TCONS_00071245 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071245
Unique NameTCONS_00071245
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length6196

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071245 ID=TCONS_00071245|Name=TCONS_00071245|organism=Clytia hemisphaerica|type=transcript|length=6196bp
atcgaaagtgcaGAGTTCAAAGTTCAAGAAGGGAGGTGTATCATTTTTTT
TGTGGTTTTATTAGTTTGCTGCtgagtttttctgaaaatgactgCAGATT
TAAGGAACAAGGTGGTTCTAATCACAGGTTGCAATGTCGGTATTGGAAAA
GTGACGGCGCTAAAATTTGCTCAACAAGGCGCTAAGATCATCATGGGTTG
TCGGAACATGGAAACAGGAAAACAAGCAcaagaagaaatcaaaaaacaat
CGGAAAACGAAAATGTTGTCTTGAAGAAACTAGATCTTGGGTCTTTGCAA
TCAGTTCGTGAATTCAGTGAAGAAGTTTTAAaagaagaggaaaaaattga
tcTTCTTATCAATAATGCTGGCATCATGGGAACAAAATTCGGGCTCACTG
TTGACGGTTATGAACAACAATTTGCTGTCAACCATCTTGGTCATTTCCTA
TTGACCAACTTACTGTTAGAATTACTCAAAAAAGCTGAGTCAGCACGTGT
TATTGTTCTCGCATCTACATACGGCAAATTGGGATTACCAAATTTTGATG
ATGTGAATTATGAAAAGACTTCATATAGGCCCTATAAATCGTACGACCGT
AGTAAATTAGCCAATGTTTTATTTGCAAATGAGCTTGCAAGACGTCTGGA
AGGAACCAACGTGACAACGTACTCCGTACATCCTGGTGTTGTCAAGACTG
AACTTTATCGTGATCAaaaatcaatcactaaattctTTATGGCTCCTTTT
AGAGTTTTTATGAAAACTCCTGAACAAGGAGCAGCAACGACATTGTATTG
TGCTCTTGAAGAAGGTATCGAACAACATTCTGGGTTATATTTCGCTGACT
CTAAACTTGCATCTTTTCCGGGCAAAGGATTTGACGAAGAATCAGCGAAA
AATCTTTGGGAATTGAGTGAGGAACTAGTGAAGTTAAAAGAACCTGCTCT
AGATGAAACTGTGGACGCTCAAGATGCTGACGTTGCACTGCACACTGGAG
AATGATGAAGAATTATACAGTTCAATGTGATGTAACTTGGACTATGAACT
CGAGTTAATTTTGGGTACAAGAGAGATTAAAATAGATGAATAAATCGATT
AAATTTATACAATCAATCATATTATATAAATCAGATTGAACTTTTGTTTT
TTCGGAGAACTTTCCAATAAGTCACTGTAACTTAGACATTCTTTTCTACA
CCCCTGTGTCCCAGTTAGTTTCCCTATCCGTTGGTCAAATTTCACCATAT
TGTTTGGTAAACTCTACTGAACTCATCCTCTTTACAATTTTTAGAGTCCT
ACAGTACCTCTAACTTCTATTTTAAAGGATAAAGGAAATCTCTACCCATT
TAAAACAAGAGACACAATTTATTTATCAATTTCTTTTATGTACTTACTAG
AATTAATAtatgtaaatttttataaatttcatgggattttataattttaa
atttgcaATGAATTGAGTTTTTTCAAGATCCTTTGGTTTCTTTCAATTTT
AAGAATGTCGAGCCTTGAACTATTTCAGATTAGTGTGGAAAGATATTGAG
ACTTCGTATGACTGATGCGACTCTTCTTAGACAGCCGGATGTATCCCTTT
TTCACTGGAAAAAAATcggtaaaaaaattcatcacGACAAGAATGCCTTG
AAATTCGGACCCATTGATTGGAAAACTGTAagaatttatcaattttattt
tttgtatgtACTAGGCTTATTGAATTAGATACAATCGCATGTAAATTTTA
TGAGTTTTATTTTGTATTATAACTTTAAATTGCAATGATTGAATTGTTTT
CGAGGTCCTTAAATTCCTTTTAACTTTAAGAATGAGACATCACGTGACTG
ATGTAACTCTTCTTAGACAGCTTTGTAATAAACAtgttttcagttttcat
tttttcaaaaattcttgaGCATAATTGAGCataattttgaaagaattttt
ttagcTATGCTAGAAATGTAGTTTTGGATTACAAATTTATTGGAATCTAT
TTTATAGGTTCTAGAAACGAAGGGAAAAATTATGAGGATATGGTTGGTGG
GTTTTGTTCTTTCGTCGTTTGTTTTCTATCTGGAATGTCAACCAATATCC
GCAGAGCTACAGAATGGAGACACGATAAACAATAACAATGTGGAGGAGAA
TAACGAAAGGACGTTCGAGCATCAAGACGAATTAGGATCTGGTGGAGTTG
ACAGTTCTGGCGATCCTTTTGTTGATGGAGAATCGTTAGTGATTGTCGAT
GAAAAGAAGGCGTTATCAGCTGGTGGCGATGGAAATGTTGCTGGTggaga
agatgaagaagaaaaagaagttgATTTCAATACTGGTCAAAAGGAACCTA
CTGATGACAATACCAAAACATACCAACCTGAACAAGAAGAACTACAGCCA
CAACAACCAACCAGCCCACAGCAACCACCAATTGAGTCTATTCATCAGCA
ACCACTTAAACCGCAAGTTTTTGAATCACAACAAAACAATGAGAAGGAAT
TCCAAATGAAATTAAGTAAAATTAAGAAGATTCCTTCCAgtaaattcgtc
ggttctaaaatttctcataatcaaaattttgtgttaaataaaatacaaaa
tccAGCCTCGTTATCAATCAAGTTCATAATAAAGCCATTGGAGAGCTCTT
CTGAAACACCATCCAGAATAGAATCTCTCGTGGACCAACCAACGTTGACT
GAAGCAGACGATGGCTCGGGAAAAAGGGATGACATATCAACTGTTATAGT
TAAAGAAGAGGAGGTGTCAGGAAGCGGAAGTGGTAGCGAGGGGACAATGG
CTTCAGGCAGTGGCGAACAAGAACTTGTACAAACAGATGATACGGCTGAC
TCACAGAAAGTGTTGACTTTCACTCTGAAAGCTGTATCGCATCCGTTgag
attgaaaaatgaaactttgccTTCCAAGGCTAAAGATTTGATTGCTCCAA
CGAATTCAAATAAACCGCAAGCCTTTCTAAAACTATACCACAATGAGTTT
TCCAAGAAGGAATTCGTTCCTGCAAGAGAAATGAATCTACCAGGAAAGCA
AGAGACCATCCAATCGCCAAAACAACTACAAAATCTCTTCTACACAAGTT
TGAATGCTGATTTTCATGCTAAACCTGAATTTGGTTCAAATTACGACCCC
TGGTCAAATGCTGATATCCAGAGTCTTCAGGAAATGGCGAGCACAGCTTT
AGAAGAGAATAAGGAGACAACGAAACAGGACTTGGCAAGCCGTAGTAAAT
TTGGCCAACCATCTGCGATAACCAATAATGACCAGATGAACGCATTGATG
TATCGCGATCAGCAGTCTTACTTGGGGAAGGTTGGAAAAGCGACAGAGTT
AGAAGAACAAGCTGAAATCACCAATTTTAAAACACAAACTGCAGAGCCTC
CTGTCGGTGATGTGGTTGGTAAGTTTGGAAAGCCAACAATGGGAGAAATG
GAATCTGAACTGTCAAGCATGCCACCATCTTCCATGTTTGGAAATGCTGG
TGAAACGTTACCGAAGAATCAGAAGATATTCCACAAAGATAATGGAAAAG
GATCACAAGATTTCGAGTCAATGGTAGAAGGGTTTGCAAGTGAAGAATTA
CACCAACTGGAACATCAGAAGGTAGCTTCAAAGAATAACGTATTTATTGG
TGACTTGCCAGCAATGAACGAACAACAAACTAAACTGTCACAAAGTGATT
CTGCATCATTAATGGAGGTTCCTGAACATTTACCGNATGAACGAACAACA
AAATAAACTGTCACAAAGTGACTCTGCATCATTGATGGATGTTCCTGAGC
ATTTACCAACAGATCAGGAGACTGTTGGCGCCCGATTAAAGGCGGAAAAC
GAAGACGTTAAACAAATGGCTAATGCTGAGATAAAGTATAAAGAAATGGA
GGCTAAGGCTATTCAAAACGAAATGGCCAACCGTAAACAATATGTTGGAA
GTCCTGCTCCTGAACCATCAACCAATGTCAATGCAAATCTAAGGTCACCA
ATATCTAGACATGGTTCCAAGAAGCTATTGAAAGCTGTTGCAAAGAAAGG
AAAGGTTCGATCAACCTCcaagaaacataaacattagaCAATTATTTTGA
CGGTTTACCGCTAAGAATTCAAAAATTCACTCATCATTGATGCCCTTGAT
CTCTTGAATTTGTAGTTTATTCGATACCGAAGAAAGCTTAACGTTTCCGA
TAAATTATCCCTATTTTGTAATATTCAAAATTCCAAAGATatttttcatc
cccattgaagTTAGAGACTTCCATTTAGTCCACACTTAGCGGAAAGACTT
TTCTCAGGtcaatgagacagggatgtaatgaATTGTATTTTGATATACTG
ATCTGTTGATTGCCATAGGTAGTAGAGTAGGAGAAAAGTCCTGATTCTCC
gcttttttaaacatttgatCAACAGACGAGCCACACCAAATTAGTATATG
TCATCACcacaagaaaaaaatcatgacGACTTTTTTTATCGAGTCTCGTC
GTAATCGAATCGTTTTTGATAGAAGGACAAGGAAAAACAATCGAAATTGT
ATAAAAATTTGATGATGAAGAAAGAAATAGTCACACATGATTAatcaaaa
ttacaatttttcttCAGATACGATGATATTGTTTATATGAGTAGGAGGAG
TAATGAGACTTCCTGTACATTTTCTCCCATCTTAATTATCACCATCAACG
CGTGAATCGAACGaatgaatcaaaaaaaatattacaaaattttTGATCCG
TGACTCAGAAGAATTTATTCGTTATTTTGCTGTTATCAAAAAATTACCAA
CGTGaaaaaaagagctttaaaaagTTTTCNTCACCATCAACGCGTGAATC
GAGCGaatgaatcaaaaaaaatattgcaaaattttTGATCCGTGACTCAA
AAGAATTTATTCGTTATTTTGCTGTTGTCAAAAAATTACCAACGTGAAAG
AAAGagctttaaaaagttttcttcgaGATTCAGTTACAAATGTCAGAAGG
TTACAATTCCTAGAAAAATCCGGGAAAATAAAGCGAAGAACTTTGTTCCA
TGGGGGGTGTACTAGGGTTGgaggatgaggggtatgtgcggatagAACCT
CCAAAAACCGAGAATTTTCCAACCCTTCGAGAgactaattcaaatttttc
tgatttttgcgacctttagagagactttaaaaggtgaaaaaagcgaccct
taccgtctgcaCATTTCCAGCACCCACTTTTGCCTAAGAACCCCCCCCGG
TACATTGTCTATTCTCGAACTTCAGCCTCAGACGTAAACCGTGAAGTAGA
ACTGGTCCGTGGAAGATGAAAGTAACTATTTTAACCGAAAGTGATTCTTC
AAGTTTTATCTGGATTAAAACACTAAGAAGAGATTCATACATGAGACACA
TAAAAACAAGACATAAAATGATAATTCAATTGTAAAATCAGGGCGTATAG
TAATGAGTTTGCTTAAAGGATTTCTCATCTTAATTACCTGAGAGGAAATG
TTAAGGAAGTCATTGACCAGCCCTCGTTTCTaacaaatatataaataaac
aaaatcGATAAAATGATTTATTTGGTTATAATTAAATTTTAGGTAATATG
ACGTATTTGGAGTTTATTGTTCATTGTTTATAGGAATTGTAAAATTACGT
AATACAATCCTCTAATTAATGAAATCAATGTCTATTGCGCGGTAATTATT
CAATCAGTCAATTACAGTATTATCATTTGCTGGTTACCAGGAGGCCTAGG
AACGAAGTTATCTAATAAACATTGGCTGGTTGATAGGATTTTTAGTGATT
CGAACCTTTAACAGCTTATTTCGACAACTATCTCGAAAATCAGATCACCA
GTCAGATGAAGTTTGTCATCGTTCAGTCGGCCATGAATGCCATGAATTAC
TGTGTCGTGGTGAAACGTAATAGGAACGGTTTTAGGATggtaaaacgaac
aaaaaaatgcccgcgcggcaattggcgacTACGATCGAAAAAGTGTATGC
CAGTAGAATACCAAAGGATCCATACCAAGTCATTAACCAATATCACTCAG
TATCTTCCTTTTATTCACAACTCACCCCTGGGTATAGAATTTCCTCCGGA
TATTTCTTGTTTTCCTCAGGTTCTGTCATTttctgtaaataaaaaaaatt
tggggtttCCTTAGAAAATTAGCGATTCGTTCATCAAAGGTTTATA
Run BLAST on NCBI

protein sequence of TCONS_00071245-protein

>TCONS_00071245-protein ID=TCONS_00071245-protein|Name=TCONS_00071245-protein|organism=Clytia hemisphaerica|type=polypeptide|length=574bp
MRIWLVGFVLSSFVFYLECQPISAELQNGDTINNNNVEENNERTFEHQDE
LGSGGVDSSGDPFVDGESLVIVDEKKALSAGGDGNVAGGEDEEEKEVDFN
TGQKEPTDDNTKTYQPEQEELQPQQPTSPQQPPIESIHQQPLKPQVFESQ
QNNEKEFQMKLSKIKKIPSSKFVGSKISHNQNFVLNKIQNPASLSIKFII
KPLESSSETPSRIESLVDQPTLTEADDGSGKRDDISTVIVKEEEVSGSGS
GSEGTMASGSGEQELVQTDDTADSQKVLTFTLKAVSHPLRLKNETLPSKA
KDLIAPTNSNKPQAFLKLYHNEFSKKEFVPAREMNLPGKQETIQSPKQLQ
NLFYTSLNADFHAKPEFGSNYDPWSNADIQSLQEMASTALEENKETTKQD
LASRSKFGQPSAITNNDQMNALMYRDQQSYLGKVGKATELEEQAEITNFK
TQTAEPPVGDVVGKFGKPTMGEMESELSSMPPSSMFGNAGETLPKNQKIF
HKDNGKGSQDFESMVEGFASEELHQLEHQKVASKNNVFIGDLPAMNEQQT
KLSQSDSASLMEVPEHLPXERTTK
Run BLAST on NCBI

transcript from alignment at scaffold_60:431829..445926+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071245 ID=TCONS_00071245|Name=TCONS_00071245|organism=Clytia hemisphaerica|type=transcript|length=14098bp|location=Sequence derived from alignment at scaffold_60:431829..445926+ (Clytia hemisphaerica)
atcgaaagtgcaGAGTTCAAAGTTCAAGAAGGGAGGTGTATCATTTTTTT TGTGGTTTTATTAGTTTGCTGCtgagtttttctgaaaatgactgCAGATT TAAGGAACAAGGTGGTTCTAATCACAGGTACGTtctttaaatgtattttt tgctaaggtagaattttatttcaacaatcaaatcaGAATCTTCAAGGAGG AAATAGCCTAGGCGTcccgggaaaattttaacaggTTTGCTCCCTGGAAA TACATAGCTGTTCcctggaaaaaatttgaaagttctgTAGCAAATtctcc agctggaaattcaCATGTGTTCTCCAGGCTAATTTTACGGAATTGGTAGA ATTTTGGAGCTGTTCCTTTTTTAACCACAACGCACGCACTAGCTGGAAAC CTGGAGCCATTCCTGGGGGACGATTTCTTTGAAGGCGTTCCcatgaaata gaccttttttcaaagaggccaccctgttgaataattatgtagtccatcag aaaaacaatgattatctatctatctatctatctatttaatTAAGTAGCAT TAGGCGTGAGCCCATATTCGCCAcatataaaatttaaagtttaaaataaa tattattgttATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNtaagtaaaaatttttattgatatacaaaataaaataaaat aaaataaaactcctTCCTAGTATTGAGTAAACCTCAGAAATAATGCAAGA GATTAGTAGATGCTGAGCAGGAATGAATGAATTAATGGCACAAAGATTGT TCTAGGGTAAGGTGCGAAAGACTTGAAAGTGGAAGTAAAGAAAATCTATA TTGCTCTGACATTTTTCGCATTTTtctttccagctggaaatagacctttt ttcaaagaggacgtcctgttgaataattatgtagtccagccataaaaaca atgatagagccataataattatgaaaaaaaaataaatatgcatggtttta tcattgtttttctgctggactacataattattcaacagggtggcctcttt gaaaaaaggtctatagagagccgttcccataaaatatctatattgctttg acatttttcctttttcatctccagctggaaatagagagccGTTCCTATAA ATTTATAAATCTGCTCCTGGCAAATGTGAACGGCTATTTTAAGAAAAGGg cgaaacttttttttgagagCTGTGCAATTTGTTCCATTTTCCTCCAGgca catttttcttttccagctgGAGATTTGAAGCCGTTCCGGACAACCTGATT ATGTTCATTTTCTCCTGGCTGGCAAAAGGGAACagctttttcgtgttttt gcctcggtggctgcttctgtaaTAATCCTGCCTTCCAGCAGCTTCCAGGC GAACGTGAGCGCCAGAGTACGACTGCTGATGTACTGGACTTACGTACGGG ACTAATCGTTGCATCAGCAGGGTCATGGCAGAGTCTAGCATAGATAgcta actaattactccacacttCAGTCCATTCAGTGCCAGTAGATGCAAGTAAA ACCAGAAGAAATTTACATTTTACCCAGCATAGTTTTGTTCCAATTGGCAC GCTAACATTCTCGTTAATTAAACGCCCCCAGCCAGTTAGTCGAAATACGT ATcaaaagattaatgctgcgaaaacgctatattgtttacctgactctcaa gcaaaaaaatacgccgcaaaacttttgaagggattcatgaaaaaataacc cggcgctttttaatgaaattaacattgccaaaaactatgagaaattgcct aaaatttgagccaagccaaccttgagaactaatttgaaggtcaacttccc aagaaaaaggtctacgggggagacggaacccacctacaTCCGCGCACTTC TGGATCTTGGATAGGCTgtttcccagaaattttgccgTACCTCAAATACT GACCCATGCCATTCACATGTGCGgaattttgtttttactttagcgttaCT TTATCTTTctccttcttcatcttcaatgaagcagTCAAAGTTTTACTAAA GTTAAGGACATAAGattttcttataattattgattttACTGGAATACTGT TCTGTTTGTTGCACGCTTCTGTGGAGTGCACGACGTTGGTCTTCAGCTTT GAGAAGTGGTAATGTTTTCAGTTGCTTGTGACCAAAAATTCTAAGAAACT AGAATTTAcgagtgtcatttagtttttgctggctgatagaatTGCAGGAT TGTGGATGATTTCCTTAACTGAAGGAtgtaaaaaagggtcaaaaccaGTT GGAGTGCTAAAAGAGGCTCCTCAAGGTTTtcgtgatgacgtgataggAAC TTTTTTGTAGCGAGATtacgggaaattttttttcgtgattgcgtgatgtc aaaattcaaaacgtgatcgtgatttgaaaaatctttgtgCCGTGATACAT GATTtggacttttcaaaacaaagggatGTCTGATTAGCCattttttactg attttcaTGATCATTattagaaacaaaaatttgcgtgatatcgtgatcag agttacggCTGGGGGGCCTCCTAAAAGAATACAATAATAATCGTTATGTC TAAGTTTCCTTTTATATTATACTTCTCTACAGCTATTTATTTCAAATAAA GAATTCTCCTAGAATTTATTTgacgtttatttgaggggggggggcagcgt tctttaaaaaatgtttcctcATTTAAGCATGGGTGTGAGGGGGAGTTTAA AAAAGGGGATGTTTAAAAGAAGGgatgtttaaaagaaggggacgtttaaa agaaggggcgtttatttgaaataatatgGTATGCGTATTGAGATAATGGT ATTTAATATTGGCCAATATGCATAAATTATCCAAAATAGTGCAACACAAT CATTTAGTTAGTGTTTTGATTCGTGtttgtttaatttaaaaattGGCTTA TGATTAAAAGTTATGCATGCGTGTTTAAGGCTGACTTACAGCTTTTACGC AAATTTTGCTAGTAGCAAGTTAAGTATCTTTGAGGCTAGATAAGACTTGG AGGGGGCTGACACACCTGTTTTATGCTttttaagaataaaaaatcaCCAA GGAATCATACAAATATAGTAAAATTAGTTAACACAGGACTAGAAACCTTC ATAATTCAAAAGCTTGTTTTCTGTTTCCATTCTGTTATCATCATTTCCAA GTCATTGTTATAATTGGTATCTTATTATCATAATCTGTCAACCTAGAGGT ACTTTTAGGGCATAGTGTATTTTAATAAAGAAACATTTACTTTTTCGTTG TCtacaatttctcaatttttcttccACTACTTTGCTTTATCGAATCGGAA ATTTTTGGTGTAGCCATGATGTTCGAAGTGTACTTGATAGtaattggatt tttttattaaatcNCTTCCACTACTTTGCTTTATCGAATCGGAAATTTTT GGTGTAGCCATGATGTTCGAAGTGTACTTGATAGTAATTGGATTATATGG TAATTGGTAATGAACAATCTTGTGCGTTTTAATGCATACTTTCTGAAAAC GATTCTATACTTTTAAGCTTTTTACATCCAGGTCCAAGCGTCAAAGCCTA TTCACCTGTCCTCTGTCGATAGGTCATATTTCGGGACTGTCGCTTGAGGG AGTCGACCTAGAATCTGAGGACCTAAACTTTCagccaaaagctagaaaat ttcaaaaagaaatgacCTGAAGGGGGTATAAGACTTGAGGAACTTGGTAG AATGATTAAGCAAATTAAGTTTCCAAATCATCATCCAATCaatcttttga tttgatttctttCTGCTCATAAATTTTCGtcaacaaaatttaattttaat atcTGTTTTCTCATACTTTTATGTTCCATGTGAGGAAACTTTTTAAAGAC TTTGTGTATCTTCGGTATTAAAAATTCGAACCGGAGGCTTAATTCGAGAG AATATTGAAAACTTGTTTTGAAGATGCTATCCGTGAGAAATTGATTGATA GAATCTCCTTCGAGACGACTCTTACATTGCTAAAACCAGGAGtaaatttc tcagaaaaattaaaatcaggCTGGTCaaatagtcccgctgctgagctcga taaaagtggctagaaaacaatttctcaaaaaggtgtttaattttgcataa attattgcagattgtggggaaattccctgtttttcatcagtttttgacca caaataggcccataacttttgatctagagaagttgggactttggtgtaat acacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAATTtgtgag tttccaccaaaaaaagttagttctaagatgtgtgtcacgaaaattgtttt ctagccacttttttcgatctcagcagcgggactaaaaAGTTGCTTCTGAC ATTAGGCCCAATAGCTTCATTCATAGTAGACGATGTTACGACTGTTAAAC GCAATGAAATATGTTTGTACAAAGCCGATAGTGTTATTAGCTAGTAAAAC GTTTGTGATAGGCTTTCGAAGGTCGTCAAAAGCATTAATCATGAGGAATT TACATtatgtaaaaactttttttgggacacactgtatatatCAAGTGTAT GAAATTCATTCATGAATCGCCATCtcatgaaaaatttattcttgcTGAAG TAACGAGAAATGGCTGGTTTGTTGGTTTGTTGGGAGGGGTAGATTTATAA AGAGAAGTGAAGAGTTCTCTATACACTTTTCTTCATAGTGATtcataaat tttatttctttatttgatTTGTAGGTTGCAATGTCGGTATTGGAAAAGTG ACGGCGCTAAAATTTGCTCAACAAGGCGCTAAGATCATCATGGGTTGTCG GAACATGGAAACAGGAAAACAAGCAcaagaagaaatcaaaaaacaatCGG AAAACGAAAATGTTGTCTTGAAGAAACTAGATCTTGGGTCTTTGCAATCA GTTCGTGAATTCAGTGAAGAAGTTTTAAaagaagaggaaaaaattgatcT TCTTATCAATAATGCTGGCATCATGGGAACAAAATTCGGGCTCACTGTTG ACGGTTATGAACAACAATTTGCTGTCAACCATCTTGGTCATTTCCTATTG ACCAACTTACTGTTAGAATTACTCAAAAAAGCTGAGTCAGCACGTGTTAT TGTTCTCGCATCTACATACGGCAAATTGGGATTACCAAATTTTGATGATG TGAATTATGAAAAGACTTCATATAGGCCCTATAAATCGTACGACCGTAGT AAATTAGCCAATGTTTTATTTGCAAATGAGCTTGCAAGACGTCTGGAAGG AACCAACGTGACAACGTACTCCGTACATCCTGGTGTTGTCAAGACTGAAC TTTATCGTGATCAaaaatcaatcactaaattctTTATGGCTCCTTTTAGA GTTTTTATGAAAACTCCTGAACAAGGAGCAGCAACGACATTGTATTGTGC TCTTGAAGAAGGTATCGAACAACATTCTGGGTTATATTTCGCTGACTCTA AACTTGCATCTTTTCCGGGCAAAGGATTTGACGAAGAATCAGCGAAAAAT CTTTGGGAATTGAGTGAGGAACTAGTGAAGTTAAAAGAACCTGCTCTAGA TGAAACTGTGGACGCTCAAGATGCTGACGTTGCACTGCACACTGGAGAAT GATGAAGAATTATACAGTTCAATGTGATGTAACTTGGACTATGAACTCGA GTTAATTTTGGGTACAAGAGAGATTAAAATAGATGAATAAATCGATTAAA TTTATACAATCAATCATATTATATAAATCAGATTGAACTTTTGTTTTTTC GGAGAACTTTCCAATAAGTCACTGTAACTTAGACATTCTTTTCTACACCC CTGTGTCCCAGTTAGTTTCCCTATCCGTTGGTCAAATTTCACCATATTGT TTGGTAAACTCTACTGAACTCATCCTCTTTACAATTTTTAGAGTCCTACA GTACCTCTAACTTCTATTTTAAAGGATAAAGGAAATCTCTACCCATTTAA AACAAGAGACACAATTTATTTATCAATTTCTTTTATGTACTTACTAGAAT TAATAtatgtaaatttttataaatttcatgggattttataattttaaatt tgcaATGAATTGAGTTTTTTCAAGATCCTTTGGTTTCTTTCAATTTTAAG AATGTCGAGCCTTGAACTATTTCAGATTAGTGTGGAAAGATATTGAGACT TCGTATGACTGATGCGACTCTTCTTAGACAGCCGGATGTATCCCTTTTTC ACTGGAAAAAAATcggtaaaaaaattcatcacGACAAGAATGCCTTGAAA TTCGGACCCATTGATTGGAAAACTGTAagaatttatcaattttatttttt gtatgtACTAGGCTTATTGAATTAGATACAATCGCATGTAAATTTTATGA GTTTTATTTTGTATTATAACTTTAAATTGCAATGATTGAATTGTTTTCGA GGTCCTTAAATTCCTTTTAACTTTAAGAATGAGACATCACGTGACTGATG TAACTCTTCTTAGACAGCTTTGTAATAAACAtgttttcagttttcatttt ttcaaaaattcttgaGCATAATTGAGCataattttgaaagaattttttta gcTATGCTAGAAATGTAGTTTTGGATTACAAATTTATTGGAATCTATTTT ATAGGTTCTAGAAACGAAGGGAAAAATTATGAGgtgaaaataattaattt tcaataattatagtttctttttttttgtttcaaatttctttttgtatgaT ACAGTATTCAAGACTTGATCTCTTACTAAAAATTGGTTGAAAGGGTTGTA CGAAAAGGCTCTACGAAATTTCAATAGGCTTTTATAAGAATTGGTAAATT TTGATTTAGGGTTGACTGTTTAATTCGTTTTTTCATGATTCCTAGGATTG GTGCTTGATATTGTTCTAGATTTGCTGACTCAACCCCATTATTGACTTAA AGAGGCTTAAAATCAGTATTTGGTTGctcttgttttattttaagcTTTCG AACAAGATTGAggctaatgttcttataaatttcttTATCATACTAACTAT TAAGCTCGTAATAAATATATATCATATGATGCTTTCAAACAGGATATGGT TGGTGGGTTTTGTTCTTTCGTCGTTTGTTTTCTATCTGGAATGTCAACCA ATATCCGCAGAGCTACAGAATGGTAAGTGAAACAGCCAATTATGAGAGGG ATTTTGaatcttttgaaagaatatGAAATTGAATAATACAAAATAAGTAG GAGGAAAATAAAAGGAGTCCCCCACCCAAGCGGCATCCCTCATTATGCCA ATTTTTTGGTCTTATCAAGAAAATTTTGCTTTCGCAAGAATTAACTTTCG CTTTTCAAATTACTTTGCGAGAAAAGAACTTTTACATTGATTTTCGTTGA AGTGTCCAAAAAGTACTCCAGTTAGGTTGTATAAGAGGCGATTTCACAAA AAGGGTagatttaaagaattttttcgcGGCAATTAACTTTTGCGAATTTG CCCGAATTGCCCGAAAAATTTCTTCCCCTAATTAAATAATAAGCGGAGAA AGAACAAAGGTCGTTCCTGTTTGAATTTAGTGATCTTCCATCCCCCCTGA CCCTGTTAGATATTTCAACCTGAAAAGAGGGATCTTGAGCATTTTTCCGG AGTATATCCCCTCCCCTTGGAGAGgtgcagtagtgtagtggtcatcgttC TTGACTTCCACGCTGGAGgtcactctgatacaagagtatggggaaATATG CTGGACATTGAATGTGGTGTAGTCATGGTACTCATATGTTCAGTACCTGC GAAAACGCAAGGTTCTCCCGTACTGTTCAagtatcatcatcgatacagca TGGCTCTGATGTGTCGCGGGCACAGAGTAGAATGTCTGATACGCGCTGTG ATTTCGCTATCTAGGAGTAGgaaactatcccgggatagggcccggtccga tgatatcggagggtcAGCTTCTCTTCTCTCAGCTTCTCCCTCTTCTCTAT CCCCCCTTTATGAAAGGCTAAAAACTTAACCATGTCTGACTGTAAAGAAA TAAATAGATcatacaaataaaaatattatctaTCGACAGGAGACACGATA AACAATAACAATGTGGAGGAGAATAACGAAAGGACGTTCGAGCATCAAGA CGAATTAGGATCTGGTGGAGTTGACAGTTCTGGCGATCCTTTTGTTGATG GAGAATCGTTAGTGATTGTCGATGAAAAGAAGGCGTTATCAGCTGGTGGC GATGGAAATGTTGCTGGTggagaagatgaagaagaaaaagaagttgATTT CAATACTGGTCAAAAGGTATTATATCGTCGCTTCATTCTTATCGGCATTC CTTTTTGTATAAGAGCAAGATTTAGTTTCAGAAATCATGTTCCAAGTAAC CCAACACGCTTTTCTCAGTGTCCAAGTGGAATTTGAAATATCTCCCCTCC CCGGTGACTATGATCTAGATGAGATTACAACAGGGGAGAGAGGGTTAGGC TGATTCTCAAACTAGGGTTTAAATATCACACTTTTTTTAGGCCGTTTACC TGGATATACTTGTGctgatttagaatttttttccatcGAAGCTTAGAGAC TTACCAATCTTTCATTTAAAGCTGTCATTTAACTTTTCCATCATTTTACT ACCAAATAGGAACCTACTGATGACAATACCAAAACATACCAACCTGAACA AGAAGAACTACAGCCACAACAACCAACCAGCCCACAGCAACCACCAATTG AGTCTATTCATCAGCAACCACTTAAACCGCAAGTTTTTGAATCACAACAA AACAATGAGAAGGAATTCCAAATGAAATTAAGTAAAATTAAGAAGATTCC TTCCAgtaaattcgtcggttctaaaatttctcataatcaaaattttgtgt taaataaaatacaaaatccAGCCTCGTTATCAATCAAGTTCATAATAAAG CCATTGGAGAGCTCTTCTGAAACACCATCCAGAATAGAATCTCTCGTGGA CCAACCAACGTTGACTGAAGCAGACGATGGCTCGGGAAAAAGGGATGACA TATCAACTGTTATAGTTAAAGAAGAGGAGGTGTCAGGAAGCGGAAGTGGT AGCGAGGGGACAATGGCTTCAGGCAGTGGCGAACAAGAACTTGTACAAAC AGATGATACGGCTGACTCACAGAAAGTGTTGACTTTCACTCTGAAAGCTG TATCGCATCCGTTgagattgaaaaatgaaactttgccTTCCAAGGCTAAA GATTTGGTAAGAAACTCTTCTTCTGATACatgatgaaattttcagcattt tatTCTTGAAACTCTTGATATCTTATCATTCAATAGTCTCTTTTtcacac ccctttctcacagatcCAGGTGGGAACCCTTCCAGCtggaaaaaattggc caaaatatcgtccccagtggaaaacaATACTCAAATTTTAGTCCTTACTG ACAATCaccaaataaaaaaatgctcactttaaaATATTATAACCAAATGA ATCTTCTGACTCGATAACAATAGATTTCAAATCCCCAGTCTTGAGAATAT CACTTCCATTGAGTTTTAGCCCATTATTGGCTAAAAACATCCTACCGGGT CAGTGAGACGAGAATGTTTTCTTTCGAAGTGTTAACAAAAGAAGATCAAC TACAGCTAATGCTAACGCATCTGATCGCTTAGTAAAATCCTACCAAACTT TTTTCCATTAGATTGCTCCAACGAATTCAAATAAACCGCAAGCCTTTCTA AAACTATACCACAATGAGTTTTCCAAGAAGGAATTCGTTCCTGCAAGAGA AATGAATCTACCAGGAAAGCAAGAGACCATCCAATCGCCAAAACAACTAC AAAATCTCTTCTACACAAGTTTGAATGCTGATTTTCATGCTAAACCTGAA TTTGGTTCAAATTACGACCCCTGGTCAAATGCTGATATCCAGAGTCTTCA GGAAATGGCGAGCACAGCTTTAGAAGAGAATAAGGAGACAACGAAACAGG ACTTGGCAAGCCGTAGTAAATTTGGCCAACCATCTGCGATAACCAATAAT GACCAGATGAACGCATTGATGTATCGCGATCAGCAGTCTTACTTGGGGAA GGTTGGAAAAGCGACAGAGTTAGAAGAACAAGCTGAAATCACCAATTTTA AGTaagttcattttcttcttctgttGCTGTCTTATTGAATCCACGACCTT GCCAAAGTTACACAGTAGATTCTCTCTAGCCCAAACCTCTCTAAGTCCAA CGTCTCTTTAACATGTACAAATCTGATGATCCATGAAGATTTCCTGATAA ACTTTTATAAAACTTATTTGATCAATGTTTAGAACACAAACTGCAGAGCC TCCTGTCGGTGATGTGGTTGGTAAGTTTGGAAAGCCAACAATGGGAGAAA TGGAATCTGAACTGTCAAGCATGCCACCATCTTCCATGTTTGGAAATGCT GGTGAAACGTTACCGAAGAATCAGAAGATATTCCACAAAGATAATGGAAA AGGATCACAAGATTTCGAGTCAATGGTAGAAGGGTTTGCAAGTGAAGAAT TACACCAACTGGAACATCAGAAGGTAGCTTCAAAGAATAACGTATTTATT GGTGACTTGCCAGCAATGAACGAACAACAAACTAAACTGTCACAAAGTGA TTCTGCATCATTAATGGAGGTTCCTGAACATTTACCGNATGAACGAACAA CAAAATAAACTGTCACAAAGTGACTCTGCATCATTGATGGATGTTCCTGA GCATTTACCAACAGATCAGGAGACTGTTGGCGCCCGATTAAAGGCGGAAA ACGAAGACGTTAAACAAATGGCTAATGCTGAGATAAAGTATAAAGAAATG GAGGCTAAGGCTATTCAAAACGAAATGGCCAACCGTAAACAATATGTTGG AAGTCCTGCTCCTGAACCATCAACCAATGTCAATGCAAATCTAAGGTCAC CAATATCTAGACATGGTTCCAAGAAGCTATTGAAAGCTGTTGCAAAGAAA GGAAAGGTTCGATCAACCTCcaagaaacataaacattagaCAATTATTTT GACGGTTTACCGCTAAGAATTCAAAAATTCACTCATCATTGATGCCCTTG ATCTCTTGAATTTGTAGTTTATTCGATACCGAAGAAAGCTTAACGTTTCC GATAAATTATCCCTATTTTGTAATATTCAAAATTCCAAAGATatttttca tccccattgaagTTAGAGACTTCCATTTAGTCCACACTTAGCGGAAAGAC TTTTCTCAGGtcaatgagacagggatgtaatgaATTGTATTTTGATATAC TGATCTGTTGATTGCCATAGGTAGTAGAGTAGGAGAAAAGTCCTGATTCT CCgcttttttaaacatttgatCAACAGACGAGCCACACCAAATTAGTATA TGTCATCACcacaagaaaaaaatcatgacGACTTTTTTTATCGAGTCTCG TCGTAATCGAATCGTTTTTGATAGAAGGACAAGGAAAAACAATCGAAATT GTATAAAAATTTGATGATGAAGAAAGAAATAGTCACACATGATTAatcaa aattacaatttttcttCAGATACGATGATATTGTTTATATGAGTAGGAGG AGTAATGAGACTTCCTGTACATTTTCTCCCATCTTAATTATCACCATCAA CGCGTGAATCGAACGaatgaatcaaaaaaaatattacaaaattttTGATC CGTGACTCAGAAGAATTTATTCGTTATTTTGCTGTTATCAAAAAATTACC AACGTGaaaaaaagagctttaaaaagTTTTCNTCACCATCAACGCGTGAA TCGAGCGaatgaatcaaaaaaaatattgcaaaattttTGATCCGTGACTC AAAAGAATTTATTCGTTATTTTGCTGTTGTCAAAAAATTACCAACGTGAA AGAAAGagctttaaaaagttttcttcgaGATTCAGTTACAAATGTCAGAA GGTTACAATTCCTAGAAAAATCCGGGAAAATAAAGCGAAGAACTTTGTTC CATGGGGGGTGTACTAGGGTTGgaggatgaggggtatgtgcggatagAAC CTCCAAAAACCGAGAATTTTCCAACCCTTCGAGAgactaattcaaatttt tctgatttttgcgacctttagagagactttaaaaggtgaaaaaagcgacc cttaccgtctgcaCATTTCCAGCACCCACTTTTGCCTAAGAACCCCCCCC GGTACATTGTCTATTCTCGAACTTCAGCCTCAGACGTAAACCGTGAAGTA GAACTGGTCCGTGGAAGATGAAAGTAACTATTTTAACCGAAAGTGATTCT TCAAGTTTTATCTGGATTAAAACACTAAGAAGAGATTCATACATGAGACA CATAAAAACAAGACATAAAATGATAATTCAATTGTAAAATCAGGGCGTAT AGTAATGAGTTTGCTTAAAGGATTTCTCATCTTAATTACCTGAGAGGAAA TGTTAAGGAAGTCATTGACCAGCCCTCGTTTCTaacaaatatataaataa acaaaatcGATAAAATGATTTATTTGGTTATAATTAAATTTTAGGTAATA TGACGTATTTGGAGTTTATTGTTCATTGTTTATAGGAATTGTAAAATTAC GTAATACAATCCTCTAATTAATGAAATCAATGTCTATTGCGCGGTAATTA TTCAATCAGTCAATTACAGTATTATCATTTGCTGGTTACCAGGAGGCCTA GGAACGAAGTTATCTAATAAACATTGGCTGGTTGATAGGATTTTTAGTGA TTCGAACCTTTAACAGCTTATTTCGACAACTATCTCGAAAATCAGATCAC CAGTCAGATGAAGTTTGTCATCGTTCAGTCGGCCATGAATGCCATGAATT ACTGTGTCGTGGTGAAACGTAATAGGAACGGTTTTAGGATggtaaaacga acaaaaaaatgcccgcgcggcaattggcgacTACGATCGAAAAAGTGTAT GCCAGTAGAATACCAAAGGATCCATACCAAGTCATTAACCAATATCACTC AGTATCTTCCTTTTATTCACAACTCACCCCTGGGTATAGAATTTCCTCCG GATATTTCTTGTTTTCCTCAGGTTCTGTCATTttctgtaaataaaaaaaa tttggggtttCCTTAGAAAATTAGCGATTCGTTCATCAAAGGTTTATA

Coding sequence (CDS) from alignment at scaffold_60:431829..445926+

>TCONS_00071245 ID=TCONS_00071245|Name=TCONS_00071245|organism=Clytia hemisphaerica|type=CDS|length=10350bp|location=Sequence derived from alignment at scaffold_60:431829..445926+ (Clytia hemisphaerica)
ATGAGGATATGGTTGGTGGGTTTTGTTCTTTCGTCGTTTGTTTTCTATCT
GGAATGTCAACCAATATCCGCAGAGCTACAGAATGGAGACACGATAAACA
ATAACAATGTGGAGGAGAATAACGAAAGGACGTTCGAGCATCAAGACGAA
TTAGGATCTGGTGGAGTTGACAGTTCTGGCGATCCTTTTGTTGATGGAGA
ATCGTTAGTGATTGTCGATGAAAAGAAGGCGTTATCAGCTGGTGGCGATG
GAAATGTTGCTGGTggagaagatgaagaagaaaaagaagttgATTTCAAT
ACTGGTCAAAAGGAACCTACTGATGACAATACCAAAACATACCAACCTGA
ACAAGAAGAACTACAGCCACAACAACCAACCAGCCCACAGCAACCACCAA
TTGAGTCTATTCATCAGCAACCACTTAAACCGCAAGTTTTTGAATCACAA
CAAAACAATGAGAAGGAATTCCAAATGAAATTAAGTAAAATTAAGAAGAT
TCCTTCCAgtaaattcgtcggttctaaaatttctcataatcaaaattttg
tgttaaataaaatacaaaatccAGCCTCGTTATCAATCAAGTTCATAATA
AAGCCATTGGAGAGCTCTTCTGAAACACCATCCAGAATAGAATCTCTCGT
GGACCAACCAACGTTGACTGAAGCAGACGATGGCTCGGGAAAAAGGGATG
ACATATCAACTGTTATAGTTAAAGAAGAGGAGGTGTCAGGAAGCGGAAGT
GGTAGCGAGGGGACAATGGCTTCAGGCAGTGGCGAACAAGAACTTGTACA
AACAGATGATACGGCTGACTCACAGAAAGTGTTGACTTTCACTCTGAAAG
CTGTATCGCATCCGTTgagattgaaaaatgaaactttgccTTCCAAGGCT
AAAGATTTGATTGCTCCAACGAATTCAAATAAACCGCAAGCCTTTCTAAA
ACTATACCACAATGAGTTTTCCAAGAAGGAATTCGTTCCTGCAAGAGAAA
TGAATCTACCAGGAAAGCAAGAGACCATCCAATCGCCAAAACAACTACAA
AATCTCTTCTACACAAGTTTGAATGCTGATTTTCATGCTAAACCTGAATT
TGGTTCAAATTACGACCCCTGGTCAAATGCTGATATCCAGAGTCTTCAGG
AAATGGCGAGCACAGCTTTAGAAGAGAATAAGGAGACAACGAAACAGGAC
TTGGCAAGCCGTAGTAAATTTGGCCAACCATCTGCGATAACCAATAATGA
CCAGATGAACGCATTGATGTATCGCGATCAGCAGTCTTACTTGGGGAAGG
TTGGAAAAGCGACAGAGTTAGAAGAACAAGCTGAAATCACCAATTTTAAA
ACACAAACTGCAGAGCCTCCTGTCGGTGATGTGGTTGGTAAGTTTGGAAA
GCCAACAATGGGAGAAATGGAATCTGAACTGTCAAGCATGCCACCATCTT
CCATGTTTGGAAATGCTGGTGAAACGTTACCGAAGAATCAGAAGATATTC
CACAAAGATAATGGAAAAGGATCACAAGATTTCGAGTCAATGGTAGAAGG
GTTTGCAAGTGAAGAATTACACCAACTGGAACATCAGAAGGTAGCTTCAA
AGAATAACGTATTTATTGGTGACTTGCCAGCAATGAACGAACAACAAACT
AAACTGTCACAAAGTGATTCTGCATCATTAATGGAGGTTCCTGAACATTT
ACCGNATGAACGAACAACAAAATAAATGAGGATATGGTTGGTGGGTTTTG
TTCTTTCGTCGTTTGTTTTCTATCTGGAATGTCAACCAATATCCGCAGAG
CTACAGAATGGAGACACGATAAACAATAACAATGTGGAGGAGAATAACGA
AAGGACGTTCGAGCATCAAGACGAATTAGGATCTGGTGGAGTTGACAGTT
CTGGCGATCCTTTTGTTGATGGAGAATCGTTAGTGATTGTCGATGAAAAG
AAGGCGTTATCAGCTGGTGGCGATGGAAATGTTGCTGGTggagaagatga
agaagaaaaagaagttgATTTCAATACTGGTCAAAAGGAACCTACTGATG
ACAATACCAAAACATACCAACCTGAACAAGAAGAACTACAGCCACAACAA
CCAACCAGCCCACAGCAACCACCAATTGAGTCTATTCATCAGCAACCACT
TAAACCGCAAGTTTTTGAATCACAACAAAACAATGAGAAGGAATTCCAAA
TGAAATTAAGTAAAATTAAGAAGATTCCTTCCAgtaaattcgtcggttct
aaaatttctcataatcaaaattttgtgttaaataaaatacaaaatccAGC
CTCGTTATCAATCAAGTTCATAATAAAGCCATTGGAGAGCTCTTCTGAAA
CACCATCCAGAATAGAATCTCTCGTGGACCAACCAACGTTGACTGAAGCA
GACGATGGCTCGGGAAAAAGGGATGACATATCAACTGTTATAGTTAAAGA
AGAGGAGGTGTCAGGAAGCGGAAGTGGTAGCGAGGGGACAATGGCTTCAG
GCAGTGGCGAACAAGAACTTGTACAAACAGATGATACGGCTGACTCACAG
AAAGTGTTGACTTTCACTCTGAAAGCTGTATCGCATCCGTTgagattgaa
aaatgaaactttgccTTCCAAGGCTAAAGATTTGATTGCTCCAACGAATT
CAAATAAACCGCAAGCCTTTCTAAAACTATACCACAATGAGTTTTCCAAG
AAGGAATTCGTTCCTGCAAGAGAAATGAATCTACCAGGAAAGCAAGAGAC
CATCCAATCGCCAAAACAACTACAAAATCTCTTCTACACAAGTTTGAATG
CTGATTTTCATGCTAAACCTGAATTTGGTTCAAATTACGACCCCTGGTCA
AATGCTGATATCCAGAGTCTTCAGGAAATGGCGAGCACAGCTTTAGAAGA
GAATAAGGAGACAACGAAACAGGACTTGGCAAGCCGTAGTAAATTTGGCC
AACCATCTGCGATAACCAATAATGACCAGATGAACGCATTGATGTATCGC
GATCAGCAGTCTTACTTGGGGAAGGTTGGAAAAGCGACAGAGTTAGAAGA
ACAAGCTGAAATCACCAATTTTAAAACACAAACTGCAGAGCCTCCTGTCG
GTGATGTGGTTGGTAAGTTTGGAAAGCCAACAATGGGAGAAATGGAATCT
GAACTGTCAAGCATGCCACCATCTTCCATGTTTGGAAATGCTGGTGAAAC
GTTACCGAAGAATCAGAAGATATTCCACAAAGATAATGGAAAAGGATCAC
AAGATTTCGAGTCAATGGTAGAAGGGTTTGCAAGTGAAGAATTACACCAA
CTGGAACATCAGAAGGTAGCTTCAAAGAATAACGTATTTATTGGTGACTT
GCCAGCAATGAACGAACAACAAACTAAACTGTCACAAAGTGATTCTGCAT
CATTAATGGAGGTTCCTGAACATTTACCGNATGAACGAACAACAAAATAA
ATGAGGATATGGTTGGTGGGTTTTGTTCTTTCGTCGTTTGTTTTCTATCT
GGAATGTCAACCAATATCCGCAGAGCTACAGAATGGAGACACGATAAACA
ATAACAATGTGGAGGAGAATAACGAAAGGACGTTCGAGCATCAAGACGAA
TTAGGATCTGGTGGAGTTGACAGTTCTGGCGATCCTTTTGTTGATGGAGA
ATCGTTAGTGATTGTCGATGAAAAGAAGGCGTTATCAGCTGGTGGCGATG
GAAATGTTGCTGGTggagaagatgaagaagaaaaagaagttgATTTCAAT
ACTGGTCAAAAGGAACCTACTGATGACAATACCAAAACATACCAACCTGA
ACAAGAAGAACTACAGCCACAACAACCAACCAGCCCACAGCAACCACCAA
TTGAGTCTATTCATCAGCAACCACTTAAACCGCAAGTTTTTGAATCACAA
CAAAACAATGAGAAGGAATTCCAAATGAAATTAAGTAAAATTAAGAAGAT
TCCTTCCAgtaaattcgtcggttctaaaatttctcataatcaaaattttg
tgttaaataaaatacaaaatccAGCCTCGTTATCAATCAAGTTCATAATA
AAGCCATTGGAGAGCTCTTCTGAAACACCATCCAGAATAGAATCTCTCGT
GGACCAACCAACGTTGACTGAAGCAGACGATGGCTCGGGAAAAAGGGATG
ACATATCAACTGTTATAGTTAAAGAAGAGGAGGTGTCAGGAAGCGGAAGT
GGTAGCGAGGGGACAATGGCTTCAGGCAGTGGCGAACAAGAACTTGTACA
AACAGATGATACGGCTGACTCACAGAAAGTGTTGACTTTCACTCTGAAAG
CTGTATCGCATCCGTTgagattgaaaaatgaaactttgccTTCCAAGGCT
AAAGATTTGATTGCTCCAACGAATTCAAATAAACCGCAAGCCTTTCTAAA
ACTATACCACAATGAGTTTTCCAAGAAGGAATTCGTTCCTGCAAGAGAAA
TGAATCTACCAGGAAAGCAAGAGACCATCCAATCGCCAAAACAACTACAA
AATCTCTTCTACACAAGTTTGAATGCTGATTTTCATGCTAAACCTGAATT
TGGTTCAAATTACGACCCCTGGTCAAATGCTGATATCCAGAGTCTTCAGG
AAATGGCGAGCACAGCTTTAGAAGAGAATAAGGAGACAACGAAACAGGAC
TTGGCAAGCCGTAGTAAATTTGGCCAACCATCTGCGATAACCAATAATGA
CCAGATGAACGCATTGATGTATCGCGATCAGCAGTCTTACTTGGGGAAGG
TTGGAAAAGCGACAGAGTTAGAAGAACAAGCTGAAATCACCAATTTTAAA
ACACAAACTGCAGAGCCTCCTGTCGGTGATGTGGTTGGTAAGTTTGGAAA
GCCAACAATGGGAGAAATGGAATCTGAACTGTCAAGCATGCCACCATCTT
CCATGTTTGGAAATGCTGGTGAAACGTTACCGAAGAATCAGAAGATATTC
CACAAAGATAATGGAAAAGGATCACAAGATTTCGAGTCAATGGTAGAAGG
GTTTGCAAGTGAAGAATTACACCAACTGGAACATCAGAAGGTAGCTTCAA
AGAATAACGTATTTATTGGTGACTTGCCAGCAATGAACGAACAACAAACT
AAACTGTCACAAAGTGATTCTGCATCATTAATGGAGGTTCCTGAACATTT
ACCGNATGAACGAACAACAAAATAAATGAGGATATGGTTGGTGGGTTTTG
TTCTTTCGTCGTTTGTTTTCTATCTGGAATGTCAACCAATATCCGCAGAG
CTACAGAATGGAGACACGATAAACAATAACAATGTGGAGGAGAATAACGA
AAGGACGTTCGAGCATCAAGACGAATTAGGATCTGGTGGAGTTGACAGTT
CTGGCGATCCTTTTGTTGATGGAGAATCGTTAGTGATTGTCGATGAAAAG
AAGGCGTTATCAGCTGGTGGCGATGGAAATGTTGCTGGTggagaagatga
agaagaaaaagaagttgATTTCAATACTGGTCAAAAGGAACCTACTGATG
ACAATACCAAAACATACCAACCTGAACAAGAAGAACTACAGCCACAACAA
CCAACCAGCCCACAGCAACCACCAATTGAGTCTATTCATCAGCAACCACT
TAAACCGCAAGTTTTTGAATCACAACAAAACAATGAGAAGGAATTCCAAA
TGAAATTAAGTAAAATTAAGAAGATTCCTTCCAgtaaattcgtcggttct
aaaatttctcataatcaaaattttgtgttaaataaaatacaaaatccAGC
CTCGTTATCAATCAAGTTCATAATAAAGCCATTGGAGAGCTCTTCTGAAA
CACCATCCAGAATAGAATCTCTCGTGGACCAACCAACGTTGACTGAAGCA
GACGATGGCTCGGGAAAAAGGGATGACATATCAACTGTTATAGTTAAAGA
AGAGGAGGTGTCAGGAAGCGGAAGTGGTAGCGAGGGGACAATGGCTTCAG
GCAGTGGCGAACAAGAACTTGTACAAACAGATGATACGGCTGACTCACAG
AAAGTGTTGACTTTCACTCTGAAAGCTGTATCGCATCCGTTgagattgaa
aaatgaaactttgccTTCCAAGGCTAAAGATTTGATTGCTCCAACGAATT
CAAATAAACCGCAAGCCTTTCTAAAACTATACCACAATGAGTTTTCCAAG
AAGGAATTCGTTCCTGCAAGAGAAATGAATCTACCAGGAAAGCAAGAGAC
CATCCAATCGCCAAAACAACTACAAAATCTCTTCTACACAAGTTTGAATG
CTGATTTTCATGCTAAACCTGAATTTGGTTCAAATTACGACCCCTGGTCA
AATGCTGATATCCAGAGTCTTCAGGAAATGGCGAGCACAGCTTTAGAAGA
GAATAAGGAGACAACGAAACAGGACTTGGCAAGCCGTAGTAAATTTGGCC
AACCATCTGCGATAACCAATAATGACCAGATGAACGCATTGATGTATCGC
GATCAGCAGTCTTACTTGGGGAAGGTTGGAAAAGCGACAGAGTTAGAAGA
ACAAGCTGAAATCACCAATTTTAAAACACAAACTGCAGAGCCTCCTGTCG
GTGATGTGGTTGGTAAGTTTGGAAAGCCAACAATGGGAGAAATGGAATCT
GAACTGTCAAGCATGCCACCATCTTCCATGTTTGGAAATGCTGGTGAAAC
GTTACCGAAGAATCAGAAGATATTCCACAAAGATAATGGAAAAGGATCAC
AAGATTTCGAGTCAATGGTAGAAGGGTTTGCAAGTGAAGAATTACACCAA
CTGGAACATCAGAAGGTAGCTTCAAAGAATAACGTATTTATTGGTGACTT
GCCAGCAATGAACGAACAACAAACTAAACTGTCACAAAGTGATTCTGCAT
CATTAATGGAGGTTCCTGAACATTTACCGNATGAACGAACAACAAAATAA
ATGAGGATATGGTTGGTGGGTTTTGTTCTTTCGTCGTTTGTTTTCTATCT
GGAATGTCAACCAATATCCGCAGAGCTACAGAATGGAGACACGATAAACA
ATAACAATGTGGAGGAGAATAACGAAAGGACGTTCGAGCATCAAGACGAA
TTAGGATCTGGTGGAGTTGACAGTTCTGGCGATCCTTTTGTTGATGGAGA
ATCGTTAGTGATTGTCGATGAAAAGAAGGCGTTATCAGCTGGTGGCGATG
GAAATGTTGCTGGTggagaagatgaagaagaaaaagaagttgATTTCAAT
ACTGGTCAAAAGGAACCTACTGATGACAATACCAAAACATACCAACCTGA
ACAAGAAGAACTACAGCCACAACAACCAACCAGCCCACAGCAACCACCAA
TTGAGTCTATTCATCAGCAACCACTTAAACCGCAAGTTTTTGAATCACAA
CAAAACAATGAGAAGGAATTCCAAATGAAATTAAGTAAAATTAAGAAGAT
TCCTTCCAgtaaattcgtcggttctaaaatttctcataatcaaaattttg
tgttaaataaaatacaaaatccAGCCTCGTTATCAATCAAGTTCATAATA
AAGCCATTGGAGAGCTCTTCTGAAACACCATCCAGAATAGAATCTCTCGT
GGACCAACCAACGTTGACTGAAGCAGACGATGGCTCGGGAAAAAGGGATG
ACATATCAACTGTTATAGTTAAAGAAGAGGAGGTGTCAGGAAGCGGAAGT
GGTAGCGAGGGGACAATGGCTTCAGGCAGTGGCGAACAAGAACTTGTACA
AACAGATGATACGGCTGACTCACAGAAAGTGTTGACTTTCACTCTGAAAG
CTGTATCGCATCCGTTgagattgaaaaatgaaactttgccTTCCAAGGCT
AAAGATTTGATTGCTCCAACGAATTCAAATAAACCGCAAGCCTTTCTAAA
ACTATACCACAATGAGTTTTCCAAGAAGGAATTCGTTCCTGCAAGAGAAA
TGAATCTACCAGGAAAGCAAGAGACCATCCAATCGCCAAAACAACTACAA
AATCTCTTCTACACAAGTTTGAATGCTGATTTTCATGCTAAACCTGAATT
TGGTTCAAATTACGACCCCTGGTCAAATGCTGATATCCAGAGTCTTCAGG
AAATGGCGAGCACAGCTTTAGAAGAGAATAAGGAGACAACGAAACAGGAC
TTGGCAAGCCGTAGTAAATTTGGCCAACCATCTGCGATAACCAATAATGA
CCAGATGAACGCATTGATGTATCGCGATCAGCAGTCTTACTTGGGGAAGG
TTGGAAAAGCGACAGAGTTAGAAGAACAAGCTGAAATCACCAATTTTAAA
ACACAAACTGCAGAGCCTCCTGTCGGTGATGTGGTTGGTAAGTTTGGAAA
GCCAACAATGGGAGAAATGGAATCTGAACTGTCAAGCATGCCACCATCTT
CCATGTTTGGAAATGCTGGTGAAACGTTACCGAAGAATCAGAAGATATTC
CACAAAGATAATGGAAAAGGATCACAAGATTTCGAGTCAATGGTAGAAGG
GTTTGCAAGTGAAGAATTACACCAACTGGAACATCAGAAGGTAGCTTCAA
AGAATAACGTATTTATTGGTGACTTGCCAGCAATGAACGAACAACAAACT
AAACTGTCACAAAGTGATTCTGCATCATTAATGGAGGTTCCTGAACATTT
ACCGNATGAACGAACAACAAAATAAATGAGGATATGGTTGGTGGGTTTTG
TTCTTTCGTCGTTTGTTTTCTATCTGGAATGTCAACCAATATCCGCAGAG
CTACAGAATGGAGACACGATAAACAATAACAATGTGGAGGAGAATAACGA
AAGGACGTTCGAGCATCAAGACGAATTAGGATCTGGTGGAGTTGACAGTT
CTGGCGATCCTTTTGTTGATGGAGAATCGTTAGTGATTGTCGATGAAAAG
AAGGCGTTATCAGCTGGTGGCGATGGAAATGTTGCTGGTggagaagatga
agaagaaaaagaagttgATTTCAATACTGGTCAAAAGGAACCTACTGATG
ACAATACCAAAACATACCAACCTGAACAAGAAGAACTACAGCCACAACAA
CCAACCAGCCCACAGCAACCACCAATTGAGTCTATTCATCAGCAACCACT
TAAACCGCAAGTTTTTGAATCACAACAAAACAATGAGAAGGAATTCCAAA
TGAAATTAAGTAAAATTAAGAAGATTCCTTCCAgtaaattcgtcggttct
aaaatttctcataatcaaaattttgtgttaaataaaatacaaaatccAGC
CTCGTTATCAATCAAGTTCATAATAAAGCCATTGGAGAGCTCTTCTGAAA
CACCATCCAGAATAGAATCTCTCGTGGACCAACCAACGTTGACTGAAGCA
GACGATGGCTCGGGAAAAAGGGATGACATATCAACTGTTATAGTTAAAGA
AGAGGAGGTGTCAGGAAGCGGAAGTGGTAGCGAGGGGACAATGGCTTCAG
GCAGTGGCGAACAAGAACTTGTACAAACAGATGATACGGCTGACTCACAG
AAAGTGTTGACTTTCACTCTGAAAGCTGTATCGCATCCGTTgagattgaa
aaatgaaactttgccTTCCAAGGCTAAAGATTTGATTGCTCCAACGAATT
CAAATAAACCGCAAGCCTTTCTAAAACTATACCACAATGAGTTTTCCAAG
AAGGAATTCGTTCCTGCAAGAGAAATGAATCTACCAGGAAAGCAAGAGAC
CATCCAATCGCCAAAACAACTACAAAATCTCTTCTACACAAGTTTGAATG
CTGATTTTCATGCTAAACCTGAATTTGGTTCAAATTACGACCCCTGGTCA
AATGCTGATATCCAGAGTCTTCAGGAAATGGCGAGCACAGCTTTAGAAGA
GAATAAGGAGACAACGAAACAGGACTTGGCAAGCCGTAGTAAATTTGGCC
AACCATCTGCGATAACCAATAATGACCAGATGAACGCATTGATGTATCGC
GATCAGCAGTCTTACTTGGGGAAGGTTGGAAAAGCGACAGAGTTAGAAGA
ACAAGCTGAAATCACCAATTTTAAAACACAAACTGCAGAGCCTCCTGTCG
GTGATGTGGTTGGTAAGTTTGGAAAGCCAACAATGGGAGAAATGGAATCT
GAACTGTCAAGCATGCCACCATCTTCCATGTTTGGAAATGCTGGTGAAAC
GTTACCGAAGAATCAGAAGATATTCCACAAAGATAATGGAAAAGGATCAC
AAGATTTCGAGTCAATGGTAGAAGGGTTTGCAAGTGAAGAATTACACCAA
CTGGAACATCAGAAGGTAGCTTCAAAGAATAACGTATTTATTGGTGACTT
GCCAGCAATGAACGAACAACAAACTAAACTGTCACAAAGTGATTCTGCAT
CATTAATGGAGGTTCCTGAACATTTACCGNATGAACGAACAACAAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044285XLOC_044285Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071245-proteinTCONS_00071245-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071245-exon-scaffold_60-1491911889:431829..431955TCONS_00071245-exon-scaffold_60-1491911889:431829..431955Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1510915933:431829..431955TCONS_00071245-exon-scaffold_60-1510915933:431829..431955Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1575043694:431829..431955TCONS_00071245-exon-scaffold_60-1575043694:431829..431955Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1491911889:437553..439461TCONS_00071245-exon-scaffold_60-1491911889:437553..439461Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1510915933:437553..439461TCONS_00071245-exon-scaffold_60-1510915933:437553..439461Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1575043694:437553..439461TCONS_00071245-exon-scaffold_60-1575043694:437553..439461Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1491911889:439871..439950TCONS_00071245-exon-scaffold_60-1491911889:439871..439950Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1510915933:439871..439950TCONS_00071245-exon-scaffold_60-1510915933:439871..439950Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1575043694:439871..439950TCONS_00071245-exon-scaffold_60-1575043694:439871..439950Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1491911889:440868..441094TCONS_00071245-exon-scaffold_60-1491911889:440868..441094Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1510915933:440868..441094TCONS_00071245-exon-scaffold_60-1510915933:440868..441094Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1575043694:440868..441094TCONS_00071245-exon-scaffold_60-1575043694:440868..441094Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1491911889:441438..442034TCONS_00071245-exon-scaffold_60-1491911889:441438..442034Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1510915933:441438..442034TCONS_00071245-exon-scaffold_60-1510915933:441438..442034Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1575043694:441438..442034TCONS_00071245-exon-scaffold_60-1575043694:441438..442034Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1491911889:442490..442929TCONS_00071245-exon-scaffold_60-1491911889:442490..442929Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1510915933:442490..442929TCONS_00071245-exon-scaffold_60-1510915933:442490..442929Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1575043694:442490..442929TCONS_00071245-exon-scaffold_60-1575043694:442490..442929Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1491911889:443111..445926TCONS_00071245-exon-scaffold_60-1491911889:443111..445926Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1510915933:443111..445926TCONS_00071245-exon-scaffold_60-1510915933:443111..445926Clytia hemisphaericaexon
TCONS_00071245-exon-scaffold_60-1575043694:443111..445926TCONS_00071245-exon-scaffold_60-1575043694:443111..445926Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:431829..445926 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.830471 0.924918 0.449536 0.438983 0.416251 0.366289 5.73802 6.60903 4.46696 5.22734 6.95952 1.9613 1.43236 1.08909 3.08442 4.43175 9.12027 9.03058 0.608032 1.20675 4.90349 5.24086 7.89009 7.31304 10.9096 14.6976 5.11905 4.44899 1.64412 1.69457
Blast
BLAST of TCONS_00071245 vs. Swiss-Prot (Human)
Match: RDH11 (Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 7.609e-61
Identity = 128/282 (45.39%), Postives = 189/282 (67.02%), Query Frame = 1
Query:   91 TADLRNKVVLITGCNVGIGKVTALKFAQQGAKIIMGCRNMETGKQAQEEIKKQSENENVVLKKLDLGSLQSVRXXXXXXXXXXXKIDLLINNAGIMGTKFGLTVDGYEQQFAVNHXXXXXXXXXXXXXXKKAESARVIVLASTYGKLGLPNFDDVNYEKTSYRPYKSYDRSKLANVLFANELARRLEGTNVTTYSVHPGVVKTELYRDQKSITKFFMAPFRVFMKTPEQGAATTLYCALEEGIEQHSGLYFADSKLASFPGKGFDEESAKNLWELSEELVKL 936
            T  L  KVV++TG N GIGK TA + AQ+GA++ + CR++E G+   +EI+  + N+ V+++KLDL   +S+R F++  L EE+ + +LINNAG+M   +  T DG+E    VNHLGHFLLT+LLLE LK++  +R++ ++S    LG  +F ++  EK  Y    +Y  SKLAN+LF  ELARRL+G+ VTTYSVHPG V++EL R   S  ++    F  F+KTP+QGA T+L+CAL EG+E  SG +F+D  +A    +  +E  A+ LW++S +L+ L
Sbjct:   36 TVQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLLLEKLKESAPSRIVNVSSLAHHLGRIHFHNLQGEKF-YNAGLAYCHSKLANILFTQELARRLKGSGVTTYSVHPGTVQSELVR-HSSFMRWMWWLFSFFIKTPQQGAQTSLHCALTEGLEILSGNHFSDCHVAWVSAQARNETIARRLWDVSCDLLGL 315          
The following BLAST results are available for this feature:
BLAST of TCONS_00071245 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RDH117.609e-6145.39Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 ... [more]
back to top