TCONS_00071078 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071078
Unique NameTCONS_00071078
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3031

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071078 ID=TCONS_00071078|Name=TCONS_00071078|organism=Clytia hemisphaerica|type=transcript|length=3031bp
ATTTTGTCAGCTTTATTCACCAATCCAGACACTTTCTGATatcgaaaata
ttttaatattagacttgttttattatattttttgttgaaaatctcATTCT
CTTTCAACATTTCCCTTGAAATTGAGTTTTTTGCCCATATTCTCCATTAC
ACAGTTCTTCAGTGAAAGTTAGAAAGATGTCACAGATCCTAAGGGTGGTC
GGCCTACAAGAATCCTTAGAAAATCATTTTGacatttaatttattttcat
attcTTTAGAGATAAAAAATGTCGCTTTTTTCAGCTGGTCCAAATATTGA
AGTTATCAAAACTACTGGtcaaaaattaaagatttcTACTTCCAGTAGAC
TTGGTCACATTATAGATGGAAAAGGAGAGTTGGTGTTAATGCGATCCAAA
AATGGAAATAGTTTTAGCCTCAACATAAAAAATGATACTGGTAcgaaaaa
agattctttcaaattcaattatCCCAAGGATTCTGTGAAATGCAGTTTCA
GAGAAAACCAACTTTGTTTCACCTATACCATTAAAACCACAAACATCAAG
ACTGGAATCATAAGTGGTGAAATTTTGGATCTTAAATCGTTCAAGGAATT
TAATTCGTTGATGAAACAGATGGAAACAAAACGATTCAAACCGATTGAAA
TTGTTTCTTCAGGAAGTAATATTAATGCAACAAAACCAAGTATTCAATCC
CTTAGCCAAAAGAACAGAAGTTTTGAATACTGTTCCAATACTGAGACTGA
AACAGGATCGTTTAAGACGGAGCAAAATGCGATAACTCCTAAGCGCGAGA
GTGACAACATGAATTCAAAAGAGAACACACCTAAATCAATACCTAAGAGG
ATGGCAATGAAGATGAAAGGGGGAGAAGATAACAGGAAACCTCTGGATAC
tttgaaaaccaaacagttCTACAGTAAAGACACCAATACACCGAAGAGGG
AAGTTAAATCAAACTTTCCTGTTTATTCACAAAGTAAATTCAACAAGATT
CCCAAATTTATTAAAAACAGGCTACCTTCTCCAATTCCTTTTCGTAAGAA
CAAAGAGAAAATTACAAGGGAATCAAATGAAAGTATTGAAGACTTTTTTG
AAGATGATAATTCACTTATTGGATTTGCTAATTTGGGAAATACGTGTTAC
ATGAATGCAATACTCCAATGCCTATTAAACATACCAAATTTCTATCAAGA
ACTACACAATCAAAACAATCTTGCTGTCTTACCAAAAGAAAGTCTTTATA
AACGTCTTTGTCAGCTTGGTTTTGCTAAACACAATCTTCAAGGATCAGAA
ACACAGAAACAACATTTACAACTGGTGAAAGAATCAATCTCTTCTGCTGC
CAATCGGTTTTCTGGTTACTCGCAACATGATGCTCATGAATTCCTTTGTC
AATGCATGGATCAATTGAAGGAAGACTTGTTAACtcaaatgacaaagaaa
aaagaagaaatgcaATTGTCTattgaagaattgaaatcagTTTTTGTTTG
TCCGATTAAAGAGAACTTGGAGACCACAGTAACACACTCTATTAGATGTC
TTGGTTGTAAAGAGAAAGTTATTAAAGATGAAGAGTACCACGACTTTTCT
CTTGTTATTCCAGAATATGATGAGAATTTTAACCCTGGTACACTAAGTAT
TGAAAAATTACTGAATCTTTATTTTGCTGATGAAGAAATCGAGTACACAt
gtgaaaaatgtcaaaacagTAGTTCAGTGttaacccaccaaatgaaaaaG
CTTCCACGTATCCTTGTCTTACATTTAAAGAGGTATGACAGTTATGAGAT
GAAGAAATCAGATTCCATCAAAATTCCTAAAATCATGGACATCTCAAAAG
TTGTCTCTGATGAAGTTGCTTTTCCATCCGATTTCAATCTTGATTGCTCT
TTGTGGAAAGATTCTACTACCCTCAAAAGTGGAGTCAAACGTAAATCTGA
AGACTCGAGTTTTCTTTCTAATGCACCACTAAATAAGACACCAAAAGTCA
ACAGAAATTCTTACATCAATGAAATGAGTGCTGCAGAAATACTTGCTATC
AGTGCTAGAGAAAGTCGTAAAGAGGAAAGTAATTCGTCGTACAGCAATCC
ATCTCACAGCTTCACAAAGATTCAAGGACCACGTAAAACCTTGACTTTTA
CCTCAGACAGTGAGTTTGATTCAAATATGGAGGTCAAAACTGAGCCAAAA
CTATCGCCAGAAGAGCAGCAGATCAAAGAAGCAATGGAATTAAGTATACA
GGAATACAAATCACAACAGAGACTTGATATGAGTACTTTTTCACTGTCCA
AACAAACCAGTACTCCTTCATCAATTAAAACTGAACCTTTCTTCCAAGTT
TTATCCTCAGATAGTGATGCTATAACAGATGAGAAGCAAACCTATCGTTT
AGTGGGTGTTGTCAATCACCATGGTATGAACACGGCTAGTGGTCACTACA
CCTGTGATTGTTATGATTTCAAATCCAAACAATGGCGTAATTACAATGAT
TCGTCTGTCAAAGAAATGGATGAGTATGATTGGAACAGGAGATCTTCAAG
TGCGTACATTGTCTTTTATATGCACGACAAATGTTATCAAtccattcaaa
ataaatactaaagttttcttttttacagcTTTTTAAAATCTGTTATTTTG
TTATTATGTACATAATTAAAAAAAGCAAGTAACATTCTCAGTCAAAAACC
ATTTATCAATCCGAAACTTTTTTGACAGTGCCTTTATGCTGTACGTTTTA
TCTATGAAGTAGCCTTTttaaacaagaaaaatcaaacgcTTCTTCTTTGA
ACTTCTAAGCTAGCTTTGACATGCGAGAATGACTTTTAGCCCTACAGTTC
ACCTAATATTATATTTATCTTTCAAGGCAGTTccatcatttttgttttca
ataattattttcacAGTTTATtgtacattttttaattttcttgaaacGAA
AACTGTTTATCCTGACTTCCTCACAAATAACAGACACAAatgattttaac
tttttagagtGTCTTTTTCACCTGTTTTCAC
Run BLAST on NCBI

protein sequence of TCONS_00071078-protein

>TCONS_00071078-protein ID=TCONS_00071078-protein|Name=TCONS_00071078-protein|organism=Clytia hemisphaerica|type=polypeptide|length=780bp
MSLFSAGPNIEVIKTTGQKLKISTSSRLGHIIDGKGELVLMRSKNGNSFS
LNIKNDTGTKKDSFKFNYPKDSVKCSFRENQLCFTYTIKTTNIKTGIISG
EILDLKSFKEFNSLMKQMETKRFKPIEIVSSGSNINATKPSIQSLSQKNR
SFEYCSNTETETGSFKTEQNAITPKRESDNMNSKENTPKSIPKRMAMKMK
GGEDNRKPLDTLKTKQFYSKDTNTPKREVKSNFPVYSQSKFNKIPKFIKN
RLPSPIPFRKNKEKITRESNESIEDFFEDDNSLIGFANLGNTCYMNAILQ
CLLNIPNFYQELHNQNNLAVLPKESLYKRLCQLGFAKHNLQGSETQKQHL
QLVKESISSAANRFSGYSQHDAHEFLCQCMDQLKEDLLTQMTKKKEEMQL
SIEELKSVFVCPIKENLETTVTHSIRCLGCKEKVIKDEEYHDFSLVIPEY
DENFNPGTLSIEKLLNLYFADEEIEYTCEKCQNSSSVLTHQMKKLPRILV
LHLKRYDSYEMKKSDSIKIPKIMDISKVVSDEVAFPSDFNLDCSLWKDST
TLKSGVKRKSEDSSFLSNAPLNKTPKVNRNSYINEMSAAEILAISARESR
KEESNSSYSNPSHSFTKIQGPRKTLTFTSDSEFDSNMEVKTEPKLSPEEQ
QIKEAMELSIQEYKSQQRLDMSTFSLSKQTSTPSSIKTEPFFQVLSSDSD
AITDEKQTYRLVGVVNHHGMNTASGHYTCDCYDFKSKQWRNYNDSSVKEM
DEYDWNRRSSSAYIVFYMHDKCYQSIQNKY
Run BLAST on NCBI

transcript from alignment at scaffold_58:281223..284253

Legend: exonthree_prime_UTRCDSfive_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071078 ID=TCONS_00071078|Name=TCONS_00071078|organism=Clytia hemisphaerica|type=transcript|length=3031bp|location=Sequence derived from alignment at scaffold_58:281223..284253 (Clytia hemisphaerica)
GTGAAAACAGGTGAAAAAGACactctaaaaagttaaaatcatTTGTGTCT GTTATTTGTGAGGAAGTCAGGATAAACAGTTTTCgtttcaagaaaattaa aaaatgtacaATAAACTgtgaaaataattattgaaaacaaaaatgatggA ACTGCCTTGAAAGATAAATATAATATTAGGTGAACTGTAGGGCTAAAAGT CATTCTCGCATGTCAAAGCTAGCTTAGAAGTTCAAAGAAGAAgcgtttga tttttcttgtttaaAAAGGCTACTTCATAGATAAAACGTACAGCATAAAG GCACTGTCAAAAAAGTTTCGGATTGATAAATGGTTTTTGACTGAGAATGT TACTTGCTTTTTTTAATTATGTACATAATAACAAAATAACAGATTTTAAA AAgctgtaaaaaagaaaactttagtatttattttgaatggaTTGATAACA TTTGTCGTGCATATAAAAGACAATGTACGCACTTGAAGATCTCCTGTTCC AATCATACTCATCCATTTCTTTGACAGACGAATCATTGTAATTACGCCAT TGTTTGGATTTGAAATCATAACAATCACAGGTGTAGTGACCACTAGCCGT GTTCATACCATGGTGATTGACAACACCCACTAAACGATAGGTTTGCTTCT CATCTGTTATAGCATCACTATCTGAGGATAAAACTTGGAAGAAAGGTTCA GTTTTAATTGATGAAGGAGTACTGGTTTGTTTGGACAGTGAAAAAGTACT CATATCAAGTCTCTGTTGTGATTTGTATTCCTGTATACTTAATTCCATTG CTTCTTTGATCTGCTGCTCTTCTGGCGATAGTTTTGGCTCAGTTTTGACC TCCATATTTGAATCAAACTCACTGTCTGAGGTAAAAGTCAAGGTTTTACG TGGTCCTTGAATCTTTGTGAAGCTGTGAGATGGATTGCTGTACGACGAAT TACTTTCCTCTTTACGACTTTCTCTAGCACTGATAGCAAGTATTTCTGCA GCACTCATTTCATTGATGTAAGAATTTCTGTTGACTTTTGGTGTCTTATT TAGTGGTGCATTAGAAAGAAAACTCGAGTCTTCAGATTTACGTTTGACTC CACTTTTGAGGGTAGTAGAATCTTTCCACAAAGAGCAATCAAGATTGAAA TCGGATGGAAAAGCAACTTCATCAGAGACAACTTTTGAGATGTCCATGAT TTTAGGAATTTTGATGGAATCTGATTTCTTCATCTCATAACTGTCATACC TCTTTAAATGTAAGACAAGGATACGTGGAAGCtttttcatttggtgggtt aaCACTGAACTActgttttgacatttttcacaTGTGTACTCGATTTCTTC ATCAGCAAAATAAAGATTCAGTAATTTTTCAATACTTAGTGTACCAGGGT TAAAATTCTCATCATATTCTGGAATAACAAGAGAAAAGTCGTGGTACTCT TCATCTTTAATAACTTTCTCTTTACAACCAAGACATCTAATAGAGTGTGT TACTGTGGTCTCCAAGTTCTCTTTAATCGGACAAACAAAAActgatttca attcttcaatAGACAATtgcatttcttcttttttctttgtcatttgaGTT AACAAGTCTTCCTTCAATTGATCCATGCATTGACAAAGGAATTCATGAGC ATCATGTTGCGAGTAACCAGAAAACCGATTGGCAGCAGAAGAGATTGATT CTTTCACCAGTTGTAAATGTTGTTTCTGTGTTTCTGATCCTTGAAGATTG TGTTTAGCAAAACCAAGCTGACAAAGACGTTTATAAAGACTTTCTTTTGG TAAGACAGCAAGATTGTTTTGATTGTGTAGTTCTTGATAGAAATTTGGTA TGTTTAATAGGCATTGGAGTATTGCATTCATGTAACACGTATTTCCCAAA TTAGCAAATCCAATAAGTGAATTATCATCTTCAAAAAAGTCTTCAATACT TTCATTTGATTCCCTTGTAATTTTCTCTTTGTTCTTACGAAAAGGAATTG GAGAAGGTAGCCTGTTTTTAATAAATTTGGGAATCTTGTTGAATTTACTT TGTGAATAAACAGGAAAGTTTGATTTAACTTCCCTCTTCGGTGTATTGGT GTCTTTACTGTAGaactgtttggttttcaaaGTATCCAGAGGTTTCCTGT TATCTTCTCCCCCTTTCATCTTCATTGCCATCCTCTTAGGTATTGATTTA GGTGTGTTCTCTTTTGAATTCATGTTGTCACTCTCGCGCTTAGGAGTTAT CGCATTTTGCTCCGTCTTAAACGATCCTGTTTCAGTCTCAGTATTGGAAC AGTATTCAAAACTTCTGTTCTTTTGGCTAAGGGATTGAATACTTGGTTTT GTTGCATTAATATTACTTCCTGAAGAAACAATTTCAATCGGTTTGAATCG TTTTGTTTCCATCTGTTTCATCAACGAATTAAATTCCTTGAACGATTTAA GATCCAAAATTTCACCACTTATGATTCCAGTCTTGATGTTTGTGGTTTTA ATGGTATAGGTGAAACAAAGTTGGTTTTCTCTGAAACTGCATTTCACAGA ATCCTTGGGataattgaatttgaaagaatcttttttcgTACCAGTATCAT TTTTTATGTTGAGGCTAAAACTATTTCCATTTTTGGATCGCATTAACACC AACTCTCCTTTTCCATCTATAATGTGACCAAGTCTACTGGAAGTAgaaat ctttaatttttgaCCAGTAGTTTTGATAACTTCAATATTTGGACCAGCTG AAAAAAGCGACATTTTTTATCTCTAAAgaatatgaaaataaattaaatgt CAAAATGATTTTCTAAGGATTCTTGTAGGCCGACCACCCTTAGGATCTGT GACATCTTTCTAACTTTCACTGAAGAACTGTGTAATGGAGAATATGGGCA AAAAACTCAATTTCAAGGGAAATGTTGAAAGAGAATgagattttcaacaa aaaatataataaaacaagtctaatattaaaatattttcgatATCAGAAAG TGTCTGGATTGGTGAATAAAGCTGACAAAAT

Coding sequence (CDS) from alignment at scaffold_58:281223..284253

>TCONS_00071078 ID=TCONS_00071078|Name=TCONS_00071078|organism=Clytia hemisphaerica|type=CDS|length=2343bp|location=Sequence derived from alignment at scaffold_58:281223..284253 (Clytia hemisphaerica)
ttagtatttattttgaatggaTTGATAACATTTGTCGTGCATATAAAAGA
CAATGTACGCACTTGAAGATCTCCTGTTCCAATCATACTCATCCATTTCT
TTGACAGACGAATCATTGTAATTACGCCATTGTTTGGATTTGAAATCATA
ACAATCACAGGTGTAGTGACCACTAGCCGTGTTCATACCATGGTGATTGA
CAACACCCACTAAACGATAGGTTTGCTTCTCATCTGTTATAGCATCACTA
TCTGAGGATAAAACTTGGAAGAAAGGTTCAGTTTTAATTGATGAAGGAGT
ACTGGTTTGTTTGGACAGTGAAAAAGTACTCATATCAAGTCTCTGTTGTG
ATTTGTATTCCTGTATACTTAATTCCATTGCTTCTTTGATCTGCTGCTCT
TCTGGCGATAGTTTTGGCTCAGTTTTGACCTCCATATTTGAATCAAACTC
ACTGTCTGAGGTAAAAGTCAAGGTTTTACGTGGTCCTTGAATCTTTGTGA
AGCTGTGAGATGGATTGCTGTACGACGAATTACTTTCCTCTTTACGACTT
TCTCTAGCACTGATAGCAAGTATTTCTGCAGCACTCATTTCATTGATGTA
AGAATTTCTGTTGACTTTTGGTGTCTTATTTAGTGGTGCATTAGAAAGAA
AACTCGAGTCTTCAGATTTACGTTTGACTCCACTTTTGAGGGTAGTAGAA
TCTTTCCACAAAGAGCAATCAAGATTGAAATCGGATGGAAAAGCAACTTC
ATCAGAGACAACTTTTGAGATGTCCATGATTTTAGGAATTTTGATGGAAT
CTGATTTCTTCATCTCATAACTGTCATACCTCTTTAAATGTAAGACAAGG
ATACGTGGAAGCtttttcatttggtgggttaaCACTGAACTActgttttg
acatttttcacaTGTGTACTCGATTTCTTCATCAGCAAAATAAAGATTCA
GTAATTTTTCAATACTTAGTGTACCAGGGTTAAAATTCTCATCATATTCT
GGAATAACAAGAGAAAAGTCGTGGTACTCTTCATCTTTAATAACTTTCTC
TTTACAACCAAGACATCTAATAGAGTGTGTTACTGTGGTCTCCAAGTTCT
CTTTAATCGGACAAACAAAAActgatttcaattcttcaatAGACAATtgc
atttcttcttttttctttgtcatttgaGTTAACAAGTCTTCCTTCAATTG
ATCCATGCATTGACAAAGGAATTCATGAGCATCATGTTGCGAGTAACCAG
AAAACCGATTGGCAGCAGAAGAGATTGATTCTTTCACCAGTTGTAAATGT
TGTTTCTGTGTTTCTGATCCTTGAAGATTGTGTTTAGCAAAACCAAGCTG
ACAAAGACGTTTATAAAGACTTTCTTTTGGTAAGACAGCAAGATTGTTTT
GATTGTGTAGTTCTTGATAGAAATTTGGTATGTTTAATAGGCATTGGAGT
ATTGCATTCATGTAACACGTATTTCCCAAATTAGCAAATCCAATAAGTGA
ATTATCATCTTCAAAAAAGTCTTCAATACTTTCATTTGATTCCCTTGTAA
TTTTCTCTTTGTTCTTACGAAAAGGAATTGGAGAAGGTAGCCTGTTTTTA
ATAAATTTGGGAATCTTGTTGAATTTACTTTGTGAATAAACAGGAAAGTT
TGATTTAACTTCCCTCTTCGGTGTATTGGTGTCTTTACTGTAGaactgtt
tggttttcaaaGTATCCAGAGGTTTCCTGTTATCTTCTCCCCCTTTCATC
TTCATTGCCATCCTCTTAGGTATTGATTTAGGTGTGTTCTCTTTTGAATT
CATGTTGTCACTCTCGCGCTTAGGAGTTATCGCATTTTGCTCCGTCTTAA
ACGATCCTGTTTCAGTCTCAGTATTGGAACAGTATTCAAAACTTCTGTTC
TTTTGGCTAAGGGATTGAATACTTGGTTTTGTTGCATTAATATTACTTCC
TGAAGAAACAATTTCAATCGGTTTGAATCGTTTTGTTTCCATCTGTTTCA
TCAACGAATTAAATTCCTTGAACGATTTAAGATCCAAAATTTCACCACTT
ATGATTCCAGTCTTGATGTTTGTGGTTTTAATGGTATAGGTGAAACAAAG
TTGGTTTTCTCTGAAACTGCATTTCACAGAATCCTTGGGataattgaatt
tgaaagaatcttttttcgTACCAGTATCATTTTTTATGTTGAGGCTAAAA
CTATTTCCATTTTTGGATCGCATTAACACCAACTCTCCTTTTCCATCTAT
AATGTGACCAAGTCTACTGGAAGTAgaaatctttaatttttgaCCAGTAG
TTTTGATAACTTCAATATTTGGACCAGCTGAAAAAAGCGACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044160XLOC_044160Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071078-proteinTCONS_00071078-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071078-exon-scaffold_58-1491911889:281223..284253TCONS_00071078-exon-scaffold_58-1491911889:281223..284253Clytia hemisphaericaexon
TCONS_00071078-exon-scaffold_58-1510915933:281223..284253TCONS_00071078-exon-scaffold_58-1510915933:281223..284253Clytia hemisphaericaexon
TCONS_00071078-exon-scaffold_58-1575043694:281223..284253TCONS_00071078-exon-scaffold_58-1575043694:281223..284253Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:281223..284253 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.0758 10.7884 2.67608 1.78256 8.08698 7.0335 5.99651 6.21912 3.08287 2.87381 2.54739 1.73317 1.68059 1.4414 1.59193 2.12974 3.22767 3.26957 0.748392 0.964939 3.42776 3.11266 14.7173 14.6383 5.65559 8.73371 2.03414 1.54538 8.49784 9.85216
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016579 protein deubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
Blast
BLAST of TCONS_00071078 vs. Swiss-Prot (Human)
Match: UBP37 (Ubiquitin carboxyl-terminal hydrolase 37 OS=Homo sapiens GN=USP37 PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 2.584e-51
Identity = 152/448 (33.93%), Postives = 217/448 (48.44%), Query Frame = 2
Query:  659 SGSNINATKPSIQSLSQKNRSFEYCSNTETETGSFKT--EQNAITPKRESDNMNSKENTPKS-----IPKRMAMKMKGGEDNR-KPLDTLKTKQFY----------SKDTNTPKREVKSNFPVYSQSKFNKIPKFIKNRLPSPIPFRKNK----EKITRESNESIEDFFEDDNSLIGFANLGNTCYMNAILQCLLNIPNFYQELHNQN-NLAVLPKESLYKRLCQLGFAKHNLQGSETQKQHLQLVKESISSAANRFSGYSQHDAHEFLCQCMDQLKEDLLTQMTKKKEEMQLSIEE------LKSVFVCPIKENLETTVTHSIRCLGCKEKVIKDEEYHDFSLVIPEYDENFNPGTLSIEKLLNLYFADEEIEYTCEKCQNSSSVLTHQMKKLPRILVLHLKRYD-----SYEMKKSDSIKIPKIMDISKVVSDEVAFPSDFNLDCS 1900
            +GS I  T PS+ S S   RS    + TE       T  E N   PK    + N+K  T  S       +   + +K  E+NR   L  L++  FY          S  TN  +  V S  P   +S            LP P+P    K    +  T  +   +         L GF+NLGNTCYMNAILQ L ++ +F  +L  Q      +P  +L +R   L   K ++  SET+K  L+ VK +IS+ A RFSGY Q+DAHEFL QC+DQLKED + ++ K  +   +S EE          + CP+  NLE  V HSI C  C E + K E+++D S+ +P   +   P   SI+  L+L+F  EE+EY+CEKC    +++ H+  +LPR+L+LHLKRY      S   K    + IP+ + +S   ++    P  F L  S
Sbjct:  175 AGSGIARTIPSLTSTSTPLRSGLLENRTEKRKRMISTGSELNEDYPKENDSSSNNKAMTDPSRKYLTSSREKQLSLKQSEENRTSGLLPLQSSSFYGSRAGSKEHSSGGTNLDRTNVSSQTPSAKRSL---------GFLPQPVPLSVKKLRCNQDYTGWNKPRVPLSSHQQQQLQGFSNLGNTCYMNAILQSLFSLQSFANDLLKQGIPWKKIPLNALIRRFAHL-LVKKDICNSETKKDLLKKVKNAISATAERFSGYMQNDAHEFLSQCLDQLKED-MEKLNKTWKTEPVSGEENSPDISATRAYTCPVITNLEFEVQHSIICKACGEIIPKREQFNDLSIDLPRRKKPLPP--RSIQDSLDLFFRAEELEYSCEKCGGKCALVRHKFNRLPRVLILHLKRYSFNVALSLNNKIGQQVIIPRYLTLSSHCTENTKPP--FTLGWS 607          
The following BLAST results are available for this feature:
BLAST of TCONS_00071078 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBP372.584e-5133.93Ubiquitin carboxyl-terminal hydrolase 37 OS=Homo s... [more]
back to top