|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070710 ID=TCONS_00070710|Name=TCONS_00070710|organism=Clytia hemisphaerica|type=transcript|length=633bp
GTGATAGTCACGTCGAGCGCAATAGAGATAAACAGTTTAAATCGTATCAG
TTTGAAAGTGTATTCATCGCAAAAATGTCATTCGTAAATGTTCGAAATGA
CATTTCCGGCAAATATTTGTCGAAAAATCAGGAGAATCAATACAATATTG
GTTCTGCAAACAATGCACAAGACGTTGCACGTTTGCAACGAATGGTGCAA
AACCTCACAGCTGAGAACGCGAAGTTGAAACTCAATGTTCAATCGCTGAG
CTCAGATCTGTCAACGAGCAACAAAGAAGTCGACTCAATCAAGACTGAAT
TTGGCAGGCTCGTCAAGAAAGGTCTCATTCAAAAACAGAAGTCTTCTCAA
GAGAGAGATNTTCGTCAAGAAAAGTCTCATTGAAAAACAGAAATCTAATC
AACAGAGAGATTCGTTGTCTACAAAGATCGCTGATCTGAATCAAGAACTG
GCTTCTCTTCAAAACGACTTGAACATCTCCCGCGGTGAGAAAGATAATAT
CAAAGCCGAATTGGGCAAGCTCATCAAGAAAAACCTCGTTCAAAAACAGA
AGTCTTCTCAAGAGAGAGATTTGTTGTCTGCAAAGATCGCTGATCTCAAT
CAAGAATTGGTTTATGTTCAACAAAAATTGCAC Run BLAST on NCBI transcript from alignment at scaffold_57:831464..832573- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070710 ID=TCONS_00070710|Name=TCONS_00070710|organism=Clytia hemisphaerica|type=transcript|length=1110bp|location=Sequence derived from alignment at scaffold_57:831464..832573- (Clytia hemisphaerica)
GTGATAGTCACGTCGAGCGCAATAGAGATAAACAGTTTAAATCGTATCAG
TTTGAAAGTGTATTCATCGCAAAAATGTCATTCGTAAATGTTCGAAATGA
CATTTCCGGCAAATATTTGTCGAAAAATCAGGAGAATCAATACAATATTG
GTTCTGCAAACAATGCACAAGACGTTGCACGTTTGCAACGAATGGTGCAA
AACCTCACAGCTGAGAACGCGAAGTTGAAACTCAATGTTCAATCGCTGAG
CTCAGATCTGTCAACGAGCAACAAAGAAGTCGACTCAATCAAGACTGAAT
TTGGCAGGCTCGTCAAGAAAGGTCTCATTCAAAAACAGAAGTCTTCTCAA
GAGAGAGATNTTCGTCAAGAAAAGTCTCATTGAAAAACAGAAATCTAATC
AACAGAGAGATTCGTTGTCTACAAAGATCGCTGATCTGAATCAAGAACTG
GCTTCTCTTCAAAACGACTTGAACATCTCCCACGGTGAAAAAGAAAACAT
CAAAGCCGAAGTTGGAAAGCTCATCAAGAAGAGTCTCATTGAAAAACAGA
AGTCTTCTCAAGAGAGAGATTCGTTGTCTGCAAAGATTGCTGATCTCAAT
CAAGAACTGGCTTCTCTTCAAAACGACTTGAACATCTCCCGCAGTGAGAA
AGATAATATCAAAGCCGAAGTTGGAAAGCTCATCAAGAAGAGTCTCATTG
AAAAACAGAAGTCTTCTCAAGAGAGAGATTCGTTGTCTGCAAAGATTGTT
GATCTCAATCAAGAACTGGCTTCTCTTCAAAACGACTTGAACATCTCCCG
CGGTGAGAAACAAAACATCAAAGCCGAAGTTGGAAAGCTCATCAAGAAAA
GTCTCATTGAAAAACAGAAGTCTTCTCAAGAGAGAGATTCGTTGTCTGCA
AAGATTGCTGATCTCAATAAAGAACTGGCTTCTCTTCAAAACGACTTGAA
CATCTCCCGCGGTGAGAAAGATAATATCAAAGCCGAATTGGGCAAGCTCA
TCAAGAAAAACCTCGTTCAAAAACAGAAGTCTTCTCAAGAGAGAGATTTG
TTGTCTGCAAAGATCGCTGATCTCAATCAAGAATTGGTTTATGTTCAACA
AAAATTGCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070710-exon-scaffold_57-1575043694:832100..832573 | TCONS_00070710-exon-scaffold_57-1575043694:832100..832573 | Clytia hemisphaerica | exon |
| TCONS_00070710-exon-scaffold_57-1575043694:831464..831622 | TCONS_00070710-exon-scaffold_57-1575043694:831464..831622 | Clytia hemisphaerica | exon |
| TCONS_00070710-exon-scaffold_57-1510915933:832100..832573 | TCONS_00070710-exon-scaffold_57-1510915933:832100..832573 | Clytia hemisphaerica | exon |
| TCONS_00070710-exon-scaffold_57-1510915933:831464..831622 | TCONS_00070710-exon-scaffold_57-1510915933:831464..831622 | Clytia hemisphaerica | exon |
| TCONS_00070710-exon-scaffold_57-1491911889:832100..832573 | TCONS_00070710-exon-scaffold_57-1491911889:832100..832573 | Clytia hemisphaerica | exon |
| TCONS_00070710-exon-scaffold_57-1491911889:831464..831622 | TCONS_00070710-exon-scaffold_57-1491911889:831464..831622 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_57 | supercontig | scaffold_57:831464..832573 - |
Blast
The following BLAST results are available for this feature:
|
