TCONS_00071172 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071172
Unique NameTCONS_00071172
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length868

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071172 ID=TCONS_00071172|Name=TCONS_00071172|organism=Clytia hemisphaerica|type=transcript|length=868bp
tttgatctgaGCGATATGGATTTACGTTATAAAAGCTTGAGACAGAAGGG
AAACTTAGTAGTAGGAGATTTTGTAACTGTTGTTCAGACTTTTGTGGAAT
TGAGGGGCTAGTTGAGGATCAACTATAATTTTTGGACATGGCTCGTGAAG
AATATagACCGTACGGCCTGATGGAGAAAGAATTAGAAGAGTACCGCAAA
TATTTTTGGCAGCAGGACGTTGACGGAGACGGTCAACTATCAAAGAATGA
ATTCAATAACATGTTACGTACAATGGGTTTGAATCTTACTCGTCAAGAAG
TTGAAAATTTATTCGCCAAAACTGACGTTGATAAAAATTACAGGATCAGC
TTCCATGAGTTCGCCGAAGCCTTCATTGCAAAGAAACGGGAACATGTGAG
TGGCGATCGGCTACGACGCGTCTTTCAAGAGGCCGATCGTGACCGTGATG
GTTACCTGACAACAGATGAGTGTTTGGCCGCTTTAAAACAACTCGGTCAC
GTAATGGATGATAAAGGCATACGACGTGTGATGGGTTTGATGGATAAGAA
TAATGACGGAATGATAACGTTTCAAGaatTCTGCAAGTTCATGGCTTAGA
GGTTGGAACGTTCGATGGAAGGATTGGATTTTCATAAGCCAAAAGGGATG
GCTTTTTTGTATATAGTTACTTGTAAATGTGGTTAAAATTGTTTCAATAA
AAGAAAGTCTTTAACTTCCAAGCTTCTACTCTGGAACGCgtttaatgttt
tttaatgACACCCTATTCCTTAGCTCTGGTTTAGTCGGCCCACTTTTAGC
CCACTTTATGCCAACTCtagcaattagaataggcagggctaAAAGTGGGC
CGACTAAACCAGAGCTTA
Run BLAST on NCBI

transcript from alignment at scaffold_6:199705..212268-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071172 ID=TCONS_00071172|Name=TCONS_00071172|organism=Clytia hemisphaerica|type=transcript|length=12564bp|location=Sequence derived from alignment at scaffold_6:199705..212268- (Clytia hemisphaerica)
TTTGATCTGAGCGATATGGATTTACGTTATAAAAGCTTGAGACAGAAGGG
AAACTTAGTAGTAGGAGATTTTGTAACTGTTGTTCAGACTTTTGTGGAAT
TGAGGGGCTAGTTGAGGATCAACTATAATTTTTGGACATGGCTCGTGAAG
AATATGTAAGTCTTTTAAAAACATTTCACTACTTTAACCAGCTAAGCTGT
TCTTTAATAACACCCACTTCTTACAGACCCGGGTTTTTTGAGCCAAAATA
ACGGACCGAAACTCGAGGGGATTGATATTCCTATGTTATTTCATGGCTGG
GGATTTGATGAATTCCATTGTTTTCAAGTCAGAAAATTCACTGGGGATGG
AAGAAATACCACAATATTTTGCAGTGAGGATTTGCTTATCTGATTATTTT
CAGTGGGGACAAAAATTGAGTATAATTTTCCACTGGTAACGTTATTTTGA
CCAATTTTTCCAGTGGGAGGGGGTCCCAATGAGTCTGTGAGAAGGGGGTG
TTTAATACGGCCAATGACATATTATCTGGTAATATAGCTTTCTGGGTTTT
CTTTTAACTTTTATGATTTTGGTTCCTACAGTGTTTGAGGCCCGAAAATT
CTGTTACCCAATGGGCAAGTTAGTGAGCTCCAAATTTTTCTCCAAAACGA
AAAATGTCATCCTTGTACAAAGTCTTGGCAGCTTTAAAACATACCTCTCC
GGAATTCTGAGAAATTCGAATCATGGGAACTTTCTTTTCCCCTGGTGGGG
GACCTTCCAAAAGTTATTCAGTGGAGGTAGATTACAGAAAAAAATAGTAC
GCATCGACTAGCAAAGTCTTTTTTCAGAATGTATTCATGATATTCATGAC
GTAATGTTGTATAAGGAAGCACCCAAAATAGCCCAGGAGTTCTCTTCTAG
TTTTCTATTGTTTAATTTCAAATTAGTTGCACATACCCGGTTTTCTCTGG
ATGCTTCCGTATGAAACATTACGTCATTACGCCATGAATATCATTAATCA
AGAACAGTGACTTGTCAATAAACATTGATCGATTACAAACAGTTCTATTC
CACGACCGATTGTAGATATGTGTAAATTCTTTTTCCACCGGAGTTAAAAA
GACTGAAATCTTTTAAAATCTAATACGTACTGTCGTTTAATTTCACTTCC
TGCACTAAGATTCTCCTTAATTTTCAGGGACTTTTCCGGCATGCACCGAC
GTGAGATTGGAAAGGGTTTTTTTCTAAAGTTATGGAATATATTGTGAAAC
TTTCCGAAGCTCACTTTTCAACTACCCGGAGTCCTGGACTTTTTTCTATA
GAAAAGTGGAAGTGGAGTTTTAGTACGGGAAAATATTTTATGCAAAATGA
CGGTATAGTTACTTTGTGGTGGCACTTATAATGGAGCCGATAGGAGTTTG
TGGTGGCACTTATAACGGAGCCAATAGGAGTTTGTGATGATAACGTGTGT
TTCAACTAAAAACTCCTATCGGCTCCATTATAAGTCCCACCACATACCTA
AGTATGTCTATCAAGAATAATGACTCATTGATTAATAGCATCACGTCTGA
GGAAGGGATTTAAAAAGAGATATTTCCCTTACGCAAAGCTCGTTAAAAGT
TGACTGAGCGAATTGCGACCAATTAAGGTCATTATACTTACCATGGCAAT
TTCGTTTCGAGAAAGGCAGCTTAATGTGAAAGATAAAATTTTCTTAATGA
TAAGGAAAAGTTGAAGGTATTTTGAGTTTTGGACTTGTAAAGAGACGGAA
TCTTAGTGTTGTTTTTTTGTTTTTACTTAAAGATGTCAAATACTCAAGTC
CAACAAAATGTAAGATATGCCACTCATACTCTAAGGTCCCGAATAGGTGG
GGTCCGAATTTGTATCTCCAAAAACAGTAACGTAGACAGGAGGGGCGCAA
AATTTGTGTAGAAGAGCAGATTTTTATGACACTGTAATTATCTTTTCATA
ATGTAAAAAGATAATTACAATGTCATAAAAATCTGCTCTCCTACACAGGT
TTTGCGCCCCTCCTGTCTACGCTACTAAAAAACCCACAATGATAAGGTAC
TTATAAGCTACAACCAGGCTATTGATAGCAATTCAGCCTTTGATAGCTGA
AAATATTTTCCAAAAGAAATTAACAGCGGGTCCTAATAAGCATAGGCGTA
GCAAGATACCCTGCAAAATTTATGGATGAGAGCGGTTTTTACGACACTGT
GATTATTGTCTTTATTATATGTCATAAACGTCTGCACTCCCTCATAAATT
TTGCAGGGTATCCTGCAGCGCCTATGATAAGAACGGGGACCTTTGAGTAC
TTTGTTATTTGACGTCAGAACAGATCAGTCGCGCTCTTCATTTTTTTTTA
AATGGAGAATTTTTAATAAAATACAAAAACATGAAAAAAACGACCAAATT
TCAACAAAAAACGGTATCGCCTAGCAGAATTTCAACAAGAGATNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCT
TTGTAATAAACCAAACCAATGTATGAGCGATTTATAGAGGCCCATGTGCA
TGCACGGTGGCCTGGAAATCTGTAAAACATTATTATTATTATTATATTAT
GTTAATTTTCCTGATTTATTAAACAATCCTGAACCCATAGACGCCATCGG
ATGGACAATGGAATCCAAGGCGTTGAGTTTAAAGCGTCAAAGCAGTTAGA
AAGGAATCTTAAACCTTATTCTCAAGCAAGAAAAAGTGAAGCCTAAATAT
TTGTGCCACATTTACAGCTAATAGAAGGCGATTGTAATACATTCGATCAA
AAGTACACCCTTACAGTGCATTTCCAGGGTCTCGAAAAACCTTCCCTTAA
GGGCGACACATGCCGTGGGTTGGACCTTATGAATGCCTCCCCCCGTCTGG
GGAGCCTCCTCAACACGTCATAGCTCAGAACCAACTTCACTTTCGGCTAA
TATCCCATTCTTGATCGGTGTTTGAGGTTTGAGATGATGGAGATAAGACA
TGAGAAAATAAATTCATGTTAATAATTTTTCAATAATCCTTCCATTAATC
ATACTGCAGTAAATCGTGCAGTAGTCCAACAACAAGTTTCTTACTTATGC
TATCTCTTTCGTGAGAAGAATAGCCAGCAGCAAGAGTAGCCATACCCTGG
CCTCACTTTCGAATTCAGATCTATCAGAAATGTGCTTTGTGTGTTATAAC
CGTACTCTCAGGTGCCTAATAAACGGCCCTCGGACCTTATTAGAACCCCC
CTCCCCGTTTATTACATTTGAAAATTTTCTCAGCTGTCAAAATAAGAATC
CCTTATTGTACTTTAAAAAGCCAGGTTCTTAGTCTGAAATTACCTAATTT
GGGGTATTTAGAGGTATTATTTACAACCCCCCGTTTATTAGGCACCTGAG
AGTATGCATTATAACAACCCAAATTATTGTATTTTTTTGCTAGTTGCCTG
CCAACAATTCTCTTCAAGCCTTACGAGCTTTTTGATAAAAATATAAATGA
CGGATTAAATGCACCCCCTTTTTTCGTTTTTTAAGCGACATGTTTTTGAA
ATATGGCAATGGGTTTTTAACCTGGTTGGTTACGCGTGAATTCATTTTCC
ACCTTAGAGTTTCAATTCTAGCCATTTCGGGGCTTTGAAATCAATGGTAA
TGACTAAATTAGCAGTTCCCAGGTTATCATATTCTCCTTTGGACATAGAT
AAAGAAAACATTTGGCATATTAACATTTATTGAATGCTAATTAAGAAGGT
TGGATTAAATGATTATTCACGGCCTACCTCATACCACACTCCATTGAAGT
CAATAGGTGTGTTAATCCTTCTCTGTATGAATGAAGCTTAAGTGCAATCA
ATAAGAATTATATGTGCCCCGCAAAGTAATTCTTGAACCCTAAGCATTTC
TATAAGAATAAACTATATAAGAACATAAGGCTTCGAAGGCCAAAATATTC
AGGACAGGTTAAAAACATTTTAAGGCTTTGCGAACTCTAGAACATCGAAT
TTTTTAAAGAAATACTCAAAAATGGTGAAATTAAGAACATGTTAAGAACA
TTTTTAGGTTCAAGACTCAAAAAGTTAGGAACATCATAAGGCTCAAAAAA
TGTTGAATGCTCTTAGAAATGTCGAGCGGGGCAAACGTTTTGTTTTGACC
GGACGCCTGCATTTCGGATGCAAAAGTTAATACCCTAATAGATTTCCATT
ACGGATTAATTGGTCTTGTTGTTTTTATAGTATACTTTAATTAGACTTTT
GTTGTTTTACTTATACTTTAATTAGGGTTTTTGTTGCTTTGAAATATAAA
GTTTATAATTTTTGTTTTTCATTTTTGCTACGTTGTAGTATATATCAGTT
TGAGATTGATTAAGTGTTGTTGTTAGAGTTTTTTTTAATATTTTTTGGTT
TATTCCTATTCCCTGATTCACAATCCTTGGTATATTCCTTGTTGGGAAAT
TTGAATAGAGTCAAAGGTAGGTTGATTTGCGATTAATTTTTTGATAATAT
CCATTGCTAGGCGTCATTAAAAGGTTGCCATGTTAGTGATGCATAAAATT
GGCATAACATTTTTTGTCAGATTGTTTTTTTTTTTATTAACCTGTAATTT
ATGATCACGGCCTCTTTGGTGCTCTGTGATGGCTTTATTTTGTATCTGAG
AAAATATATGGATCTTTCAATTCTGGGTCATTTTGTATTGTTGAGCCATG
GTAACCACATCTTGATAAGAATCTTGAAATCATATATAAAAGGAACTGCA
TAGATATCAGATACTCATAATTTGCTACACCACACTTATAAGTTTTTTTG
CAGTGTCATTTTCGCAGTAGGAGAGAGGCTTTCTTATTTTCTTCAACCTT
GAGGCGAGAATGAAAAAATTAATGATGGTACAGTTGAATTTCTATAATTC
GAACAAGCACGGGGAACTCAAATTTGTTAGAGTTACTTATTTGTTAGAGG
GTTTATAGGTAGGCTTTTCCTAATCCGTGTACCCACTACGTACTCAGTTA
GAGTTGAAGAAATTTTGGAGTTATGAAGTAAAGTTTAATGACGCATTGTT
AACTGAAGGGGCTAGAGAACTTATTCGAGTTAAGGAGAAATTCGACTTGT
AGAGGCTCGAAATATGGAGACTCTACTGTACGTATCTTTAGACAAGCCAG
CAGGTGACAGGTGGCAGAAAACCTAAAGCTATGTTAGTATCTACATCAGT
TCTGATCTTTATATACTTAGACTAGTAAACCACGTCGTTGCAGCTTACGC
TTGCAAAGGGCTCATTACTTGGGCTTTTGACACCACCCTCCCACAGCAAT
TTATCTTTTTATTATCTTTATTCACGCTTTTGTGTGTCTCAGTAAAGCCA
GACGTTTGCTAGTCCATAAAAACTAAGCTTTAGCTCACTGACTCAACAAC
AGTTTTCAAGCAGTTGGTAATAATAAGTAGTCTAAATGCAAAGAAGGGCT
TATTTTTCTGGGACATCTCCAGGTCAGTCTCTTAAGGTTGTCTTGGTAGC
TGATATCCACTAACGAATTTGTGCTCCTTATATAAATTTACTGACTTCGT
CTTTGCAGAGTCTGCAATTCAGACTGTCTAGCTAAACCTGGTCGAAATGC
GATTTCCTAGAATTACACCCCTGTCTCACAGCCCCAGTGGAACTTCTTGC
CACAGTGGGATGAAAATTTATATCAAAATNCGATTTCCTGGAATTACACC
CCTGTCTCACAGCCCAGTGGAACTTCTTGCCACAGTGGGATTTTGAAAAT
TTATATCAAAATTCCAAAGGGGATATAAATTCTATTGTTCCTAGGTAAAA
AACCATTCGGGATAGTTTTGGATTGCAATTTTTCCCATTGTTTTTCAAAT
GGAGATGAGAACAATGCAATTTTCCAATGGGCTGAACTTATAGGGTATTT
TTCCCAACGAGAACAAAACATCTTAGCCAAATTTTCAGTGGTTACGGGTC
TGTGACACAGGGTTGTTTCATTCTCCTTTGAAGAAAATACATGGAATACA
TCCGCATTCATTTAGATGGGTAGGAGTATTTTATAGAGCTGTTTTCATTA
AAGGCGATGAACATTTTTTAGACTGCTGTGTATGCTCAAAGGCAGGGAGG
AAAAAAATGACTTTGAAAAGAAGAAAAACGGTTTTTCCTTTTTGTATTTT
GAGTTTACTCACGAAGATTGCTGCGATTTTTTCCGTTTCCTATGAGAATG
AGATACGAAAACTTCCTTTTTCCATAGTGCTTGTCGGTTATTGGAAATTT
TTTTATATAAGAACGTTTTACGATATTTAAAAGAATTATTTAATAGGATT
TATTGAGATTTCTTAGTGAAGATTTCTAGGAAGCTTACAGAAATAACGTT
TTAATGTGTCCCAACCTCAAACAAACAACATGGAAAATTTACTTGATATG
ATAAAGCTATATTAGTTGTACCTGGTTGTGCTATAGGTCAAAGCCTTTAA
ACTTTGAGAGATTCTTTCCTGGAATGTCTGGTTTAAGTCTTAGTAAAGTA
ATCTTAGCCTGTGTTCTTACAAAAAAGGAAATAATATTGTAAACGAATTG
ATCTTTTTCTTGAAAGAGAGTTTTCATGAGGTGTTGAATGAGAATCAAGT
CTGAGATAGATAAAAATTTGAAGTAATATAAGCCAAAATTTGTTTTCAAG
ACGTATTTTTTCAGTCAAAAGAAGGGGGAATATATAGCAATTGAAGAAAA
AATGACAGTAATTATTTTCATTTTTCCCAGCCTAACACACGACGTCATTT
CGACGTACATCTAACGTCAGATTAACGTCATGGGCGTCAAATGGATGTTG
CTTAAACGTTTTCTGTCTGAAAAATCCATATTTTCATATTTCGAACTAGC
CTCTAAACCATTTACGTCATAAGTACCCACTTTCATTTTTTCATTGTCAA
CGTAATTCTGCGGTATAGGGGCTGGGCTACCTTTATATATATATTTTCTG
TTAGTCTGATCGAGGAAGGGAGAAACGATCTTTTTCTCGAGCAAAATAGA
CAAGAAAATGTTTGGGGTAAGGTTAATCAAAACTAACCTTTTATACATTT
TTTAAAAAGGTGTTTCATTGTGAAAAATATTCTTCGAGGATAAGAAGCAA
AATGAAACAGCCGAATTATCCGGTCGGGTATACTACGAAAAAGGTCTGCT
ATTTTTCGGCTGTATAAAGGTCGTAATCATTCTTGAAATTTTCGGAGAGA
GGGGTTTTTTACTTTTCATGATTTTCTTCTTTATTTTCTTTTTCTAGAGA
CCGTACGGCCTGATGGAGAAAGAATTAGAAGGTAGGTTTTTGTTTCCAAG
TTTTTGTTTTTTGTTTGAGAGGATTTTCATATACGGCTACAATGCTGTTT
GATACTGATTTCTTAATTCGTCGTTTCTCAAAATTCAATTTCGGGTGAAA
ACCGTAATTTCAGCTCTTCCACTTTATGTCATCGGGTTTTTTAATTTGGG
AGGGGTTTATCGGCTTTCAGGCTATATTCTAAATCTTATTGTATCATTTT
AAAACTTTTAGATCATGAGATCCTTAAGTCTTAAGTCTAATGTTAAAACT
CAGAGTTAGAACTCTACTTTCCCACCATCAGTTAAAGCACTTAAAAATCA
CTTGCTTTTTTGAAATTCTGCCAAATATTATGATCTGCATTGTAGATAGA
ATATTTTACATATATATTTTACGTGGATAGTTCAATAATCAAGGACCTTT
TAGCCAGTCTATAACATCATCCACTGCTAGCCGGTTCGGAATATTTATTA
ACTGAACGGAGCATTGGCTAGAGCGGGAAACCGAGAACCCTTTAATTTGT
GGTGCTGAAATCGTAGACAACATGGCAATCTCTTCTTGATTCAAATCCTA
GTCATTACCTTTAAAATTAAACTTGCTAGCCTCCAGGGAAAGGTGTGACC
TAGCTTTGAAACCTTTTTAAAGTGCGCTAAAAGGATCATTGCATACACTA
GATTGATGATTCCAAAAGAACGGTAGCAAAGATTTTCTTTATTATCAAAA
TTCAATACGATAGTAGACAAATTCATTTATTTTCTCTATTTTTAGAGTAC
CGCAAATATTTTTGGCAGCAGGACGTTGACGGAGACGGTCAACTATCAAA
GAATGAATTCAATAACATGTTACGTACAATGGGTTTGAATCTTACTCGTC
AAGAAGTTGAAAATTTATTCGCCAAAACTGACGTTGATAGTATGTATCCC
AGCTGGAACACAACGTTGTTTCAATGTTTATCTAACGTTAACGTCAACGT
TAGATTAACGTTGAAACAACGTTGTGTGCCAGCTATGTATTGATTCCTTT
TTAGGGGGCTTTTTTACACCCCCCTTCTCACAGACCCGGTGGGATTCTAT
CAGCTAGTGGGGTTAAAAATAACGGTCAAAAACTCGATAAGGATTGATAT
TCCCATGTTTTTTATGGCTGGGGATTTAAATTCCATTGTTTTCTAGCCAG
AAAATTCTGTGGGAATGGAAAAAATAGCACAATATTTTACAATTATCGTA
TCTCCGTTCGCAGTTTGTAATAATGAACACTTAATGATTTTACTAGCGAG
CACCTCACTAAAAACCGGGATTTTTCATCATCAAAGTTCCACTTTGCCGA
TTTTCGAAAAATAAAAGCCTTTCAAGTGCTTTGACGCAAATTCGATTATT
TTGATACTGCAGGAGCTTCGAAAGTTATAAGTGACGTCAAAAAATCGAAT
GTTTAGAGCCCGAAAACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCCGAAA
ACCCGGGCTCAAAACATTCGAAAAAGTCGCAAAGTGGAATAGACGTTAAT
TGCGTAAAAAAACGCGGGTGACGTCTAGTATAGGCTAGAAAACCTGGGCT
CAAAACATTCGAAAAAGTCACAAAGTGGAATAGACGTTAGTTGCGTACAA
AAACGCGGGTGACGTCTAGTATAGGCTATGATTGTATATGGTATAAAAAA
AACGGGGAGGATTGGCATGTGTCAGTCTCGTCGCAATCGTGACGGGATCT
TCTAAATAGACACAAGACAAGGACAGGTCGATGACACTACTGCCTTGCCA
AAGATGTTGTCCTCTTCTACTGCCTTGCAATCATATTCTCTCTATAGAAG
ATATACAACTGTTGCTCTCTAAAATAGACTGACGCACCAGTCAGGCTAAC
ATATCATGCGGGAATAGTGAGCGTAGTAGGAAATTCTGTCGATGAGAGGT
GCGCTTCGCACGAAAGTGGACATCGGGCTTATCTGATATTCCGATGGCGC
ATTGGCGGCCGCCCACGCTAAAGCTCTAAAGGAGCGGGCCAAAATTTTCC
CGACCTTCAGAGCTTTAGCGTGTCGGAAGAAAATTTCTCCATCGAGTACC
AGATAAACATCGGGCTTAAGTTAGATCGCTTCCAAATAGTTTTTGGGAAG
ATTTCGTGGGAATTTCCCTACTTTCTCAATTCATACCCACCTATTTTAAC
CCGTTCTCATGCGCAGTTCCTATTTTACCAAAAACCCCACACAGCCCTCT
AACATGGTTTAATTAATAGACTATTTCGCTAGTCTCTAAAGATGTCAACT
TCCAAAAGTGTTAAAGGGACTGAAAAAAATAGTGTTTAATGTACGCCACT
TGTTCTCTCTTATCTACCTGCAGAAAATTACAGGATCAGCTTCCATGAGT
TCGCCGAAGCCTTCATTGCAAAGAAACGGGAACATGTGAGTGGCGATCGG
CTACGACGCGTCTTTCAAGAGGCCGATCGTGACCGTGATGGTTACCTGAC
AACAGATGAGTGTTTGGCCGCTTTAAAACAACTCGGTCACGTAATGGATG
ATAAAGGCATACGACGTGTGATGGGTTTGATGGATAAGAATAATGACGGA
ATGATAACGTTTCAAGGTACCTTAGCATTTGTTTTCTTTTCATGTTACAC
ATTTCTTTTAATAAAAACATCCAAATGTTCTTAACTTTTTGATTTTTAAA
CCAAATATTATTCTGATTTTCAGCATTTTGTGAAGATTTATATTTGATTT
CTACAGTCTGTTTCATTAAGTTTAAAGCCTGCAGGGTTAGAGTAGAATCT
CTAACCTTTCCCAGGCAAAAAAAAAAGTGAAGCCACTTATTTCCCATTCA
GAATGTGCCTGGAACGCGTCGCAATCATGACGACAGATTGTATCTAGTGG
TTCCTTTGTTTTTGAGGACTACATTTTTTGAAATCTAGATCTTAATTTCA
ATCCAGCGTTTGTGTAAAAACCACGCGTGGGCGTTCTGGATTGGAAATAA
ACGACTTCATTTCCTATCCAGGAGTCTTGAGCCTAGCCCCTCGGGCTTAG
AATAAGTCAATGGTTTGTACCTCTAAAGAATCCTGCATTATAACACGCAT
GCGTAATTTGTCGTTCTTTAAACATATGTAGTTAAACTGCGTGATAATCA
AAGAGGAGTAAATTCGTACTTAGGGGTGGACAAACTAACCGGGTCGGGGT
TGGGTTATGGACGGCGAAATATGTCATATTTTGTGAAATATGTTGTTCTT
TTTGTCTATTTTTAGCCAATGTAGGATTCTTTAAATTAAGCCTCTCATAA
ATCTTGTTTTCTTTTGTTTCAGAATTCTGCAAGTTCATGGCTTAGAGGTT
GGAACGTTCGATGGAAGGATTGGATTTTCATAAGCCAAAAGGGATGGCTT
TTTTGTATATAGTTACTTGTAAATGTGGTTAAAATTGTTTCAATAAAAGA
AAGTCTTTAACTTCCAAGCTTCTACTCTGGAACGCGTTTAATGTTTTTTA
ATGACACCCTATTCCTTAGCTCTGGTTTAGTCGGCCCACTTTTAGCCCAC
TTTATGCCAACTCTAGCAATTAGAATAGGCAGGGCTAAAAGTGGGCCGAC
TAAACCAGAGCTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044235XLOC_044235Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071172-exon-scaffold_6-1575043694:212114..212268TCONS_00071172-exon-scaffold_6-1575043694:212114..212268Clytia hemisphaericaexon
TCONS_00071172-exon-scaffold_6-1575043694:203838..203871TCONS_00071172-exon-scaffold_6-1575043694:203838..203871Clytia hemisphaericaexon
TCONS_00071172-exon-scaffold_6-1575043694:202930..203073TCONS_00071172-exon-scaffold_6-1575043694:202930..203073Clytia hemisphaericaexon
TCONS_00071172-exon-scaffold_6-1575043694:200703..200945TCONS_00071172-exon-scaffold_6-1575043694:200703..200945Clytia hemisphaericaexon
TCONS_00071172-exon-scaffold_6-1575043694:199705..199996TCONS_00071172-exon-scaffold_6-1575043694:199705..199996Clytia hemisphaericaexon
TCONS_00071172-exon-scaffold_6-1510915933:212114..212268TCONS_00071172-exon-scaffold_6-1510915933:212114..212268Clytia hemisphaericaexon
TCONS_00071172-exon-scaffold_6-1510915933:203838..203871TCONS_00071172-exon-scaffold_6-1510915933:203838..203871Clytia hemisphaericaexon
TCONS_00071172-exon-scaffold_6-1510915933:202930..203073TCONS_00071172-exon-scaffold_6-1510915933:202930..203073Clytia hemisphaericaexon
TCONS_00071172-exon-scaffold_6-1510915933:200703..200945TCONS_00071172-exon-scaffold_6-1510915933:200703..200945Clytia hemisphaericaexon
TCONS_00071172-exon-scaffold_6-1510915933:199705..199996TCONS_00071172-exon-scaffold_6-1510915933:199705..199996Clytia hemisphaericaexon
TCONS_00071172-exon-scaffold_6-1491911889:212114..212268TCONS_00071172-exon-scaffold_6-1491911889:212114..212268Clytia hemisphaericaexon
TCONS_00071172-exon-scaffold_6-1491911889:203838..203871TCONS_00071172-exon-scaffold_6-1491911889:203838..203871Clytia hemisphaericaexon
TCONS_00071172-exon-scaffold_6-1491911889:202930..203073TCONS_00071172-exon-scaffold_6-1491911889:202930..203073Clytia hemisphaericaexon
TCONS_00071172-exon-scaffold_6-1491911889:200703..200945TCONS_00071172-exon-scaffold_6-1491911889:200703..200945Clytia hemisphaericaexon
TCONS_00071172-exon-scaffold_6-1491911889:199705..199996TCONS_00071172-exon-scaffold_6-1491911889:199705..199996Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:199705..212268 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	1.33894e-09	0	3.01405	2.7641	25.7079	22.0549	13.507	8.06366	16.8852	11.2773	28.0034	38.879	16.9937	21.0035	8.08893	14.4258	50.271	28.5569	14.0845	11.4736	6.54362	8.41393	41.0656	28.2794	2.03227	3.15027	6.61299	11.7579
Blast
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BLAST of TCONS_00071172 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.464e-18
Identity = 40/143 (27.97%), Postives = 77/143 (53.85%), Query Frame = 3 
Query:  168 LMEKELEEYRKYFWQQDVDGDGQLSKNEFNNMLRTMGLNLTRQEVENLFAKTDVDKNYRISFHEFAEAFIAKKREHVSGDRLRRVFQEADRDRDGYLTTDECLAALKQLGHVMDDKGIRRVMGLMDKNNDGMITFQEFCKFMA 596
            L E+++ E+++ F   D DGDG ++  E   ++R++G N T  E++++  + D D N  I F EF      K ++  S + +R  F+  D+D +GY++  E    +  LG  + D+ +  ++   D + DG + ++EF + M 
Sbjct:    5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
The following BLAST results are available for this feature:
BLAST of TCONS_00071172 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM34.464e-1827.97Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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