TCONS_00070838 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070838
Unique NameTCONS_00070838
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3005

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070838 ID=TCONS_00070838|Name=TCONS_00070838|organism=Clytia hemisphaerica|type=transcript|length=3005bp
CGCCCCGAAAAAACCGTTCCCCTCTCTTCACCCATTACGTCATGTAAAAG
gtaccattttggaaaagtCGATAGTGATTATTTACTTCGCGAACGAGCGA
GGAATGTAATAATTGATcaacaaaaaaatcatcaaggAAAGGCGTTTGTG
TTATGGGGctgaactttttttgaaaaaagtagtatttttatcatcatttt
tGAACAGAAAGcaaCATCGATTACGATTCGTTTCTCCTTGAAATGGAGCA
ATCTTATGTGAAATTGAAGATCgccgaaaaagaagaaaaattacgcAGAG
AcagagaaaagaaaacaatgaaGCCAGTCAACGGGACCGCTCAAAAAGAT
GGGAAATATTTCCTTGTCAGATTAGAAATGGAGGTAGAAAAAATCAACAG
CCTAATAAACTCAACTGAGAAAGATTCGAGGCTGGCACAGCTTCCTGATG
AAGCATCTGGTAAAATTCGGAATGCCGTTGGAAAAGCACATTTACTACTC
AACAAACGATTCAAACAGTTCCGAGAATTATGCAGGGATAATATTGAAAA
TGACCCTGACAAGAAAGAAACGAAGTCTTCAGACCTTCAAGGTTATTGGG
ACATGATGTATATACAAATCGAAGATGTTCACGCGCTCTTCAACGATATC
GACAAATTGCGCGCCAACAATTGGCTTGTTACGGAAGATGCAACGGACGG
ATATCTCAAACCTCAGGATGACACGAAGAAAGGAAGCTCCTCTACCCCAA
AAGGCAAACGCAAATCCACCGGAAAATCACCGAGGACAAAAACAAAGACG
ATAGATGACGAAAAAGTCAAACGAGAGGCGCGCTCTAGGTTAGTGGCCGC
GCGGAAACAAGCCAAATTACGCGCACAGCAAGAAGCGACCGCTAGCAATG
GAGGTTCACCGGATGACGGTTCACCAGATGAAGGTTCACCGGATTCGTCT
ATAAACGGCTCACTGAATGGATCATGGACAGctgataaaaatgaagaagc
agCAAATTCTTCTTTGAACACTTCTCTTAATTCTTCCTCCAATTCTTCTT
CCGTGGAACTTTTGAGTAATGGAGTTGATTCGCTTGACATCGCTGCTGAG
TCGAGGCCTGTTCTAAAGCCTAACATTGAGGTCAATAGCGTTGCATAGCC
ATATTGTTTTGACTCAAACCCTGTTGTTGACGTAATTATGAAATGATGAC
CCATattgtttatttaattttgatAGTCCCTCACATAAAAAAATTGCATT
Caaattaaaaggaaaaattttttaatattattttcggtgttttttttttt
taataaagttttttCGTTGTTTTATGTTTACCTCACATACATAACGTTAT
TTTAATGAATCTCAGTATTTTTTAAATTACTATTATTATTGTTAGTATTT
TAAGCAATTATCGGACGGTGTCGGACAAAGGTACAGTAGAATGGACCTTT
GACTTCGTTTGAGTAAGGTATCGCAATGGTTGGCTTCCATACTACCTCGT
ATCATTAGTAATTCTTTGATTAACTTGACTGATGAGTTATCAATCGATTG
CTCCGGTATGGATGAgctatttccaaattttggacATCGACATTTTCAGC
CTTTAACCTTGTCACAAAATATTCTTCTTGTTAGCATCTTGggcttttgt
ttacttttttccagattgtttttctgtttgaccagtttgacttttcactt
ttctcTTGAGTATCCCGTCAAAGATTTGCCCACAAACTTAAACAGTCTGt
tatttaaagaatattttgggacgcaattttttaagtttggtcaagatatt
ttcattgtttttacttCTCTATGTCTTATTGTTAATCTTTATTGTATATA
CCTTTTTATTACAATGATGTTTTAAGTTTTTATACAAGTCTAATCATCct
ctattttttgttttgttgatgtGAATCTGTCGTGAAGGATGCGTTTTCGA
GAGAAGCGGAATCTCGGTTTGCATTTTGAAAAGCTTGAACcacaaagatt
tttctttttgacatgCAGTGtgtaaattgaaagaaatttagTAAACTTTC
CTAAtctaaaaaccatttttttgaaGCGACATAAGATTTAcgacattttt
ttatatatcatgTTCTCTGTGTATAGTCTGGAATTGTTGATACCGTCAAA
TAAANGGTTGGCTTCCATACTACCTCGTATCATTAGTAATTCTTTGATTA
ACTTGACTGATGAGTTATCAATCGATTGCTCCGGTATGGATGAgctattt
ccaaattttggacATCGACATTTTCAGCCTTTAACCTTGTCACAAAATAT
TCTTCTTGTTAGTATCTTGGGCTtttgggtcaagctggagtttttacaag
ttctttgactCTGTTGGTcattaaatgttgagacaaacgattttattact
ttctaaagaacgtgtcactcctattgtttaaaaataaccaatcagttaag
catcttgtaaaaactccagcccatcccgggcttttgtttacttttttcca
gattgtttttctgtttgacttttcacttttctcTTGAGTATCCCATCAAA
GAGTTGCCCAGAAAAACAAACTTAAACagtctcttatttaaaaaaatata
ttttgggacgcaatttttgaagtttggtcaagatattttcattgttttta
ccTCTATGTTTTATTGTTGATCTTTATTGTATATACCTTTTTATTACAAT
GATGTTTTAAGTTTTTATACAAGTCTAATTTCTCTATTTTTCGTTTTGTT
GATGTAAATCTGTCGTGAAGGATGTGTTTTCGAGAGAGGCGGAATCTCAG
TTTGCATTATGAAAAGCTTGAACcacaaagatttttctttttgacatgCA
CTGTAAATTGAAACAAATTTAGTAAACTTTCCTAAtctaaaaaccatttt
tttgaaaCGACATAAGATTTAcgacatttttttatatatcatgTTCTCTG
TGTATAGTCTGGAATTGTTGATACcgtcaaataaaataaagaaaatttca
atcaa
Run BLAST on NCBI

transcript from alignment at scaffold_58:813229..826752+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070838 ID=TCONS_00070838|Name=TCONS_00070838|organism=Clytia hemisphaerica|type=transcript|length=13524bp|location=Sequence derived from alignment at scaffold_58:813229..826752+ (Clytia hemisphaerica)
CGCCCCGAAAAAACCGTTCCCCTCTCTTCACCCATTACGTCATGTAAAAG
gtaccattttggaaaagtCGATAGTGATTATTTACTTCGCGAACGAGCGA
GGAATGTAATAATTGATcaacaaaaaaatcatcaaggAAAGGCGTTTGTG
TTATGGGGctgaactttttttgaaaaaagtagtatttttatcatcatttt
tGAACAGAAAGGTATTGATTATTAACTTTTAATCGTGACTTTGTGTTTTG
CTCGTCATGTTAGATACTACAGCTGATTTCAAATCCAGTATTTTTACTAT
AGAAGTGCTAAAAAGTTTGATTTAGTAGGTGTGAATTTTCAGTGTATTTT
TATATGCTTTTTTCTGGGCATTAGATTTATGTTTTAGCTAAGAGAGCCTT
AgtattcaaaacaaacttttcacTGTATGCAAGTAGAATTTTGTACTTGA
AAAAGTCCTGAaaagattgtgaatgttttcttcccaccacgctgaagctc
taagggatgggtgaaaacatacaatctgacaaATATGCAATCTCTAAATT
GTAaagaccgcgttcgtctaaaacaCTGACTGGGAGGAATGACAAcaaaa
gttgcgtgattgtatttatgaatagaccttttttcaaagaggccaccctg
ttgaataattgtgtagtccagcagaaaaacaatgataaaaccatgcctaa
ttattacaatatgcatgatacagtaattagcatggctctatcattgtttt
tatggctggagtacataattattgcacaggacgtcctctttgaaaaaagg
ttctatagggcgccgtatcagtttttgactttctggcgtacaacaagatt
cttgttgtaaaattttctgtGAGGGACTATTTTCcccagatgtataattt
tcaagcgcctttagaggtttaccgtgtgcgtaagaaaattatgaacagct
atCAGATTAAAGTTTagacgacccacggcatggcctgAACATGTTCCGGC
CTGTTCGGACCAAGAATCTTGtagtgcgccagaaagtcaaaaactgatac
ggcgccatattcataaacacaaaaaagtattattgaatcagCCCGAACTG
atttttatttacctttcctggtttatcatcatccattgttaaatattttc
attagacaaattcaaagttccaaataccgtgagtggtcccaaatctgaca
gccctgcctaaatccgatggggattaaataaaagatgaagatacaaaata
aaataaaaacaaacctttcgctgtgatgCAATGacgataccaaagtgtca
actaaactgagaaatttgatacactgaaccaattgaaccaaataacaata
attgcttctcatacaaaacataattcttattacaaaattgttaacgtttt
aaacacaaaTAAAAGATTCAGAATAATTAGAGgtaattaaattattttta
caactcacacttctttgatcacattaattgacatcttggcATTATAGTAA
TCTTGTTAAGTGTTTCATTTCAAGagctcttgcaatagtttattgttcaa
cttggagagggaatgtttgtaaacatataattttttttcatagcagttat
ttggggggtcggatttaggcagggctgtcagatttaggaccactcacggt
accagttcgattcacaaagttgtacaaaaaacgatccagaaaaattctgc
tttgaataggagaagaccatgagaaaagggaacggtataaaaaataaaaa
gaagaccatattatgtaagattcaaatcattctttttaataattttccta
acttaattggaaaatagatatgattaacttttatatttgaacaatatacc
gggtgcgccacaaaaaagtttctctctttgaaactaattttttcgaaatc
taaaaattttaaaagaaccattcccatttcattgaaaaaaagaaagataa
acttaaattttgatgggtcacttattaaattcgatttattagatcaaaag
ttatgctcaattgaatgaaaaagttactttcagaaagtgctcgaaatcgt
taaaaatcgacctatcaaatttttattttaaaattggcaatcacaatagc
ctttacatgattaagaggatttttcattaactaaacacataaattttgaa
actgaagggtcgagagggtttaaaatctttaagaaaatcactttaattta
cttttaccgaaattttcctcatatttttggttctagactggataaagtct
atgtaaggctggatgtacctcgaaacccgTATTTGANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGAAACccgtatttgatgtattttc
aNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNagaattttaccagattttttggccttttt
cgatgaattttcttcatttcattgaaattcaaccttcctttatataacaa
aaggtcatttagacagctaattatcatctttaatgactgaaacgaaaata
ctgatttATCATGTAATGATGCTTCTGTTTGacttgataggtcgattttt
aacgtttttcaacacctttcgaaagtaacttttctattcaattgaacata
acttttgatttactgaatcgaatttaataaatgatccatcaaaatttaag
tctaattttcttctttccaatgaaatagaaatggttcttttaaaattttt
agatttcgagaaaattagttttaaagagagaaacttttttgtggcgcacc
cggtatatttgaataaagatgaagatttttaaatttgtttgctaaaataa
ggaatttaaaatataaatattgggtcctgaaattacacgcgcaatcgtag
caagtttttgaaaatctggcccgaacatggtccgaaactgcgcATGCCCG
cgcgggccatttttaaaaagtattaatcaagaggcccgaacatgttcggg
ccatgccgtgggtcgtaaGTTTAGTGGCTAGGACTTGGTTCGAAAATTTT
CAGAGTATGTTCAGGCTATACTGTAGggtccatgcataaagtatgctgat
tattattcataataattatcataaaacttaaattatataacataattcta
aaacaatggcttAATCTTTTCTTNTGATTATTATTCATAATAATtgtcat
aaaacttaaattatataacataattctaaaacaatggcttAATCTTTTCT
TGCTTAttgtttaccacggtaaatttatgcaacaaaaaagaaataagtaa
gCAATGGAATGTTTTAgtggcacttcggtcacgtgaaTAAAAACACGCGT
ATaatgttgaacccgactgtggACTGGCCGAAAATGCAATTACGTAAATT
ATTGTGAAAGTGAACGCTTCAAGACGAAtatttgggaaatcaaaaagaca
acttttgtgagcatgttgagttttgtttatatggcactTTATGATGGACT
gattatgagaaagaattttctttcagaaaacaattccGCTATAatgattc
aagttatgaaaaagaatGAGAGAatacagaaggtgaatgcacgtggtTTT
CACTTTCTTATAATCTTtaatttaaattgaaaagagaaaggtatcattat
tattattattattatgatgtATACAAGCTCACAGGCCCGAGGTGGACCTC
TACGAACCGATTTCTAATTACAATATTAATATGTCAAGTATCTTAGTTGG
TGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTAGATCAGTTTTGAACTGTTCCCAGAGCTCACATACTGTCTTTCCG
TTTGATGTCGCGATAAAGTCTTGCGTCCAATTAGCCGCTCGAAGAAAGCG
TCGTGGTATCATGGTATAATCAGGAACGCACCTGAAAGCttctttaaata
taatttgtataatcttacataaattatatatttttaaataattgagtttc
agcgaatgaaagtttataaattgcctaaatattttctCATGATTAGCATT
AACTATGCATGAATTAATATATTCTATGCACGGATtgcgaatcgtgcatc
gtatattgtaaatcgttagatcgtgcatcttaaattacaccaacccgtCT
AGAAggactatttttcaaaaatttctcctgttggcgcaaaccatggtggc
ccctccttagacactaaacCATGGCCCTACCACTTTCAAAGTGAAAATGC
CCCATCTTGATTGAActatgataaaaaatgaaattttttgatgttttact
tttttgcaccaaaatcttcaaaatgaaaatgtttattattgtaaattttt
ttttctatttaaggATTTTTTGCAGAACTTGATAATCAAACTCTTGCATT
AATATCCTGCTTTCTTCCAGAGGGTCGCAATCGATAAGTAACCAATAGAT
AATCGATTGATTAAATATTGATTACAATAGATAATGAATAGATGATTAAA
AgtctaaaaaattaattattgatTAGGATTGGAAGTGTTCATACTCATTT
CGGAACATTTCGGAGCAAGCAGAGCACGCTCTGATAGAAATAGTGGATTC
GAGACTGttttgatctgttttgctttgtaacatcttcttttttgacattt
ccaattttgacgttcacacagtGTTGCGAAACGGAACGTAGCATGTGAAC
ATGATCTAAGTCCTACGTGTTGATTTTTGGCATCTAAATTTGTCAGATAC
AATCGATAGATATTCGATAGATAAAAATCGATAATTAGCGAACGTCTgta
aaaattgtgagtatcgaTTATCTATAGATTATCAATTGTAATTGATATTT
AATCAATCGATCGACTGTGATCGATAATTCATTTTATTACAACCCGTTGA
TTTCTTCAGAGAATTGAAGGCAAGAAAAAGTCTACGCATGCCTTATGATT
ACGGTTTGAAACAAATAAATGGTCTTTTGAAGGGTGACACACACTGAAAG
GCCTTTACTATTTGAAAAGAAGGGTTGTGTgaatctcattggtggaaaat
ttgataaacagtcCGCAAAGGACCAATGTAACCACTTCTGTTTTTATTGC
AGGGATCACTTGTCAATACTTATCAGTATTGTTTTTTACTGCAAAGGGAA
AAATAAGAGAAGTGAAACTAATCTAATTTCTTATCCTGATATGGGCAGTC
CAGATCAAACttctatatcaggattagaaactaggctagtcttatcGTGT
TTCTTCACGGACTGTTGATCAAATTTTCATCAATGAGATTGCCCATTTCA
CACAATNCACGGACTGTTGATCAAATTTCCATCAATGAGATTGCCCATTT
CACACAATCCTTCTTTTGGCACCCATGGCTTCTCAGTGCCTTGCATGGCA
GGCgactgtaaaatcccacccttcataatatttgtttcaatcccaccctt
cataatatttgtttcaatccgtaaTCTTATTCAAGGCATAGGTTTTTTCA
TCTgtaattttctggcaaaagtggGAATTTAATGAGAAACTTAGGTCACT
ATAATAATAGACgtattttctatttggttgagtttcaggaggctttgagg
cctattttcacAACTATAGACACTTTCAATGAGTGCCCcatcagcacctt
ggactgttAAGCTTCAATTCCCCTCCCTCTTATTCTTAtcggcaattttt
ttttcaaaagaaattcttgcctttaaatatcaaaataaaaatgttcttta
gcCCACCTTGTCAACTTGTTCATCTCCCCTTTCTACAGAATTGTCTGTGT
ATACCAAGTCAAAGCGTTATGAAAGGTCATGTTGTTGTAATCAGCTTCCG
GACCAGTGAAAGACAAAGATATTTTCCaaatgttacaatgaaaatatatt
caagTCTCAAtacttttaccttttttctCTGCATTCAGCTGGACCCCTTC
CTTCTCAATGCTGATAAAAGATTCAATAGTTTTTTGTCTAGGGCCCCTTA
GCTTCAAAAATACTTGATGATTTACTTGCAAGCAAATGTTTTGCCACTCA
GACTTTCTGAAGAGCcatattctttaaaaacaaagcaGTTTTGGGCAATT
TTCTCAATATGAAATTTAGTTCTGGAATGGGCCATCCCTGAATAGGGAAA
TTACCACGCTTACCAGAAGTATCTAACCCTGTGCTCTCAACACGACTATA
CACGAGCTTGGTGTATAGACGACAATAATACTCAAACTACACGGGAGGAC
ATACATATTCTTTGCAGGTGTTGAACCTATGAGTATCATCACCACACCAC
ATGTAATGCCTAGCACACTCCCCATACTCTTTTATCAGAGTATTTGGTTA
AAAAATACTGAATAACTCAGTCTAAATTTTTGGTCCAAAAATTGATAATG
GGGGCTTGATTTGCAAAGGGTCAATGACTTTGGAGAGAAACTATTCATCT
CAAGTTGCCATCTTACATATTGGTTTCACTATACCTGTGGGAGATTTTGA
CACCTTTTGAAACAGTGTACTGATCTACAGACTCGCtgaatttcttgttt
ttatctGATTGTATAGAATTTATACTTCAAGGATGTTGAATTAGTAATTT
GTTTGGGTTGAGTTTTTAGAgcgtttttttttgcttgcaagTAATAAGTT
CGAAAATTATTCATAGAAAGTTCGATAAAGTAGCAATGCAAACGAAAGAC
AGAATGTTTCAAGAAAGGCAGAAGTACAAACTATCAGGTTggattataaa
gtttttaagtTCAATAGAAATTTAGTGTAAGTCGACCTTTCCTAATCTGT
TTCAAGTCAAATATCAGTTTTCGAGCTGTTTTGTTTAACCTTGCAAATTA
CTGATCAACCCTTTGTAAGAGTTTGTATCTGAATAAACGTATTTTATAAA
ctcgtttgtttttttcttttagcaaCATCGATTACGATTCGTTTCTCCTT
GAAATGGAGCAATCTTATGTGAAATTGAAGATCgccgaaaaagaagaaaa
attacgcAGAGAcagagaaaagaaaacaatgaaGCCAGTCAACGGGACCG
CTCAAAAAGATGGGAAATATTTCCTTGTCAGATTAGAAATGGAGGTAGAA
AAAATCAACAGCCTAATAAACTCAACTGAGAAAGATTCGAGGCTGGCACA
GCTTCCTGATGAAGGTTTGTaattctcttttattttttttgcaagcATCA
TTATGATTTTGTTTGATTAGTAATGACTTTTAAAACATGAGCAATCACAT
TTCATTTTATGAtgattaatattttcttttcctaAATAAACGGTTAgaga
tttttctctttttcatgtCAAACTTTCACCTCTGTGGCTCGCGAGCTTCA
CAAATCTTGCTTTTGATTTAACAAAGTTGTTAATATTTGATGAACAACGA
ACAGTGAGCTATTGGAAGTTTGAAATAACATGTAAACTTGTTTTCATTCT
CCAATAGTGATTCattcagcttttcaaaaataggTTTTGATTGATAAATA
ACCAGAATAGATTCATCATATAAATCATTTACATCCAGGTGCCCTTTTGG
TCTGCTGCTCACATTTTCGAATCAAAGCAATAGAATCTATTTTTCGATTC
ATACAGATGTTTCTATACTGACAGGTGTCTGATATTAATCACCGTTAGAA
GCATGTTGCTCTTTTAGCTTATTTGGTTTTCATTataatttcgatatttt
ttgaGGTCACTTAAAAATATTTCCAGTAAAAAATCAACCCTTCTTTCATG
CCTGTGTGAAAATTGTATTCAAGACATTTCCTTATAAAGCCTCGTCGTTG
CTAAATTGTCCGGTATGTATATTGAAATCTGCATTTCCGCTGCTTAAAAT
GGTAATTGATCCCACTATAATCAGTTACTAATTAATTCAATTTGAATCAG
GGTGATTACACTATAATTACAACAATTTATTGATCCaattagaataactt
tttatcccCCTATCGTAAAGCATGCTTTTAGTCTCATTATCGAAAAGTTA
TTTTAAGTGACCATTCTGACTCTTTTTAGCATCTGGTAAAATTCGGAATG
CCGTTGGAAAAGCACATTTACTACTCAACAAACGATTCAAACAGTTCCGA
GAATTATGCAGGGATAATATTGTAAGNCGACAGGTGTCTGATATGTAATC
ACCGTTAGAAGCATGTTGCTCTTTTAGCTTATTTGGTTTTCATTataatt
tcgatattttttaagGTCACTTAAAAATATTTCCAGTAAAAAATCAACCC
TTCTTTTATGCCTGTGTGAAAATTGTATTCAAGACATTTCCTTATAAAGC
CTCGTCGTTGCTAAATTATCCGGTATGTATATTGAAATCTGCATTTCCGC
TGCTTAAAATGGTAATTGATCCCACTATAATCAGTTACTAATTAATTCAA
TTTGAATCAGGGGGATTACACTATAATTACAACAATTTATTGATCCaatt
agaataactttttatcccCCTATCGTAAAGCATGCTTTTAGTCTCATTAT
CGAAAAGTTATTTTAAGTGACCATTCTGACTCTTTTTAGCATCTGGTAAA
ATTCGGAATGCCGTTGGAAAAGCACATTTACTACTCAACAAACGATTCAA
ACAGTTCCGAGAATTATGCAGGGATAATATTGTAAGTCTTATATAGTTCA
CGATGATTTGATTTTAGGCCTCTTTGAAAATAAGGCTCTCGGTAGTTAGG
tcatttttgaattaaggcaGAGAATTCTCTAATCTATGTATGAAACATCA
AATTCTTCAATGTCTTTTTCAGGAAAATGACCCTGACAAGAAAGAAACGA
AGTCTTCAGACCTTCAAGGTTATTGGGACATGATGTATATACAAATCGAA
GATGTTCACGCGCTCTTCAACGATATCGACAAATTGCGCGCCAACAATTG
GCTTGTTACGGAAGATGCAACGGACGGATATCTCAAACCTCAGGTGAGAA
TGAAATCTTTCTGTTTTGATTTCTTGGTTCTCATTTCTTGTTTTTTCACA
TCTAACAACAAGCAATTTCTTAGAGCTTTAGTTATTTCTTcttgtttaca
aattttcttcTCAATTGTTCTTTTAGAATTATTTAGGAAGCTTTTTTGAC
AAAGTTTACACAAGAAAACAAATGTTAAAATCTACTTAGATATGACAATC
AGCTGACAATGAAACCGAGCCCTCGTTGAACCTTTTTTCAATCTTAGATG
AAATAAACACGTTTGTGTTGTCTCAACAAACAGTTGATTCTAATCGCATT
ACTAATCACATTTTCCCGATATTATTTTATCTCAGGATGACACGAAGAAA
GGAAGCTCCTCTACCCCAAAAGGCAAACGCAAATCCACCGGAAAATCACC
GAGGACAAAAACAAAGACGATAGATGACGAAAAAGTCAAACGAGAGGCGC
GCTCTAGGTTAGTGGCCGCGCGGAAACAAGCCAAATTACGCGCACAGCAA
GAAGCGACCGCTAGCAATGGAGGTTCACCGGATGACGGTTCACCAGATGA
AGGTTCACCGGATTCGTCTATAAACGGCTCACTGAATGGATCATGGACAG
ctgataaaaatgaagaagcagCAAATTCTTCTTTGAACACTTCTCTTAAT
TCTTCCTCCAATTCTTCTTCCGTGGAACTTTTGAGTAATGGAGTTGATTC
GCTTGACATCGCTGCTGAGTCGAGGCCTGTTCTAAAGCCTAACATTGAGG
TCAATAGCGTTGCATAGCCATATTGTTTTGACTCAAACCCTGTTGTTGAC
GTAATTATGAAATGATGACCCATattgtttatttaattttgatAGTCCCT
CACATAAAAAAATTGCATTCaaattaaaaggaaaaattttttaatattat
tttcggtgttttttttttttaataaagttttttCGTTGTTTTATGTTTAC
CTCACATACATAACGTTATTTTAATGAATCTCAGTATTTTTTAAATTACT
ATTATTATTGTTAGTATTTTAAGCAATTATCGGACGGTGTCGGACAAAGG
TACAGTAGAATGGACCTTTGACTTCGTTTGAGTAAGGTATCGCAATGGTT
GGCTTCCATACTACCTCGTATCATTAGTAATTCTTTGATTAACTTGACTG
ATGAGTTATCAATCGATTGCTCCGGTATGGATGAgctatttccaaatttt
ggacATCGACATTTTCAGCCTTTAACCTTGTCACAAAATATTCTTCTTGT
TAGCATCTTGggcttttgtttacttttttccagattgtttttctgtttga
ccagtttgacttttcacttttctcTTGAGTATCCCGTCAAAGATTTGCCC
ACAAACTTAAACAGTCTGttatttaaagaatattttgggacgcaattttt
taagtttggtcaagatattttcattgtttttacttCTCTATGTCTTATTG
TTAATCTTTATTGTATATACCTTTTTATTACAATGATGTTTTAAGTTTTT
ATACAAGTCTAATCATCctctattttttgttttgttgatgtGAATCTGTC
GTGAAGGATGCGTTTTCGAGAGAAGCGGAATCTCGGTTTGCATTTTGAAA
AGCTTGAACcacaaagatttttctttttgacatgCAGTGtgtaaattgaa
agaaatttagTAAACTTTCCTAAtctaaaaaccatttttttgaaGCGACA
TAAGATTTAcgacatttttttatatatcatgTTCTCTGTGTATAGTCTGG
AATTGTTGATACCGTCAAATAAANGGTTGGCTTCCATACTACCTCGTATC
ATTAGTAATTCTTTGATTAACTTGACTGATGAGTTATCAATCGATTGCTC
CGGTATGGATGAgctatttccaaattttggacATCGACATTTTCAGCCTT
TAACCTTGTCACAAAATATTCTTCTTGTTAGTATCTTGGGCTtttgggtc
aagctggagtttttacaagttctttgactCTGTTGGTcattaaatgttga
gacaaacgattttattactttctaaagaacgtgtcactcctattgtttaa
aaataaccaatcagttaagcatcttgtaaaaactccagcccatcccgggc
ttttgtttacttttttccagattgtttttctgtttgacttttcacttttc
tcTTGAGTATCCCATCAAAGAGTTGCCCAGAAAAACAAACTTAAACagtc
tcttatttaaaaaaatatattttgggacgcaatttttgaagtttggtcaa
gatattttcattgtttttaccTCTATGTTTTATTGTTGATCTTTATTGTA
TATACCTTTTTATTACAATGATGTTTTAAGTTTTTATACAAGTCTAATTT
CTCTATTTTTCGTTTTGTTGATGTAAATCTGTCGTGAAGGATGTGTTTTC
GAGAGAGGCGGAATCTCAGTTTGCATTATGAAAAGCTTGAACcacaaaga
tttttctttttgacatgCACTGTAAATTGAAACAAATTTAGTAAACTTTC
CTAAtctaaaaaccatttttttgaaaCGACATAAGATTTAcgacattttt
ttatatatcatgTTCTCTGTGTATAGTCTGGAATTGTTGATACcgtcaaa
taaaataaagaaaatttcaatcaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044064XLOC_044064Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070838-exon-scaffold_58-1491911889:813229..813439TCONS_00070838-exon-scaffold_58-1491911889:813229..813439Clytia hemisphaericaexon
TCONS_00070838-exon-scaffold_58-1510915933:813229..813439TCONS_00070838-exon-scaffold_58-1510915933:813229..813439Clytia hemisphaericaexon
TCONS_00070838-exon-scaffold_58-1575043694:813229..813439TCONS_00070838-exon-scaffold_58-1575043694:813229..813439Clytia hemisphaericaexon
TCONS_00070838-exon-scaffold_58-1491911889:822101..822342TCONS_00070838-exon-scaffold_58-1491911889:822101..822342Clytia hemisphaericaexon
TCONS_00070838-exon-scaffold_58-1510915933:822101..822342TCONS_00070838-exon-scaffold_58-1510915933:822101..822342Clytia hemisphaericaexon
TCONS_00070838-exon-scaffold_58-1575043694:822101..822342TCONS_00070838-exon-scaffold_58-1575043694:822101..822342Clytia hemisphaericaexon
TCONS_00070838-exon-scaffold_58-1491911889:823208..823299TCONS_00070838-exon-scaffold_58-1491911889:823208..823299Clytia hemisphaericaexon
TCONS_00070838-exon-scaffold_58-1510915933:823208..823299TCONS_00070838-exon-scaffold_58-1510915933:823208..823299Clytia hemisphaericaexon
TCONS_00070838-exon-scaffold_58-1575043694:823208..823299TCONS_00070838-exon-scaffold_58-1575043694:823208..823299Clytia hemisphaericaexon
TCONS_00070838-exon-scaffold_58-1491911889:823951..824121TCONS_00070838-exon-scaffold_58-1491911889:823951..824121Clytia hemisphaericaexon
TCONS_00070838-exon-scaffold_58-1510915933:823951..824121TCONS_00070838-exon-scaffold_58-1510915933:823951..824121Clytia hemisphaericaexon
TCONS_00070838-exon-scaffold_58-1575043694:823951..824121TCONS_00070838-exon-scaffold_58-1575043694:823951..824121Clytia hemisphaericaexon
TCONS_00070838-exon-scaffold_58-1491911889:824464..826752TCONS_00070838-exon-scaffold_58-1491911889:824464..826752Clytia hemisphaericaexon
TCONS_00070838-exon-scaffold_58-1510915933:824464..826752TCONS_00070838-exon-scaffold_58-1510915933:824464..826752Clytia hemisphaericaexon
TCONS_00070838-exon-scaffold_58-1575043694:824464..826752TCONS_00070838-exon-scaffold_58-1575043694:824464..826752Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:813229..826752 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.347401	0.56374	0.523759	0.66644	5.34544	3.27389	4.04763	4.36384	1.6074	3.18055	0.124671	1.64917	4.15852	3.63964	2.76081	3.82901	0.862378	2.39896	1.03526	2.7612	2.34556	2.24322	1.98087	2.33946	0.909244	2.16712	9.78936	9.4238	9.34768	17.1127
Blast
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BLAST of TCONS_00070838 vs. Swiss-Prot (Human)
Match: DLGP1 (Disks large-associated protein 1 OS=Homo sapiens GN=DLGAP1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.452e-21
Identity = 44/112 (39.29%), Postives = 71/112 (63.39%), Query Frame = 3 
Query:  339 AQKDGKYFLVRLEMEVEKINSLINSTEKDSRLAQLPDEASGKIRNAVGKAHLLLNKRFKQFRELCRDNIENDPDKKETKSSDLQGYWDMMYIQIEDVHALFNDIDKLRANNW 674
              +DG +FL  L+ E +++       E++ R   LP++  GKIR AVG A LL+ ++F QFRELC +N+  +   + T S DL G+WDM+ + IE++   F+++ +L+ANNW
Sbjct:  789 CHRDGHWFLKLLQAERDRMEGWCQQMEREERENNLPEDILGKIRTAVGSAQLLMAQKFYQFRELCEENLNPNAHPRPT-SQDLAGFWDMLQLSIENISMKFDELHQLKANNW 899
The following BLAST results are available for this feature:
BLAST of TCONS_00070838 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DLGP14.452e-2139.29Disks large-associated protein 1 OS=Homo sapiens G... [more]
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