGAAAGAAATCA
TTGTTGATTCTAGTTGTGGTACAGCTGTTCTTAGAGGAGCTGATATCTTT
GTACCTGGAGTATTAGCAGCAAATTCAAATGTTGTTGCTGGCGATCTTGT
TTCTGTATATTGTGACGTAAAAAAGAAATGTCGAAAAGGATTTACAAAAC
ATTTTGATGGTGAAAAATTCTATCTTGGTAATGGTAAAGCCCTATTCAGT
CGTTGGCAattatttgaagaaaatgatgTCGACAAAAATGATGTTTGTGG
TGTTGCAATAAAGATGGGTGAAAGTAAATTCAATTTACCAAGTTTTCACA
ACTTGCAACCAGATTTGTTTTTCCCACAAAACCTACCCTCCATAATAGTT
GGTCATTTGCTAGACATTGAAGAAAATGATTTGGTATTAGACATGTGTGC
TGCACCAGGAGGGAAAACATCACACTTGGCTACATTATTGAGAAAGgGCA
AACTAATATCAATagacaaaacacaaaataagGTGGATAGAATCAAAGAA
AATCTCCGGAAACTCAAATTGAATAATGTTGAATGTCATTGTTATGATAG
CACGAAGATCCTATGCAATGAAGATGAAAatgaaagtgacgaaaatggcC
CACCATTTCCATCATCTACATTTGATCGGATTCTTCTTGATCCACCTTGT
AGTGGTTTGGGACAAAGACCACAATTACGTTACACATTCAGTGATAAAGA
ACTGGCTTCTTATccaattcttcaaaagaaattcttcaaacAGGCAGTTC
CATTACTGAAAACTGGCGGGACACTTGTTTTTTCAACTTGTACTTTATGT
CCAGAAGAAAATGAAGCTCAAGTTGCTTGGGCATTACAATCGTTTTCTGA
TTTGTCACTGGTTGAACAAGAAATACGGATAGGAAGCATTGGTTTGGCAG
GTTATGGTCTTTCAGATGAACAACGAGAAAAAGTGCAGCGGTTTGATGCT
GTTTTTAACAACTATACAAGAACTGATATTTATAATGACTCTATTGGGTT
TTTCATAGCTAAATTTGTTAAGAGGGAAAGATGACAAAAACTAAAGATAT
TTGTTCTTAATTTAATCGTACTCAAAATTGTGTAACCATTCAAAAATGAA
CATGAACATTTATGATGTCTGGTATATGCAAGGCAGTTTTAGTCGAATTG
CTTATCAAATAAGTATTTACGTATGaatgaaattcagaaaaaataaaacg
AATTGGTTCAATAACTATTTACATTACATTTTGCGATGataccaacaaaa
acaacaacaaaaatttttgaataattacATATTGCTTCTTAACATTTCAC
TTCTTGGGTGATGTTTTGGTGTTTTCGTCACTTGGAGGTGAATGAAGACG
CGCAACTTCTGAATCTGATGTCTAGAAGAATA
Run BLAST on NCBI

protein sequence of TCONS_00071308-protein

>TCONS_00071308-protein ID=TCONS_00071308-protein|Name=TCONS_00071308-protein|organism=Clytia hemisphaerica|type=polypeptide|length=460bp
LAFIKVEIYKKEKEDLSKTKIIMDVNISENVLEKLSNLYKLKKDEVKKIL
STPPQSAVIRVNINLININDAIEVCKSFLKNCDTHYSVKIHPQIKDALII
EPKNFENKPEPLQKEIIVDSSCGTAVLRGADIFVPGVLAANSNVVAGDLV
SVYCDVKKKCRKGFTKHFDGEKFYLGNGKALFSRWQLFEENDVDKNDVCG
VAIKMGESKFNLPSFHNLQPDLFFPQNLPSIIVGHLLDIEENDLVLDMCA
APGGKTSHLATLLRKGKLISIDKTQNKVDRIKENLRKLKLNNVECHCYDS
TKILCNEDENESDENGPPFPSSTFDRILLDPPCSGLGQRPQLRYTFSDKE
LASYPILQKKFFKQAVPLLKTGGTLVFSTCTLCPEENEAQVAWALQSFSD
LSLVEQEIRIGSIGLAGYGLSDEQREKVQRFDAVFNNYTRTDIYNDSIGF
FIAKFVKRER
Run BLAST on NCBI

transcript from alignment at scaffold_60:1596702..1602772+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071308 ID=TCONS_00071308|Name=TCONS_00071308|organism=Clytia hemisphaerica|type=transcript|length=6071bp|location=Sequence derived from alignment at scaffold_60:1596702..1602772+ (Clytia hemisphaerica)
tttagcttttataaaagtagaaatttataaaaaagaaaaggaagattTGT
CGAAGACCAAAATAATAATGGATGTAAACATATCAGAAAATGTCCTTGAA
AAATTAAGTAATCTTTACAAGTTGAAAAAGGTAcaattgattgattttta
aattttcttcatGAATTGTAGTCTGTTCCAAAAAGATTGGCAGTCTGTAC
TTTTTTAAACAACTTTTGCTTATCCAAATACACTTTTGAAATTAAAGCTT
TAGGAAATTATGAAATAAGAATTGTTAATTGACTACCCggtgtgccacaa
aaaagtttctctctttaatttttaacgttttcgagcactttctgaaagta
actattttattcaattgagcataacttttgatctaatgaatcgaatttat
taaatgacccatcaaaatttaagtctgtctttcttctttccaataaaata
ggaatagttcttttaaaatttttagattacgagaaatttagtttcaaaga
gagaaactttttttgtggcgcacccagTAGAAAATTCTTCTATTTTTTAT
CttaatttgcaaatttttcaaactgctCTCCAAAGCTTAAATCATAATCT
GCTTAAAATTACTTTTCCAAAGAGGTATtacttttgattgaatttttctt
CTCTCAAAAGTAATactcaaacaatttttttggaatagactttaatgtaa
tttttattttttcttattttcgtaGAATTTATGATCTattaattttcacc
aaatttgtACTAATTGctttaatgtttttattcgcatgtttttaattgtt
tcaggatgaagttaagaaaattctttcaacaccACCTCAATCAGCAGTTA
TAAGGGTcaatataaatttgataaatataAATGATGCTATTGAAGTTTGC
AAATCCTTTTTAAAGGTTAGTTTTTCTGAGACTCCTCTCAGCTTGTATTC
ATTTATTCTAAAGTCAGGTTAAGAGAAGTTTTCAGAAGCGGTCATTTGCC
TTGTAAAGGCagtaaactcaaaaagttgttTGTCAATTTTATGAAGGGag
ctttttcttgatttttcagtaaaattttgctgaggctcagctggagactt
caaaaattatccaattttgttgaaatttttgcACACATGATCCTTGGGTG
AAtctctgggggtgtttttttcattttttcaaaattctcatttttaaggC
AGTGGTCACAatatttcgccaaaacgaggctaaaactttgtggcaggctg
gagacttcaaaaatagtaggatttggctgaaattttgcacacttgttcct
tgagtGAATACCTGGgggttttttaaaagttttccattttaagggcgtgg
tcacaataattctccaaaacgaggctaaaactttggggtaggctggagac
ttcaaaaatagtcggatttggctgaaatttggcacacttgttccttgggt
gaatatctggggggtatttttcatgttttcaaaattttgatttttagggg
cGTGCTTACGCGTTTTAGCCTCAAAACAAGGCTAAAACCTATTTAAGAAA
TgctaaaattttaaaagctattaagtttacaattgtgCCTACAAacgatt
tcaaagatactgaagttgagccaatGCGGTTAGTACGTTCGACAGTTCTT
ATCTTTAAGGTGTAATTGAGGTATATTATTATACCCAAGTTTTACTACTT
CGAGCTTCATTgatcttataaaattgttcttaaatactatatatatcatt
ttttaaatgaaaaaaggtGGAATTTTCTCCAATTTCTTCACAACAGATAG
AAACATAAGATTGACCAAGActacatttttttcataattattggGAGCAA
GAaggagaaactttttttcaattagcAATCATTTCAGTTCTGCCTGTTCT
CCACCCTTTCTATATCTTTCTTATCTCTAAAGAATAGAAGAACTCAagaa
attttacctcaaaagaGGATAAATTATTTCTGGCACACCggtattaaaaa
attatttattccCTCTGTTTTTTAAGAACTGTGACACTCATTACTCTGTC
AAAATTCATCCACAAATCAAAGATGCATTGATCATTGAACCAAAGAACTT
TGAAAACAAACCAGAACCACTACAGAAAGAAATCATTGTTGATTCTAGTT
GTGGTACAGCTGTTCTTAGAGGAGCTGATATCTTTGTACCTGGAGTATTA
GCAGCAAATTCAAGTAAATTCTTATTGCTTCCGTTATGCATTTGAAATGT
ATTTTGAAATGTGTTTACTAGATattttttaaaacgatactgGTGTTTTA
ACATACTAATCACATTGATTAATTATATACTACCGAATTTTGAAGGCACT
AATTTCACAATATCAATATTCATGTTTATGTTATGAATTAAACCCTTATT
TGAAATACTGtcttttataactttttatacTTTTCAGATGTTGTTGCTGG
CGATCTTGTTTCTGTATATTGTGACGTAAAAAAGAAATGTCGAAAAGGAT
TTACAAAACATTTTGATGGTGAAAAATTCTATCTTGGTAATGGTAAAGCC
CTATTCAGTCGTTGGCAattatttgaagaaaatgatgTCGACAAAAATGA
TGTTTGGTAAATAATTTTGATTGCAATTTATTTAGCATCACAGCTCAATA
TTTCTGAGCTTGCTAACATTTTAGAGATTTCGGGGTCAGAATACCTGGTC
TGGCTTTGTATTTGCATTGCTTTTGGgattacaaaaattgaaaacatacC
AAAACTATGGCGCATTATCCTTGTAGTTTGATCccttttaccttattttg
atttcttttaattttgcttattcattttaacttttatattcAGTGGTGTT
GCAATAAAGATGGGTGAAAGTAAATTCAATTTACCAAGTTTTCACAACTT
GCAACCAGATTTGTTTTTCCCACAAAACCTACCCTCCATAATAGTTGGTC
ATTTGCTAGACATTGAAGAAAATGATTTGGTATTAGACATGTGTGCTGCA
CCAGGTAGGTAAAACCGCTCTCTCTATTCATACTGGACCATAACTATGCC
AATGTCAAGCTATTTCGAATGTCAAAATCTTCATTAAAGCTGGCACATAA
TTTCTATGTCAAAATATGAATTTATGCGTTTGTGTGGTCGTTCTTTATAC
AAATTTTAATGTAATACTTCGATTTTCGTAACGAGGGTGGTCATCAGAct
gagaaaagaaaaatcaaaatcacaaaTATCTAGCGTAAAAATTACCTTGT
TCTTTCTTTGTTGCTGAAAGATGATTGCCATTTATATATACTTGGTACAT
AAGTCAGTTCAGCAACAAGGGGCGAAACTGAGCTACTTATGTACCCTTAC
AATGTGTATGTCGGATGGAAATAGTTATTTAGGGGTGTGGCATTTGGTTG
ATGGATGCGTAGTAAGTGGTAGTTTTTACACTAGGTATGGATAGTGGTAG
TATTCGAGCATGTGTTTTGAGCCATTTCTATCAATGATCTTTACCATTGA
TTTTGTcgtatattttttctttggattggTTTCGCTAGTTTTGGGTTCAG
CTGTTAAACCTTTTATTTTAGAAAGGTGGGGTTTGGCCTTCATTAACAGT
TCTGCATTGCTTTCTTCATATTCCCTTGACATTTTAAAATTGTCTTTATG
TTTACGTTTTTATCGAAAGATTAAATATTCCACTTTTTTACAGGAGGGAA
AACATCACACTTGGCTACATTATTGAGAAAGGTAAATTCAGCACAATTTC
TTTTAGATCttggcaaaaatattttaaatgtgtttttcaaaagataatga
agTAGCCACAAATTCTTTAATGACTGTTCTgttaaaaacttaatttttta
tatcaattttaggGCAAACTAATATCAATagacaaaacacaaaataagGT
GGATAGAATCAAAGAAAATCTCCGGAAACTCAAATTGAATAATGTTGAAT
GTCATTGTTATGATAGCACGAAGATCCTATGCAATGAAGATGAAAGTAAG
ATCATGTAGATATTCTGAAACTCTTTTTTCACAATTGAATTGAGGCATTG
TTATATTTTTCTTGGACCCTTTAATGAGTATGAATTGAGTTAGGTAGAGA
AAAAACTTAATTAGTTATCGGGCACTAGCTCTGACCTCAATTGACAGATT
TGTCCTCAAAAATCATTGTCAGTTGAAGTCCAAAATTCCTGGGttggaaa
tgaagccacttatttcccatcccaAGCACGTGACTAAGCATGTTTtcaca
caaaatttctaaatgtgGGGAAATCCTAGCCAATCTTAAAGCTTTAGTTT
TGGTTGCTTGAGAAATgttgaagattcatctctagACCCTTCTAGGATCC
AAACTCAATGGTGGAAACATCTTTCTGGCTTGTCTTATGTATATAACTCT
TgatatgaaaaaatttcttctttttagatgaaagtgacgaaaatggcCCA
CCATTTCCATCATCTACATTTGATCGGATTCTTCTTGATCCACCTTGTAG
TGGTTTGGGACAAAGACCACAATTACGTTACACATTCAGTGATAAAGAAC
TGGCTTCTTATccaattcttcaaaagaaattcttcaaacAGGTAAATCTT
TGGATTAGTCTCAACTCTTATTTTTGAAATGTTAAGCTTGCTGGttctga
aaatgtttttaaaaagggTTAGTTGGTAGTTCctgattattttctttaat
cTCGGGGTCtgttgttttgaatttattctTATACCGTCAaatgctctaac
ttgggactacctgacaaaacatgggacggcaattcggccaccatttcacc
gaacctccaaagtcatttgatttgagttaaggaacggtatatttaaaaat
acacaatttctctttcgattttacagtcagtgaaaatacagaccagatat
gcaacagtcccatgtttcgaccaatcgtcccaagtaagagcagttgacgg
tactatGACTGATAAAACAGACGTATTAGATTGTTATCTAGCTTAAAGCT
GGAGTTTTTTTTAAGTTGACAGAAACCTTTCCTCGACCACTTCTTTTGTC
TCTTTAGGCAGTTCCATTACTGAAAACTGGCGGGACACTTGTTTTTTCAA
CTTGTACTTTATGTCCAGAAGAAAATGAAGCTCAAGTTGCTTGGGCATTA
CAATCGTTTTCTGATTTGTCACTGGTTGAACAAGTAAATGCTAAATTTTA
CtgaagcaaaaaagtttttatccaGAAAGTACTTTTCAAACCTTTGAAAC
CACTTTTGTGCCTCAAACTGACACTAATGGTTACTCAATTTCAATTTGGG
TCAATTTTTGATTAAATTGaataatttctttgaaaatgtttcgACTCATA
TTGAGAAGGGGTAGGATTAGGGTGTAATCAATGATTTTTGTTTGACCGGG
ATTGAGGAAGTGTTTATAAGCAGGAAGGGTATTATAAGGATCAGTGGTGG
TAACAGAGTGAGACAGGGCGCTCAAATACTCAAAACAGCTCAAAAAAAGT
TGTCTAGCCCTATCTAATTTTTTCATAATGACTAAAAGAAGCTCTTGTTT
AATTTCAGGAAATACGGATAGGAAGCATTGGTTTGGCAGGTTATGGTCTT
TCAGATGAACAACGAGAAAAAGTGCAGCGGTTTGATGCTGTTTTTAACAA
CTATACAAGAACTGATATTTATAATGACTCTATTGGGTTTTTCATAGCTA
AATTTGTTAAGAGGGAAAGATGACAAAAACTAAAGATATTTGTTCTTAAT
TTAATCGTACTCAAAATTGTGTAACCATTCAAAAATGAACATGAACATTT
ATGATGTCTGGTATATGCAAGGCAGTTTTAGTCGAATTGCTTATCAAATA
AGTATTTACGTATGaatgaaattcagaaaaaataaaacgAATTGGTTCAA
TAACTATTTACATTACATTTTGCGATGataccaacaaaaacaacaacaaa
aatttttgaataattacATATTGCTTCTTAACATTTCACTTCTTGGGTGA
TGTTTTGGTGTTTTCGTCACTTGGAGGTGAATGAAGACGCGCAACTTCTG
AATCTGATGTCTAGAAGAATA

Coding sequence (CDS) from alignment at scaffold_60:1596702..1602772+

>TCONS_00071308 ID=TCONS_00071308|Name=TCONS_00071308|organism=Clytia hemisphaerica|type=CDS|length=13830bp|location=Sequence derived from alignment at scaffold_60:1596702..1602772+ (Clytia hemisphaerica)
ttagcttttataaaagtagaaatttataaaaaagaaaaggaagattTGTC
GAAGACCAAAATAATAATGGATGTAAACATATCAGAAAATGTCCTTGAAA
AATTAAGTAATCTTTACAAGTTGAAAAAGgatgaagttaagaaaattctt
tcaacaccACCTCAATCAGCAGTTATAAGGGTcaatataaatttgataaa
tataAATGATGCTATTGAAGTTTGCAAATCCTTTTTAAAGAACTGTGACA
CTCATTACTCTGTCAAAATTCATCCACAAATCAAAGATGCATTGATCATT
GAACCAAAGAACTTTGAAAACAAACCAGAACCACTACAGAAAGAAATCAT
TGTTGATTCTAGTTGTGGTACAGCTGTTCTTAGAGGAGCTGATATCTTTG
TACCTGGAGTATTAGCAGCAAATTCAAATGTTGTTGCTGGCGATCTTGTT
TCTGTATATTGTGACGTAAAAAAGAAATGTCGAAAAGGATTTACAAAACA
TTTTGATGGTGAAAAATTCTATCTTGGTAATGGTAAAGCCCTATTCAGTC
GTTGGCAattatttgaagaaaatgatgTCGACAAAAATGATGTTTGTGGT
GTTGCAATAAAGATGGGTGAAAGTAAATTCAATTTACCAAGTTTTCACAA
CTTGCAACCAGATTTGTTTTTCCCACAAAACCTACCCTCCATAATAGTTG
GTCATTTGCTAGACATTGAAGAAAATGATTTGGTATTAGACATGTGTGCT
GCACCAGGAGGGAAAACATCACACTTGGCTACATTATTGAGAAAGgGCAA
ACTAATATCAATagacaaaacacaaaataagGTGGATAGAATCAAAGAAA
ATCTCCGGAAACTCAAATTGAATAATGTTGAATGTCATTGTTATGATAGC
ACGAAGATCCTATGCAATGAAGATGAAAatgaaagtgacgaaaatggcCC
ACCATTTCCATCATCTACATTTGATCGGATTCTTCTTGATCCACCTTGTA
GTGGTTTGGGACAAAGACCACAATTACGTTACACATTCAGTGATAAAGAA
CTGGCTTCTTATccaattcttcaaaagaaattcttcaaacAGGCAGTTCC
ATTACTGAAAACTGGCGGGACACTTGTTTTTTCAACTTGTACTTTATGTC
CAGAAGAAAATGAAGCTCAAGTTGCTTGGGCATTACAATCGTTTTCTGAT
TTGTCACTGGTTGAACAAGAAATACGGATAGGAAGCATTGGTTTGGCAGG
TTATGGTCTTTCAGATGAACAACGAGAAAAAGTGCAGCGGTTTGATGCTG
TTTTTAACAACTATACAAGAACTGATATTTATAATGACTCTATTGGGTTT
TTCATAGCTAAATTTGTTAAGAGGGAAAGATGAttagcttttataaaagt
agaaatttataaaaaagaaaaggaagattTGTCGAAGACCAAAATAATAA
TGGATGTAAACATATCAGAAAATGTCCTTGAAAAATTAAGTAATCTTTAC
AAGTTGAAAAAGgatgaagttaagaaaattctttcaacaccACCTCAATC
AGCAGTTATAAGGGTcaatataaatttgataaatataAATGATGCTATTG
AAGTTTGCAAATCCTTTTTAAAGAACTGTGACACTCATTACTCTGTCAAA
ATTCATCCACAAATCAAAGATGCATTGATCATTGAACCAAAGAACTTTGA
AAACAAACCAGAACCACTACAGAAAGAAATCATTGTTGATTCTAGTTGTG
GTACAGCTGTTCTTAGAGGAGCTGATATCTTTGTACCTGGAGTATTAGCA
GCAAATTCAAATGTTGTTGCTGGCGATCTTGTTTCTGTATATTGTGACGT
AAAAAAGAAATGTCGAAAAGGATTTACAAAACATTTTGATGGTGAAAAAT
TCTATCTTGGTAATGGTAAAGCCCTATTCAGTCGTTGGCAattatttgaa
gaaaatgatgTCGACAAAAATGATGTTTGTGGTGTTGCAATAAAGATGGG
TGAAAGTAAATTCAATTTACCAAGTTTTCACAACTTGCAACCAGATTTGT
TTTTCCCACAAAACCTACCCTCCATAATAGTTGGTCATTTGCTAGACATT
GAAGAAAATGATTTGGTATTAGACATGTGTGCTGCACCAGGAGGGAAAAC
ATCACACTTGGCTACATTATTGAGAAAGgGCAAACTAATATCAATagaca
aaacacaaaataagGTGGATAGAATCAAAGAAAATCTCCGGAAACTCAAA
TTGAATAATGTTGAATGTCATTGTTATGATAGCACGAAGATCCTATGCAA
TGAAGATGAAAatgaaagtgacgaaaatggcCCACCATTTCCATCATCTA
CATTTGATCGGATTCTTCTTGATCCACCTTGTAGTGGTTTGGGACAAAGA
CCACAATTACGTTACACATTCAGTGATAAAGAACTGGCTTCTTATccaat
tcttcaaaagaaattcttcaaacAGGCAGTTCCATTACTGAAAACTGGCG
GGACACTTGTTTTTTCAACTTGTACTTTATGTCCAGAAGAAAATGAAGCT
CAAGTTGCTTGGGCATTACAATCGTTTTCTGATTTGTCACTGGTTGAACA
AGAAATACGGATAGGAAGCATTGGTTTGGCAGGTTATGGTCTTTCAGATG
AACAACGAGAAAAAGTGCAGCGGTTTGATGCTGTTTTTAACAACTATACA
AGAACTGATATTTATAATGACTCTATTGGGTTTTTCATAGCTAAATTTGT
TAAGAGGGAAAGATGAttagcttttataaaagtagaaatttataaaaaag
aaaaggaagattTGTCGAAGACCAAAATAATAATGGATGTAAACATATCA
GAAAATGTCCTTGAAAAATTAAGTAATCTTTACAAGTTGAAAAAGgatga
agttaagaaaattctttcaacaccACCTCAATCAGCAGTTATAAGGGTca
atataaatttgataaatataAATGATGCTATTGAAGTTTGCAAATCCTTT
TTAAAGAACTGTGACACTCATTACTCTGTCAAAATTCATCCACAAATCAA
AGATGCATTGATCATTGAACCAAAGAACTTTGAAAACAAACCAGAACCAC
TACAGAAAGAAATCATTGTTGATTCTAGTTGTGGTACAGCTGTTCTTAGA
GGAGCTGATATCTTTGTACCTGGAGTATTAGCAGCAAATTCAAATGTTGT
TGCTGGCGATCTTGTTTCTGTATATTGTGACGTAAAAAAGAAATGTCGAA
AAGGATTTACAAAACATTTTGATGGTGAAAAATTCTATCTTGGTAATGGT
AAAGCCCTATTCAGTCGTTGGCAattatttgaagaaaatgatgTCGACAA
AAATGATGTTTGTGGTGTTGCAATAAAGATGGGTGAAAGTAAATTCAATT
TACCAAGTTTTCACAACTTGCAACCAGATTTGTTTTTCCCACAAAACCTA
CCCTCCATAATAGTTGGTCATTTGCTAGACATTGAAGAAAATGATTTGGT
ATTAGACATGTGTGCTGCACCAGGAGGGAAAACATCACACTTGGCTACAT
TATTGAGAAAGgGCAAACTAATATCAATagacaaaacacaaaataagGTG
GATAGAATCAAAGAAAATCTCCGGAAACTCAAATTGAATAATGTTGAATG
TCATTGTTATGATAGCACGAAGATCCTATGCAATGAAGATGAAAatgaaa
gtgacgaaaatggcCCACCATTTCCATCATCTACATTTGATCGGATTCTT
CTTGATCCACCTTGTAGTGGTTTGGGACAAAGACCACAATTACGTTACAC
ATTCAGTGATAAAGAACTGGCTTCTTATccaattcttcaaaagaaattct
tcaaacAGGCAGTTCCATTACTGAAAACTGGCGGGACACTTGTTTTTTCA
ACTTGTACTTTATGTCCAGAAGAAAATGAAGCTCAAGTTGCTTGGGCATT
ACAATCGTTTTCTGATTTGTCACTGGTTGAACAAGAAATACGGATAGGAA
GCATTGGTTTGGCAGGTTATGGTCTTTCAGATGAACAACGAGAAAAAGTG
CAGCGGTTTGATGCTGTTTTTAACAACTATACAAGAACTGATATTTATAA
TGACTCTATTGGGTTTTTCATAGCTAAATTTGTTAAGAGGGAAAGATGAt
tagcttttataaaagtagaaatttataaaaaagaaaaggaagattTGTCG
AAGACCAAAATAATAATGGATGTAAACATATCAGAAAATGTCCTTGAAAA
ATTAAGTAATCTTTACAAGTTGAAAAAGgatgaagttaagaaaattcttt
caacaccACCTCAATCAGCAGTTATAAGGGTcaatataaatttgataaat
ataAATGATGCTATTGAAGTTTGCAAATCCTTTTTAAAGAACTGTGACAC
TCATTACTCTGTCAAAATTCATCCACAAATCAAAGATGCATTGATCATTG
AACCAAAGAACTTTGAAAACAAACCAGAACCACTACAGAAAGAAATCATT
GTTGATTCTAGTTGTGGTACAGCTGTTCTTAGAGGAGCTGATATCTTTGT
ACCTGGAGTATTAGCAGCAAATTCAAATGTTGTTGCTGGCGATCTTGTTT
CTGTATATTGTGACGTAAAAAAGAAATGTCGAAAAGGATTTACAAAACAT
TTTGATGGTGAAAAATTCTATCTTGGTAATGGTAAAGCCCTATTCAGTCG
TTGGCAattatttgaagaaaatgatgTCGACAAAAATGATGTTTGTGGTG
TTGCAATAAAGATGGGTGAAAGTAAATTCAATTTACCAAGTTTTCACAAC
TTGCAACCAGATTTGTTTTTCCCACAAAACCTACCCTCCATAATAGTTGG
TCATTTGCTAGACATTGAAGAAAATGATTTGGTATTAGACATGTGTGCTG
CACCAGGAGGGAAAACATCACACTTGGCTACATTATTGAGAAAGgGCAAA
CTAATATCAATagacaaaacacaaaataagGTGGATAGAATCAAAGAAAA
TCTCCGGAAACTCAAATTGAATAATGTTGAATGTCATTGTTATGATAGCA
CGAAGATCCTATGCAATGAAGATGAAAatgaaagtgacgaaaatggcCCA
CCATTTCCATCATCTACATTTGATCGGATTCTTCTTGATCCACCTTGTAG
TGGTTTGGGACAAAGACCACAATTACGTTACACATTCAGTGATAAAGAAC
TGGCTTCTTATccaattcttcaaaagaaattcttcaaacAGGCAGTTCCA
TTACTGAAAACTGGCGGGACACTTGTTTTTTCAACTTGTACTTTATGTCC
AGAAGAAAATGAAGCTCAAGTTGCTTGGGCATTACAATCGTTTTCTGATT
TGTCACTGGTTGAACAAGAAATACGGATAGGAAGCATTGGTTTGGCAGGT
TATGGTCTTTCAGATGAACAACGAGAAAAAGTGCAGCGGTTTGATGCTGT
TTTTAACAACTATACAAGAACTGATATTTATAATGACTCTATTGGGTTTT
TCATAGCTAAATTTGTTAAGAGGGAAAGATGAttagcttttataaaagta
gaaatttataaaaaagaaaaggaagattTGTCGAAGACCAAAATAATAAT
GGATGTAAACATATCAGAAAATGTCCTTGAAAAATTAAGTAATCTTTACA
AGTTGAAAAAGgatgaagttaagaaaattctttcaacaccACCTCAATCA
GCAGTTATAAGGGTcaatataaatttgataaatataAATGATGCTATTGA
AGTTTGCAAATCCTTTTTAAAGAACTGTGACACTCATTACTCTGTCAAAA
TTCATCCACAAATCAAAGATGCATTGATCATTGAACCAAAGAACTTTGAA
AACAAACCAGAACCACTACAGAAAGAAATCATTGTTGATTCTAGTTGTGG
TACAGCTGTTCTTAGAGGAGCTGATATCTTTGTACCTGGAGTATTAGCAG
CAAATTCAAATGTTGTTGCTGGCGATCTTGTTTCTGTATATTGTGACGTA
AAAAAGAAATGTCGAAAAGGATTTACAAAACATTTTGATGGTGAAAAATT
CTATCTTGGTAATGGTAAAGCCCTATTCAGTCGTTGGCAattatttgaag
aaaatgatgTCGACAAAAATGATGTTTGTGGTGTTGCAATAAAGATGGGT
GAAAGTAAATTCAATTTACCAAGTTTTCACAACTTGCAACCAGATTTGTT
TTTCCCACAAAACCTACCCTCCATAATAGTTGGTCATTTGCTAGACATTG
AAGAAAATGATTTGGTATTAGACATGTGTGCTGCACCAGGAGGGAAAACA
TCACACTTGGCTACATTATTGAGAAAGgGCAAACTAATATCAATagacaa
aacacaaaataagGTGGATAGAATCAAAGAAAATCTCCGGAAACTCAAAT
TGAATAATGTTGAATGTCATTGTTATGATAGCACGAAGATCCTATGCAAT
GAAGATGAAAatgaaagtgacgaaaatggcCCACCATTTCCATCATCTAC
ATTTGATCGGATTCTTCTTGATCCACCTTGTAGTGGTTTGGGACAAAGAC
CACAATTACGTTACACATTCAGTGATAAAGAACTGGCTTCTTATccaatt
cttcaaaagaaattcttcaaacAGGCAGTTCCATTACTGAAAACTGGCGG
GACACTTGTTTTTTCAACTTGTACTTTATGTCCAGAAGAAAATGAAGCTC
AAGTTGCTTGGGCATTACAATCGTTTTCTGATTTGTCACTGGTTGAACAA
GAAATACGGATAGGAAGCATTGGTTTGGCAGGTTATGGTCTTTCAGATGA
ACAACGAGAAAAAGTGCAGCGGTTTGATGCTGTTTTTAACAACTATACAA
GAACTGATATTTATAATGACTCTATTGGGTTTTTCATAGCTAAATTTGTT
AAGAGGGAAAGATGAttagcttttataaaagtagaaatttataaaaaaga
aaaggaagattTGTCGAAGACCAAAATAATAATGGATGTAAACATATCAG
AAAATGTCCTTGAAAAATTAAGTAATCTTTACAAGTTGAAAAAGgatgaa
gttaagaaaattctttcaacaccACCTCAATCAGCAGTTATAAGGGTcaa
tataaatttgataaatataAATGATGCTATTGAAGTTTGCAAATCCTTTT
TAAAGAACTGTGACACTCATTACTCTGTCAAAATTCATCCACAAATCAAA
GATGCATTGATCATTGAACCAAAGAACTTTGAAAACAAACCAGAACCACT
ACAGAAAGAAATCATTGTTGATTCTAGTTGTGGTACAGCTGTTCTTAGAG
GAGCTGATATCTTTGTACCTGGAGTATTAGCAGCAAATTCAAATGTTGTT
GCTGGCGATCTTGTTTCTGTATATTGTGACGTAAAAAAGAAATGTCGAAA
AGGATTTACAAAACATTTTGATGGTGAAAAATTCTATCTTGGTAATGGTA
AAGCCCTATTCAGTCGTTGGCAattatttgaagaaaatgatgTCGACAAA
AATGATGTTTGTGGTGTTGCAATAAAGATGGGTGAAAGTAAATTCAATTT
ACCAAGTTTTCACAACTTGCAACCAGATTTGTTTTTCCCACAAAACCTAC
CCTCCATAATAGTTGGTCATTTGCTAGACATTGAAGAAAATGATTTGGTA
TTAGACATGTGTGCTGCACCAGGAGGGAAAACATCACACTTGGCTACATT
ATTGAGAAAGgGCAAACTAATATCAATagacaaaacacaaaataagGTGG
ATAGAATCAAAGAAAATCTCCGGAAACTCAAATTGAATAATGTTGAATGT
CATTGTTATGATAGCACGAAGATCCTATGCAATGAAGATGAAAatgaaag
tgacgaaaatggcCCACCATTTCCATCATCTACATTTGATCGGATTCTTC
TTGATCCACCTTGTAGTGGTTTGGGACAAAGACCACAATTACGTTACACA
TTCAGTGATAAAGAACTGGCTTCTTATccaattcttcaaaagaaattctt
caaacAGGCAGTTCCATTACTGAAAACTGGCGGGACACTTGTTTTTTCAA
CTTGTACTTTATGTCCAGAAGAAAATGAAGCTCAAGTTGCTTGGGCATTA
CAATCGTTTTCTGATTTGTCACTGGTTGAACAAGAAATACGGATAGGAAG
CATTGGTTTGGCAGGTTATGGTCTTTCAGATGAACAACGAGAAAAAGTGC
AGCGGTTTGATGCTGTTTTTAACAACTATACAAGAACTGATATTTATAAT
GACTCTATTGGGTTTTTCATAGCTAAATTTGTTAAGAGGGAAAGATGAtt
agcttttataaaagtagaaatttataaaaaagaaaaggaagattTGTCGA
AGACCAAAATAATAATGGATGTAAACATATCAGAAAATGTCCTTGAAAAA
TTAAGTAATCTTTACAAGTTGAAAAAGgatgaagttaagaaaattctttc
aacaccACCTCAATCAGCAGTTATAAGGGTcaatataaatttgataaata
taAATGATGCTATTGAAGTTTGCAAATCCTTTTTAAAGAACTGTGACACT
CATTACTCTGTCAAAATTCATCCACAAATCAAAGATGCATTGATCATTGA
ACCAAAGAACTTTGAAAACAAACCAGAACCACTACAGAAAGAAATCATTG
TTGATTCTAGTTGTGGTACAGCTGTTCTTAGAGGAGCTGATATCTTTGTA
CCTGGAGTATTAGCAGCAAATTCAAATGTTGTTGCTGGCGATCTTGTTTC
TGTATATTGTGACGTAAAAAAGAAATGTCGAAAAGGATTTACAAAACATT
TTGATGGTGAAAAATTCTATCTTGGTAATGGTAAAGCCCTATTCAGTCGT
TGGCAattatttgaagaaaatgatgTCGACAAAAATGATGTTTGTGGTGT
TGCAATAAAGATGGGTGAAAGTAAATTCAATTTACCAAGTTTTCACAACT
TGCAACCAGATTTGTTTTTCCCACAAAACCTACCCTCCATAATAGTTGGT
CATTTGCTAGACATTGAAGAAAATGATTTGGTATTAGACATGTGTGCTGC
ACCAGGAGGGAAAACATCACACTTGGCTACATTATTGAGAAAGgGCAAAC
TAATATCAATagacaaaacacaaaataagGTGGATAGAATCAAAGAAAAT
CTCCGGAAACTCAAATTGAATAATGTTGAATGTCATTGTTATGATAGCAC
GAAGATCCTATGCAATGAAGATGAAAatgaaagtgacgaaaatggcCCAC
CATTTCCATCATCTACATTTGATCGGATTCTTCTTGATCCACCTTGTAGT
GGTTTGGGACAAAGACCACAATTACGTTACACATTCAGTGATAAAGAACT
GGCTTCTTATccaattcttcaaaagaaattcttcaaacAGGCAGTTCCAT
TACTGAAAACTGGCGGGACACTTGTTTTTTCAACTTGTACTTTATGTCCA
GAAGAAAATGAAGCTCAAGTTGCTTGGGCATTACAATCGTTTTCTGATTT
GTCACTGGTTGAACAAGAAATACGGATAGGAAGCATTGGTTTGGCAGGTT
ATGGTCTTTCAGATGAACAACGAGAAAAAGTGCAGCGGTTTGATGCTGTT
TTTAACAACTATACAAGAACTGATATTTATAATGACTCTATTGGGTTTTT
CATAGCTAAATTTGTTAAGAGGGAAAGATGAttagcttttataaaagtag
aaatttataaaaaagaaaaggaagattTGTCGAAGACCAAAATAATAATG
GATGTAAACATATCAGAAAATGTCCTTGAAAAATTAAGTAATCTTTACAA
GTTGAAAAAGgatgaagttaagaaaattctttcaacaccACCTCAATCAG
CAGTTATAAGGGTcaatataaatttgataaatataAATGATGCTATTGAA
GTTTGCAAATCCTTTTTAAAGAACTGTGACACTCATTACTCTGTCAAAAT
TCATCCACAAATCAAAGATGCATTGATCATTGAACCAAAGAACTTTGAAA
ACAAACCAGAACCACTACAGAAAGAAATCATTGTTGATTCTAGTTGTGGT
ACAGCTGTTCTTAGAGGAGCTGATATCTTTGTACCTGGAGTATTAGCAGC
AAATTCAAATGTTGTTGCTGGCGATCTTGTTTCTGTATATTGTGACGTAA
AAAAGAAATGTCGAAAAGGATTTACAAAACATTTTGATGGTGAAAAATTC
TATCTTGGTAATGGTAAAGCCCTATTCAGTCGTTGGCAattatttgaaga
aaatgatgTCGACAAAAATGATGTTTGTGGTGTTGCAATAAAGATGGGTG
AAAGTAAATTCAATTTACCAAGTTTTCACAACTTGCAACCAGATTTGTTT
TTCCCACAAAACCTACCCTCCATAATAGTTGGTCATTTGCTAGACATTGA
AGAAAATGATTTGGTATTAGACATGTGTGCTGCACCAGGAGGGAAAACAT
CACACTTGGCTACATTATTGAGAAAGgGCAAACTAATATCAATagacaaa
acacaaaataagGTGGATAGAATCAAAGAAAATCTCCGGAAACTCAAATT
GAATAATGTTGAATGTCATTGTTATGATAGCACGAAGATCCTATGCAATG
AAGATGAAAatgaaagtgacgaaaatggcCCACCATTTCCATCATCTACA
TTTGATCGGATTCTTCTTGATCCACCTTGTAGTGGTTTGGGACAAAGACC
ACAATTACGTTACACATTCAGTGATAAAGAACTGGCTTCTTATccaattc
ttcaaaagaaattcttcaaacAGGCAGTTCCATTACTGAAAACTGGCGGG
ACACTTGTTTTTTCAACTTGTACTTTATGTCCAGAAGAAAATGAAGCTCA
AGTTGCTTGGGCATTACAATCGTTTTCTGATTTGTCACTGGTTGAACAAG
AAATACGGATAGGAAGCATTGGTTTGGCAGGTTATGGTCTTTCAGATGAA
CAACGAGAAAAAGTGCAGCGGTTTGATGCTGTTTTTAACAACTATACAAG
AACTGATATTTATAATGACTCTATTGGGTTTTTCATAGCTAAATTTGTTA
AGAGGGAAAGATGAttagcttttataaaagtagaaatttataaaaaagaa
aaggaagattTGTCGAAGACCAAAATAATAATGGATGTAAACATATCAGA
AAATGTCCTTGAAAAATTAAGTAATCTTTACAAGTTGAAAAAGgatgaag
ttaagaaaattctttcaacaccACCTCAATCAGCAGTTATAAGGGTcaat
ataaatttgataaatataAATGATGCTATTGAAGTTTGCAAATCCTTTTT
AAAGAACTGTGACACTCATTACTCTGTCAAAATTCATCCACAAATCAAAG
ATGCATTGATCATTGAACCAAAGAACTTTGAAAACAAACCAGAACCACTA
CAGAAAGAAATCATTGTTGATTCTAGTTGTGGTACAGCTGTTCTTAGAGG
AGCTGATATCTTTGTACCTGGAGTATTAGCAGCAAATTCAAATGTTGTTG
CTGGCGATCTTGTTTCTGTATATTGTGACGTAAAAAAGAAATGTCGAAAA
GGATTTACAAAACATTTTGATGGTGAAAAATTCTATCTTGGTAATGGTAA
AGCCCTATTCAGTCGTTGGCAattatttgaagaaaatgatgTCGACAAAA
ATGATGTTTGTGGTGTTGCAATAAAGATGGGTGAAAGTAAATTCAATTTA
CCAAGTTTTCACAACTTGCAACCAGATTTGTTTTTCCCACAAAACCTACC
CTCCATAATAGTTGGTCATTTGCTAGACATTGAAGAAAATGATTTGGTAT
TAGACATGTGTGCTGCACCAGGAGGGAAAACATCACACTTGGCTACATTA
TTGAGAAAGgGCAAACTAATATCAATagacaaaacacaaaataagGTGGA
TAGAATCAAAGAAAATCTCCGGAAACTCAAATTGAATAATGTTGAATGTC
ATTGTTATGATAGCACGAAGATCCTATGCAATGAAGATGAAAatgaaagt
gacgaaaatggcCCACCATTTCCATCATCTACATTTGATCGGATTCTTCT
TGATCCACCTTGTAGTGGTTTGGGACAAAGACCACAATTACGTTACACAT
TCAGTGATAAAGAACTGGCTTCTTATccaattcttcaaaagaaattcttc
aaacAGGCAGTTCCATTACTGAAAACTGGCGGGACACTTGTTTTTTCAAC
TTGTACTTTATGTCCAGAAGAAAATGAAGCTCAAGTTGCTTGGGCATTAC
AATCGTTTTCTGATTTGTCACTGGTTGAACAAGAAATACGGATAGGAAGC
ATTGGTTTGGCAGGTTATGGTCTTTCAGATGAACAACGAGAAAAAGTGCA
GCGGTTTGATGCTGTTTTTAACAACTATACAAGAACTGATATTTATAATG
ACTCTATTGGGTTTTTCATAGCTAAATTTGTTAAGAGGGAAAGATGAtta
gcttttataaaagtagaaatttataaaaaagaaaaggaagattTGTCGAA
GACCAAAATAATAATGGATGTAAACATATCAGAAAATGTCCTTGAAAAAT
TAAGTAATCTTTACAAGTTGAAAAAGgatgaagttaagaaaattctttca
acaccACCTCAATCAGCAGTTATAAGGGTcaatataaatttgataaatat
aAATGATGCTATTGAAGTTTGCAAATCCTTTTTAAAGAACTGTGACACTC
ATTACTCTGTCAAAATTCATCCACAAATCAAAGATGCATTGATCATTGAA
CCAAAGAACTTTGAAAACAAACCAGAACCACTACAGAAAGAAATCATTGT
TGATTCTAGTTGTGGTACAGCTGTTCTTAGAGGAGCTGATATCTTTGTAC
CTGGAGTATTAGCAGCAAATTCAAATGTTGTTGCTGGCGATCTTGTTTCT
GTATATTGTGACGTAAAAAAGAAATGTCGAAAAGGATTTACAAAACATTT
TGATGGTGAAAAATTCTATCTTGGTAATGGTAAAGCCCTATTCAGTCGTT
GGCAattatttgaagaaaatgatgTCGACAAAAATGATGTTTGTGGTGTT
GCAATAAAGATGGGTGAAAGTAAATTCAATTTACCAAGTTTTCACAACTT
GCAACCAGATTTGTTTTTCCCACAAAACCTACCCTCCATAATAGTTGGTC
ATTTGCTAGACATTGAAGAAAATGATTTGGTATTAGACATGTGTGCTGCA
CCAGGAGGGAAAACATCACACTTGGCTACATTATTGAGAAAGgGCAAACT
AATATCAATagacaaaacacaaaataagGTGGATAGAATCAAAGAAAATC
TCCGGAAACTCAAATTGAATAATGTTGAATGTCATTGTTATGATAGCACG
AAGATCCTATGCAATGAAGATGAAAatgaaagtgacgaaaatggcCCACC
ATTTCCATCATCTACATTTGATCGGATTCTTCTTGATCCACCTTGTAGTG
GTTTGGGACAAAGACCACAATTACGTTACACATTCAGTGATAAAGAACTG
GCTTCTTATccaattcttcaaaagaaattcttcaaacAGGCAGTTCCATT
ACTGAAAACTGGCGGGACACTTGTTTTTTCAACTTGTACTTTATGTCCAG
AAGAAAATGAAGCTCAAGTTGCTTGGGCATTACAATCGTTTTCTGATTTG
TCACTGGTTGAACAAGAAATACGGATAGGAAGCATTGGTTTGGCAGGTTA
TGGTCTTTCAGATGAACAACGAGAAAAAGTGCAGCGGTTTGATGCTGTTT
TTAACAACTATACAAGAACTGATATTTATAATGACTCTATTGGGTTTTTC
ATAGCTAAATTTGTTAAGAGGGAAAGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044315XLOC_044315Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071308-proteinTCONS_00071308-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071308-exon-scaffold_60-1491911889:1596702..1596831TCONS_00071308-exon-scaffold_60-1491911889:1596702..1596831Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1510915933:1596702..1596831TCONS_00071308-exon-scaffold_60-1510915933:1596702..1596831Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1575043694:1596702..1596831TCONS_00071308-exon-scaffold_60-1575043694:1596702..1596831Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1491911889:1597506..1597616TCONS_00071308-exon-scaffold_60-1491911889:1597506..1597616Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1510915933:1597506..1597616TCONS_00071308-exon-scaffold_60-1510915933:1597506..1597616Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1575043694:1597506..1597616TCONS_00071308-exon-scaffold_60-1575043694:1597506..1597616Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1491911889:1598728..1598914TCONS_00071308-exon-scaffold_60-1491911889:1598728..1598914Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1510915933:1598728..1598914TCONS_00071308-exon-scaffold_60-1510915933:1598728..1598914Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1575043694:1598728..1598914TCONS_00071308-exon-scaffold_60-1575043694:1598728..1598914Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1491911889:1599139..1599307TCONS_00071308-exon-scaffold_60-1491911889:1599139..1599307Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1510915933:1599139..1599307TCONS_00071308-exon-scaffold_60-1510915933:1599139..1599307Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1575043694:1599139..1599307TCONS_00071308-exon-scaffold_60-1575043694:1599139..1599307Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1491911889:1599545..1599705TCONS_00071308-exon-scaffold_60-1491911889:1599545..1599705Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1510915933:1599545..1599705TCONS_00071308-exon-scaffold_60-1510915933:1599545..1599705Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1575043694:1599545..1599705TCONS_00071308-exon-scaffold_60-1575043694:1599545..1599705Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1491911889:1600395..1600432TCONS_00071308-exon-scaffold_60-1491911889:1600395..1600432Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1510915933:1600395..1600432TCONS_00071308-exon-scaffold_60-1510915933:1600395..1600432Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1575043694:1600395..1600432TCONS_00071308-exon-scaffold_60-1575043694:1600395..1600432Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1491911889:1600564..1600696TCONS_00071308-exon-scaffold_60-1491911889:1600564..1600696Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1510915933:1600564..1600696TCONS_00071308-exon-scaffold_60-1510915933:1600564..1600696Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1575043694:1600564..1600696TCONS_00071308-exon-scaffold_60-1575043694:1600564..1600696Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1491911889:1601129..1601292TCONS_00071308-exon-scaffold_60-1491911889:1601129..1601292Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1510915933:1601129..1601292TCONS_00071308-exon-scaffold_60-1510915933:1601129..1601292Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1575043694:1601129..1601292TCONS_00071308-exon-scaffold_60-1575043694:1601129..1601292Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1491911889:1601759..1601884TCONS_00071308-exon-scaffold_60-1491911889:1601759..1601884Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1510915933:1601759..1601884TCONS_00071308-exon-scaffold_60-1510915933:1601759..1601884Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1575043694:1601759..1601884TCONS_00071308-exon-scaffold_60-1575043694:1601759..1601884Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1491911889:1602260..1602772TCONS_00071308-exon-scaffold_60-1491911889:1602260..1602772Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1510915933:1602260..1602772TCONS_00071308-exon-scaffold_60-1510915933:1602260..1602772Clytia hemisphaericaexon
TCONS_00071308-exon-scaffold_60-1575043694:1602260..1602772TCONS_00071308-exon-scaffold_60-1575043694:1602260..1602772Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1596702..1602772 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.4576	8.51848	4.00906	3.25133	1.85343	1.52754	3.92968	4.40693	4.25631	4.3648	3.23328	3.38207	3.19122	3.99919	4.73384	5.20315	3.89965	4.36296	1.83244	2.12051	5.24776	4.58105	18.1346	13.9625	4.05169	6.00441	2.165	2.1476	7.702	9.694
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR023267RCMT
IPR002478PUA
IPR001678MeTrfase_RsmB/NOP2
IPR029063SAM-dependent_MTases
IPR015947PUA-like_domain
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0008168methyltransferase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003723 RNA binding
Blast
[Close]
BLAST of TCONS_00071308 vs. Swiss-Prot (Human)
Match: NSUN6 (Putative methyltransferase NSUN6 OS=Homo sapiens GN=NSUN6 PE=1 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 9.003e-102
Identity = 176/383 (45.95%), Postives = 239/383 (62.40%), Query Frame = 2 
Query:  272 HPQIKDALIIEPKNFENKPEPLQKEIIVDSSCGTAVLRGADIFVPGVLAANSNVVAGDLVSVYCDVKKKCRKGFTKHFDGEKFYLGNGKALFSRWQLFEENDVDKNDVCGVAIKMGESKFNLPSFHNLQPDLFFPQNLPSIIVGHLLDIEENDLVLDMCAAPGGKTSHLATLLR-KGKLISIDKTQNKVDRIKENLRKLKLNNVECHCYDSTKILCNEDENESDENGPPFPSSTFDRILLDPPCSGLGQRPQLRYTFSDKELASYPILQKKFFKQAVPLLKTGGTLVFSTCTLCPEENEAQVAWALQSFSDLSLVEQEIRIGSIGLAGYGLSDEQREKVQRFDAVFNNYTRTDI---------------YNDSIGFFIAKFVK 1372
            HP ++D L+I         +  Q E IV + CG AVLRGA ++ PG+++A+  + AGD++SVY D+K KC+KG  K FDG K +LGNG +  SR ++F        ++ G+ I+M E  +  PSF ++ P   F QNLPS +V H+L+ +  + +LD+CAAPGGKT+H+A L+  +G++I++DK  NKV++IK+N   L LN++   C+D TK +   D  E  E  PPF   +FDRILLD PCSG+GQRP +  T+S KE+ASY  LQ+K F  AV LLK  G LV+STCT+   ENE QVAWAL  F  L L  QE +IG  G+ G GLS EQ +++QRFD        TD+                 DSIGFFIAKFVK
Sbjct:   89 HPDLQDVLLIPVIGPRKNIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASQFMKAGDVISVYSDIKGKCKKG-AKEFDGTKVFLGNGISELSRKEIFS----GLPELKGMGIRMTEPVYLSPSFDSVLPRYLFLQNLPSALVSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAV-KLDMVEDTEGEPPFLPESFDRILLDAPCSGMGQRPNMACTWSVKEVASYQPLQRKLFTAAVQLLKPEGVLVYSTCTITLAENEEQVAWALTKFPCLQLQPQEPQIGGEGMRGAGLSCEQLKQLQRFDPSAVPLPDTDMDSLREARREDMLRLANKDSIGFFIAKFVK 465
The following BLAST results are available for this feature:
BLAST of TCONS_00071308 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NSUN69.003e-10245.95Putative methyltransferase NSUN6 OS=Homo sapiens G... [more]
back to top