TCONS_00071126 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071126
Unique NameTCONS_00071126
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length297

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071126 ID=TCONS_00071126|Name=TCONS_00071126|organism=Clytia hemisphaerica|type=transcript|length=297bp
CTCATCAATATTTCTTAGAAACATAATCATGATAATATGATATCGCTTAA
CTGTAAAGTCTCGTTTCTCATCTCGTTTTTTATGGACCAAAGATTCATAG
GTTTGCAAGGAAAGGAAACAAAGCGTTCATAAAAGTTAAAGCTGTGATTG
agctagactagagtctacttttggctgaactttgctttttgataattttt
ttatgacgctgagtccagtgaagtagactaggagcgtttggcatgtcgcc
attttgagagaaaatcttaaaaatccaaataacaataaaactacttg
Run BLAST on NCBI

transcript from alignment at scaffold_58:1426234..1426530

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071126 ID=TCONS_00071126|Name=TCONS_00071126|organism=Clytia hemisphaerica|type=transcript|length=297bp|location=Sequence derived from alignment at scaffold_58:1426234..1426530 (Clytia hemisphaerica)
caagtagttttattgttatttggatttttaagattttctctcaaaatggc
gacatgccaaacgctcctagtctacttcactggactcagcgtcataaaaa
aattatcaaaaagcaaagttcagccaaaagtagactctagtctagctCAA
TCACAGCTTTAACTTTTATGAACGCTTTGTTTCCTTTCCTTGCAAACCTA
TGAATCTTTGGTCCATAAAAAACGAGATGAGAAACGAGACTTTACAGTTA
AGCGATATCATATTATCATGATTATGTTTCTAAGAAATATTGATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044208XLOC_044208Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071126-exon-scaffold_58-1491911889:1426234..1426530TCONS_00071126-exon-scaffold_58-1491911889:1426234..1426530Clytia hemisphaericaexon
TCONS_00071126-exon-scaffold_58-1510915933:1426234..1426530TCONS_00071126-exon-scaffold_58-1510915933:1426234..1426530Clytia hemisphaericaexon
TCONS_00071126-exon-scaffold_58-1575043694:1426234..1426530TCONS_00071126-exon-scaffold_58-1575043694:1426234..1426530Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:1426234..1426530 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	2.50702	1.93016	2.94249	1.03871	0.770825	2.73022	0.732583	0.868736	0.407662	1.21547	0	0.0265522	0.57167	0.274303	0.720314	0.804619	1.85287	0.776712	0.410777	0.981835	0.483492	0	0	1.68445	0.59194	1.17766	0	0.543373
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071126 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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