TCONS_00071224 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071224
Unique NameTCONS_00071224
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1179

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071224 ID=TCONS_00071224|Name=TCONS_00071224|organism=Clytia hemisphaerica|type=transcript|length=1179bp
gaacaatcaaaatcaaattcttacttggaatcaattttttaatgaacatA
TACCAAATCTAACATTataaCTCGCCAACCCGGTGCACCTCTAAAATCGC
GGCAAAAAATTAAAGTGTCCAAAAAACCATTCAGCAAAGAAGGCAGGTGA
GCACATACACAAACAGTGTGTGTAAACGTCGTAACACGAAACGCAAAAGG
GGGTTGCGTGTGTGAAATAGTAGAAGAGAGACGCTtctcttcaaaaaaat
caaaaacttggATTTGTCGATATATAACTCTCAGCAACCACCAAAATGTC
GATGATCACTGGAAGTATCAAAGGTCTGCTACAGATCAAATTTAAGGCCC
GTCATGATTCGCTAACTGATCAATTTAACCGTATTTTCATGGTCAAAATG
GCAATGGTCTCCAGCATGCTGTTAGGGTTGAATTGGTTCAAAGATACAAT
GACATGCGTCATCCCTGGCACTGCTGGTATTGACAAAGGATATGTCCATG
AAGCTTGCTGGATTCAAGGCTTCTACGTTTACCGTGACTTACCTATGGTC
CAAGGAAAGATGGCTTATTATGGTATCCCAAGAAATCTTAAAGAAGATGG
TATGATGAATGGTGCTCTTTGCGAAACTGAAACAAATGCTCAATGTGAGC
CATTGGAGAAAACCTTTTATCTCCAATATCAATGGTTTCCCTTCTACATC
GCTGTCATTGGTTTCCTTTATTATCTCCCTTATGTCTTGTTCCGATACAT
CAACACAGATCTAATCAGTTTGAAAAGTAGCATCAAAGCTGTCGAACCAG
ACATTGATGGAATTGTCAAGAATTACTTCAACTACCAGATCAACCCCCCA
ATGCGCATGCGATTGAGATTATTTGCGAACATTTTCTGTAAGATTTGTTA
TCTCGTCGTTAACGTGATTGCCTTTGTTGCAACGGACAACCTGTTGAATG
GTGACTTCCGAAGATACGGTACCGAATGGATTAACTGGAGCAAACAAAGC
AATAGCAAAGCTTATGATTATACTGCTGGACGCAAACGATTGAGACCTGG
AGAAATCATGCTTCCAACATTCGGTTTCTGTGAAGTTTTGGAACTGAGCA
AAGATATCAAACACCACTTGTTCAATACACACAAATTCGTTTGCGAAATC
TCTCAGAATGTCTTATACCAATACGTTTT
Run BLAST on NCBI

transcript from alignment at scaffold_60:280001..294800+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071224 ID=TCONS_00071224|Name=TCONS_00071224|organism=Clytia hemisphaerica|type=transcript|length=14800bp|location=Sequence derived from alignment at scaffold_60:280001..294800+ (Clytia hemisphaerica)
gaacaatcaaaatcaaattcttacttggaatcaattttttaatgaacatA
TACCAAATCTAACATTGTaagtgtttttttgttttttcttttttgtgttA
TATTTTCAGTACGGTCAAAGTCACTCAATACTTTGGTTTAGATATGAACT
TGAGCTTTCTATAAGAACAGTTATCATTTGTTCAGATTCGATCGAATGTT
CGAATATTttcagttcttttgtttttctgcgGCAGATTGGCATTCTAACT
TTATACATATTTATTCTGGACATTTTAATTAAAACTCTATCACTCACTCC
ATAAATCTTATTGATTATATGTAgcctttcagaaaatttcacgaAATCGA
AATCTTTTGATTACTTTGTTCTTGGGAATTGTCACTTTTATGTTTTGTTC
TGTTTTGTCACTTCTATGTTTTGTTCTGTTTTGTCatacacaaagaaaaa
atttgttctCATACAAGAATGACAttgcatatttttcaaatacaTACACA
GACCAACTtccttgatttctttttgtgtGTGTTTACTTCTCAAGATATTC
CGGACAATCATTCTACTTCCAATCACATGCTTCTTCAAAAATAGAATTTA
TTGCTTTCTAAGTTTCTTAATGTTTTTCCGTTTCTCGTTCATCAAAGAGT
AACGTTAATGGTGACATAATTATGTCAAAAGTTATTTTCTGGAAAATGCC
TCtttaattatgtttttaaatcATAATCTTCTTCGTGTAGATGGAAATTA
AGAGAGCAGTTGGTCAAGCTTAGACGTTGGATGACTTACCAACGGGGTAC
TGCTTATTCTAACTTGATCTGTtaacattatttataagaacatccaaaca
tTTTGAACACTTTGGATGTCCGTCAGACCAACAttaaaaaaatacgaaaa
aaaggaaaataaaaaaaattaaaattaaactttttcagtttcaagccttt
tattttcaacactttgtgagtattttcgtccattttgttaagaaattggg
tgttttagactctgcaaagccttaaaatgttcttaacttgttcttgatat
tttggcctttaaagccttatgttcttatatagtttgtctctataaaaaac
gtgtaccactACTGTATTTATTCTGATTCTGTAAGTAGGTAGAATTGGGA
ATTGCTTGTTCGACCATTGTCAGCATCTTATCTTAGCATCATAGCACTGT
CGTTTTAGTGAGAGCCACTATGTTCTGAAAACACTCTTCGTGTGCAAAaa
cttgttaaaagcaaactatcttttttaaatgatcaattaggtccataaaa
tcacaaaaatgagtggtgagaaaaattttgaccattttactggtccccat
gtgacgtcatcacttttgatggggcttgaaaatgaaagtgaaaattagaa
gctcaaATATGGctcaaataaaatatatttatccAAGGATTCCAAAGAAT
ATCACAACATATACCTAATTTCAAGGTTTTCCGTAGTAATATCTTTTGTT
CCCAAGCCGGTcctttttcaaatcaaacaaaaatttttcgattccgatga
ttttttaattgccgatgacgtcatcgatgacgtcattttttgagctgtct
tcctttatagcttctcaaatatagattttcaggtatatgttgtgatattt
ttgGGAATTcttggataaatatctttcatttgagccatatttaagcttct
aattttcactttcattttcaagcttaagcaaaagtgatgacgtcacatgg
ggaccagcaaaatggtcaaaaattttcataccACTCGTTTCTGTGATCTT
Atagacctaattgatcattttaaaaacttagtttgcttttaacaagtctg
tgcacacgaagaacATTGTAGCTCTCACTATTTCTCTTTATCCATCCTCG
ACTACTCTTTATTTCGAATATCTCTTTATTTGGAATGGAACTAATTTCGT
TAGTCTGTACTCCTTAAATATTGCTTCTTCTTAATCTCGAACAAAAAGAT
GAACAGAACTCTGTATTGATATATTAAACCCTTTTATACCCTTTCGAACT
CCAACTTTGTTTTCACTCTACGCAGCATGATGATATTAAAGCATGTCTGA
AAAAGTAATTGAATGTCCTTCCTGTGACCTTTGAAAGACGTTCAAAGGAC
GTCCAATACTCTTGATCCATTATTATCCAATTTGTACGGTCAATATTATC
TTTTAATTacaaaagtcatttgctatttGTAATCCAGACTAATTACCGat
acttttctcttttttgattgaaaagaaaAGCACTGCTTCCTGAGGTTACA
TAAACCTTCGACCGTTCGTTGTTTTCTGTGAGAAAATATATAGAGAATTT
ACAGAGTTCATTTTTTGAACGTTCAGAAAATGTTGGGAATAACATCGACC
ATAGACTAGTAATAAATTTTGCCCATTTCTAAACTACACCCCGTTCTCAC
AggcccactgggaacccttcccactggagaAATCGTCCAAagtatcgtcc
ccggtggaaaattatcctccaatttttgcccccactgaaaataatcagat
aagccaatcctcactgcaaaatatgatGATTTTCTTCCCGTCCCCATTGa
actttctgacttgaaaacaaaagaattaaaatcccAAGCCATTAAAAATA
CGGGAAtaccaatccccatcgagtttcagtccgtcattttcatccccact
ggctgaaaaaatcttaccgGATTTGTGAGCTGGGGGTGTTGAACTTGAAg
ggacaaaatttttaaaaatcaagttCGCTAAAGACCACCTCATATCTACC
CGTAATAGGTCTGATAAAGCAATTTACAAATCCAGTACATTTTAAAAACG
GTGACACCAATCGCATCTTATGTTAAATTgcagaaaatataaaaacacgC
TGATTTGCTGATTGATTGTAAAAAGGAGTTACGTATTTTCGTTAGCGAGT
TGGATGTCTCACAGAAATTcttctttttgagaaaaatattttatgtttta
ggTAGCATGGCAACATGCTCTCACTTTCTTCCTCTTTGAACTTACAATAC
TGGCAAAGCCCACCTTTATACTACTGTAAAGGAGAAGTTTAAATACCAAT
CTCTCAGATACTATTTTCATAGTTGATGTTTTGATTCAAACAAATCTCAA
AACTGACCTGTTTCTTACTTAATGGAGAAACTTTTCAGTTTCATTTTCGT
ATCGGGAAATTGACGTAAAAATTATTGCTTTATTAATTCGTCGGATAAAT
GTTGGGTCGAATTCTGTTCTAGAGtttgaaagaatgtttaaatttctatt
ttgtataattttactcGTGAAATAAGAGCCTGTAattatttttatccttt
ttgatcaaaattgaGGTATTAAAGGCTTTATAACCAATTTAACCACTTTG
ACCTTTAAATTGCTTCAAATTCAGCAATTCCAAGTATAGAATTgtcctta
ttttttggcaaatttgagcTTCATTCTTCTCATAAAACTATTGTAAAAAA
TTTAACGTTCTTTTTCTCGTGGAAACCCTTAGAGCATTTGTCCCACTTTT
CGATCCCACGACAAATTTTTCTCGCACTGTATACCTTTACTCATGACTCG
TCATCTAATGACACAAATAAAATGTATTTCGTATCGACTCGATCCAACAT
TGTTATCGAACTCTGACGAAAGCATTGCTAAGGAGTACTTAATTGATCTC
TTTTAACTGGTCGGTGTAAATTTAAATAGTCACTATTTCACTTTGTACTA
TGTAGCATGTCATAATATTACCATACGTTACGAGAAAAAACGCTGATGCT
TTCTCTTTTGTGTTATTACGTTGCATTCagcttttttgttctttttgtct
tttcataaaaatatgttGTTTTGCTATTTTCGTTTTCCTGTTTCCTTAGC
CTCAATATCTTTGACCTTGTTTTTCCTTTCGTTAATGTTTCTTCGTACAA
GGTTTTCTTATCTTATAAGAacgatttttttaagaacacgAGAAGTTCAT
NGAATtgtgcttattttttggcaattttgagcTTCATTCTTCTCATAAAA
CTGTTGTAAAAAATTTAACGTTTTTTTTCTCGTGGAAATCCTTAGAGCAT
TTGTCCCACTTTTCGATCCCACGACAAATTTTTCTCGCACTGTATACCTT
TACTCATGACTCGTCATCTTATGACACAAACAAAACGTATTTTGCCATTC
ATAAACTCGTTCTAACATTGTTATCGAACTCTGACGAAAGCATTGCTAGA
GAGTATCACCCTAGAGAGTATTTAATTGATCTCTTTTAACTGGTCGGTGT
AAATTGTCACTATTTCACTTTGTACTATGTACCATGTCATAATATTACCA
TACGTTACGAGAAAAAACGCTGATGCTTTCTCTTTTGTGTTATTACGTTG
CATTCagcttttttgttctttttgtcttttcataaaaatatgttGTTTTG
CTATTTTCGTTTTCCTGTTTCCTTAGCCTCAATATCTTTGACCTTGTTTT
TCCTTTCGTTAATGTTTCTTCGTACAAGGTTTTCTTATCTTATAAGNCTG
TTTTCCCTTTCGTTAATGCTTCTTCGTACAAGGTTTTCTTATCTTATAAG
AACGATTTTTTTAGGAAAACGAGAAGCTCAATTTTGGCAAACAGTCCTTT
TATCTTCGATATCTTCAGTAAGATTCTAGCGATTCTGTTGGCCAAAAGAC
ATCACATGGAGCTGTGCAGTGTGGGATATGCACCGTTTCTGCCCTACTCA
CAatatataaagaaaaaagaagacattgcattttACTAATGCGCTTTCGA
ATGATTTGTTCGAATtcaaatgttttgttttaaagAAATTAGAAAACGCA
CGAGGCAAGAGGACGAGAACAGAAGAGTAGATACGTTTGTGACAATGGTT
CAAGATACAAAAaacgatttttatttttcttgagtttatacactacaggg
tgtccctaattaaagtaccgagtttgaacatgcgattgagtagaaagttt
tatgtgcgtgttcacaaaattgtattttaagctctccctcttttttcttt
gtcattacgattaatttatacgttgtaactaccttttgtaataagcctgt
gtgatgcagaacgttcttatattttagcgataacacacacaaacttttct
actcaatcgcatgttcaaactcgatactttaattagggacaccctgtact
gtATGAGTTTGTATTGTGCATTTTCGCTTTGAGTTGCGATGCTATAAAAT
TTCACATTATGATTTACTTTTGTTACTTTGTAGCCTTTTAATGTAAGGAA
CTTAAAGATTTTTGTTGCTTGAGCTATTGGGACACATGAAAGGGGCGCTT
CAGCGGGATAAATCCGTCAGTTTTAATTGATCAAtatattagaaaaaaaa
tttatgaatcttaaaatcaaaaaatttgaaagatcaaATTCTTACATTTT
CAAATCTATACTCATACATATCTTCCTACTCTGATATTTGCGAAATGCCT
TCCTATACTACTACGCATCATCAGGGGAAAAAGACCGAAACTTTAAAACG
GTTGCGAAGCTGTACAAATAGCCTTCAAAGGGTACATTTACTGTTAATTG
AACGACAgcgatttttgacaaaaactcaatttgacaaaaacaaaaatgat
attcTCTCTCATACACTATATTATATTGACTATAGCACAAACTTCTAGAG
TAATGTAATGATTAAGCAATGGAGTAAcgtatttcaattattttaatgag
ttgcatttctttttgatttcatgAAAATGTGATTCGGTAATTTGCTatgt
cattatttttcaattaagagcgccaattatttttcttaatcagtATAAAT
TCTAGAGCAAATTAGaacgaagaaaagaaaaaaaattattttgattgatC
AGATTAGCGCACTAAATTGTCTGGTGTCCGAAAGAGTTGTGAAGGTAAGG
GCTTTTTTCACTGGCATAAATTCAAATGTGATGAtgtttgtcaatatttt
tgaagccttcgtatatgttctcaactttttgagcctaaaaatgtacttaa
ttcaccattttgtgagtatttttctttgtgaaatttcctaagaaattcgt
agTTATATGGAATTGGGTGTTCTAAATTTAGATTCCATAAACTCTAAATa
ttcttaaactttttcttaataATTTGGCTATCAAAGCTTTATGTGCTTAT
GTAGTTATTtggttttataaaaaacatgtttatGAATATCTGTCAATTCA
TTTTGATGTAAATTCCTGACTGTTTTCTTTCTACCATACGCTGTGGTCAG
ACTTTCCAACCTTTTGCTAACCATATAAAGTCGCATTTTATCAGGACGAT
GTATTTATCCAATTTATCAGTTCAAAAAATGATTAGATTAATATAAAAGA
AAGACCACCACTTTTCTGATACATTCAACCTGCAAATAAACTTAGTCTAG
AACAAGtttgaatttaaagtttttttgctgcCATTCACCACAGACATATG
AACAGTTAGAAAGACTCACAATGACTAACTGTTCATATGTCTATGCATTC
ATTTACATGGAAATCTTGTTTAAAAGTCACTGCTACTCGATCACAGATCA
CTAAGAGACAACTCtgagggacaagctggagtttttacaagctcttattt
gatttggttggtcgttaactagtaataaaacaattttgttactttttcta
aagaacgcgtcatctctatcacttcaaatgaccaattagtgaagtatctt
ataaaaactccagctcatcccaactCTGAGGGCTTCAAAAAGCTTTTCTT
TGGTGTATACACGtcattctttattagaaaatttttgaagcctccggatg
ttcttaactttttgagagtttcaagcctaaaagtgttcacaacatgttct
tattttccccattttttatgtatttttgtccattttcctaaaaaattagC
TGTTTTAAGAGTCcgtaaagctttaaaatgttcttaacttgttcttaaca
tttttgccatcgaaggctcatgttcttatatagcttgttcttataaaaaa
cgtataatcttataaaaaatctaGACTTTTCGTGCCATCTCACTGCGTCT
TAGTCAGATTTGTATTTGCGATAAAAAAAATCATCGTAGCATGCTTAAAG
aagcatttttcttttaaaataagaTGGCTTTCAGCATTCCTTCTTTTGTG
CTTTTTAATAACAGCCATTATGCGAATGGTTTATGATCGATTATGCGTCG
GTTGGTCATATTCAATAGACTCTATTGTATAACGCAGTCATTACCGGAGT
GATTTTATCGTTTTCATTGATGACACTCTATTGTAAAACTTTACAATTGA
TtgcttttattgttgttttgttctattgacttcattttttttccattaGT
TTTAGACTCTTGCTTAGTTTAGAACTTCTCCTTCTTATGGTCAGACATAC
AGTCTGTTCTGTTGTccaaattgttattttttctaaaagtgagttaattt
ttgtttttgtttacttttcgtctttgttttttgttgttgttgtttctttg
gctttttttgtttccattttcttttgttttgatttgtttcgtTTATTCAG
AATTAGGGTTGTGGtgaaattgatcatttctcgtAAATGATGTAACTGAT
TTCAGAACAATTCATTTCGCAAACAGATGGCATTGTGATTAATGATCTTT
TTCACCTAAACATCAATGGAAATACAATTTCTTTGAATGTCAGCATATTt
tagaaatgtttgtttgtgaaatcactttttcattttacttcaattgaaaa
tattaaaataacgagtctgctaaatgacgtgccctacgtgcccacgtgcc
ctcatttttttgacgtgccttcgtgccctacgtgccttaCGTGCCTTCGT
GNCAATGCTCCAAAAAGTACTTGAATATACTTGATTTTCAATGACTAAAA
TCGCTGGCCACCCTGTAATacagagtctgctaaatgacatgtcctacgtg
cccacgtgccctcatttttttgacgtgccttcgtgccctacgtgccttac
gtgccttcgtgccttACGTGCTCAACGTGCCTACGTGCTCGCGTGCCCTC
CGAAATTTTACGTGCCCGACGTGCTTACGTGCTTGCGTGcccaaagtttt
gacgtgccctcgaattttgacgtgccctcaaattttgacgtgccctcaag
ttttgacgtgccctcgaatttcgacgtgccctcaagttttaacgtgccct
caaattttgacgtgccctcaaattttgacgtgccctcgaattttgacgtg
ccctcaagttttgacgtgccctcgaattttgacgtgccctcgaatttcga
cgtgccctcgaattttgactcTCCTATGAATTCTTCTGTGAAGTTAAACT
GTTCCTCGTTTTGCACacaaaaatcgcaaaaagtcGACACAAAAGACAAA
agagtaaaaatcaaaaatcaccgtATTTACTTATCATCATATTGAGTACA
CCACACGCTTCACAGCTTTTAATAAGATTGTCCTTGAAGTCCTTGAATAT
ATTCGCGAAAGCCATCGTTTTCGAATGTCGCTTATTTACACATAAGAATA
TCGTTGATTTAGAGTCTATGTAATGTTCTAGTTGGTGAGTTtgggagttg
gggagttgctagtttcgagttggggagttcgtaaaactttagggcgaccg
aaaattttctaatttaaacaaatgtagcccaaaagtacaaatttcaaatt
agccagtaccaaacatattattgactttaagattatgaaaatggtaaggt
gctggctagcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNtgctggctagcaaagccaaaatactaAGTACTGTTATGTGAT
TGTCATAATGCTGACAACATGacacgttcttgtaaaaatattgacaaaat
ctttaaatacaattattgtcaaacaaattccccaaaaaatattgatcata
ctgcaagcgatgcttattgtataaaaggatataagttgacagtcatctta
GCCTCAAAAAAGTCTTAGATATAGCTTAtatagagctagaaaaataatga
cactttcttttgtcattttatcattggaattgacactttttaataaaaat
tttgatcacattataaaatacaatggttNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNtatactcaatgtgatgcagga
aatataaatggatatgaattgacagtagaaaatagctCTCCGTGCTCTCA
Cctctcagcgcacgtgtttaaggcaataagcatattacaggtggcatatg
tattatacgtattatgtgtgttatatattactctcattagtcatattaca
tttactttcaaaatcgtacttttgatatatgttattctttttcggtagcc
ggtaattttttaactccccaactcgaaactagcaactccctaactcgcga
ctagaatagtttccaaactcgttgatttactattttctttttaaagtcta
ttcacgataagtgtgcactcttttttcatttacctataacttttgaagga
attcttcaatctttataaatttggtatcattggaaNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNtatctttccaatgataccaaacttataaagattgaagaattcc
ttcaaaagttataggtaaaagaaaaaagagtgcacacttattgtgaacag
actttaattaAAAGTGCAGACACAGACAATTTGTATAAGAAAATGTGGTG
TTTAaagaaacttttctttttggtcaGCGGATTTAAGATTTTCAGCGTCA
CTGACTTTATGATGTTTTACTTAAAATATTCTCCTTAAAGTGGAGACAAC
ATACaccattttttaatagaaatttccaaaaaatttggcatcgaattaaa
aaagtttttatataggaaacaaaaaactatgagactgtctttgtgcaaaa
tttcaagttgtattTCAATGTGATGCTTAAGATTTGAAGGGATTTCTAAT
GCCATACCTCTATTAAAATCTTAAAAAATTCCTTCCTATTTCAGAAAGTT
CTTATAATTAATACTATATCCcctaacttgaaataaaaagagaGCCAGCT
GATAAAAAGTAAATAGCATGCGTCTcacatattttctcttttttcaacca
atcagaaaagttctttatttagTTTTGGTTGATTTGCACGTCCAAATtgg
agggcacgtcaaaattggagggcacgtcaaaattggagggcacgtcaaaa
ttggagggcacgtcaaaatttgagggcacgtcaaaatttgagagcacgtc
gaaattcgagggcacgtcaaaacttgagggcacgtcaaaatttgagagca
cgtcgaaattcgagggcacgtcaaaacttgagggcacgtcaaaattcgag
ggcacgtcaaaacttgagggcacgtcaaaacttgagggcacgtcaaaact
ttgggCACGCAAGCACGTAAACACGTAAGCACGTCGGGCACGTAAAATTT
CGGAGGGCACGCGAGCACGTAGGCACGTAAGGCACGCGAGCACGAAGGCA
CGtaaggcacgtagggcacgaaggcacgtcaaaaaaatgagggcacgtgg
gcacgtagggcacgtcatttagcagactctaaAATAACCATTCTCAAAAA
TGACCAATTAAACAAATAGTATGGTTTACAAACTTTTGAGGTTGGTTGAT
TTACAATTGCTTggtattcgaaaatctaatcgTACCATTCAAGATTATAA
GTTATCTGCACGCCCTTTGTTTGAATTTTGAGGTTACCTTTATTTATGAT
TATGAAACAATCTTTTCTCGATCCTTTTAAAATTCCGTATCATGTCAGAG
GTTTCGATATTTGGTATCATTCAATCCTTTTAAATCCATTTAAAAGTGGC
TTTTCTACACGTGTACAAATGAAAAGACTTTTGACGAGTTTTTTTTCTCT
GTTGAATCTCCTGAGTAATATTTGAATGTAATTACGTTGTTTTAAATCGA
GTTTTTAAATCATGATTTTAatatttctctttctttctttctttctttct
ttttgtatctTTAACTTTACTATAAATTCCAAATGAATGggtttaaaagt
tttttgttaTATATTTCTTTAGTTTACGTCTACTTTCAtggtctttttaa
agttttagcgcgtttcttaatatttttaccAAGTTAGAAATCAAGCTTTA
AAATTCTTCTACCGTTTCTTTTTAACATAATCTTAGAGGGTTTGGGTTTC
CAACTCGTAGTTTAGATGAATAAATGGCATCAGATATtgattagaaaatc
aaaaatactaTAATGCACATATCACATTTAATATTCCATATTCCGTATCT
ACATTGAATACCCTGAAATAAATGTgacattttatttcttttttcagata
aCTCGCCAACCCGGTGCACCTCTAAAATCGCGGCAAAAAATTAAAGTGTC
CAAAAAACCATTCAGCAAAGAAGGCAGGTGAGCACATACACAAACAGTGT
GTGTAAACGTCGTAACACGAAACGCAAAAGGGGGTTGCGTGTGTGAAATA
GTAGAAGAGAGACGCTtctcttcaaaaaaatcaaaaacttggATTTGTCG
ATATATAACTCTCAGCAACCACCAAAATGTCGATGATCACTGGAAGTATC
AAAGGTCTGCTACAGATCAAATTTAAGGCCCGTCATGATTCGCTAACTGA
TCAATTTAACCGTATTTTCATGGTCAAAATGGCAATGGTCTCCAGCATGC
TGTTAGGGTTGAATTGGTTCAAAGATACAATGACATGCGTCATCCCTGGC
ACTGCTGGTATTGACAAAGGATATGTCCATGAAGCTTGCTGGATTCAAGG
TATATATGATTTATTGTTTACACTGTGTTTAGACTTTGGTGCTTTTATCT
CTGAAATTTACCAGATTTTCAGTAGATGAATGTGTAGCAGTTTTTTGTCT
CAATTTTAAATTCACAAGGAATAAGATTTGAAGGGAAATAGTTTGGTTAG
CTAAGCGGAGATAAGATAAAGAATTGATAGTCATTTGATCatatgtttat
tttttcaaataggtGGTTTTAACAGGTTTTAAGCCATTTTTAATGAGGGG
TTTAGTGGCTTTTACATATGTATACATTTGCTTTTTCCCGGACGATTNAT
TTTTTTTAATGAGGGGTTTAGTGGCTTTTACATATGTATACATTTGCTTT
TTCTCGGACGATTTTATTTGCTCcgctaaattgtaaaaatgtcGAAAGAT
AACGGTAAAACATGTGGTGTAATGTCATAGCAACTTCTTCAAAAACgctc
tttaaaaatttaaatttgaaaatgaagatgaaaaatcttGTTAAATAAAA
CATTTATCAATGAAAGAACAATAGCCAGAAAGAATAgcacgaaatttgta
aacactATACTGAATTTTCTTACGATTGATTCATTATTTAGAGCAGCCGA
AACAGTTATATCATTCAAAAGTGCGTGTATTGTAAAGCGAAAAAATTTac
cttctttttataagaaaatttcctgaaaattcAAGTCAGTTTATCGATTC
TTTTAAAAAGATTCACAACTAATAAATCAATATTCTCGAGAGAATTTTCG
TCCGAAAATGAAAAGACTCAGTTAATAGTCAGAATAAAGCTCCATCTAAA
ACTAACAAAGAACTCGGTAGCCAAAAGAATTTTCTTAACTGCTAATGCGG
TAGAAACTTAAACTCGAAACTTTGGTCTTTTCCTCCTGTTTCTACGTTAT
CATCATTATACTTTCCAAAGTCATTTCCTTTTTTCTACGTCAACTATTTC
GTTTAATTAAAAGCACATTTTCAAAGTATGCGTTTAAATAGTCACTTCCT
CAGCCTTTTCTTTTAAACCACCACAGTTTGTTATGGTTTCCTCTTTGTAA
TTTACCtttaccagaaaaaaaccattacaTTGAGAAATCAAATCTTCATA
GATATCTTTGATTTAtcataaattcaaaaatttgatattgAATGAGAATA
CCACCTTTATACGCTTTAAAAGCCTCCATAAAATCCCAAGAGAAGGAATT
TCAAGGAATGTAAACGTACACTATTGTGCATTCTCAGACCTCAGTACAGT
CACATCTGATGATTACTCAATATCATATTAGACTCATTCTTGTCCGTATT
TTGATGATATTAAACTTGCAATTCTTTGCTTTTCATTAGGCTTCTACGTT
TACCGTGACTTACCTATGGTCCAAGGAAAGATGGCTTATTATGGTATCCC
AAGAAATCTTAAAGAAGATGGTATGATGAATGGTGCTCTTTGCGAAACTG
AAACAAATGCTCAATGTGAGCCATTGGAGAAAACCTTTTATCTCCAATAT
CAATGGTTTCCCTTCTACATCGCTGTCATTGGTTTCCTTTATTATCTCCC
TTATGTCTTGTTCCGATACATCAACACAGATCTAATCAGTTTGAAAAGTA
GCATCAAAGCTGTCGAACCAGACATTGATGGAATTGTCAAGAATTACTTC
AACTACCAGATCAACCCCCCAATGCGCATGCGATTGAGATTATTTGCGAA
CATTTTCTGTAAGATTTGTTATCTCGTCGTTAACGTGATTGCCTTTGTTG
CAACGGACAACCTGTTGAATGGTGACTTCCGAAGATACGGTACCGAATGG
ATTAACTGGAGCAAACAAAGCAATAGCAAAGCTTATGATTATACTGCTGG
ACGCAAACGATTGAGACCTGGAGAAATCATGCTTCCAACATTCGGTTTCT
GTGAAGTTTTGGAACTGAGCAAAGATATCAAACACCACTTGTTCAATACA
CACAAATTCGTTTGCGAAATCTCTCAGAATGTCTTATACCAATACGTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044277XLOC_044277Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071224-exon-scaffold_60-1491911889:280001..280066TCONS_00071224-exon-scaffold_60-1491911889:280001..280066Clytia hemisphaericaexon
TCONS_00071224-exon-scaffold_60-1510915933:280001..280066TCONS_00071224-exon-scaffold_60-1510915933:280001..280066Clytia hemisphaericaexon
TCONS_00071224-exon-scaffold_60-1575043694:280001..280066TCONS_00071224-exon-scaffold_60-1575043694:280001..280066Clytia hemisphaericaexon
TCONS_00071224-exon-scaffold_60-1491911889:292348..292799TCONS_00071224-exon-scaffold_60-1491911889:292348..292799Clytia hemisphaericaexon
TCONS_00071224-exon-scaffold_60-1510915933:292348..292799TCONS_00071224-exon-scaffold_60-1510915933:292348..292799Clytia hemisphaericaexon
TCONS_00071224-exon-scaffold_60-1575043694:292348..292799TCONS_00071224-exon-scaffold_60-1575043694:292348..292799Clytia hemisphaericaexon
TCONS_00071224-exon-scaffold_60-1491911889:294140..294800TCONS_00071224-exon-scaffold_60-1491911889:294140..294800Clytia hemisphaericaexon
TCONS_00071224-exon-scaffold_60-1510915933:294140..294800TCONS_00071224-exon-scaffold_60-1510915933:294140..294800Clytia hemisphaericaexon
TCONS_00071224-exon-scaffold_60-1575043694:294140..294800TCONS_00071224-exon-scaffold_60-1575043694:294140..294800Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:280001..294800 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.12547	0	0	0	0	2.17784	1.61785	2.13774	1.32884	0.326372	4.74636	9.66158	6.85241	1.4885	0	0	0	0	0	1.76155	0	0	102.548	42.7531	0.138878	0.305033
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071224 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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