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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071079 ID=TCONS_00071079|Name=TCONS_00071079|organism=Clytia hemisphaerica|type=transcript|length=1198bp
CTGCTGGCAAAAGTCCTTTGGCTTTGTTTCTCCTTAAAAGTTAATTGCTA
ATTgtgcaattaaattttttattttgataaagacaaagtctaatttttta
tttgaacacGCCAGACGAgaagtttacatttttttaccGAGAAATTTTCT
ATTCTACCAATTTTCCATATTATATTTCTTGACTTTCTAACTTTTTCATA
TAAATTaagtattttatatttgttttgtaTATTTCGTTTTCAACGACATT
TCAAATCTTAGCACTACAGAATTGTAGCGGATATTAGGCACTAAAAAAGT
CACGATGTATATTATCTCTCTAAATGACTTCAGACCATTCTTTTCTCGAT
GGACCAATTTCACAGAGAATTTATAGAGGGTATAACGTACTTCCTATCCT
ATGGAAAACTAAGCTACGTtaattttttacaaagtttATCGTTTTATATT
tcactttaatgaaagaattgaCATAAATAATATTAATtacaatataaaaa
tatatacaaataaaattcaagttttgtttttaaaaatcacacATAGAGAC
TCAAAGTATTACACCCTTTCTGAGATGTGCATTTCGTCATTTTGTGGCCG
AATGATATGGTGCATCGAGTCTTTGAAAAAGCTTGGACTCAATGGGGGTG
CACTTGGTCTACTTTCGAGGCTCCCAGCTATCGGTGTTGATCTGGCGCTG
TGACCAAAATTCGGATTGTACGCCGGTGCATCACTGATATCTTTATCGAT
GATGTTCAAAAAATCCTTGACGATCGCTTTTTTGTCTTTGAAAAACCATT
TCATTATGAAGGCCATTTTGATTTACTTCGATGAAAATTGTAATTTGGTG
GATCGTTATATCTCATTACCTCTTCAACGTACGACCAAATTTGTTGCTTT
CTTCTTCTGTGAGTTTCCAAAGTCGGTTACTTCTTCTATTCTGTTTTCGA
TTTAGTTTATGAATATTTATTATAGTACACGTCTTATCTTTATTAGAAAG
GTTTTGTGTTTTGATTTCTCGAGATTTCTGCGCGTCCTTTTATACCCTAT
ATTTTACCTCTCACACAACTTTCCCCAGTGTCAATCGTTCAGAAAACACG
TGTCAAGTACATCACAATCTCGTGCGGTCCTTTTTCATTGCACCAGGCAA
CGACCAtttgattacgtcattttcAACCAATTGAGTAACAGTATTTTC Run BLAST on NCBI transcript from alignment at scaffold_58:305466..306663 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071079 ID=TCONS_00071079|Name=TCONS_00071079|organism=Clytia hemisphaerica|type=transcript|length=1198bp|location=Sequence derived from alignment at scaffold_58:305466..306663 (Clytia hemisphaerica)
GAAAATACTGTTACTCAATTGGTTgaaaatgacgtaatcaaaTGGTCGTT
GCCTGGTGCAATGAAAAAGGACCGCACGAGATTGTGATGTACTTGACACG
TGTTTTCTGAACGATTGACACTGGGGAAAGTTGTGTGAGAGGTAAAATAT
AGGGTATAAAAGGACGCGCAGAAATCTCGAGAAATCAAAACACAAAACCT
TTCTAATAAAGATAAGACGTGTACTATAATAAATATTCATAAACTAAATC
GAAAACAGAATAGAAGAAGTAACCGACTTTGGAAACTCACAGAAGAAGAA
AGCAACAAATTTGGTCGTACGTTGAAGAGGTAATGAGATATAACGATCCA
CCAAATTACAATTTTCATCGAAGTAAATCAAAATGGCCTTCATAATGAAA
TGGTTTTTCAAAGACAAAAAAGCGATCGTCAAGGATTTTTTGAACATCAT
CGATAAAGATATCAGTGATGCACCGGCGTACAATCCGAATTTTGGTCACA
GCGCCAGATCAACACCGATAGCTGGGAGCCTCGAAAGTAGACCAAGTGCA
CCCCCATTGAGTCCAAGCTTTTTCAAAGACTCGATGCACCATATCATTCG
GCCACAAAATGACGAAATGCACATCTCAGAAAGGGTGTAATACTTTGAGT
CTCTATgtgtgatttttaaaaacaaaacttgaattttatttgtatatatt
tttatattgtaATTAATATTATTTATGtcaattctttcattaaagtgaAA
TATAAAACGATaaactttgtaaaaaattaACGTAGCTTAGTTTTCCATAG
GATAGGAAGTACGTTATACCCTCTATAAATTCTCTGTGAAATTGGTCCAT
CGAGAAAAGAATGGTCTGAAGTCATTTAGAGAGATAATATACATCGTGAC
TTTTTTAGTGCCTAATATCCGCTACAATTCTGTAGTGCTAAGATTTGAAA
TGTCGTTGAAAACGAAATAtacaaaacaaatataaaatacttAATTTATA
TGAAAAAGTTAGAAAGTCAAGAAATATAATATGGAAAATTGGTAGAATAG
AAAATTTCTCggtaaaaaaatgtaaacttcTCGTCTGGCgtgttcaaata
aaaaattagactttgtctttatcaaaataaaaaatttaattgcacAATTA
GCAATTAACTTTTAAGGAGAAACAAAGCCAAAGGACTTTTGCCAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071079-exon-scaffold_58-1491911889:305466..306663 | TCONS_00071079-exon-scaffold_58-1491911889:305466..306663 | Clytia hemisphaerica | exon |
| TCONS_00071079-exon-scaffold_58-1510915933:305466..306663 | TCONS_00071079-exon-scaffold_58-1510915933:305466..306663 | Clytia hemisphaerica | exon |
| TCONS_00071079-exon-scaffold_58-1575043694:305466..306663 | TCONS_00071079-exon-scaffold_58-1575043694:305466..306663 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:305466..306663 . |
Blast
The following BLAST results are available for this feature:
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