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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070707 ID=TCONS_00070707|Name=TCONS_00070707|organism=Clytia hemisphaerica|type=transcript|length=593bp
TATATATAGGTGTTTGGTTACTGAACCTGATCGAAGACGACCCTGTCGaa
cgaaagaaatatttctatccccagACAAACAAATTGCGCTACCAGATAAG
TGAACCACGCGGCTGGATAAGTGAACGTGTTGTCACGAGTTAACGCACGA
CGGTCGACTAAGTTTGCATGAAAGCGGGCAGAATAGGGATGATGAAATTG
ACGCCCATGTGTGATCGCCCAATTGTTTAAGTACGCCTCGCAAACCACGC
GTTCAGTCCGGGCTTTATGGTTTTGCCTTCCAGCCTTCGTTCATTCACCA
TGACAAATACCATATTAACCATTAAAGTAGTTTTACACGTTGGATGTACT
GTCGCTGCTTCAAATACGCTgagtttgcacaaagatagcagttgttcaac
caatcatcaaacttcattttaacataacattttaaaaatgacaagagttt
tgacttcaaaatgttgaacaagaattggaatgaattgtctgcagttttaa
tggagctgtgcaatgtttgtgcaatgggacaccaaaacagcaaccatttt
aaccgaacctccacagaatcatcttttttgtactgtCCAAGAA Run BLAST on NCBI transcript from alignment at scaffold_57:792424..793857- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070707 ID=TCONS_00070707|Name=TCONS_00070707|organism=Clytia hemisphaerica|type=transcript|length=1434bp|location=Sequence derived from alignment at scaffold_57:792424..793857- (Clytia hemisphaerica)
TATATATAGGTGTTTGGTTACTGAACCTGATCGAAGACGACCCTGTCGAA
CGAAAGAAATATTTCTATCCCCAGACAAACAAATTGCGCTACCAGATAAG
TGAACCACGCGGCTGGATAAGTGAACGTGTTGTCACGAGTTAACGCACGA
CGGTCGACTAAGTTTGCATGAAAGCGGGCAGAATAGGGATGATGAAATTG
ACGCCCATGTGTGATCGCCCAATTGTTTAAGTACGCCTCGCAAACCACGC
GTTCAGTCCGGGGTAAGTCTCAAAAAGTAATGTTAAAATCTTCGGACACG
CAACAAGAAAATCCCTGGAGTCAGGGGAATCGGCAGGGTCGTTCGAACAT
AATTCAACTTTACCAGAATCTTTTAGTTTCGTGACTGTTCGATTTGGTTG
CGGTAATCTAACACCTATCGTTTGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTATCGTTTGATAAT
GTTAGATTAGATTGGTACCCGTGAAAAAGGGTAATTTGCATCATTTGAGG
GAAACTTTACATTGCCTCCAAACTGCAGACCTTTCTTGGTATGCACTTTG
TCTAAGCTAAAATGTAAACTAAATGCTTTTGACTTTTGAATTTTTACAAT
TTTATTACCAGAAAACTCTACTATTTGGAGGCGATACCAGTTTCCCTCCA
GTGATTACCCTTTTTCACGGTAATCAAACAGTCTGATCTGATTGACATCA
CCTGGATATTTCTATTTCTATTTGGTTGAGTTACAGGAGGCATTAGAGGC
CTATTCTCGCAACTATAGACGCTTACTAATAAGCGTCCCGTCAGCACCTT
GAACTGACTACCCAATTCCCCTCACATGGTATGGGTTGACCCGGGCGAAG
GAACGTTCACTTGCCAAGTGAACTGCCGTGAGTGGGAATCGAACCCTGGC
CTCCTGCACAGAAGCCAAGGTCGACTACCACTATACCACGGCACCACCTT
TATTTATTACAAATTATCTATTGACAGTTTCTTCTTCTCTATTCCTATTT
CAGCTTTATGGTTTTGCCTTCCAGCCTTCGTTCATTCACCATGACAAATA
CCATATTAACCATTAAAGTAGTTTTACACGTTGGATGTACTGTCGCTGCT
TCAAATACGCTGAGTTTGCACAAAGATAGCAGTTGTTCAACCAATCATCA
AACTTCATTTTAACATAACATTTTAAAAATGACAAGAGTTTTGACTTCAA
AATGTTGAACAAGAATTGGAATGAATTGTCTGCAGTTTTAATGGAGCTGT
GCAATGTTTGTGCAATGGGACACCAAAACAGCAACCATTTTAACCGAACC
TCCACAGAATCATCTTTTTTGTACTGTCCAAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070707-exon-scaffold_57-1575043694:793596..793857 | TCONS_00070707-exon-scaffold_57-1575043694:793596..793857 | Clytia hemisphaerica | exon |
| TCONS_00070707-exon-scaffold_57-1575043694:792424..792754 | TCONS_00070707-exon-scaffold_57-1575043694:792424..792754 | Clytia hemisphaerica | exon |
| TCONS_00070707-exon-scaffold_57-1510915933:793596..793857 | TCONS_00070707-exon-scaffold_57-1510915933:793596..793857 | Clytia hemisphaerica | exon |
| TCONS_00070707-exon-scaffold_57-1510915933:792424..792754 | TCONS_00070707-exon-scaffold_57-1510915933:792424..792754 | Clytia hemisphaerica | exon |
| TCONS_00070707-exon-scaffold_57-1491911889:793596..793857 | TCONS_00070707-exon-scaffold_57-1491911889:793596..793857 | Clytia hemisphaerica | exon |
| TCONS_00070707-exon-scaffold_57-1491911889:792424..792754 | TCONS_00070707-exon-scaffold_57-1491911889:792424..792754 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_57 | supercontig | scaffold_57:792424..793857 - |
Blast
The following BLAST results are available for this feature:
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