TCONS_00071295 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071295
Unique NameTCONS_00071295
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3685

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071295 ID=TCONS_00071295|Name=TCONS_00071295|organism=Clytia hemisphaerica|type=transcript|length=3685bp
aaaaaaatgagcAACTTTTCTAAAACACTGATctttttagggttactttt
aaaAGGCTTCTTTAGCTTTCATAGACCAAAGATTTTCCCCTGCGGCGCCA
AATTACAAAAAGACTGTAATTCTTTGAGCCGAATCAATGTTCCTTCCgac
ttaaaaattcgaaatttccatgaagccaaagaaaatcaacagaTTGAAGT
CTAAGCATATAAATGAGCATTAATAAAATGAGATTTTAACTTTTCATTTG
CCTATGACCTATATAGattaggggtagaaaccaatcaagtagtcagacgg
ctgagaagtaagtgtgagacggtagatataagtttggcatgaaattatgg
ctaatcctcgaataataagttttggggaaaatttgtcccgataaatacaa
tattagtataaataaatgaggattgcctacaaccataactccagggaggg
agggagggaggtaaaaaatatttcatcctgtcagctttcagttagagcgT
CAACTTGAACAGGGAGTTGCAATAGCCATTATGAACATGACGTCACGTAC
GGTtattagcaaagtagactcaCTTGGCAGAGGGCGGCCACCCAGCCATT
CCAATACTGTggcgcttatcaaataaaagttaagcCGCGATTTAACCTGT
GTTAGATCCAGATTTTCTAAGCCTCAATccgattttcccgtatgcttcaa
aatcattttaattacaTAATTACTTAATTAGAGGTCGTTTTAATGGTGGT
GTCATTAAATTTGTCTCGCGAAACCTTTATTTGTGTGCAGAGTGCATTGT
TTATATACGTGTGTTTGCATGGTTGAGATAAGTATACTTTTGAATAGTTT
TGATAAAGGTTGCGGCTTGAATTTGGGTTTTTTTGAGTTTCTCATTGcaa
tatttaaagattttagaaatttgtAATTTTAAATCTCTTCTTTTAATGAA
AAGTCGAgacaaatatattgaaaaaaatgccAACTGCCAATTATTTAGGA
GTTTAGTTAGTCAAAAACAATTACTTGATTCATGAATCAAATTGAACATT
TTATGATGGTATCTTAGGCtgttttatgaaaatatttttaatgtaTAATT
TATTGCTTTTACTGTAAAATTTTATGATCGATTAGTAGTTATTTGTGGGT
CACACCACACCATGCTAATATCCAATATCCTAGATGAATTATCCATGTAT
TTgaactgtttttattttgtagataATATTATTAAATTATGCTTTCAGAA
GATTTTTGAATGTTGAATAGACGATAATTGaaaatgttGGAACTGGTTAT
CTATATTTTCACATCAATACTGGCATTGCTGCTTAGTTATCTTCTATATG
AACGAGTGACCAGCAAAACCAACCACATACCTCAACCATGGAGTTGGCCC
TTTCTCAAACATTATCcatattttgttgaaaaagaccATGTGAAATTATA
CGCTGATTTTGCAGAACCATTCCGAAAAGCTGGCAAAGAATTTTTTAGGG
TAAATAATCTATCACTTCCAGAACAAGTTGTTCTATTGAACccagaacat
ccaaaattggTTCTTGGTCGCCCAGATTTATTTGTCCGTTCAAGAGCACT
GAATGACGTCATTCCATTTTTTGAACACGGACTTCTAAACGTGAGAGGTG
ATCAGCATCGTCGACAAAAGAAATTGTTAAGTCAAGCTTTCACACCAGCA
ATGTTGAGCAAATATTTGGCAGCATCTAACAAAGTTGGAAATGATAAAAT
TCAGAAATGGCATGATTTAGCCAAACAACACACTGATGATACTATCCACG
CACCAGCAGCTCTTATCGACGTTTTAGCCGATTACACCGATATAGCATTT
ACAGTTGCTAGTAAATCATTGGTCTACATGCCTGAACAAGATTACCAAGA
GTTCACCAAAGCTTTATTAGGAGTTACGGATTTATTGAAAGATGGCACCT
TCTGGAAAGTCTTATTTGCAAAGATCCCTTTCGTTAAATATTTACCTTTT
GGTACTGATGGTGCACGACAGAAATCGATCAAAATGATTGATACTTCCAT
ACGCAAGGTTATCGAGAAAAAGAGGCAAATGATCATCAACAGTGAAGAAG
GTAGCGATGACAACGATCTTGTTGGAATTTGTATCCGTGGTCAATTAGAC
CAAAGTAAAATTGATGAAACACCTCTCACCGATCTGGAAATTCGTGATAA
TTTGGTGACGTTCCTGATTGGTGCTTTTGATACTACATCGTCCTGTTTGA
CATGGACAACTTATGCAATAGCAAAGCATCCAGATATCCAAAAGAAACTG
CGAGAGGAGATCAATCAAGTTGTAGAAGACTTTGATAACGTCACATACAC
AGATATCGCAAATCTCAAATACCTCGATATGGTGATCAAGGAATCATTGC
GTTACTATAATGCTTCTATTCGTGTTGGACGTCTTGCAGCTCAAGATTGC
CATATTGGTGATACATGGATTCCAAAAGGACAAATGATCAAAACAGTTTT
CAGTTTATTTCATATGAACGAAAAGACTTTTCCTGAACCAGAAAAATTTG
ATCCAGAAAGATTTCGTGAACCAGTCAAAATTGGTTCATGGCTTGCATTT
GGATACGGCCCGTACAGTTGCATTGGGAAGAAATTCGCGTTGAATGAGAT
TAAAACAGTTCTTGTTAAAGTGGTTGCAAATTTCCAACTCTCCTTGAAGA
ATGAACCGAAACTGAACCGAAGAATCAAAGTTGGTTTATTCAATGAAGAA
CCGATTCATGTTCTCATTCAACCAACAAAACGTCAAGAATAACAGACATA
TCATGTTTTATAATCATTTAATCGAATGTATAGTTGGTCAATGTCTTAAA
AAAATCATGTCATTGGTTTTCACTTCTTTAGCTTGATGAcggaaaatttt
aatatttcataTGATAGCTTGGATAGTGCATAATCTAAAAaattaggtat
tgtcattttctttaagaagccaattaaaattttaaaagtgcaaaaaatgt
tttggatGAATTTGATTCAAAGGATTAAATTCcaaagaattggaaatttt
tgtttacaggGGTTAACATTTATACGAAGTGTTTCCAGGAACAAAGAAAA
CGATTTAAAGAAAACGATTCATCCTCAACAAAAACCCGTTTTCAGCTTGC
AAAATTTACCAAGGTGATTGTTCTTGTGGTCAAATTTACATTGGTGAAAC
TAAACGATATACTGTCGCTACGGTGGTGTGAACACGAAAATGTCACTTTA
AAATCAGAGCCtgaaaaacatttaaattcCTACCCAAATCACAAATTCCA
ATGGAAAATTGTCCTCAATGCCCCAAAGAATTGGAGAACTCGTAAAAATC
TTGAAGCATCTTTTATTGCTATCAAGAACCCTGGACTTAATGATCAAAAT
TACTGCTTTTAGAAATGGAGTCACGTAGATATTTTatgcattttcttttg
tttttagaatgttttgaatcaattttaattactcccgaaaaaacttttta
gatgTAGATAGAAATTTGTGTAATCTGATAGAACTCTTGTATTTTTATAA
GCTTGAGAATGGTGATACCACCGAAGTATATTGCTTgactgtttttaaat
tttgaactttgaaaaatggcttcaaattataACACACGATTCATCATTGT
TACATTAAATATCGTCCAAAACAttataacctgag
Run BLAST on NCBI

transcript from alignment at scaffold_60:1174022..1182652+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071295 ID=TCONS_00071295|Name=TCONS_00071295|organism=Clytia hemisphaerica|type=transcript|length=8631bp|location=Sequence derived from alignment at scaffold_60:1174022..1182652+ (Clytia hemisphaerica)
aaaaaaatgagcAACTTTTCTAAAACACTGATctttttagggttactttt
aaaAGGCTTCTTTAGCTTTCATAGACCAAAGATTTTCCCCTGCGGCGCCA
AATTACAAAAAGACTGTAATTCTTTGAGCCGAATCAATGTTCCTTCCgac
ttaaaaattcgaaatttccatgaagccaaagaaaatcaacagaTTGAAGT
CTAAGCATATAAATGAGCATTAATAAAATGAGATTTTAACTTTTCATTTG
CCTATGACCTATATAGattaggggtagaaaccaatcaagtagtcagacgg
ctgagaagtaagtgtgagacggtagatataagtttggcatgaaattatgg
ctaatcctcgaataataagttttggggaaaatttgtcccgataaatacaa
tattagtataaataaatgaggattgcctacaaccataactccagggaggg
agggagggaggtaaaaaatatttcatcctgtcagctttcagttagagcgT
CAACTTGAACAGGGAGTTGCAATAGCCATTATGAACATGACGTCACGTAC
GGTtattagcaaagtagactcaCTTGGCAGAGGGCGGCCACCCAGCCATT
CCAATACTGTggcgcttatcaaataaaagttaagcCGCGATTTAACCTGT
GTTAGATCCAGATTTTCTAAGCCTCAATccgattttcccgtatgcttcaa
aatcattttaattacaTAATTACTTAATTAGAGGTCGTTTTAATGGTGGT
GTCATTAAATTTGTCTCGCGAAACCTTTATTTGTGTGCAGAGTGCATTGT
TTATATACGTGTGTTTGCATGGTTGAGATAAGTATACTTTTGAATAGTTT
TGATAAAGGTTGCGGCTTGAATTTGGGTTTTTTTGAGTTTCTCATTGcaa
tatttaaagattttagaaatttgtAATTTTAAATCTCTTCTTTTAATGAA
AAGTCGAgacaaatatattgaaaaaaatgccAACTGCCAATTATTTAGGA
GTTTAGTTAGTCAAAAACAATTACTTGATTCATGAATCAAATTGAACATT
TTATGATGGTATCTTAGGCtgttttatgaaaatatttttaatgtaTAATT
TATTGCTTTTACTGTAAAATTTTATGATCGATTAGTAGTTATTTGTGGGT
CACACCACACCATGCTAATATCCAATATCCTAGATGAATTATCCATGTAT
TTgaactgtttttattttgtagataATATTATTAAATTATGCTTTCAGAA
GATTTTTGAATGTTGAATAGACGATAATTGGTAAGATTTTTAACATTAAC
CCTGTGTCCCCTTTTTTCATCTCTTGAGTTTTGTGTAATTCGATACCAAT
CCGAAAGGATGAGGGAAATTcgacacaaaaaaatcacgagtgcagtTTTC
GGATTCTATAACTGTGTTGTTTATATCAATCGAGAGATGTATGATGCATG
TAATGGTGATACAAAATGATGTTACTCGAATATATGATGTTTGCttatta
aggccggtctccactttcgcgcgacatgagcgaaaacttttaacgttttt
gtaaggtcattggtcggttgaaaaatgaagcaatttcattaATAGAAATT
TATGTAACGGAttaaaaaagtagaacttccttcaactttttttttgttcg
cgcgaaacttttttatgacgtaatcttttcttcaggcaaaaaaggttagg
aaaaaaactgtcgcccatttcgcgcgaaagtggagtccGGCCTTTAGATT
CATTTTTAAATTccctaaaaagatttttttgcgtATCCAGCACTAGTTTA
AGGAGCCgtaaatttttaaatacaccttttcgacggTAGCCGCCAAATTC
CCCGCAGGCATTTTTTATCCGTTTTACCACcgtaaactcgatccaatcct
ttttttgaacctacttggaggtcctataaattaacctgtgttcgtccgtt
cgtctgttaccaacttttctcgagattgaatcatagaaattttgttattt
ttggtacaaatgtgcaaaatggtgatgaccaaaatgtgacggagcccgat
tttcgaaaaaattttcgggccaatttgggcccaaaaatagggtttcttgg
actttgtgaaacagACAAAAATTGCCCGTGCGACAATTGGCAATTAAACA
ACAATTAAATTAATGAAAGTATGGTAAATTTATATGATTTATAGAATAAT
TATATCATTAAATTCCATTTGTATAAAGCTTCGTTACGATGTTATCAATA
AATCCATGATGCGTTAGTAGCCTAGCAAAATAGATTGATATGAGAAAAAT
CATCACTTTTAAATCTCTATGAAATtctctttgaaaatttgatatttcaa
aggttttttgttgaaaaaatttaaacgaTAGAAAAAACTCAAATGTTTGA
TATCAAATGTTTGATAAGGTTAtgtttaatttatttatttatagagcctt
tttgagttttttgtcAGTACATTTATCGGTGAGCACaaagattttctgtt
ttgaattaaaattcTGGATATTTAATTAAAGTGCTGAAAACAATTTGGTG
ACTTTAGTAATCTAATAATTTTATTACAGTACTGGAAAAACCATTGATTC
AGGTCAGGACTTCTACTTTAGTGGACGAACGCCtgtgtaaaaaaaattgt
ctcgTAAGAACTGTTATTTTCtttatcaaagaaaatgttGGAACTGGTTA
TCTATATTTTCACATCAATACTGGCATTGCTGCTTAGTTATCTTCTATAT
GAACGAGTGACCAGCAAAACCAACCACATACCTCAACCATGGAGTTGGCC
CTTTCTCAAACATTATCcatattttgttgaaaaagaccATGTGAAATTAT
ACGCTGATTTTGCAGAACCATTCCGAAAAGCTGGCAAAGAATTTTTTAGG
GTAAATAATCTATCACGTGAGtaaaactattttattttaatagtaTAATT
TTATTTCTAAGTCATTTTTTCGTCGtattcttttcaaaatatgatgGAGC
ATCCTGACAGATACTCAGATGATTGCTTTCTATGAAAACACTAAATAACT
TTTCTAAACCCATTGTCATCTATCGCACTAcatgttttttcatttataag
aataacgtttataagcatatgcaggctcaggtTTGgatacctaaacaatg
gctcttttgtttgagaacaatagaatggtAAACATAATGAGAGTCTGATA
TAGGGGtaaacacttgcttataaataaaaacatgtattcCATCTACTATC
CCCACCGTaatatttggggaaattccttcaaaattttgaaactgcaagtg
atttttaagtgtcTGAAAGTACACTTGGAAAGTAGAGTATAAGTCTGAGT
TTTATCATGAGACTTACGAGTTTAGAATCTTAGGAACTAGAAGCACAAAA
ATGTTCCAAAGAGGCTGAGAATAGAGCCTGGACGCCACTTAACCCCTTCc
caatcgaaaaatccaatgaaacaaagtggaagtactgaaatctcaattct
cgcccgagctttaaattctgaaaaacgttcaaattaaattcccaaatatt
gtcaatatatttcggcaCCGATTGTAGTCTTACGCCTAAATCTCCTCTCG
CCAGAAGCATGTTTCTTTGCTTGGAgatattgatttttatttttgtgaaa
tatctAAGATCCCCGATCGGAGTTTATTTGACTCTTCCATGGAATCATTC
TTCGCAAACTTCCATTATTATTGTTTCTGTTTCTCTATTTCACCATATAG
TTCCAGAACAAGTTGTTCTATTGAACccagaacatccaaaattggTTCTT
GGTCGCCCAGATTTATTTGTCCGTTCAAGAGCACTGAATGACGTCATTCC
ATTTTTTGAACACGGACTTCTAAACGTGAGAGGTGATCAGCATCGTCGAC
AAAAGAAATTGTTAAGTCAAGCTTTCACACCAGCAATGTTGAGCAAATAT
TTGGCAGCATCTAACAAAGTTGGAAATGATAAAATTCAGGTATAAAGATT
GTATTTTTGGTGTTAGTTACACATttatttgttttataagaacattcaaa
atttttaagctttcggatattcttaacattttgggtctaaaagcttaaaa
atgctcttaacatgttcttatttataccatttttacccattttcctaaga
aatcgggtgttttcgagtctacaaagccttaaaatgttcttaacttgttc
ttaacatttttgccattgaAGCTTTGTtttcatatagtttgttcttataa
aaaacgtgtagttactAGCTGAACAATTCTCCTACTAAAAGTCTGTACCT
CAATATAAACTGCAGCGGTGACAAAAaaagctgtaacttttgatagattc
ATAATCAAATAGCGGTTTtgtgtttgttgaaaagatCAACAGGAGTGaaa
tattatgaaaataaaagaaatgaacGAAAATTggagaatgaaaaagaaaa
aagtgacaaattCCCCCCTTAACATATATAGAGCGGTtagttaaaatatt
tttcacgcCAAAAACTAAATTGTTTCACTCAACCCTTTCCGACTACtttg
gaaattttaaattactacactcccttctcacagacccgttaGGAcctctt
cccactggaaaaattggccaaaatataatcccagtggaaaattataccct
AATTTTTGTTCCCGCTGAAAATAACCTGATAAGTAAATCCTCActacaaa
atattatgctattttttccattccTACTGAACTTTTGGCTTGAAAACAAT
ataattcaaatccccagccgtAAAAAACATGGGAGTATCAATCTCCATca
atccgttatttttacctccAGTGGCTGAAAAAAATGCTACCAGATCTGTG
AGAGGGGGTGTATGACTGTAAGTCTAATTTTTAGAAATGGCATGATTTAG
CCAAACAACACACTGATGATACTATCCACGCACCAGCAGCTCTTATCGAC
GTTTTAGCCGATTACACCGATATAGCATTTACAGTTGCTAGTAAATCATT
GGTCTACATGCCTGAACAAGATTACCAAGAGTTCACCAAAGCTTTATTAG
GAGTTACGGATTTATTGAAAGATGGCACCTTCTGGAAAGTCTTATTTGCA
AAGATCCCTTTCGTTAAATATTTACCTTTTGGTACTGATGGTGCACGACA
GAAATCGATCAAAATGATTGATACTTCCATACGCAAGGTACAAAATTTTA
GCAGTAAAACTAGACATTTGATTAATTTACAACCCTGTTTGTTTCTCTAT
TTTTTCAGTTATGCTCTTGCTCAGTTTCACCTAGTCTCTAGAGGGTCAAG
TAGTTCAAATCTATAGCGCATTCCAAACATACTACAACCAGTgcaataat
atattggcaccaGCCTCAGAAAAACACTGGATTTACTCACTTCCCTCTCC
ATCAATCCCATCCCCCTTAATTTCAATGGTTGAAGAAGGCAACATGGCTG
CAAACTGAACCATTGAAGCTTGGGGAGAGTTGAAATAAGTTGTAACATCA
AAAATCAGTGTTTACTGCCAAATAATATTGCAGTGATATTTGTAGTATTT
GCAAATGTTAACAGAATAAGATACCATAACCCTTAGAAACCTCTTTACCA
ATTTAGGTTATCGAGAAAAAGAGGCAAATGATCATCAACAGTGAAGAAGG
TAGCGATGACAACGATCTTGTTGGAATTTGTATCCGTGGTCAATTAGACC
AAAGTAAAATTGATGAAACACCTCTCACCGATCTGGAAATTCGTGATAAT
TTGGTGACGTTCCTGATTGGTGCTTTTGATACTACATCGTCCTGTTTGAC
ATGGACAACTTATGCAATAGCAAAGGTTTGGCAATATTTTAAATGGTTTT
CAAGAGTTCAAATTTGGTTTACTGTTGGAatgatggattttttttttaaa
gaaagattctATAGAGATGAAtatcatttttatcttttgcACTTTTTGTA
AAGAGAATTTGAAAGCTTATCCTCGCGTCTAAAACAGTCGATCAATACAC
CAGTCTCAATAACTTTAAGAAAAAGGGGGatttaacaaatatttcttatt
taaaacCACATTAGTTTAACAATGCCATCCTTAGTTTGAAATTGGATAGG
GCACGGCGAAAGACCTCAGGCGAAAGCACATGGAGATAGAGCTGACTTTC
AAAGGTTTTGCTAGGTTGGATGGGCTGTTGATAATGAGAACAGTGCTCAG
AAGCTTACTTGTTTTGGGGCAAAAACGTACCCTTCAGTTTTGACTTCACC
AAAACTTTTCCCCAAAGTTTTCATCGTGAGGCTCTGAAGTTTTTTATTCG
GTGCCTAGAAAGCTTCCGTGGAATTTGTCACCTCTGTTCACATCTGCTTC
GTCATATTACTGCCAGACTAGAACCGCTTTGAATGATTGGGTGCTGCATG
GGTTGAATAAAAGTACGATAAATGGCCAAAATTAGAGAAAATCATGAACA
TTAAAACACACTTAACTTTTTATCAGCATCCAGATATCCAAAAGAAACTG
CGAGAGGAGATCAATCAAGTTGTAGAAGACTTTGATAACGTCACATACAC
AGATATCGCAAATCTCAAATACCTCGATATGGTGATCAAGGAATCATTGC
GTTACTATAATGCTTCTATTCGTGTTGGACGTCTTGCAGCTCAAGATTGC
CATATTGGTGATACATGGATTCCAAAAGGACAAATGATCAAAACAGTTTT
CAGTTTATTTCATATGAACGAAAAGACTTTTCCTGAACCAGAAAAATTTG
ATCCAGAAAGATTTCGTGAACCAGGTTAGTGGGAAAACATTACATTTTTG
TCTTGTAACATACaatgtgtccggaaaaaaacgGAACAGAATAAAGACTG
TACTtctttttttcggacacactgTATTGGTAATAAAGATAATGATGACA
AATAAATGAGATGATCGTCTATGATGGTTCATGCTTTGACCGCCATGGTG
GTGTACCCCGCTGAACTTCTTTGCTCTTGGCACACAACTTTTCCATTtcc
attttcgaaaatttttaattttccaccCGCTTTTtggtaattgtttattt
ttgttaatcTCATTGATTTAACAAAGAATCCTCAACCAATTATTTGCGAA
TTTGACCGATCACCTTATTGGAACCTTTTTCCAATGAAATTTTTGCACCC
TGTTGAATAGTAATTTCATAAACGCTTCATAAACGCTCCTTCTCGTGTTA
GTAGGTGGGCGTTGACCTCGTGAAATCGAAATAGTGATGTCTAAAAGTCT
TAGATTGTTTGGTCACTAACTTATCGACTCTATCTAACAGTAATATCCTA
GGTATATTTTTTAGCGAGGTTAAGTTTTTCCAGTAGGTAACGAACGGTAT
ATGAAATAGGATAGCCTGATGGAAAACGTGATTGTATGAAGCTCATTAAA
CTATTGCACTTTCTGTTTGTCTTCGTGATCATACTTAAAGTCACCTTACT
TATGCTGCGACATAGCGAGATCGAGATATAAAATCATTAATctatatttc
ttattttcattcatGTGCAGTCAAAATTGGTTCATGGCTTGCATTTGGAT
ACGGCCCGTACAGTTGCATTGGGAAGAAATTCGCGTTGAATGAGATTAAA
ACAGTTCTTGTTAAAGTGGTTGCAAATTTCCAACTCTCCTTGAAGAATGA
ACCGAAACTGAACCGAAGAATCAAAGTTGGTTTATTCAATGAAGAACCGA
TTCATGTTCTCATTCAACCAACAAAACGTCAAGAATAACAGACATATCAT
GTTTTATAATCATTTAATCGAATGTATAGTTGGTCAATGTCTTAAAAAAA
TCATGTCATTGGTTTTCACTTCTTTAGCTTGATGAcggaaaattttaata
tttcataTGATAGCTTGGATAGTGCATAATCTAAAAaattaggtattgtc
attttctttaagaagccaattaaaattttaaaagtgcaaaaaatgttttg
gatGAATTTGATTCAAAGGATTAAATTCcaaagaattggaaatttttgtt
tacaggGGTTAACATTTATACGAAGTGTTTCCAGGAACAAAGAAAACGAT
TTAAAGAAAACGATTCATCCTCAACAAAAACCCGTTTTCAGCTTGCAAAA
TTTACCAAGGTGATTGTTCTTGTGGTCAAATTTACATTGGTGAAACTAAA
CGATATACTGTCGCTACGGTGGTGTGAACACGAAAATGTCACTTTAAAAT
CAGAGCCtgaaaaacatttaaattcCTACCCAAATCACAAATTCCAATGG
AAAATTGTCCTCAATGCCCCAAAGAATTGGAGAACTCGTAAAAATCTTGA
AGCATCTTTTATTGCTATCAAGAACCCTGGACTTAATGATCAAAATTACT
GCTTTTAGAAATGGAGTCACGTAGATATTTTatgcattttcttttgtttt
tagaatgttttgaatcaattttaattactcccgaaaaaactttttagatg
TAGATAGAAATTTGTGTAATCTGATAGAACTCTTGTATTTTTATAAGCTT
GAGAATGGTGATACCACCGAAGTATATTGCTTgactgtttttaaattttg
aactttgaaaaatggcttcaaattataACACACGATTCATCATTGTTACA
TTAAATATCGTCCAAAACAttataacctgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044307XLOC_044307Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071295-exon-scaffold_60-1491911889:1174022..1175301TCONS_00071295-exon-scaffold_60-1491911889:1174022..1175301Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1510915933:1174022..1175301TCONS_00071295-exon-scaffold_60-1510915933:1174022..1175301Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1575043694:1174022..1175301TCONS_00071295-exon-scaffold_60-1575043694:1174022..1175301Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1491911889:1176703..1176937TCONS_00071295-exon-scaffold_60-1491911889:1176703..1176937Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1510915933:1176703..1176937TCONS_00071295-exon-scaffold_60-1510915933:1176703..1176937Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1575043694:1176703..1176937TCONS_00071295-exon-scaffold_60-1575043694:1176703..1176937Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1491911889:1177772..1178010TCONS_00071295-exon-scaffold_60-1491911889:1177772..1178010Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1510915933:1177772..1178010TCONS_00071295-exon-scaffold_60-1510915933:1177772..1178010Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1575043694:1177772..1178010TCONS_00071295-exon-scaffold_60-1575043694:1177772..1178010Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1491911889:1178906..1179208TCONS_00071295-exon-scaffold_60-1491911889:1178906..1179208Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1510915933:1178906..1179208TCONS_00071295-exon-scaffold_60-1510915933:1178906..1179208Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1575043694:1178906..1179208TCONS_00071295-exon-scaffold_60-1575043694:1178906..1179208Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1491911889:1179628..1179846TCONS_00071295-exon-scaffold_60-1491911889:1179628..1179846Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1510915933:1179628..1179846TCONS_00071295-exon-scaffold_60-1510915933:1179628..1179846Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1575043694:1179628..1179846TCONS_00071295-exon-scaffold_60-1575043694:1179628..1179846Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1491911889:1180498..1180795TCONS_00071295-exon-scaffold_60-1491911889:1180498..1180795Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1510915933:1180498..1180795TCONS_00071295-exon-scaffold_60-1510915933:1180498..1180795Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1575043694:1180498..1180795TCONS_00071295-exon-scaffold_60-1575043694:1180498..1180795Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1491911889:1181542..1182652TCONS_00071295-exon-scaffold_60-1491911889:1181542..1182652Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1510915933:1181542..1182652TCONS_00071295-exon-scaffold_60-1510915933:1181542..1182652Clytia hemisphaericaexon
TCONS_00071295-exon-scaffold_60-1575043694:1181542..1182652TCONS_00071295-exon-scaffold_60-1575043694:1181542..1182652Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1174022..1182652 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.802317	0.717436	0.837566	1.03206	6.23543	4.37269	4.70056	5.66945	3.87445	4.00457	3.07976	3.82014	2.66659	3.11827	1.94551	2.02448	2.395	2.33541	1.8107	1.39941	4.15763	4.13265	2.08295	2.41132	2.65989	4.72809	4.85723	3.57586	2.48738	2.08719
Blast
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BLAST of TCONS_00071295 vs. Swiss-Prot (Human)
Match: CP3A7 (Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 8.849e-38
Identity = 130/470 (27.66%), Postives = 224/470 (47.66%), Query Frame = 3 
Query: 1377 IPQPWSWPFLKHYPYFVEKDHVKLYADFAEPFRKAGKEFFRVNNLSLPEQVVLLNPEHPKLVLGRP--DLFVRSRALNDVIPFFEHGLLNVRGDQHRRQKKLLSQAFTPAMLSKYLAASNKVGNDKIQKWHDLAKQHTDDTI-HAPAAL-IDVLADYTDIAFTVASKSLVYMPEQDYQEFTKALLGVTDLLKDGTFWKVLFAKIPFVKYLPFGTDGARQKSIKMIDTSIRKVIEKKRQMIINSEEGSDDNDLVGICIRGQLDQSKIDETPLTDLEIRDNLVTFLIGAFDTTSSCLTWTTYAIAKHPDIQKKLREEINQVVEDFDNVTYTDIANLKYLDMVIKESLRYYNASIRVGRLAAQDCHIGDTWIPKGQMIKTVFSLFHMNEKTFPEPEKFDPERF----REPVKIGSWLAFGYGPYSCIGKKFALNEIKTVLVKVVANFQLSLKNEPKLNRRIKVG--LFNEEPI 2756
            IP P   PFL +   F      K Y  F     K  ++ + + +   P  + + +P+  K VL +    +F   R    V  F ++ +     ++ +R + LLS  FT   L + +    + G+  ++     A+     T+ H   A  +DV+   T  +F V+  SL   P+  + E TK LL    L       KV     P ++ L        +K I  +  S++++ E + +     E      D + + I  Q  +       L+DLE+    + F+   ++TTSS L++  Y +A HPD+Q+K+++EI+ V+ +    TY  +  L+YLDMV+ E+LR +  ++R+ R+  +D  I   +IPKG ++     + H + K + EPEKF PERF    ++ +    +  FG GP +CIG +FAL  +K  LV+V+ NF      E ++  +++ G  L  E+PI
Sbjct:   38 IPGPTPLPFLGNALSFR-----KGYWTFDMECYKKYRKVWGIYDCQQP-MLAITDPDMIKTVLVKECYSVFTNRRPFGPV-GFMKNAISIAEDEEWKRIRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKHVFGAYSMDVI---TSTSFGVSIDSL-NNPQDPFVENTKKLLRFNPLDPFVLSIKVFPFLTPILEAL--NITVFPRKVISFLTKSVKQIKEGRLK-----ETQKHRVDFLQLMIDSQNSKDSETHKALSDLELMAQSIIFIFAGYETTSSVLSFIIYELATHPDVQQKVQKEIDTVLPNKAPPTYDTVLQLEYLDMVVNETLRLFPVAMRLERVCKKDVEINGMFIPKGVVVMIPSYVLHHDPKYWREPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALVNMKLALVRVLQNFSFKPCKETQIPLKLRFGGLLLTEKPI 489
The following BLAST results are available for this feature:
BLAST of TCONS_00071295 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CP3A78.849e-3827.66Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1... [more]
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