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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070945 ID=TCONS_00070945|Name=TCONS_00070945|organism=Clytia hemisphaerica|type=transcript|length=483bp
ATCACGGAGTCAATTTCCAGAGAAGTGTACGTCCCTTGTCGAAAAGATGA
CGTTGATGCAATAGCAATGACGTTGCAAGATCTGGAAACGAAAGAAATTC
AAGACCCATGTCTATCTTATACTGATGTCAAATTGTGTTTGGAGACCTTT
CAATGCTCTGTGACGCAAGCTGACTTGttgaaatttcaagaatatcAGAA
TAATTTCAGGTGAAAAACAACATTATCTATCCAATCCTCTGTatatgttt
ttgcttttgtaTCGTGTAGGTAGTATAGTTTTTTATCAACCAAGAATAga
tatatttttaatatttcgagttatttttttaaagcgttcaaatatttttg
aaaattaaatttggagTTCAAAGCAATTGTTATTACTAAGTTTTTCCTGC
TGTGCTTAAAGTCTGTTAAGTTATTTTTAGTTAACAATTTATGACGTCAA
CTCTGTCCTAGCAGGGGGATATGGTGGCCTCGC Run BLAST on NCBI transcript from alignment at scaffold_58:307148..310262- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070945 ID=TCONS_00070945|Name=TCONS_00070945|organism=Clytia hemisphaerica|type=transcript|length=3115bp|location=Sequence derived from alignment at scaffold_58:307148..310262- (Clytia hemisphaerica)
ATCACGGAGTCAATTTCCAGAGAAGTGTACGTCCCTTGTCGAAAAGGTTG
AATGATTTATTTGTTTTTTTATTTCAATAAAAGTTCAACTATTTTTCTAT
TGGATCAGCATCCAATCCTCTTTAAGTTGAACCATACACTCTATTTTACT
AATTCCTGTTTTTATAATACTTTAATGGGGATAAAATTTCGCGGGGATTA
AATTTCACGGTTGGGCCTATCCACGAAATTTAAAAATTTCACGGGGACTT
AATTTCTCGGGTGGTACTATTGGGTGGCAATACTTTCACGATTTTGTATC
TTTATACTGTCAAATCATGCATATTGGTTGTTGAAATACACATTATTTGC
GCTTTTTTGATACAAGTAACCGTTCAAAAAGTATTTAATTGACATATTTT
GAGTTTTTGATTAGAAATATTTCGCAGATCAGACCCTTCNCGTTCAAAAA
GTATTTAATTGACATATTTTGAGTTTTGATTAGAAATATTTCACGGATGA
GGCCCTTCCAAATTTCCATTGGGATTTAATTTCGCGGATTTTCGTGGATG
ACACCCAAATCCTCGAAATTTAATCACCGCGAAAGTTTATCCCATTAAAG
TAGTATATCTAGATGATATTCAACTTGACGTTTACTTTTTCCTCTAGATG
ACGTTGATGCAATAGCAATGACGTTGCAAGATCTGGAAACGAAAGAAATT
CAAGACCCATGTCTATCTTATGTAAGTGTCCAGGGTCATTAAATTTGTAA
TACTTTAAGGGCAGAAACTTTCGCGTTTTTCGCGTTTTTGGCATTTTTTC
GCGAAAGTTTCTGCCAGGTAAGAAATTAAACAAGAAATTCGCGAAAGTTA
ATTTCGCGATAAATAAAACTTTCCTAAAAATTGCGAAAGTTTTTTCCAAG
TTTTAAAAGCCGAGGAGAGTCGATATTATCGATGTTATTGTAGTAACTAG
GATTCGGAATGGGAGGAAGAAGTGCAAATAGTTTATTTTTCATTTATTAG
CACGTAACTTTTCGATTGAAGAAAAAAAATGAGATTTGAAATAATTTTTG
ATTCACTTTCCCTAGCCACTCGCGATAGTTATTGCTACTAAAATTGAACA
TTCACAAAAAACCGCGCAAGTTTTTTCCGTAAATTTTATTCAAAAAGTAA
AAATCGCGAAACTTGAATCCGCGAAATTTCGCGACTTTACGGTCTCGCGA
AAGTTTCTGCCCTTAAAGTATCTAAGGTTCGATTATCGTCTACGATTCTT
ATGGGTTTCTTATAGACGGGTGACTTTTTAAGAATATTTATCATTACCAT
TCATTAGTTTTGATTAACTGATTTTAATAATAATAATAATAATAATGCTA
TACAAGTTCGCAGGCCACCGTGCGAGCACATGGGCCTCTATGAACCGCTC
TTTGTTCGGTTTACAATTTTCTTAAGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGACTCCTCTGAATCTT
CAGTGGATTCGTCAACACCATGAAGAATTAGATTGCACGCCGTGGATTGA
ATCTGTCGTTCCTCCTGTTTTTCCCTTCGAAGTACATTTTCTATGTTTTT
CTCGATTTGCCTCGACGCGACTGCTGCGTAGCTTTGTGATCTATTTTCTC
CTTTCTTCTCAATGATGTTTTCCATCTTCTTTTCGATCGTTGCCATTCTG
GTCTCAAAGCTATCCTTTATTTCGCTGATCATTGTATTAACGTCTTTGGA
CTTTAGTTGAGNAGTGAATTTTAAAAGTCACCGTACTTTTTTTCAAGTTT
TGTGAAGGAGGTGAAAGGTTAGCATGGGTCTAGACTTTGAAATACGTGAC
AGCTTTCGTGAAACGCAACCGCGTGTATCTAGTTCGAAAGAAGATAAGAT
TTTAGGACCTTTTTGAGAGGGGACCAATTTTTATGGCCAAAAAACTAGCA
TTACAGGCAAAACTCCCAACCCTAAAAATGTGTAAGAAATTGACGACTAT
ACTATCTTAAATATAGAGCATACTTTGAGTATACTACAAAAGTTAACTCA
TATTTTATACTTCAGATGGATCTTTTAACTATTCCATCTTCAAGAAAACT
GATGCCTAAATCTTTTAAAATTAAAATCCTTGAAAGTTTTAGTGAGTATA
TTTCAATTGATACAGAGATATTCAATAATGTTTCATTTTATCTTTTTGGT
AGACTGATGTCAAATTGTGTTTGGAGACCTTTCAATGCTCTGTGACGCAA
GCTGACTTGTTGAAATTTCAAGAATATCAGAATAATTTCAGGTGAAAAAC
AACATTATCTATCCAATCCTCTGTATATGTTTTTGCTTTTGTATCGTGTA
GGTAGTATAGTTTTTTATCAACCAAGAATAGATATATTTTTAATATTTCG
AGTTATTTTTTTAAAGCGTTCAAATATTTTTGAAAATTAAATTTGGAGTT
CAAAGCAATTGTTATTACTAAGTTTTTCCTGCTGTGCTTAAAGTCTGTTA
AGTTATTTTTAGTTAACAATTTATGACGTCAACTCTGTCCTAGCAGGGGG
ATATGGTGGCCTCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070945-exon-scaffold_58-1575043694:310217..310262 | TCONS_00070945-exon-scaffold_58-1575043694:310217..310262 | Clytia hemisphaerica | exon |
| TCONS_00070945-exon-scaffold_58-1575043694:309542..309615 | TCONS_00070945-exon-scaffold_58-1575043694:309542..309615 | Clytia hemisphaerica | exon |
| TCONS_00070945-exon-scaffold_58-1575043694:307148..307510 | TCONS_00070945-exon-scaffold_58-1575043694:307148..307510 | Clytia hemisphaerica | exon |
| TCONS_00070945-exon-scaffold_58-1510915933:310217..310262 | TCONS_00070945-exon-scaffold_58-1510915933:310217..310262 | Clytia hemisphaerica | exon |
| TCONS_00070945-exon-scaffold_58-1510915933:309542..309615 | TCONS_00070945-exon-scaffold_58-1510915933:309542..309615 | Clytia hemisphaerica | exon |
| TCONS_00070945-exon-scaffold_58-1510915933:307148..307510 | TCONS_00070945-exon-scaffold_58-1510915933:307148..307510 | Clytia hemisphaerica | exon |
| TCONS_00070945-exon-scaffold_58-1491911889:310217..310262 | TCONS_00070945-exon-scaffold_58-1491911889:310217..310262 | Clytia hemisphaerica | exon |
| TCONS_00070945-exon-scaffold_58-1491911889:309542..309615 | TCONS_00070945-exon-scaffold_58-1491911889:309542..309615 | Clytia hemisphaerica | exon |
| TCONS_00070945-exon-scaffold_58-1491911889:307148..307510 | TCONS_00070945-exon-scaffold_58-1491911889:307148..307510 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:307148..310262 - |
Blast
The following BLAST results are available for this feature:
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