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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070972 ID=TCONS_00070972|Name=TCONS_00070972|organism=Clytia hemisphaerica|type=transcript|length=596bp
CTGCATTTATCCTATCACAActttttttgcagattttgttttgggtaaaa
tttgttttgaaggTGGGCAGCATTTGCTTGGAGCGTAATTTGGACATTCA
CATTTGCATTTCAAGAAATTATCACATTGATATCCATCAGGACAAAGTTT
GTGACCGAAAATTGGAATTCTACATGGTCGGCGTGTTGGTGGAATGGAGT
TTCCATTGATCATCTTGTTGGCTGAAGTGTTGTTGAGTTTTGGCGATGAG
GTGTTTTTGAGAAgattgaaactgattttcttcaAAGATTTGGTTTTGGG
CAAACTTTGTTTCGAAGGTGGGCAGCATTTACTTGGAGCGTAATTTGGAC
ATTCACATTTGCATTTCAAGAAATTATCACATTTATATCCATCAGGACAA
AGTTTGTGACCAAAAATTGGAATTCTACATGGTCGGCGTGTTGGTGGAAT
GGAGTTTCCATTGATCTTCTGGTTGACTGAAGTGCTGTCGAGTTTTGGCG
ATGAGGTGTTTTTGAGAAgattgaaactgattttcttcaAAGGTTtggtt
tttggcaaaatttgttTCGAAGGTGGGCAGCATTTGCTTGGAGCAT Run BLAST on NCBI transcript from alignment at scaffold_58:590546..591396- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070972 ID=TCONS_00070972|Name=TCONS_00070972|organism=Clytia hemisphaerica|type=transcript|length=851bp|location=Sequence derived from alignment at scaffold_58:590546..591396- (Clytia hemisphaerica)
CTGCATTTATCCTATCACAACTTTTTTTGCAGATTTTGTTTTGGGTAAAA
TTTGTTTTGAAGGTGGGCAGCATTTGCTTGGAGCGTAATTTGGACATTCA
CATTTGCATTTCAAGAAATTATCACATTGATATCCATCAGGACAAAGTTT
GTGACCGAAAATTGGAATTCTACATGGTCGGCGTGTTGGTGGAATGGAGT
TTCCATTGATCATCTTGTTGGCTGAAGTGTTGTTGAGTTTTGGCGATGAG
GTGTTTTTGAGAAGATTGAAACTGATTTTCTTCAAAGATTTGGTTTTGGG
CAAACTTTGTTTCGAAGGTGGGCAGCATTTACTTGGAGCGTAATTTGGAC
ATTCACATTTGCATTTCAAGAAATTATCACATTTATATCCATCAGGACAA
AGTTTGTGACCAAAAATTGGAATTCTACATGGTCGGCGTGTTGGTGGAAT
GGAGTTTCCATTGATCTTCTGGTTGACTGAAGTGCTGTCGAGTTTTGGCG
ATGAGGTGTTTTTGAGAAGATTGAAACTGATTTTCTTCAAAGGTTTGGTT
TTTGGCAAAATTTGTTTCGAAGGTAGGCAGCATTTACTTGGAGCATAATC
TGGACATTCACATTTGCATTTCAAGAAATTATCACATTTATATCCATCAG
GACAAAGTTTGTGGCCGAAAATTGGAATTCTACATGGTCGGCGTGTTGGT
GGAATGGAGTTTCCATTGATCTTATGGTTGACTGAAGTGCTGTCGAGTTT
TAGCGATGAGGTGTTTTTGAGAAGATTGAAACTGATTTTCTTCAAAGGCT
TGGTTTTTGGCAAAATTTGTTTCGAAGGTGGGCAGCATTTGCTTGGAGCA
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070972-exon-scaffold_58-1575043694:590825..591396 | TCONS_00070972-exon-scaffold_58-1575043694:590825..591396 | Clytia hemisphaerica | exon |
| TCONS_00070972-exon-scaffold_58-1575043694:590546..590569 | TCONS_00070972-exon-scaffold_58-1575043694:590546..590569 | Clytia hemisphaerica | exon |
| TCONS_00070972-exon-scaffold_58-1510915933:590825..591396 | TCONS_00070972-exon-scaffold_58-1510915933:590825..591396 | Clytia hemisphaerica | exon |
| TCONS_00070972-exon-scaffold_58-1510915933:590546..590569 | TCONS_00070972-exon-scaffold_58-1510915933:590546..590569 | Clytia hemisphaerica | exon |
| TCONS_00070972-exon-scaffold_58-1491911889:590825..591396 | TCONS_00070972-exon-scaffold_58-1491911889:590825..591396 | Clytia hemisphaerica | exon |
| TCONS_00070972-exon-scaffold_58-1491911889:590546..590569 | TCONS_00070972-exon-scaffold_58-1491911889:590546..590569 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:590546..591396 - |
Blast
The following BLAST results are available for this feature:
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