|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071107 ID=TCONS_00071107|Name=TCONS_00071107|organism=Clytia hemisphaerica|type=transcript|length=910bp
GTAAGATTGTTTGAAGGGCTATCTTAGAGATTTGAAGTCACTCAACCCCT
GGTTCTATCCAAGAGAAACAttaaaaacaagccaatcaaattgctaaaaa
gctttttgaagtttaaaaattagATCGATTCACTTAACttgaaaaagttt
gacaaaACCTCCATCCACCACCAAAATAGCAAGTTGAATGAAATTATCGC
TTCTTTGGCTACCATGTTGCCACCCGTTACGCTGAAATCGGCCAATCAAA
ATGTGCCGCGGGAAAATCGTCAACTCTGATTGGCTTGTTTTTCGAGAAAT
GGAAGGCGtcgatcacgtgaccaaaacatgaaaaaagccGTACGAAATTT
TTCTCGAGGCGAGGAAAATTTTGTGTGAACCTATGTCTCTTCTATGGCTT
GTCGCATAATGGCGCTGCCTTTATATCCTTTGAAGTAaactttttctgaa
agaaaaaggatTCAGCTTTCGATTCATGTACGTTTACCGATAGTCAAAGG
TCTTCATAAGCTTCCACAGGGCATTAAACACGAGTTTTCGTAGTCCAGGC
TAAACTGGGCAGGCCCGGGCCCGTAAACTATAGTCTGTGTAACGACCTTA
TATTTTGCGAGGgactggtgaaaatttcagggTCTTAAGTTGAAAAGCCG
TTTTGCGACAAGGTTTCAAAGTTGACCGGATGTTACGATTTCACAGACCT
TTGAAATCTTATAACTTGAGATTGCGTGatcgaatcaaaacaaagtaaaa
TGATTCGGAAAGAACTATCTTTTGGCTTCAAGAggctttttacagaattt
taaAATGATCTTCAGAGCTAGACCTACAGATCAATGAGTAAGGTaaattt
tcgtcaatttttgTGTTGGTTCGATTCCAGACGTTCGATTTTTGGCTTAC
TGAAACAgcc Run BLAST on NCBI transcript from alignment at scaffold_58:959944..960853 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071107 ID=TCONS_00071107|Name=TCONS_00071107|organism=Clytia hemisphaerica|type=transcript|length=910bp|location=Sequence derived from alignment at scaffold_58:959944..960853 (Clytia hemisphaerica)
ggcTGTTTCAGTAAGCCAAAAATCGAACGTCTGGAATCGAACCAACAcaa
aaattgacgaaaatttACCTTACTCATTGATCTGTAGGTCTAGCTCTGAA
GATCATTttaaaattctgtaaaaagccTCTTGAAGCCAAAAGATAGTTCT
TTCCGAATCAttttactttgttttgattcgatCACGCAATCTCAAGTTAT
AAGATTTCAAAGGTCTGTGAAATCGTAACATCCGGTCAACTTTGAAACCT
TGTCGCAAAACGGCTTTTCAACTTAAGAccctgaaattttcaccagtcCC
TCGCAAAATATAAGGTCGTTACACAGACTATAGTTTACGGGCCCGGGCCT
GCCCAGTTTAGCCTGGACTACGAAAACTCGTGTTTAATGCCCTGTGGAAG
CTTATGAAGACCTTTGACTATCGGTAAACGTACATGAATCGAAAGCTGAa
tcctttttctttcagaaaaagttTACTTCAAAGGATATAAAGGCAGCGCC
ATTATGCGACAAGCCATAGAAGAGACATAGGTTCACACAAAATTTTCCTC
GCCTCGAGAAAAATTTCGTACggcttttttcatgttttggtcacgtgatc
gaCGCCTTCCATTTCTCGAAAAACAAGCCAATCAGAGTTGACGATTTTCC
CGCGGCACATTTTGATTGGCCGATTTCAGCGTAACGGGTGGCAACATGGT
AGCCAAAGAAGCGATAATTTCATTCAACTTGCTATTTTGGTGGTGGATGG
AGGTtttgtcaaactttttcaaGTTAAGTGAATCGATctaatttttaaac
ttcaaaaagctttttagcaatttgattggcttgtttttaaTGTTTCTCTT
GGATAGAACCAGGGGTTGAGTGACTTCAAATCTCTAAGATAGCCCTTCAA
ACAATCTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071107-exon-scaffold_58-1491911889:959944..960853 | TCONS_00071107-exon-scaffold_58-1491911889:959944..960853 | Clytia hemisphaerica | exon |
| TCONS_00071107-exon-scaffold_58-1510915933:959944..960853 | TCONS_00071107-exon-scaffold_58-1510915933:959944..960853 | Clytia hemisphaerica | exon |
| TCONS_00071107-exon-scaffold_58-1575043694:959944..960853 | TCONS_00071107-exon-scaffold_58-1575043694:959944..960853 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:959944..960853 . |
Blast
The following BLAST results are available for this feature:
|
