TCONS_00071160 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071160
Unique NameTCONS_00071160
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2073

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071160 ID=TCONS_00071160|Name=TCONS_00071160|organism=Clytia hemisphaerica|type=transcript|length=2073bp
TTGAGATCTGATGTTGAGAAGATATTGAGTCTAGCACCAAATGAAACCAA
GTTTTCCAACTCAAGTTTGATATGCCCTAAGGACAAGCAAAACGTACCAC
TAGCAACAACACTACTTTTCCAGTTTGTAAAAGCAGTTCGTGATGTTGAC
ACACTGAAAACAATCAACCTTCGAGTAGCTGATGTTTCTGAGGAACTTCA
TTTGCTGGGATTCATCATCGAAGCTGTTTTGGCATGTTATGCTACTCCAG
ACACAACAATTAAAAGTCAGCTTGAAAAGATTTCACTTGCTGCACATATC
TTGTTAATCCTGAAAAGAGAGTTAAAATCATTCCTCAACAACCAATTATA
CCACGACCTGCAAGCAACATTTTCAGATGCCTTCTTTTGTGCTACCAAAT
GGAAATATCACCATCCTGACGTTCCCTTTTTTATCATGCTGTGTAGCAAT
GATACAATTGAACGTTTTTTCGGAAACCTTCGACTGAAATACAAACAATC
AGTTGTTGATAATTTGGAGTTGATCTATGCAACCAGATCAATTCAATTAT
GCACTGACATGATGTACAAGCACCCAAATTGGTTTGAAGAAAGCCAAAAG
ATCATGAAAAGGTTGTGTCTTGATTATTGCAGCCCTGGAAAATGGGACCT
TGAGAACTTAGTTCTTAAAGATGTTCCAATTGTAGCTGTCTGGAATCAAG
GAAGAGCGTTGGCAGAATACAAGTTTAATCAAATCCAGAAGTATCAAGGA
GAAGTGTGTGATTTCAATATGATTGCTTCGTTGGGTTACACCCTTCTTTG
TCCAAATGGAATTAAAATTGGGTTGACAGACACAGACACTTCTGAAGATG
ACAACATACATGTTAATGTTGGTGAGGGTAATACCATATTGGACGACACT
GATATAGAAGATCGCCCTGCAACATCACTCATTGACATGATACCAGAAGA
AACGACTCAAAAGCATGATGTTCAAACTGAGATTGATGGCTCTCGAGTAT
ACAAGGCAACGATCGTAAAGAGCCTGTTCTCATCAAACCCTCTCTCAAAG
GACAGACTCCGTAAAGTCAGGGGGATGACTAAGTTTACTGAAGATGGCCA
AGAAGCAAGTGAAGCAATTGAGACATCAATAATGCCTGGGGATCCTATCC
TTTTCAATGTCAAGGGTACCTTGAAGATTGTGAAGATATCTGTTTTGAAG
AAGGCTACTCGCAAAGTGAAAATGGTATCTTGTGGTGATATTAGTAATGA
AAATGTGTATGTAAAAGGTGCGGAGATGGGATTGGATAAAGATGCAGACT
GCTACATCTGGAATGGGTCACTTGGTGAGATGATTGAAACCACTGGACCA
TATTGCTATGCCATCCAACCTGATTTGAAAACAATTAAAGGAAAACTGAT
GTTTACTTTTGATAAGCAACTGATACTAGACTTGAATGTTGGTTTGACAA
TCCAAAACCCAAATCCAGGTTCATCAAGCAGCACAAGTAGCCATTCAAAC
CAGAATTCAAGTAGTGCCACTGGTGCCAGTGAAAATACCAACTCGTCAGT
AAAGAAAGCCTCTTCAGAGAAAAAAGGTGCTCTCAAACATGTCGTTGAAT
GCTGCTTATGTAAAGAAAGGATTCTGCTAAGCAACATGAGAAAGCACATA
GGCATCCACATTACCAAGAGCCACATCTCTGGTTGCAACATATGTGGATT
CTGTGGGAGAACTGTATGTAACACAAACCTGACAAATTCATCAAAAAGAG
GAAACGAACAATACAATCAGATGACAACAAACTGTAAATATAACTCCTTC
ATCCAGAGGAAACCCGTTCATTCCCAACGAAACCCGTGCTCAAATCATGT
TGTGCCCTGCCCTGTCTGCAAAGTGGCCATTTGGACTTATAATGCACGTG
CCCATTATGAAGGAGTACATCCAACCCATGGTTATAATGACTCGGACTTT
GTTTCACTTCAAGAACggcaaaaaatggcaaaagcAGCAAAAATCAAAGC
TACAAACActtaaaattttgtgaaaactaAAAGGACTTAGACCTGCTTAT
ACCAGCTTTTTCTTATATATCCG
Run BLAST on NCBI

protein sequence of TCONS_00071160-protein

>TCONS_00071160-protein ID=TCONS_00071160-protein|Name=TCONS_00071160-protein|organism=Clytia hemisphaerica|type=polypeptide|length=670bp
LRSDVEKILSLAPNETKFSNSSLICPKDKQNVPLATTLLFQFVKAVRDVD
TLKTINLRVADVSEELHLLGFIIEAVLACYATPDTTIKSQLEKISLAAHI
LLILKRELKSFLNNQLYHDLQATFSDAFFCATKWKYHHPDVPFFIMLCSN
DTIERFFGNLRLKYKQSVVDNLELIYATRSIQLCTDMMYKHPNWFEESQK
IMKRLCLDYCSPGKWDLENLVLKDVPIVAVWNQGRALAEYKFNQIQKYQG
EVCDFNMIASLGYTLLCPNGIKIGLTDTDTSEDDNIHVNVGEGNTILDDT
DIEDRPATSLIDMIPEETTQKHDVQTEIDGSRVYKATIVKSLFSSNPLSK
DRLRKVRGMTKFTEDGQEASEAIETSIMPGDPILFNVKGTLKIVKISVLK
KATRKVKMVSCGDISNENVYVKGAEMGLDKDADCYIWNGSLGEMIETTGP
YCYAIQPDLKTIKGKLMFTFDKQLILDLNVGLTIQNPNPGSSSSTSSHSN
QNSSSATGASENTNSSVKKASSEKKGALKHVVECCLCKERILLSNMRKHI
GIHITKSHISGCNICGFCGRTVCNTNLTNSSKRGNEQYNQMTTNCKYNSF
IQRKPVHSQRNPCSNHVVPCPVCKVAIWTYNARAHYEGVHPTHGYNDSDF
VSLQERQKMAKAAKIKATNT
Run BLAST on NCBI

transcript from alignment at scaffold_6:157014..159693-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071160 ID=TCONS_00071160|Name=TCONS_00071160|organism=Clytia hemisphaerica|type=transcript|length=2680bp|location=Sequence derived from alignment at scaffold_6:157014..159693- (Clytia hemisphaerica)
TTGAGATCTGATGTTGAGAAGATATTGAGTCTAGCACCAAATGAAACCAA GTTTTCCAACTCAAGTTTGATATGCCCTAAGGACAAGCAAAACGTACCAC TAGCAACAACACTACTTTTCCAGTTTGTAAAAGCAGTTCGTGATGTTGAC ACACTGAAAACAATCAACCTTCGAGTAGCTGATGTTTCTGAGGAACTTCA TTTGCTGGGATTCATCATCGAAGCTGTTTTGGCATGTTATGCTACTCCAG ACACAACAATTAAAAGTCAGCTTGAAAAGATTTCACTTGCTGCACATATC TTGTTAATCCTGAAAAGAGAGTTAAAATCATTCCTCAACAACCAATTATA CCACGACCTGCAAGCAACATTTTCAGATGCCTTCTTTTGTGCTACCAAAT GGAAATATCACCATCCTGACGTTCCCTTTTTTATCATGCTGTGTAGCAAT GATACAATTGAACGTTTTTTCGGAAACCTTCGACTGAAATACAAACAATC AGTTGTTGATAATTTGGAGTTGATCTATGCAACCAGATCAATTCAATTAT GCACTGACATGATGTACAAGCACCCAAATTGGTTTGAAGAAAGCCAAAAG ATCATGAAAAGGTTGTGTCTTGATTATTGCAGCCCTGGAAAATGGGACCT TGAGAACTTAGTTCTTAAAGATGTTCCAATTGTAGCTGTCTGGAATCAAG GAAGAGCGTTGGCAGAATACAAGTTTAATCAAATCCAGAAGTATCAAGGA GAAGTGTGTGATTTCAATATGATTGCTTCGTTGGGTTACACCCTTCTTTG TCCAAATGGAATTAAAATTGGGTTGACAGACACAGACACTTCTGAAGATG ACAACATACATGTTAATGTTGGTGAGGGTAATACCATATTGGACGACACT GATATAGAAGATCGCCCTGCAACATCACTCATTGACATGATACCAGAAGA AACGACTCAAAAGCATGATGTTCAAACTGAGGTTTGTACTAATCCAGGTT GAGATAAATACAGACTCAAAATAGGCTACATAACACTTTGATTCTGTTTG ATTCTGTTTTTCTTTCCAACCAGTTCAGCTCAATGTGATTACTCGAGTAC CCTGAAATACCTGGAATACTGTAGATTATATATTTACTCTGATTTACTCA GAATTTTATAGCCAATTTGTTTTGTTTCTCAGATTGATGGCTCTCGAGTA TACAAGGCAACGATCGTAAAGAGCCTGTTCTCATCAAACCCTCTCTCAAA GGACAGACTCCGTAAAGTCAGGGGGATGACTAAGTTTACTGAAGATGGCC AAGAAGCAAGTGAAGCAATTGAGACATCAATAATGCCTGGGGATCCTATC CTTTTCAATGTCAAGGGTACCTTGAAGATTGTGAAGATATCTGTTTTGAA GAAGGCTACTCGCAAAGTGAAAATGGTATCTTGTGGTGATATTAGTAATG AAAATGTGTATGTAAAAGGTGCGGAGATGGGATTGGATAAAGATGCAGAC TGCTACATCTGGAATGGGTCACTTGGTGAGATGATTGAAACCACTGGACC ATATTGCTATGCCATCCAACCTGATTTGAAAACAATTAAAGGAAAACTGA TGTTTACTTTTGATAAGCAACTGATACTAGACTTGAATGTTGGTTTGACA ATCCAAAACCCAAATCCAGGTATTACACATTACATCACTATCATATTGGT GGATATTTAGGATTTTAAAAATCTTCTTCTGTTCAAATGAAGTCAACTAA TGAATGAATGAGCGATTAAAAGTTTTCTTCTTAGCTGTTTGTGTTGAGCC TTAAACTCCATCTGAGCTTATGTGCCATCATCACAAAAACATTAGCATAA ACCTTTTAAATCTCTACTAAATTTAGGTTCATCAAGCAGCACAAGTAGCC ATTCAAACCAGAATTCAAGTAGTGCCACTGGTGCCAGTGAAAATACCAAC TCGTCAGTAAAGAAAGCCTCTTCAGAGAAAAAAGGTGCTCTCAAACATGT CGTTGAATGCTGCTTATGTAAAGAAAGGATTCTGCTAAGCAACATGAGAA AGCACATAGGCATCCACATTACCAAGAGCCACATCTCTGGTTGCAACATA TGTGGATTCTGTGGGAGAACTGTATGTAACACAAACCTGACAAATTCATC AAAAAGAGGAAACGGTAAAAATATCTATTGGTATTTATTGATCATTTTTA TATCTGTTCTAACCATTAACTTAATTCTCGTGGTCAGGTCTGGTTAGATT CTTAGGTATTTTTGAGGTAATATCTCTGAGTTTAATGTAGTGCTAAAAAA TACTTTGACCTGCTTTAACAGGGCTTTGACAGATCTTTGATGTTAATTAC TCATTTGTTTTAGAACAATACAATCAGATGACAACAAACTGTAAATATAA CTCCTTCATCCAGAGGAAACCCGTTCATTCCCAACGAAACCCGTGCTCAA ATCATGTTGTGCCCTGCCCTGTCTGCAAAGTGGCCATTTGGACTTATAAT GCACGTGCCCATTATGAAGGAGTACATCCAACCCATGGTTATAATGACTC GGACTTTGTTTCACTTCAAGAACGGCAAAAAATGGCAAAAGCAGCAAAAA TCAAAGCTACAAACACTTAAAATTTTGTGAAAACTAAAAGGACTTAGACC TGCTTATACCAGCTTTTTCTTATATATCCG

Coding sequence (CDS) from alignment at scaffold_6:157014..159693-

>TCONS_00071160 ID=TCONS_00071160|Name=TCONS_00071160|organism=Clytia hemisphaerica|type=CDS|length=8052bp|location=Sequence derived from alignment at scaffold_6:157014..159693- (Clytia hemisphaerica)
AACAATACAATCAGATGACAACAAACTGTAAATATAACTCCTTCATCCAG
AGGAAACCCGTTCATTCCCAACGAAACCCGTGCTCAAATCATGTTGTGCC
CTGCCCTGTCTGCAAAGTGGCCATTTGGACTTATAATGCACGTGCCCATT
ATGAAGGAGTACATCCAACCCATGGTTATAATGACTCGGACTTTGTTTCA
CTTCAAGAACGGCAAAAAATGGCAAAAGCAGCAAAAATCAAAGCTACAAA
CACTTAAGTTCATCAAGCAGCACAAGTAGCCATTCAAACCAGAATTCAAG
TAGTGCCACTGGTGCCAGTGAAAATACCAACTCGTCAGTAAAGAAAGCCT
CTTCAGAGAAAAAAGGTGCTCTCAAACATGTCGTTGAATGCTGCTTATGT
AAAGAAAGGATTCTGCTAAGCAACATGAGAAAGCACATAGGCATCCACAT
TACCAAGAGCCACATCTCTGGTTGCAACATATGTGGATTCTGTGGGAGAA
CTGTATGTAACACAAACCTGACAAATTCATCAAAAAGAGGAAACGATTGA
TGGCTCTCGAGTATACAAGGCAACGATCGTAAAGAGCCTGTTCTCATCAA
ACCCTCTCTCAAAGGACAGACTCCGTAAAGTCAGGGGGATGACTAAGTTT
ACTGAAGATGGCCAAGAAGCAAGTGAAGCAATTGAGACATCAATAATGCC
TGGGGATCCTATCCTTTTCAATGTCAAGGGTACCTTGAAGATTGTGAAGA
TATCTGTTTTGAAGAAGGCTACTCGCAAAGTGAAAATGGTATCTTGTGGT
GATATTAGTAATGAAAATGTGTATGTAAAAGGTGCGGAGATGGGATTGGA
TAAAGATGCAGACTGCTACATCTGGAATGGGTCACTTGGTGAGATGATTG
AAACCACTGGACCATATTGCTATGCCATCCAACCTGATTTGAAAACAATT
AAAGGAAAACTGATGTTTACTTTTGATAAGCAACTGATACTAGACTTGAA
TGTTGGTTTGACAATCCAAAACCCAAATCCAGTTGAGATCTGATGTTGAG
AAGATATTGAGTCTAGCACCAAATGAAACCAAGTTTTCCAACTCAAGTTT
GATATGCCCTAAGGACAAGCAAAACGTACCACTAGCAACAACACTACTTT
TCCAGTTTGTAAAAGCAGTTCGTGATGTTGACACACTGAAAACAATCAAC
CTTCGAGTAGCTGATGTTTCTGAGGAACTTCATTTGCTGGGATTCATCAT
CGAAGCTGTTTTGGCATGTTATGCTACTCCAGACACAACAATTAAAAGTC
AGCTTGAAAAGATTTCACTTGCTGCACATATCTTGTTAATCCTGAAAAGA
GAGTTAAAATCATTCCTCAACAACCAATTATACCACGACCTGCAAGCAAC
ATTTTCAGATGCCTTCTTTTGTGCTACCAAATGGAAATATCACCATCCTG
ACGTTCCCTTTTTTATCATGCTGTGTAGCAATGATACAATTGAACGTTTT
TTCGGAAACCTTCGACTGAAATACAAACAATCAGTTGTTGATAATTTGGA
GTTGATCTATGCAACCAGATCAATTCAATTATGCACTGACATGATGTACA
AGCACCCAAATTGGTTTGAAGAAAGCCAAAAGATCATGAAAAGGTTGTGT
CTTGATTATTGCAGCCCTGGAAAATGGGACCTTGAGAACTTAGTTCTTAA
AGATGTTCCAATTGTAGCTGTCTGGAATCAAGGAAGAGCGTTGGCAGAAT
ACAAGTTTAATCAAATCCAGAAGTATCAAGGAGAAGTGTGTGATTTCAAT
ATGATTGCTTCGTTGGGTTACACCCTTCTTTGTCCAAATGGAATTAAAAT
TGGGTTGACAGACACAGACACTTCTGAAGATGACAACATACATGTTAATG
TTGGTGAGGGTAATACCATATTGGACGACACTGATATAGAAGATCGCCCT
GCAACATCACTCATTGACATGATACCAGAAGAAACGACTCAAAAGCATGA
TGTTCAAACTGAGAACAATACAATCAGATGACAACAAACTGTAAATATAA
CTCCTTCATCCAGAGGAAACCCGTTCATTCCCAACGAAACCCGTGCTCAA
ATCATGTTGTGCCCTGCCCTGTCTGCAAAGTGGCCATTTGGACTTATAAT
GCACGTGCCCATTATGAAGGAGTACATCCAACCCATGGTTATAATGACTC
GGACTTTGTTTCACTTCAAGAACGGCAAAAAATGGCAAAAGCAGCAAAAA
TCAAAGCTACAAACACTTAAGTTCATCAAGCAGCACAAGTAGCCATTCAA
ACCAGAATTCAAGTAGTGCCACTGGTGCCAGTGAAAATACCAACTCGTCA
GTAAAGAAAGCCTCTTCAGAGAAAAAAGGTGCTCTCAAACATGTCGTTGA
ATGCTGCTTATGTAAAGAAAGGATTCTGCTAAGCAACATGAGAAAGCACA
TAGGCATCCACATTACCAAGAGCCACATCTCTGGTTGCAACATATGTGGA
TTCTGTGGGAGAACTGTATGTAACACAAACCTGACAAATTCATCAAAAAG
AGGAAACGATTGATGGCTCTCGAGTATACAAGGCAACGATCGTAAAGAGC
CTGTTCTCATCAAACCCTCTCTCAAAGGACAGACTCCGTAAAGTCAGGGG
GATGACTAAGTTTACTGAAGATGGCCAAGAAGCAAGTGAAGCAATTGAGA
CATCAATAATGCCTGGGGATCCTATCCTTTTCAATGTCAAGGGTACCTTG
AAGATTGTGAAGATATCTGTTTTGAAGAAGGCTACTCGCAAAGTGAAAAT
GGTATCTTGTGGTGATATTAGTAATGAAAATGTGTATGTAAAAGGTGCGG
AGATGGGATTGGATAAAGATGCAGACTGCTACATCTGGAATGGGTCACTT
GGTGAGATGATTGAAACCACTGGACCATATTGCTATGCCATCCAACCTGA
TTTGAAAACAATTAAAGGAAAACTGATGTTTACTTTTGATAAGCAACTGA
TACTAGACTTGAATGTTGGTTTGACAATCCAAAACCCAAATCCAGTTGAG
ATCTGATGTTGAGAAGATATTGAGTCTAGCACCAAATGAAACCAAGTTTT
CCAACTCAAGTTTGATATGCCCTAAGGACAAGCAAAACGTACCACTAGCA
ACAACACTACTTTTCCAGTTTGTAAAAGCAGTTCGTGATGTTGACACACT
GAAAACAATCAACCTTCGAGTAGCTGATGTTTCTGAGGAACTTCATTTGC
TGGGATTCATCATCGAAGCTGTTTTGGCATGTTATGCTACTCCAGACACA
ACAATTAAAAGTCAGCTTGAAAAGATTTCACTTGCTGCACATATCTTGTT
AATCCTGAAAAGAGAGTTAAAATCATTCCTCAACAACCAATTATACCACG
ACCTGCAAGCAACATTTTCAGATGCCTTCTTTTGTGCTACCAAATGGAAA
TATCACCATCCTGACGTTCCCTTTTTTATCATGCTGTGTAGCAATGATAC
AATTGAACGTTTTTTCGGAAACCTTCGACTGAAATACAAACAATCAGTTG
TTGATAATTTGGAGTTGATCTATGCAACCAGATCAATTCAATTATGCACT
GACATGATGTACAAGCACCCAAATTGGTTTGAAGAAAGCCAAAAGATCAT
GAAAAGGTTGTGTCTTGATTATTGCAGCCCTGGAAAATGGGACCTTGAGA
ACTTAGTTCTTAAAGATGTTCCAATTGTAGCTGTCTGGAATCAAGGAAGA
GCGTTGGCAGAATACAAGTTTAATCAAATCCAGAAGTATCAAGGAGAAGT
GTGTGATTTCAATATGATTGCTTCGTTGGGTTACACCCTTCTTTGTCCAA
ATGGAATTAAAATTGGGTTGACAGACACAGACACTTCTGAAGATGACAAC
ATACATGTTAATGTTGGTGAGGGTAATACCATATTGGACGACACTGATAT
AGAAGATCGCCCTGCAACATCACTCATTGACATGATACCAGAAGAAACGA
CTCAAAAGCATGATGTTCAAACTGAGAACAATACAATCAGATGACAACAA
ACTGTAAATATAACTCCTTCATCCAGAGGAAACCCGTTCATTCCCAACGA
AACCCGTGCTCAAATCATGTTGTGCCCTGCCCTGTCTGCAAAGTGGCCAT
TTGGACTTATAATGCACGTGCCCATTATGAAGGAGTACATCCAACCCATG
GTTATAATGACTCGGACTTTGTTTCACTTCAAGAACGGCAAAAAATGGCA
AAAGCAGCAAAAATCAAAGCTACAAACACTTAAGTTCATCAAGCAGCACA
AGTAGCCATTCAAACCAGAATTCAAGTAGTGCCACTGGTGCCAGTGAAAA
TACCAACTCGTCAGTAAAGAAAGCCTCTTCAGAGAAAAAAGGTGCTCTCA
AACATGTCGTTGAATGCTGCTTATGTAAAGAAAGGATTCTGCTAAGCAAC
ATGAGAAAGCACATAGGCATCCACATTACCAAGAGCCACATCTCTGGTTG
CAACATATGTGGATTCTGTGGGAGAACTGTATGTAACACAAACCTGACAA
ATTCATCAAAAAGAGGAAACGATTGATGGCTCTCGAGTATACAAGGCAAC
GATCGTAAAGAGCCTGTTCTCATCAAACCCTCTCTCAAAGGACAGACTCC
GTAAAGTCAGGGGGATGACTAAGTTTACTGAAGATGGCCAAGAAGCAAGT
GAAGCAATTGAGACATCAATAATGCCTGGGGATCCTATCCTTTTCAATGT
CAAGGGTACCTTGAAGATTGTGAAGATATCTGTTTTGAAGAAGGCTACTC
GCAAAGTGAAAATGGTATCTTGTGGTGATATTAGTAATGAAAATGTGTAT
GTAAAAGGTGCGGAGATGGGATTGGATAAAGATGCAGACTGCTACATCTG
GAATGGGTCACTTGGTGAGATGATTGAAACCACTGGACCATATTGCTATG
CCATCCAACCTGATTTGAAAACAATTAAAGGAAAACTGATGTTTACTTTT
GATAAGCAACTGATACTAGACTTGAATGTTGGTTTGACAATCCAAAACCC
AAATCCAGTTGAGATCTGATGTTGAGAAGATATTGAGTCTAGCACCAAAT
GAAACCAAGTTTTCCAACTCAAGTTTGATATGCCCTAAGGACAAGCAAAA
CGTACCACTAGCAACAACACTACTTTTCCAGTTTGTAAAAGCAGTTCGTG
ATGTTGACACACTGAAAACAATCAACCTTCGAGTAGCTGATGTTTCTGAG
GAACTTCATTTGCTGGGATTCATCATCGAAGCTGTTTTGGCATGTTATGC
TACTCCAGACACAACAATTAAAAGTCAGCTTGAAAAGATTTCACTTGCTG
CACATATCTTGTTAATCCTGAAAAGAGAGTTAAAATCATTCCTCAACAAC
CAATTATACCACGACCTGCAAGCAACATTTTCAGATGCCTTCTTTTGTGC
TACCAAATGGAAATATCACCATCCTGACGTTCCCTTTTTTATCATGCTGT
GTAGCAATGATACAATTGAACGTTTTTTCGGAAACCTTCGACTGAAATAC
AAACAATCAGTTGTTGATAATTTGGAGTTGATCTATGCAACCAGATCAAT
TCAATTATGCACTGACATGATGTACAAGCACCCAAATTGGTTTGAAGAAA
GCCAAAAGATCATGAAAAGGTTGTGTCTTGATTATTGCAGCCCTGGAAAA
TGGGACCTTGAGAACTTAGTTCTTAAAGATGTTCCAATTGTAGCTGTCTG
GAATCAAGGAAGAGCGTTGGCAGAATACAAGTTTAATCAAATCCAGAAGT
ATCAAGGAGAAGTGTGTGATTTCAATATGATTGCTTCGTTGGGTTACACC
CTTCTTTGTCCAAATGGAATTAAAATTGGGTTGACAGACACAGACACTTC
TGAAGATGACAACATACATGTTAATGTTGGTGAGGGTAATACCATATTGG
ACGACACTGATATAGAAGATCGCCCTGCAACATCACTCATTGACATGATA
CCAGAAGAAACGACTCAAAAGCATGATGTTCAAACTGAGAACAATACAAT
CAGATGACAACAAACTGTAAATATAACTCCTTCATCCAGAGGAAACCCGT
TCATTCCCAACGAAACCCGTGCTCAAATCATGTTGTGCCCTGCCCTGTCT
GCAAAGTGGCCATTTGGACTTATAATGCACGTGCCCATTATGAAGGAGTA
CATCCAACCCATGGTTATAATGACTCGGACTTTGTTTCACTTCAAGAACG
GCAAAAAATGGCAAAAGCAGCAAAAATCAAAGCTACAAACACTTAAGTTC
ATCAAGCAGCACAAGTAGCCATTCAAACCAGAATTCAAGTAGTGCCACTG
GTGCCAGTGAAAATACCAACTCGTCAGTAAAGAAAGCCTCTTCAGAGAAA
AAAGGTGCTCTCAAACATGTCGTTGAATGCTGCTTATGTAAAGAAAGGAT
TCTGCTAAGCAACATGAGAAAGCACATAGGCATCCACATTACCAAGAGCC
ACATCTCTGGTTGCAACATATGTGGATTCTGTGGGAGAACTGTATGTAAC
ACAAACCTGACAAATTCATCAAAAAGAGGAAACGATTGATGGCTCTCGAG
TATACAAGGCAACGATCGTAAAGAGCCTGTTCTCATCAAACCCTCTCTCA
AAGGACAGACTCCGTAAAGTCAGGGGGATGACTAAGTTTACTGAAGATGG
CCAAGAAGCAAGTGAAGCAATTGAGACATCAATAATGCCTGGGGATCCTA
TCCTTTTCAATGTCAAGGGTACCTTGAAGATTGTGAAGATATCTGTTTTG
AAGAAGGCTACTCGCAAAGTGAAAATGGTATCTTGTGGTGATATTAGTAA
TGAAAATGTGTATGTAAAAGGTGCGGAGATGGGATTGGATAAAGATGCAG
ACTGCTACATCTGGAATGGGTCACTTGGTGAGATGATTGAAACCACTGGA
CCATATTGCTATGCCATCCAACCTGATTTGAAAACAATTAAAGGAAAACT
GATGTTTACTTTTGATAAGCAACTGATACTAGACTTGAATGTTGGTTTGA
CAATCCAAAACCCAAATCCAGTTGAGATCTGATGTTGAGAAGATATTGAG
TCTAGCACCAAATGAAACCAAGTTTTCCAACTCAAGTTTGATATGCCCTA
AGGACAAGCAAAACGTACCACTAGCAACAACACTACTTTTCCAGTTTGTA
AAAGCAGTTCGTGATGTTGACACACTGAAAACAATCAACCTTCGAGTAGC
TGATGTTTCTGAGGAACTTCATTTGCTGGGATTCATCATCGAAGCTGTTT
TGGCATGTTATGCTACTCCAGACACAACAATTAAAAGTCAGCTTGAAAAG
ATTTCACTTGCTGCACATATCTTGTTAATCCTGAAAAGAGAGTTAAAATC
ATTCCTCAACAACCAATTATACCACGACCTGCAAGCAACATTTTCAGATG
CCTTCTTTTGTGCTACCAAATGGAAATATCACCATCCTGACGTTCCCTTT
TTTATCATGCTGTGTAGCAATGATACAATTGAACGTTTTTTCGGAAACCT
TCGACTGAAATACAAACAATCAGTTGTTGATAATTTGGAGTTGATCTATG
CAACCAGATCAATTCAATTATGCACTGACATGATGTACAAGCACCCAAAT
TGGTTTGAAGAAAGCCAAAAGATCATGAAAAGGTTGTGTCTTGATTATTG
CAGCCCTGGAAAATGGGACCTTGAGAACTTAGTTCTTAAAGATGTTCCAA
TTGTAGCTGTCTGGAATCAAGGAAGAGCGTTGGCAGAATACAAGTTTAAT
CAAATCCAGAAGTATCAAGGAGAAGTGTGTGATTTCAATATGATTGCTTC
GTTGGGTTACACCCTTCTTTGTCCAAATGGAATTAAAATTGGGTTGACAG
ACACAGACACTTCTGAAGATGACAACATACATGTTAATGTTGGTGAGGGT
AATACCATATTGGACGACACTGATATAGAAGATCGCCCTGCAACATCACT
CATTGACATGATACCAGAAGAAACGACTCAAAAGCATGATGTTCAAACTG
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044230XLOC_044230Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071160-exon-scaffold_6-1575043694:158713..159693TCONS_00071160-exon-scaffold_6-1575043694:158713..159693Clytia hemisphaericaexon
TCONS_00071160-exon-scaffold_6-1575043694:158025..158511TCONS_00071160-exon-scaffold_6-1575043694:158025..158511Clytia hemisphaericaexon
TCONS_00071160-exon-scaffold_6-1575043694:157530..157817TCONS_00071160-exon-scaffold_6-1575043694:157530..157817Clytia hemisphaericaexon
TCONS_00071160-exon-scaffold_6-1575043694:157014..157330TCONS_00071160-exon-scaffold_6-1575043694:157014..157330Clytia hemisphaericaexon
TCONS_00071160-exon-scaffold_6-1510915933:158713..159693TCONS_00071160-exon-scaffold_6-1510915933:158713..159693Clytia hemisphaericaexon
TCONS_00071160-exon-scaffold_6-1510915933:158025..158511TCONS_00071160-exon-scaffold_6-1510915933:158025..158511Clytia hemisphaericaexon
TCONS_00071160-exon-scaffold_6-1510915933:157530..157817TCONS_00071160-exon-scaffold_6-1510915933:157530..157817Clytia hemisphaericaexon
TCONS_00071160-exon-scaffold_6-1510915933:157014..157330TCONS_00071160-exon-scaffold_6-1510915933:157014..157330Clytia hemisphaericaexon
TCONS_00071160-exon-scaffold_6-1491911889:158713..159693TCONS_00071160-exon-scaffold_6-1491911889:158713..159693Clytia hemisphaericaexon
TCONS_00071160-exon-scaffold_6-1491911889:158025..158511TCONS_00071160-exon-scaffold_6-1491911889:158025..158511Clytia hemisphaericaexon
TCONS_00071160-exon-scaffold_6-1491911889:157530..157817TCONS_00071160-exon-scaffold_6-1491911889:157530..157817Clytia hemisphaericaexon
TCONS_00071160-exon-scaffold_6-1491911889:157014..157330TCONS_00071160-exon-scaffold_6-1491911889:157014..157330Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071160-proteinTCONS_00071160-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:157014..159693 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0190331 0 0.0646508 0 1.82237 1.58204 0.929863 1.67233 0.529282 1.17214 0.462795 0.887317 0.481017 0.538978 0 0.0115982 0 0 0 0 0 0 0 0 0.429135 0.838937 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071160 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top