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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071137 ID=TCONS_00071137|Name=TCONS_00071137|organism=Clytia hemisphaerica|type=transcript|length=1460bp
ATGAGCAAACGCGGGACTCGGCCCAGGACTTTTTACCCGCGTTTTAAACG
CGTTTACGGCAATGTTTATTCTttacactttcattttcaaaatctgttgA
ACATGGATTTTGGCTTGTGACGATTACCTCGCATAACATCTGTGAGCCCA
TGATGCGTTTGCCACTAGTTTTATCGACTATCGTTTAATTATTCAAAACT
GGTTAGTGACAAACGCCACCACTGAAGCATTTTTTTGGATTCTGAAGTAC
CAGAAGTATTTTGTGCAGAAAAAAGAAGTTCTGCAGTACTAAAATATAAA
GTGAAATGTCCCCCACTTTCAAATGTACCGCTAGTAGCTTTAATAtgagc
aaaaaagaaaaagtggtTGAANGGAtatttagatacatagatacatagat
acatggatgcgtagatatgtagatacatagatacatagatacatagatac
atggatgcgtagatatgtagatagatagatacatagatatgtggatatgt
agatacatagatacatggatgcgtagatatgtagatatatagatacgtag
atacgtagatatatagatacatggatatgtagatatatagatacatagat
acatagatacatggatgcgtagatatgtagatacataaNAGATTGAAAAG
TTAGAATAATTATGTTTGGTCTTCGATGAGTCTTGTGGAAaagggacttt
aaatttcatgtgCTTCCCTTTAAACTTGATGACTTCTAGTGTCAATCAAA
CAACAATAATGCAAACACAATATTGATTCTTTGNTTGATGTCTTCTAGTG
TCAATCAAACAACAATAATGCAAACACAATATTGATTTTTTAACAACAAA
AGCCTGGGGTTTTCAGTTGAAGCAAAACAATTGCTGGCCTCTCTCTTAAA
AACAATACAACATTTTTCCAACAATGATTTTATTATTCCCTAGTCAGTGG
atttcaaatttcatatttctagAATTTTCTCCACACTTGGCTGTAAAGTT
CAGATGGAAAACAGGGGGTAAAGAACAGACTTTGAAATCTTGTTTTGGTG
GATGAATACTTGTATGATTCTGGAAAAATGGCAGGGGAAAAAGTATCTAT
GTTACAGAatgaaaaaagtaaagtaaacTTAGCTTTTTCAGGTAAAGAAG
AATCGTAGAATCgttctttttctttgaatctTCTTTCCCAAATCTCTCCA
AATCTCGAACAGTCTCGAATTCTTCTTTTGTGACCAACATCATTTCCAAT
GTTTCCATTCACTTTTTAGCGCGCTTTATTCAATTTAGCCTCTGTAATTT
ACctttaagttaaaaaaaatgCGCGAGGCtaacaaatgtaaacaaacatg
gtAGCCACTCACTGCGCTGTTGTTGCATGGAAAGAGTTACATCGGATCAC
CCAAAGTAccctcatgttttttttttattttcttatctctgatcctgtct
ctctcttttc Run BLAST on NCBI transcript from alignment at scaffold_6:21468..22927+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071137 ID=TCONS_00071137|Name=TCONS_00071137|organism=Clytia hemisphaerica|type=transcript|length=1460bp|location=Sequence derived from alignment at scaffold_6:21468..22927+ (Clytia hemisphaerica)
ATGAGCAAACGCGGGACTCGGCCCAGGACTTTTTACCCGCGTTTTAAACG
CGTTTACGGCAATGTTTATTCTttacactttcattttcaaaatctgttgA
ACATGGATTTTGGCTTGTGACGATTACCTCGCATAACATCTGTGAGCCCA
TGATGCGTTTGCCACTAGTTTTATCGACTATCGTTTAATTATTCAAAACT
GGTTAGTGACAAACGCCACCACTGAAGCATTTTTTTGGATTCTGAAGTAC
CAGAAGTATTTTGTGCAGAAAAAAGAAGTTCTGCAGTACTAAAATATAAA
GTGAAATGTCCCCCACTTTCAAATGTACCGCTAGTAGCTTTAATAtgagc
aaaaaagaaaaagtggtTGAANGGAtatttagatacatagatacatagat
acatggatgcgtagatatgtagatacatagatacatagatacatagatac
atggatgcgtagatatgtagatagatagatacatagatatgtggatatgt
agatacatagatacatggatgcgtagatatgtagatatatagatacgtag
atacgtagatatatagatacatggatatgtagatatatagatacatagat
acatagatacatggatgcgtagatatgtagatacataaNAGATTGAAAAG
TTAGAATAATTATGTTTGGTCTTCGATGAGTCTTGTGGAAaagggacttt
aaatttcatgtgCTTCCCTTTAAACTTGATGACTTCTAGTGTCAATCAAA
CAACAATAATGCAAACACAATATTGATTCTTTGNTTGATGTCTTCTAGTG
TCAATCAAACAACAATAATGCAAACACAATATTGATTTTTTAACAACAAA
AGCCTGGGGTTTTCAGTTGAAGCAAAACAATTGCTGGCCTCTCTCTTAAA
AACAATACAACATTTTTCCAACAATGATTTTATTATTCCCTAGTCAGTGG
atttcaaatttcatatttctagAATTTTCTCCACACTTGGCTGTAAAGTT
CAGATGGAAAACAGGGGGTAAAGAACAGACTTTGAAATCTTGTTTTGGTG
GATGAATACTTGTATGATTCTGGAAAAATGGCAGGGGAAAAAGTATCTAT
GTTACAGAatgaaaaaagtaaagtaaacTTAGCTTTTTCAGGTAAAGAAG
AATCGTAGAATCgttctttttctttgaatctTCTTTCCCAAATCTCTCCA
AATCTCGAACAGTCTCGAATTCTTCTTTTGTGACCAACATCATTTCCAAT
GTTTCCATTCACTTTTTAGCGCGCTTTATTCAATTTAGCCTCTGTAATTT
ACctttaagttaaaaaaaatgCGCGAGGCtaacaaatgtaaacaaacatg
gtAGCCACTCACTGCGCTGTTGTTGCATGGAAAGAGTTACATCGGATCAC
CCAAAGTAccctcatgttttttttttattttcttatctctgatcctgtct
ctctcttttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071137-exon-scaffold_6-1491911889:21468..22927 | TCONS_00071137-exon-scaffold_6-1491911889:21468..22927 | Clytia hemisphaerica | exon |
| TCONS_00071137-exon-scaffold_6-1510915933:21468..22927 | TCONS_00071137-exon-scaffold_6-1510915933:21468..22927 | Clytia hemisphaerica | exon |
| TCONS_00071137-exon-scaffold_6-1575043694:21468..22927 | TCONS_00071137-exon-scaffold_6-1575043694:21468..22927 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_6 | supercontig | scaffold_6:21468..22927 + |
Blast
The following BLAST results are available for this feature:
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