TCONS_00071006 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071006
Unique NameTCONS_00071006
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1719

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071006 ID=TCONS_00071006|Name=TCONS_00071006|organism=Clytia hemisphaerica|type=transcript|length=1719bp
atttttgtttgtattttttttttaggaatataaaaacaaatgattcactc
aaaaactttttctcaaacACGTTGGATGAATTTagatgttttcaatgaaa
aatgagTAGATGGAGAAGTACGTGTCCCGACAAATTACTGACCAGTATTG
CAAATATCTCAGAAGCTCGTTTGTACTTGTTGCGACAAACTGGTCCCACT
GGATTCCTTTTGAAAGAGCATGATGGAGAGACGAAGTTCAAGgttttgct
TGGCGCTGTTCACTCGTGCGAttgtaatttctttttgaaagagAGGGAGC
TTTGTAAACACATCCTATGgaTTTTAATCAGAAAATTTCGGATCCAAAAA
GAAGATCCAATCGCGTTCCAGCTTGGTCTTTGTGAACGTGAGCTAAACCA
TGTTCTGTATGGTCAGAAGCAAGTTGAGAATAAACAACCAACCAAAGCAG
CATCTGCTGGTGCCAGAGAAATGTTGAAACAGAAGAAGATCGAGAAAGAA
GATGTCTGCCCCATCTGTCAAGATGAAATATACAAAACGAAAAAGAGTTT
AACTTACTGCAAgtttGGATGTGGAAACAGTGTTCACGTTTCCTGTATCA
AGATTTGGGCTGACCATCAGCATAAATCAAACAACGAAGAAGTTATCAAG
TGCCCGCTCTGTCGAACCGAATTCGCTAGCTATAAAAGTATATTGCAAGA
ACATCGTCGCTCTGTCACTCGATCTCAGATGAGAAAAAATTCCCTGCTCA
GTATTTGTGTTGGATGTAAACAAAGAGCTCCTTCTACATCTTCTACTCAA
TCTGTTTACAAATGCAACACATGCAATTCGTTTCTTTGTCAATCCTGTTT
CCATCCAAATAAACATTATGGACACcaagtgaaaacaaaacatGGAGGAG
GAGAGAAGTGGGAAGACTTGGGTTATAAAGAAGTTAATCTCTGTATTGGA
GGTTTCTCCTCTTCCATGACGTCATCACATGGCAAACAATTTCCAAGCTC
ACCTTCAGCACCAGTGAGGCCGAAACAAAAATTATCAAGACTTCGAAGTT
CATCCCAAACTGACGTCCGTGATTTAGCCATCAGCGGACTCAGTCTAAAC
TCTGAAAAATTGGAACTAAACTATAAACCTGTTAGCGAACAAAGATCTTC
AAACGCTTCTACTGCAAGATTTCGATTACCACCGATCGGGAAAACGAGAG
GTTTAATCGGAATGTCGGGGAAACATCGGAGTAAAAGTGGGACCGGGAAT
CAAACAGAAGAACGGAAGGAAGTGGATTTCACCTTATACTCATCACCTCT
CAACTCAAGGACGGAAAATCTGCGTTGAGAGAATTTTTAGAATGATCAGA
GGTGGAGTGGATATCATTTTTTGAGAGAAGTTCTGAATCTTCATTCGAAT
ACCGATAGATCCCATCGAAGAGCTTTGGTTGAACATTATACAGTGCATTG
TATCGCAATGAAGTTTTTTCTTGGAAAGAATTAAaccaaatatcttttta
gaagttataattattttttaaaaccAAATGTACATATATTGAAtacgaaa
tttattttttacattattTAAGTTTATATATAAACAATTTCGTGTGTGCG
TCAATGAAAAGATAGTAAATAAATCATTAATATATCGTTTTCTTCCCCAA
ATATCTCCTCCAGTTATTGACGAATTATTTTGACTGCAGGGGGTGGTGTA
GCGTGGGCTTCGATCTCCt
Run BLAST on NCBI

transcript from alignment at scaffold_58:943423..951501-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071006 ID=TCONS_00071006|Name=TCONS_00071006|organism=Clytia hemisphaerica|type=transcript|length=8079bp|location=Sequence derived from alignment at scaffold_58:943423..951501- (Clytia hemisphaerica)
ATTTTTGTTTGTATTTTTTTTTTAGGAATATAAAAACAAATGATTCACTC
AAAAACTTTTTCTCAAACACGTTGGATGAATTTAGATGTTTTCAATGAAA
AATGAGTAGATGGAGAAGTACGTGTCCCGACAAATTACTGACCAGTATTG
CAAATATCTCAGAAGCTCGTTTGTACTTGTTGCGACAAACTGGTCCCACT
GGATTCCTTTTGAAAGAGCATGATGGAGAGACGAAGTTCAAGGTCTGGAC
ATTTCCTACATTTTCTGGATCAACTAGAAATTTGCAAAGAATACTGCAGA
TTAAGAAATGCTTTCTGACAGTTAATTAGATGTTCTGTTTTTTTGTTTTT
AGGTTTTGCTTGGCGCTGTTCACTCGTGCGATTGTAATTTCTTTTTGAAA
GAGAGGGAGCTTTGTAAACACATCCTATGGTATGTGTTCTTTAACATCAT
TTATGTCTCATTTCTGCGTCACCAAACATAATTATCAACAAGAAAATATT
GAACAGATTTGACTCGGGGTGTTCCGGTCGTTTAGTTGTGAAGTGAGATG
GAATTTAATTTAGTTCCCGCTTCTATGCTGACTTCAAACTTTGTTTTTGT
TTTTCAGGATTTTAATCAGAAAATTTCGGATCCAAAAAGAAGATCCAAGT
ATGTAGTCTATCAGATCATTTAATATTTCCTCAGTTAGCACTAAAGTCTT
TACACAGTTGAATGAAACAAATTGAAAGATCTTTAAACAAAGATTTCCCN
GGCCCCCCCCCCCTGATTAGACTGTTTATTGTTTTCCTTGAATATTTTTA
AACTCCTGCAACCCAGGAAGAAAGAAAAGCGGTCAAACTATCCAAACCCT
TTTGAAAAAGATTTGATTTTTATTAGTCGCGTTCCAGCTTGGTCTTTGTG
AACGTGAGCTAAACCATGTTCTGTATGGTCAGAAGCAAGTTGAGAATAAA
CAACCAACCAAAGCAGCATCTGCTGGTGCCAGAGAAATGTTGAAACAGAA
GAAGATCGAGAAAGAAGATGTCTGCCCCATCTGTCAAGATGAAATATACA
AAACGAAAAAGAGTTTAACTTACTGCAAGTATGTAAATTGTTTGTTTGAT
CTCAGAAGGCAGGCACAAAGCAGGCGGCCACCTGACCACATGATTTCAAA
ATAAAGTCAGATCCTGCTTAAATAACCTTTAAAAACAGACCTGTTTTAGG
GCTAAAATTCAAAAAAGTGCCTCCTTAGTCAATGTACAATTGTCACTTTC
AAAGTAGAGCGGCGGTCCCTGGAAAGCATTTAAGACACACAGAATTCTAT
TCAAAGATATTTACATTTTGCAAGCTTTTGAAAGGAATCTTTCCAGATAA
ACGTTTAGGAATTTTATTTTTTAGGTTTGGATGTGGAAACAGTGTTCACG
TTTCCTGTCTCAAGATTTGGGCTGACCATCAGCATAAATCAAACAACGAA
GAAGTTATCAAGTGCCCGCTCTGTCGAACCGAATTCGCTAGCTATAAAGT
ATGACAGTGACCTCGTTTATTTCAAACTTTCGTTTAATCAAATCCCTTGG
TGCAAAAATTTCCCGTTTCGAATGTTTACCTTTTCTTTCATTATTTGTAG
AGTATATTGCAAGAACATCGTCGCTCTGTCACTCGATCTCAGATGAGAAA
AAATTCCCTGCTCAGTATTTGTGTTGGATGTAAACAAAGAGCTCCTTCTA
CATCTTCTACTCAATCTGTTTACAAGTGAGTTATCCTATGTTCACATCAG
AAGGCGTGGATATTTCAACCTAAATGTGCTATTTTTTCAAATTTGAATTT
TGAATGAAAACATCTTTCAATAGTACGCCTCTTGAATTCTGTGGAATTTA
TCTTATATTTTTCTTTTTGAACCTTTTTTTTGATTAGCTACCCTCATTTT
ATTCTATGAAGTTCGAACATTTATCTTTAAGACAAAAGTCAACTTTAAAC
CATTTGAGTCTGCTCAATCACGTACCTCGAGTGCCTCAAGTGCCCTAGTG
CCTTAAAATTTCACGTNATTGTCTGTAATCAGGGTCACTGTGGGCAAATC
AGGGGGTAAATACACCACTTCTTGGTAGTTGTTGCCTGAATTTGGATGTT
TTTATTGTATGGTAGCCTCATATTTATGAAATTTTGAGATGGAAACCAGT
TATATACCCTTCAGTCATTTCTTAGTACTTTTGTTGACAACCTACACAAA
GTAATGACGGATTTAACTTAAATTATGGCCAAATTATAACATTTTTTGAT
ATAAGAGTGCTGTGTCATTGTTAAGGCCTGCTTTGATGAAAGATTTTCTA
ATCGTTTTGTGAAAACAAAACTAACGGTCCCAGGGGGGGGGCACGCAGTT
ACTACAAGACAGTATGACACTTACTACCGTGGTGGTACTGTATTCAGAAG
TTACAAATTGTAGTAACTGCTGTTTGGGGGTGGTGCCAAACACTAAAACT
AGCACTTTTGATGTAGTAAGTGCTTATATTTTAATTCTTTTTAAAGAAAT
TTCAAAATTTTTCACAAAAAATTTTTTTGTGAAAAAATTATTTGTTAAAA
AAATTCTTTTTGTTATAAATGGACGAAAAGAAATTTGNCCGTTGGCGCCA
AACAAGGAAGCGCCTCCTTAGTCAGTGTACAATTTTCACTTTCAAAGTAG
AGCGGCGGTCCCTGGAAAGCATTTAAGACACACAGAATTCTATTTAAAGA
TATTTACATTTTGCAAGCTTTTGAAAGGAATTTTTCCAGATAAACGTTTA
GGAATTTTCTTTTTTAGGTTTGGATGTGGAAACAGTGTTCACGTTTCCTG
TATCAAGATTTGGGCTGACCATCAGCATAAATCAAACAACGAAGAAGTTA
TCAAGTGCCCGCTCTGTCGAACCGAATTCGCTAGCTATAAAGTATGATAG
TGACCTCGTTTATTTTAAACTTTCGATCAAATCAAATCCCTTGGTGCAAA
AATTTCCCGTTTCGAATGTTTACCTTCTCTTTCATTTGTAGAGTATATTG
CAAGAACATCGTCGCTCTGTCACTCGATCTCAGATGAGAAAAAATTCCCT
GCTCAGTATTTGTGTTGGATGTAAACAAAGAGCTCCTTCTACATCTTCTA
CTCAATCTGTTTACAAGTGAGTTATCTTATGTTCACATCAGAAGGCGTGG
ATATTTCAACCTAAATTTGCTATTTTTTCAAATTTGAATTTTGAAGGGAA
AACATCTTTTAATAGTACGCCTCTTAAATTCTGTGGAATTTTTCTTTTTA
AATTTTTCATTTTAAATCTCTCATTTTATTCTATGAAGTTTGAACATTTA
TCTGATTAAGACAAAAGTCAACTTAAAACCATTTGAGTCTACTAAATCAC
GTACCTCACGTGCCCTAGTGCCTTAACTTTTTTACGTGCCTCTAGTGTCC
TAGTGCCTCGCGCGCATTTAGTGCCCTAGTGTCCTAGTGCTTTAAAATTT
CACATGTCCTAGTGCCCTAAAATTTTTACGTGCCCTAAAATTTTCACGTG
TCCTAAAATTTTCACTTGCCCTAAATTTTTCTTTTGCCCCAATTTTTTTT
AGCGATATGAGGTCTTTCTTATCGGTATTTCGGGATTAAGTCGATAAGTA
CTCGTGTATCGGTAATTGACAGCTTTTTTAGTGTCTCACGTGCCTCAAGT
GCCCTAGTGCCTTAAAATTTACCGTGCCCTAGTGCCCTAATTTTTTCGAC
TAATAACCTCAACCTTTGGATAATTTTCATTAAACTTATGTTGCCTTTCT
AAACACAGAAATTAGCTAATTAAAATATCGTTAAAGCTTTGTTTCAAATT
TTTAATTACTAACAGCCGAAATATCTGACCTCTTATTATTATTATTCTGA
ATATTTTTGTTCGACGACCTCGAATCATTTAAATGTATAATTATATCGCC
GTTGTGGAAAACAATTCTGAAAGAAAAACTAGCTGCTACGACAACGATCT
CGGTATGAACTCAAATGTTTCCACGTAGCCGTTGCAGTTGCAGTTGCAGT
TGTGACTTCGGAAACTCCGGAAGGTCCGGGAGTTGGAAAAAAATCGAAAA
ATTAATAAACGCCCTTACCCCCTCCCGTTTATTCGGCACCTGCGAGCAAA
GAGAAAGAAAGTGAGAGAAAAAGTGTCAGTGAATACTGTTGACAAGTACT
CGCTTGTGACAAGATAATTGCCCCTTGTTTCGACTGCAATTTTTACAGCT
ATAAGAACCGCTGACCACCACGTGCGCTGAGCGCCGAAAGCACGGTTATG
TATAAAAAGTTTAAATTCAAATGACGTAAATTCTCTACTTTTAAAATATT
TTAGCAATCAGAACTCAGCTAAAAAAATAATATTTTCGAATAATGCAGAA
CGTTACATCTGCGTGAAACTACTACAATTCGGATGCATTCCTAAAAAGAC
GCTACAAAATATGCTACTGATCAAACGTTTTTCATAAGTCTATCGAAAAT
ACAACAATTGTTTTTAACAAAACTAAAGTATGTTCACGATAAGTGTGCAC
TCTCTTTTTTTTTGTCTATAACCTTTTAAGGATTGCTTCAGTCGTAATAA
ATTTTGTACCGTTGGAAAGATATTAATGAGTGGAATAATTTGAATTAAAA
ATTGTTTTGAAAAATTTCAAAAATAAAGATGAAAAAAAGAAGAAAAAAAT
TAACTTCCTGTAGAATTGAGTTATAATTTTCCTTTTTACAGGAATGAAAC
TCCAATCTTAGAGCATCATCACTATGAAAATTTTTTTCATATTTTTATAA
ATATTCATTCAATGAAAATATATCAAATAAAGTTTGCCTCTACTTGACCC
AAAAAAAGAGAATAAAACAGGCTTTTTAGGGGTCAATCAGCTATAAACAT
TGTTTGATATCTTTTGACTGAAAGAATATTTTTGAAAAATTTGTTCACAG
TGATGACGCTCTAAGATTGGAGTTTCATTCCTGTGAAAATGAAAATTACA
ACTCAATTCTACAAGAAGTTTATTTTTTTCTTCTTCATTTTCACGTGAAA
AACAATAGGCCACGTGAAAATTTAAGGGCACATGAAAAAGGGGTAAACCA
GTCCCAAAAAGTTGTGCGAGACTTTTTTGATTTTTCTGTGATTTTTTTGT
GATTCTTGCCAATTTTCACGTGATTTGGATTTTGGATTTTTTTCAAGTAA
ATGTGAAAAATTTAGAGCACGTGAAAACAAATTGGGTACGTAGAAAAAAA
TAGGGCACGTGAAAAAATAAGGCGCGTGAAAAAATAAGGCGCGTGAAAAA
ATAGGACACGTGAAAAATCCAGGGCACTTAAGGCACGCGAGGCACTAGGG
CAATTGAGGCACTAGGGTACCAGAGGCACGTAAAAAAAGTTAAGGCACGT
GAGGCACGTGATTTAGCAGATTCAAACTATTTTAACCGCGCCAAGGATTG
TGAGCTTTATTTCGCATAACTTATTTCAGATGCAACACATGCAATTCGTT
TCTTTGTCAATCCTGTTTCCATCCAAATAAACATTATGGACACCAAGTGA
AAACAAAACATGTAAGAACAACATTCATTCATTTCTAAGTTCATACTATC
CAATATAACTGCCAAATTTATTTCCGCTGATACTTATAAGTTCACCATAT
AATACAATAGATGATTTATTCTTGAAGTTAAACTCCTCCATTCAAGCCCT
TCTCGTAAAACTGTCAGATATGACAATTTTCACCACATTTGCATTCCAGC
ATCCCACTAATCCCTCCTGTAAACAATGGCTTTCACTTTCACTTTAGGGA
GGAGGAGAGAAGTGGGAAGACTTGGGTTATAAAGAAGTTAATCTCTGTAT
TGGAGGTTTCTCCTCTTCCATGACGTCATCACATGGCAAACAGTAAGTTG
GTATTGATAGTTCTATCTAACTCTGTTTTAAACGATTTACAAGCCTTTGA
CCAATGAGGAAAAACGAATGTTTGCTTTTTAAAGACAAGTCGTGAAATTT
GATTTTGTTTGCCAAAAGATTATAAAATTTTCGTTGTGACAAAATTTTGA
TGTCTTGACGAATTGTAATTTGCTTTGTCATGATCTTTCGTTCAACTTCA
TCAATACACTGCAAGATCATGGTTTCATGAATCGATACACTGCAGAATCA
CTTACCCCATACTTATTTTATTTTTCTGTTATGAAAATCTTAATCCCAAT
TTACCAAAGTCATTTTAAAAGGTAAGATATTTCTGAGAACGCAAAAATAT
CGATCATCCTTTTTACCCTCGAGATTACTACACTTTTCAACTTCCACTCT
ACAGATTTCCAAGCTCACCTTCAGCACCAGTGAGGCCGAAACAAAAATTA
TCAAGACTTCGAAGTTCATCCCAAACTGACGTCCGTGATTTAGCCATCAG
CGGACTCAGTCTAAACTCTGAAAAATTGGAACTAAACTATAAACCTGTTA
GCGAACAAAGGTTTGTTTCTTTGGAAATATTATTTTTATCTTGGAAATAT
TGTAATGTACCTTATCGGGGAAAACTTCGTCGGGGAAAAGTGACGAACTT
TTGGACAAGTGACGAATATTTTCCCCGACGAAAATTTTCCCAGGCTTTAA
TGCGATTACCAACTACCAGCAAGTGATGAATTTTTCCCCGACGCAAATTT
TCCCCGACGAAGTTTTCCCCGATTAGGTAACCTAAATTGTTTAAATTGTC
AATCCAACTAAAACCTGAACACTGTAGTTTTCCCTTCTAGTATAGAATTT
CAAATCAACTTACACGCGATCAAACTCTACATTTCCTTCTTCTTAGATCT
TCAAACGCTTCTACTGCAAGATTTCGATTACCACCGATCGGGAAAACGAG
AGGTTTAATCGGAATGTCGGGGAAACATCGGAGTAAAAGTGGGACCGGGA
ATCAAACAGAAGAACGGAAGGAAGTGGATGTAAGAAAATGAGATATTCTT
TTTCCCCATTGTTTGAAAGTGACTGACGTTTCTCCTATGCTTCGAAGAAA
AATTGTATCAATTTAGAAACCCTAGAGCATGTAATTTCTAGTAGTGTGGT
GATCCGAGTTCGATTCCCTCTTTAGTTTTAAGCTTCACTTGGTAGGTCAA
TGAAGTGTAGGTCAANTGTGGTGATCCGAGTTCGTTTCCCTCTTTAGTTT
TAAGCTTCACTTGGTAGGTCAATGAAGCTTAGGTGGGTTGCCATACCATA
TGATGGAAATTTGGTACCACTACTCACCTTATACATTTTGGTGTATATGG
CATTCATCTTATTCTACGCTCGCAACGGGCTATATGCTCTCCCGCGTTTC
GAGTGTCATCACTATGCATCATATAGTATCTGTGTCTCGCGTGCACAGAA
CCAGCGGTGTCTGGATGGCGCTATGAATTCCAACTTCAAAAAGGAGGAAT
TCCTACTTCGAAATGAGTAGGACCCGTTCTCCATCGGCATCGGGGAGGGC
TAATATGTATATTTGAAGAAATTCATAGAATTTCTATCCAAATATCTTCT
TTCAGGAGATTGAATGGCAGAGCAGCATATGCATTTCGCCCTTTTATTGG
GACTCATTAGCACTGCATACTGCATCCTGGCTAGGCAGATCGAATTTATG
CTAGGAAATTCGATAAAACTAATTGTGTCGCACACTGAAAGATATATATT
TTACAGAAATGTTCTTAACCATCTTGTCTTTTTTCAGTTCACCTTATACT
CATCACCTCTCAACTCAAGGACGGAAAATCTGCGTTGAGAGAATTTTTAG
AATGATCAGAGGTGGAGTGGATATCATTTTTTGAGAGAAGTTCTGAATCT
TCATTCGAATACCGATAGATCCCATCGAAGAGCTTTGGTTGAACATTATA
CAGTGCATTGTATCGCAATGAAGTTTTTTCTTGGAAAGAATTAAACCAAA
TATCTTTTTAGAAGTTATAATTATTTTTTAAAACCAAATGTACATATATT
GAATACGAAATTTATTTTTTACATTATTTAAGTTTATATATAAACAATTT
CGTGTGTGCGTCAATGAAAAGATAGTAAATAAATCATTAATATATCGTTT
TCTTCCCCAAATATCTCCTCCAGTTATTGACGAATTATTTTGACTGCAGG
GGGTGGTGTAGCGTGGGCTTCGATCTCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044125XLOC_044125Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071006-exon-scaffold_58-1575043694:951260..951501TCONS_00071006-exon-scaffold_58-1575043694:951260..951501Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1575043694:951073..951149TCONS_00071006-exon-scaffold_58-1575043694:951073..951149Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1575043694:950854..950894TCONS_00071006-exon-scaffold_58-1575043694:950854..950894Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1575043694:950424..950625TCONS_00071006-exon-scaffold_58-1575043694:950424..950625Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1575043694:948611..948734TCONS_00071006-exon-scaffold_58-1575043694:948611..948734Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1575043694:948386..948510TCONS_00071006-exon-scaffold_58-1575043694:948386..948510Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1575043694:945991..946072TCONS_00071006-exon-scaffold_58-1575043694:945991..946072Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1575043694:945660..945754TCONS_00071006-exon-scaffold_58-1575043694:945660..945754Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1575043694:945092..945247TCONS_00071006-exon-scaffold_58-1575043694:945092..945247Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1575043694:944623..944755TCONS_00071006-exon-scaffold_58-1575043694:944623..944755Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1575043694:943423..943864TCONS_00071006-exon-scaffold_58-1575043694:943423..943864Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1510915933:951260..951501TCONS_00071006-exon-scaffold_58-1510915933:951260..951501Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1510915933:951073..951149TCONS_00071006-exon-scaffold_58-1510915933:951073..951149Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1510915933:950854..950894TCONS_00071006-exon-scaffold_58-1510915933:950854..950894Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1510915933:950424..950625TCONS_00071006-exon-scaffold_58-1510915933:950424..950625Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1510915933:948611..948734TCONS_00071006-exon-scaffold_58-1510915933:948611..948734Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1510915933:948386..948510TCONS_00071006-exon-scaffold_58-1510915933:948386..948510Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1510915933:945991..946072TCONS_00071006-exon-scaffold_58-1510915933:945991..946072Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1510915933:945660..945754TCONS_00071006-exon-scaffold_58-1510915933:945660..945754Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1510915933:945092..945247TCONS_00071006-exon-scaffold_58-1510915933:945092..945247Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1510915933:944623..944755TCONS_00071006-exon-scaffold_58-1510915933:944623..944755Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1510915933:943423..943864TCONS_00071006-exon-scaffold_58-1510915933:943423..943864Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1491911889:951260..951501TCONS_00071006-exon-scaffold_58-1491911889:951260..951501Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1491911889:951073..951149TCONS_00071006-exon-scaffold_58-1491911889:951073..951149Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1491911889:950854..950894TCONS_00071006-exon-scaffold_58-1491911889:950854..950894Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1491911889:950424..950625TCONS_00071006-exon-scaffold_58-1491911889:950424..950625Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1491911889:948611..948734TCONS_00071006-exon-scaffold_58-1491911889:948611..948734Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1491911889:948386..948510TCONS_00071006-exon-scaffold_58-1491911889:948386..948510Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1491911889:945991..946072TCONS_00071006-exon-scaffold_58-1491911889:945991..946072Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1491911889:945660..945754TCONS_00071006-exon-scaffold_58-1491911889:945660..945754Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1491911889:945092..945247TCONS_00071006-exon-scaffold_58-1491911889:945092..945247Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1491911889:944623..944755TCONS_00071006-exon-scaffold_58-1491911889:944623..944755Clytia hemisphaericaexon
TCONS_00071006-exon-scaffold_58-1491911889:943423..943864TCONS_00071006-exon-scaffold_58-1491911889:943423..943864Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:943423..951501 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.4297	11.0419	5.60513	4.044	37.9693	30.1399	23.7387	23.4176	17.2264	19.0045	13.82	10.4054	9.4041	10.4208	6.9573	7.43118	8.40585	8.45447	7.13346	6.83343	7.34644	8.91627	9.57007	9.15265	18.1396	18.299	13.417	11.6387	7.91234	7.55373
Blast
[Close]
BLAST of TCONS_00071006 vs. Swiss-Prot (Human)
Match: ZSWM2 (E3 ubiquitin-protein ligase ZSWIM2 OS=Homo sapiens GN=ZSWIM2 PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 1.464e-52
Identity = 109/262 (41.60%), Postives = 153/262 (58.40%), Query Frame = 3 
Query:  165 ARLYLLRQTGPTGFLLKEHDGE-TKFKVLLGAVHSCDCNFFLKERELCKHILWILIRKFRIQKEDPIAFQLGLCERELNHVLYGQKQVENKQP-TKAASAGARE--MLKQKKIEKEDVCPICQDEIYKTKKSLTYCKFGCGNSVHVSCIKIWADHQHKSNNEEVIKCPLCRTEFASYKSILQEHRRS----VTRSQMRKNSLLSI-CVGCKQRAPSTSSTQSVYKCNTCNSF-LCQSCFHPNKHYGHQVKTKHGGGEKWEDL 920
            + +YLLR+ GPTGFLL+E + E   F+V LG  H C+C+ F K  ELCKHI W+L++KF++ +    A QLGL ERE++ +L G  +V+  QP T   +    E   +KQK+I+ ED+C ICQ+ + + K  +T+C+FGCGNS+H+ C+KI A++Q  SN   ++KCPLCR EFA  K IL+E + S        + R +  L I C  CKQ           YKC  C  + LCQ CF    H  H    +    +KW  L
Sbjct:   29 SSIYLLREMGPTGFLLREEEPEYMDFRVFLGNPHVCNCSTFPKGGELCKHICWVLLKKFKLPRNHESALQLGLGEREISDLLRGIHRVQTPQPGTNDENEHVEEDGYIKQKEIDSEDICSICQELLLEKKLPVTFCRFGCGNSIHIKCMKILANYQSTSNT-SMLKCPLCRKEFAPLKLILEEFKNSSKLVAAAEKERLDKHLGIPCNNCKQ----FPIEGKCYKCTECIEYHLCQECFDSCCHLSHTFTFREKRNQKWRSL 285
The following BLAST results are available for this feature:
BLAST of TCONS_00071006 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZSWM21.464e-5241.60E3 ubiquitin-protein ligase ZSWIM2 OS=Homo sapiens... [more]
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