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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071239 ID=TCONS_00071239|Name=TCONS_00071239|organism=Clytia hemisphaerica|type=transcript|length=1325bp
TTTTGAAAGTATgacttggaaatattgaaattaatCGTTATTACATTCTA
TTTTACagttaaaaataattgaaacttataGAAGAAAGATCGAGCTACTG
gtttatgtaatttttttcttcaaatatgtGCGTTTTCTTCGACATTGATG
GGCACAATTTCGTCCATGTTTAGTGATAGTTGAACCTAAACTTAAAAGTT
CACAAAGAAATACATTTTACAAAGTATTCAAAATTTAGAAGATAGTATTT
GTTTTATGGTATGAATTTATTCCAAGATATTCTAGTTCAATACTAGCAAG
TATGATAtgaataatcaaaacattatgCAACAATATTTTGACCCACAACA
ACAGGCAACTATGAACGGTGGATTCCCTGGAACTCAAGGATTTCAAGCAA
ATCAACAGAACATAAGTAGTTCAATAAATGGACCGACACCAACTTCTAAT
GCTTACATGTCAAGTGCTGCCGGCTATCAGCAAAACGGCGCTGCTAAATT
CAACAATAACACAACTTCTAATGAAAGTGGTGAAAGCTTTGATAGTAACA
ATACAGCACAGAATCCTCCCAACAGTCAAGCCCAGATGTTTCCTCCAAAC
TACATGGATCCTAGAATGGGTGGGTTTGATCCCAGAAATAGACCAAACCT
TGATCCAATGTCTTCTGGAATGGATGCATTTGGTCCAAAtacaaattttc
caaataaaatgAGAATGAATGACAATATGGCTGCTTTTTTCAACAATCCT
GCTGCAATGGCTGCACTTCAAAGGCAAAGGATGGGAATGTATGGTCAAGG
AAGAGAAAATGTAAGAATTTAACAGACCAAATTTTTAGTGCTTTAACAAA
TAGCAATGATCTGTTGAAAAccaAACCATTTTGTAAGGGGTGAAGTCATT
TGTCATATATCTTTCAGGCTAGCAGTTAGtaacactaggaaatctagctt
tcagaaaaaacaacatcagtcatctacaggatgtatttacACAAAAAGGA
TAAGAGTTttctgaatcaagttcgcaagacaattaattaaaactttgaaa
caaaataaaacgtgcagcagccaaaatcaaccaaccaaaatttgtcattc
aattcctgagacagagcttcgatttttaaggccttgtttataccctaaag
taaaaataattccgcacatgtaaatgggtcattgtttgaggtccggcaaa
atttccgggaaacagcctatccggtggtgcaCGGATTTAGGTGGGTTctg
cctcccccgtagatctttttcttgggaagttgatcttcaaattaattttc
aaggttggcttggctcaaatttttt Run BLAST on NCBI transcript from alignment at scaffold_60:365338..366662+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071239 ID=TCONS_00071239|Name=TCONS_00071239|organism=Clytia hemisphaerica|type=transcript|length=1325bp|location=Sequence derived from alignment at scaffold_60:365338..366662+ (Clytia hemisphaerica)
TTTTGAAAGTATgacttggaaatattgaaattaatCGTTATTACATTCTA
TTTTACagttaaaaataattgaaacttataGAAGAAAGATCGAGCTACTG
gtttatgtaatttttttcttcaaatatgtGCGTTTTCTTCGACATTGATG
GGCACAATTTCGTCCATGTTTAGTGATAGTTGAACCTAAACTTAAAAGTT
CACAAAGAAATACATTTTACAAAGTATTCAAAATTTAGAAGATAGTATTT
GTTTTATGGTATGAATTTATTCCAAGATATTCTAGTTCAATACTAGCAAG
TATGATAtgaataatcaaaacattatgCAACAATATTTTGACCCACAACA
ACAGGCAACTATGAACGGTGGATTCCCTGGAACTCAAGGATTTCAAGCAA
ATCAACAGAACATAAGTAGTTCAATAAATGGACCGACACCAACTTCTAAT
GCTTACATGTCAAGTGCTGCCGGCTATCAGCAAAACGGCGCTGCTAAATT
CAACAATAACACAACTTCTAATGAAAGTGGTGAAAGCTTTGATAGTAACA
ATACAGCACAGAATCCTCCCAACAGTCAAGCCCAGATGTTTCCTCCAAAC
TACATGGATCCTAGAATGGGTGGGTTTGATCCCAGAAATAGACCAAACCT
TGATCCAATGTCTTCTGGAATGGATGCATTTGGTCCAAAtacaaattttc
caaataaaatgAGAATGAATGACAATATGGCTGCTTTTTTCAACAATCCT
GCTGCAATGGCTGCACTTCAAAGGCAAAGGATGGGAATGTATGGTCAAGG
AAGAGAAAATGTAAGAATTTAACAGACCAAATTTTTAGTGCTTTAACAAA
TAGCAATGATCTGTTGAAAAccaAACCATTTTGTAAGGGGTGAAGTCATT
TGTCATATATCTTTCAGGCTAGCAGTTAGtaacactaggaaatctagctt
tcagaaaaaacaacatcagtcatctacaggatgtatttacACAAAAAGGA
TAAGAGTTttctgaatcaagttcgcaagacaattaattaaaactttgaaa
caaaataaaacgtgcagcagccaaaatcaaccaaccaaaatttgtcattc
aattcctgagacagagcttcgatttttaaggccttgtttataccctaaag
taaaaataattccgcacatgtaaatgggtcattgtttgaggtccggcaaa
atttccgggaaacagcctatccggtggtgcaCGGATTTAGGTGGGTTctg
cctcccccgtagatctttttcttgggaagttgatcttcaaattaattttc
aaggttggcttggctcaaatttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071239-exon-scaffold_60-1491911889:365338..366662 | TCONS_00071239-exon-scaffold_60-1491911889:365338..366662 | Clytia hemisphaerica | exon |
| TCONS_00071239-exon-scaffold_60-1510915933:365338..366662 | TCONS_00071239-exon-scaffold_60-1510915933:365338..366662 | Clytia hemisphaerica | exon |
| TCONS_00071239-exon-scaffold_60-1575043694:365338..366662 | TCONS_00071239-exon-scaffold_60-1575043694:365338..366662 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:365338..366662 + |
Blast
The following BLAST results are available for this feature:
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