TCONS_00070682 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070682
Unique NameTCONS_00070682
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length930

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070682 ID=TCONS_00070682|Name=TCONS_00070682|organism=Clytia hemisphaerica|type=transcript|length=930bp
ttttagagATACAACTGATAAAAATACTAtagttataaaaataaaaacat
cgcCATTATGAGTGGAGGGCTCTATGGAGGAGATGAGGTTGGAGCAGTTG
TGTTTGATATCGGATCATCTTCGACCAGAGTTGGCTTCGCTGGTGAAGAT
ATCCCTAAGagTGATATTTGTTCAACTATCGGTATAATTAAAGAAAATGA
AGCTATGGATATCGACAACGAAACGACGAAACCAGCGAACCGACGTTACC
ACTTCGACCCACAACATTACCTACCCTTAGCTAACAAAGAGATGGTGAAT
TTCGTTCGAGACGGTATGATACACGATTGGGATTTGTTAGAGAAACTATT
GAATCATTGCTACAAAGACCATATACGTGATGCGGCTGACCAACATCCAG
TTCTCATGTCCGAAGCTCCTtggaacACCAAAGAGAAGCGTGAAAAACTA
ACAGAGCTAATGTTCGAGAAATACAATATTCCAGCATTTTTCTTGTGTAA
GAATGCTGTTCTTTCCTGTTTCGCTCACGGCAGATCGACATCATTGATTG
TAGACTCTGGTGCAACTCACACCAGTGCTGTTCCAGTGCATGATGGTTTT
GTACTTCAGAAAGGAGTGATCCGATCGCCATTAGCAGGTGATCTATTGAC
AGCGCAGTGTTTGGAGTTGATGGATAGTTGGAATGTGGACGTGGTGCCTG
CTTATATGGTCAAATCAAAGGAAGAAGTTGAAGAAAGCGAAGCAGCGAAA
TACATTGCAAGAGAATTACCTGAACTCACCGAATCATACAAACAGTTCAT
GAAGAGGGAGGTGATGAAAGACTTTCAGAAATCAGTCCTCCAAGTGTCAG
ATTCACCTTTCGTTCGAAATGAGTTGGACGTGGTGCCGAGCGCTTTGTAC
GAATTTCCAAACGGTTTCAACAAACCNATT
Run BLAST on NCBI

transcript from alignment at scaffold_57:440441..452346-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070682 ID=TCONS_00070682|Name=TCONS_00070682|organism=Clytia hemisphaerica|type=transcript|length=11906bp|location=Sequence derived from alignment at scaffold_57:440441..452346- (Clytia hemisphaerica)
TTTTAGAGATACAACTGATAAAAATACTATAGTTATAAAAATAAAAACAT
CGCCATTATGAGTGGAGGGCTCTATGGAGGAGGTATGCCCTGAAATTTTA
ATAATCTTTAACAGTTTTTAATACTAAGTATACATTTCTTCTTTTCACTG
TATGTTTGATCATAAGCATGTCTAGACTCAGGTATGACAAAAATTTAAAC
ATTTTGAGCCTACAAAAATATGTTCTGATTTTGCCAGTTTTTTGGCTGGG
ATTTTACGGATTTTCAGAAATTTCCCTAAAGTTTTGCCTGGGATATAAGC
ATCCTTATAAGTATTTTTCAACCTTTTCAAGCCCTCAACCTAAGCATCTC
GAAGTCTGTTTTCAAAATTTTGTATGCTTAAGAAAAACATGTATCATAAA
TTTAAGAAAGTTCACTATCACAAATAATAATTGAAATAAAGTTCTACCCG
GGGTAGTGAAAACAGCATTGCACGCTTTGGAACACAAATGAAATTCACGA
GGGATTGATAATGTCATGCTCCGACCAGCTCCGACGAGTGAAGTCTAGTT
TCCACACTCGGTGATTAATTAATTAGTTTCTGTATTGTAACTACAGTTTC
TGGTGTCTCACCTGCGCTAAAAAAGCTAATAATTCCAGTAGAAGTCTGCA
ATGAACAAATCAACCTCGTCCCTGTGTATTCCACGCTTTATTTAAGTTAC
TGATGGACGCCAGAGAATACTATCTGGCGTTATCAGTAAGCATAAAAAAG
CTGTTAATACACAGGGAACGAGGTTGAGAACAACTATGAATAATGTGATT
CGATCTTTTTCTCCTTAGATGAGGTTGGAGCAGTTGTGTTTGATATCGGA
TCATCTTCGACCAGAGTTGGCTTCGCTGGTGAAGATATCCCTAAGGTCTG
AACACTCCTTAATTAAGAAGGTTTACTTTTTAAACAAGAGTGATATCGTT
TGCTTACTTGTCAATTTTTATTTTCAAGTTTTTTTTTCACATTGAATTGA
TACGGATGTGAATTGTGAAAAAACATTTTTAGTTTATATCAGCACAATAA
AAACTTTTTTTGGTATGAAATATGTGTCTGATATGAAACGGGAACACTTA
TGTAAAAATAAAACCTGTAAAAATTACCCTAAACCGCAACGTTATCAAAA
ACATATTCCGTGCTGTTAAGCTGAATTTCTTGATAAAGATGGGGGTGTTT
ATCATTCAGAGGTTAAAACTGTTATGTTGAGTTTATGCTTGAAAATACTT
TCTGCAAAGCTGCTAAAGTCGGGTGTCATTTTTACTGGATTCCCTTTGAA
GAATATAATAATATAATCTTTTATTTTTTGCAATTTTCTTTTCTTAGAGT
GATATTTGTTCAACTATCGGTATAATTAAAGAAAATGAAGCTATGGATAT
CGACAACGGTATGAATTTGTTGGTGAAAAAGTTCTTTATGTCATAATTCA
CACATTTTATAAGAACAAACTATGTAAAAACGTAAGCTTTCGGTAGCAAA
AATATCAAGAACATTTAAGGATTTACGAACTCTAAATCGCTTGATTTCTT
TGGAAAATGGACAAATATACTCACAAAATGGTGAAAATAAGAACATGTTA
AGAACATTTTTTCATCCCCCNCTAAATCGCTCGATTTCTTAGGAAAATGG
ACAAAAATACTCACAAAATGGTGAAAATAAGAACATGTTAAGAACATTTG
TTGAAAATGAAAGGGGCAGCTTTAGATTTTGGTGATTTAAATGACACATA
AAAGAGGATCACCATTGTTTCTATAGGGTCTAAAGCGACCGTTATAAGAA
TGAATCCCTCCTCTACTCAAGTTGTCTCTACACAAACCNGATTTAAATGA
CACATAAAAGAGGATCACCATTGTTTCTATAGGGTCTAAAGCGACCGTTA
TAAGAATGAATCCCTCCTCTACTCAAGTTCTCTCTACACAAACCCAGTAT
CTACGGCTAATTTCAAAATTCATTGCTGTAGATGGTCTGTTGTCATTGTC
TTTTCTCATTTGAGGCTTTTCAAACTGACCGCTGCGATGGAGTGTTGGTG
AGAGAGGGGAGACGATGAGAGAAGTGTTGCTATTCATAAATCATACTTCA
TCGCAGAGGTCTTCGTACGGGAATAATTTTATCAAACAGACAATGTGCAC
AGAGTGATTACGAAGCGATAAACGTATACACTCTAGGGTACATAGTACTA
CTCAAGGAACGCAGGCTTAATTGTAAACATGTAGAAAGTAGGATTCTACC
AACCCTCTCACAGGGAGACTGGGAGAGAAGAGGGTAAGGTGGATGGGTGT
TAGAAAACTTAAAATGCAGGACACAAAGCCTGTTTTCCTCGGGGTTTTCC
TGCTGGTTTAAACTCCAAACTGGGTTTCCAGAGCGTCTGATCTTCGGACA
CAATGAACAGTAGATTGTTCAGAAACGCTTATTATTCAGTATATGCACAC
CTGCTGCAAAATGTCTTTTGGAATTACGTCGCTTTTACTACAGAAAATTG
ATTAGATAGCAAAAAGACTTTCTTGAAGTCATTGCAGTGGTGCATATATC
CAGATAATTCATGATATGCACCACTGCAATGACTTCACGAAATTATGCAA
CTTTTCTGGTTTTTTTTTTTTTCACCCAATACGTCACTTTTTCTATTGTT
TAAGTGACGTATTGGGCGGAAAATTTTAAAAGTTCTGAAAAGACTCTCCA
GTGGTGGCTATCATGGATTGAACCTTAATTTCGCCAATTTTTTGATCCCC
TCTTCTTTTCTGGTCTTTCAGAAACGACGAAACCAGCGAACCGACGTTAC
CACTTCGACCCACAACATTACCTACCCTTAGCTAACAAAGAGATGGTGAA
TTTCGTTCGAGACGGTATGATACACGATTGGGATTTGTTAGAGAAACTAT
TGAATCATTGCTACAAAGACCATATACGTGATGCGGCTGACCAACATCCA
GTTCTCATGTCCGAAGCTCCTGTAAGTTTGACTTTCCATCTCCACAGTCG
CTGGCGACCCGAAGGCTCCTTTTTCGATAGCTATCTATCCCAAGGTAGGA
GAGGGCGCCACTCTTTCTGGATTGCTCCACTTACCCTTGATCCTTCTCTT
TATTACTAAGCATCAAGCAGAATCGTATCAAGTACTAAAAGTACGAAGTC
TTTGGTATGACCCGGCCATGGATTGAACCCACGACCTTGCGCCATTGTAC
CGAATACTCTACCTTTGCGCTACGGTCACCTAGAGATCTAGACACTCTCC
TATCTGTAACTGGGAAGAGAAAGTTTTTTTCGGGGCATCCTAGATTTTGT
AATGGCTGAGTACCTAATGTACAGGAATAGATCTACTTTTTTCCAAAAAA
TGAAAATTGACCCCTATTAATCAGTCGGAACCACTACATAAAAATGGCAA
CTATTGCCTTAACAGGAAATATTTCCCGAACGGGAAGATGAAAAACTTCC
CGAAATGGATAGAGATTCCGATTCAGGAAGTTTCCCGATCGGGAATGTGA
CCTCTGCGTTCTCCGGAAATGCTCGTGGAAGGTAAATAACTGATGCCTAT
TGTAAAAGAGGGTGAATAAATACCTTTCACCGGGTAGTTAAGAAATCCAC
CGGGTAATCGCTTCTTAATTTTACTTNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAAATACTTCCTGTTAAGGCA
ATAGTTGCCATTTCCATGTAGTGGTTCCGACTGCCAATTGAAAGAGCACA
AAATCTTGATGAATTTTGGTACATAAAATCTTATTCAGTCATTTTTTGTT
CATGTTGTTTAAGCCCTTGATTAACTTGAAATTCTTTTTTTTTTCAGTGG
AACACCAAAGAGAAGCGTGAAAAACTAACAGAGCTAATGTTCGAGAAATA
CAATATTCCAGCATTTTTCTTGTGTAAGAATGCTGTTCTTTCCTGTTTCG
CTCACGGCAGATCGACATCATTGATTGTAGACTCTGGTGCAACTCACACC
AGTGCTGTTCCAGTGCATGATGGTTTTGTACTTCAGAAAGGTAAGTTTGC
AAGGTGCCCAGGCTGAACTCGATGCCTTACGGTGGAACGAAACTTGGAAC
AAAACTTATTCATTTTGATTTCCCAGAGTTCTTTCTCCGCGGAGAAAAGA
TGACACAAAGCTTCATGATTTAATAACTTGCTACGCTCAAAAATGATATG
GATTCTACTATACTTATTTATACAATCTGTCCCACAATTTAGTCTGACTC
TCTTTACAACCAATAAAAGTATGTCACCGACATTTAGAGGTTACGTAACT
TCTGCCATTATGAAGAAAACATTTGATTTGCGTAAACAACTGTAAACATC
CATCTCTTCAAATTTGAATATTTTTTCCATAAATAAGAGGCTTTTGTTGG
GCTACATATCTTTGCCAAAGTCTGAAAGACACCTCTATACAGTTGTGAAA
AACTTTCTTTTGATCTTTAGGAGTGATCCGATCGCCATTAGCAGGTGATC
TATTGACAGCGCAGTGTTTGGAGTTGATGGATAGTTGGAATGTGGACGTG
GTGCCTGCTTATATGGTCAAATCAAAGGTATGGATTACAACCATTACATA
GTTTTCATCCCTGGCTCTTTTTAAAAGGGGGAATACCAACATTTCACTTT
GGGGGCCCTTATATAGGGGGGGGGGTACCAAGATTTGCCAAAAAATGTGC
ATGGCATGGACCAGGGGTTTAGGNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGAAAAAGA
ACCAACAAACCAATAGAATTAAAGTTTAAAAGTTTTGGCTCGTACATTTT
GTACTTTGATCATTTTGGTGGTGTATAGGGCCAGCTTCCCTCGAAATGGA
TTTTCTGTAAAAAAAGGGGGGATAAAATTTCAGTACAGAATGGGGTCGGT
AAATAGGGGGGCTTTATACCACTTTGCAATCTATGAATTAGCGTATCAAT
AACGTTATCAACGACTTATATTATACCTATATTTGTGCGCATTAACAGTT
GAGAGCAAACCACAAAACTGAGGACTGAGATTCGAAAAAATAAAATAAAA
AAGTAAGTAGAATTTAACCTTTAAAATCTACTAAAAAGGCAGTAAAAACT
ACTACATCTTGACAAAAATGCGAAATAGAAAATAAAAAGACACAAAAAGC
TTGAATCCATAGATAAACTGAAAAATTGAACATAAAATTCTCAAAACTAT
TGAAAAAACTATCAAAATTTTGAAAATTTGGCAGTCTACCAAATGAATTT
TATTTTAATTTTGATTTTTGAAATTTCAGGCTCGGCCGGGCCCGTAAAAC
AACTAATCAAATTGGTCTCCTCTTATTAATATAAGTTAGACCTATGCAGC
TACTGGGGTATGAAGGAAAGGCCGAACACGAACAATCAAACATGGATTTC
TGTGAATTGTTGATTTTTTATAGGAAGAAGTTGAAGAAAGCGAAGCAGCG
AAATACATTGCAAGAGAATTACCTGAACTCACCGAATCATACAAACAGTT
CATGAAGAGGGTAAAATACTTTGTCAAAAGATACAGCTTCTAGAATAAGG
GTCATTGAAGTGAAAAAAACAGGGTTGAAATACCTTGTAGAGGCTGTAAC
TTTCGATGCAATGCAATTTCAATTTTGTGAAAAATAATTATATAGCTGAC
ATCAGAAGACTCCATATCAAAAATGAAGCTTCTACAATCATGGTCAAAAT
CTAATGAGAATTTAGCTTATTTCCCCTTTTTTTTGAAATTTGGAGTTCGA
GCGAGAAAGTCGCCCTATTGGACCATTCTCGAACTTTTGGATCCTTAGAT
CCTAAGCTGCTAAGTCTTAAATCTAGCGTTAAAACTCAGAGTTGCAACTC
TACCCTTCCAACCTAATTTAGAGCGCTTCCAAATTGTTTGTGGTTATAAG
ATTTCGTAGGAATTTCCCTTTTTTCTCAAATATTATGACCATGATTGTAG
CACCAACAGATGATAAATTCCAATTGTTCTTTTCCTTTTTTCATCTTCAT
TAAAAAAAACATAATTCTAATCTCTAATATTATATAGTGCTCTGAATCAT
TATTTTCAACTATTTATAATTTGTAAGAGTCTTAGAGCGAATGGATTTAG
TTATTTTTGTGCAATAAGGCAAGATGTATTTATCTCACCATTAACGTTTT
CTCATTGATTTTCTTTACCAGGAGGTGATGAAAGACTTTCAGAAATCAGT
CCTCCAAGTGTCAGATTCACCTTTCGTTCGAAAGTAAGTTTCTTCCACTG
ACCTTTAGAAACCACTGACCTTTATATGTGGGGTTTACCGCATATGGTCA
CGTTCAAACGATTGAAATTGTTGAATTGATATTTCAATACCGTCAAACTA
AATAAATACAATGAAATGAATGCTAATAAATATCTAGTTCGTACATGAGT
AATTGATAATTGAAAATGAAAAATTAAATATTTGTGAGAGGCTAAGTCGA
AAATGAGCAAAAACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAGAAGTCAGAATGCCTGAGGTCAAGTAGACCATGAATACAATAT
GAAAATCTGAATATGAGCTATGAATATATAAATATATAATGTCTATGTCT
AACTTAACCTAAATGTGAAAAGAAAAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGAGGTCCTTACTC
CATGGCTGTCATGAGTCAAGTGAGAAGCTGAATGCCTTTAGGCCTTAAAT
ACACTTGATGCACCAAGTTGTCAAGGCAACAAAAAAACAACATAGTTTGA
GAGCATGACCTCAGTTGGCAAAATATACTAAAATAAAATGGTAGCTAAGC
TATGCAAAATGTAAACAAAATGTAAACAAATATGGTGGCTAAAGCTATGA
AATATTTTACGATACAAATTTTTATGAAATTTTCTTTTTTATAATTTTTA
TAATTTGGTTTTATAATCAATAACTTTACATTATATAACCCTGGACCAAG
CAGTATCTGCCATCTTTGATTGGAGTTTTTTTAGAAATTGGTACCCAAGG
AGAAGCCATTGCAATGCTAAAGATTAACGTCTAACGCCGCTACATCATCA
AAAGAATTTGAGGAAAAGTAGACATAGCGCTCTCGATGCATTTACACCGC
TATCGAGTAGTGCCGACAAAGCCTAGACAAAGCTATATCCGCCATCTTTG
ATCGGAGTTTTTTTGAAAGTGGTACCCGCACTGACCTTTATATACCCTGA
ACCAAGTTTTTCAATCCCGGCCAAGCAAAATCTTTTATCGGAGTTTTTTG
AAAAGTAGTACCCTAATGGCGGCACTACTCAATAGCGGTGAAGATGATGT
AGAGTCATTTGACGTTAATTTTTAACATTGCAATGGCTTCTTCTCGAGTA
CCAATTCCAAAAAAACTGCGATCAAAGATGGCGGATATAGCTTGGTCCAG
GGATATATAAAGGTCAGTGGGTACCCGCAAAGAAGCCATTATTGTTAAAA
ACGGCGGTACATCACAAAAAGTATTCTAGTAAAAGTAGATCTAGCGCTCT
CGGTGTATTTATACCACTATTGAGTAGTGCTACCATTAGTGTACCACTTT
CAAAAAGATCAAACTACGAAAAAAGATTTTACTTGACCGGAATTGAGAAA
CTTCCTCCAGGGTTTATATAAAAAGTTCAGTATGGTTACAACGCTTGACG
TTTTCTAAGTCGTTTTAAAGGGGAACTAAGGGCTACATACACTACACAAC
GATAGATAAACAAAAAGAAACAAGTTGCGAAATGTACGAACAAAACGAGT
TAAAATCAACTTTCTTTTCTCACGATATTCCATTTTCTATACAATATTTT
TTTAGGCGATATACTTAATGAGAGCATGTAGTATACCTTTATTTCATTAA
TTTTGAAGCGTTTTTTTATTTTCGTGCACGTTTTTTTTTCTGAGATAAAA
AAATCACTCTTGTTAAAATGATTATTGGGCCATTCCATTTTATATCCATA
CAGGGGGTGGACGAACATTTCCAAGGGGTAATCCGAGAGAAATTCCCAGA
GGGTATTTTTCATTTTTCCAAGGGGGTAAAAAGTTATTCTAAAATTTCCA
GGGTTTAAAAGACTAATTTTGTTCGTCTACCCTCACTTTAAGGGATGAAA
AGAATTTTTTCAAGGGTATTTTTACAAATTTTGCCATTTTCCAGGGGGTA
ACTACACATTTTCAATAATTTTTTTTCGGCTTGAAAAGGTTCGTCCCCCC
CCCCCCCCTGTATGGTTTTTATAAATGGAATAGCCCATTATGACACGAGT
TATAGAAGAAGTTAAATTAAAACGAAAATTTTGAAAATTCACCGCTTCAG
ATTGAACATTGAGGTTTTTGATTTACTTTAAGGGCAGAAAGTTTCCCGAA
GTTAAAAAGTCGCGAAATTTAGCGAATTTAAGTTTCTCGAATTATGGTTT
TAGCCGAAATTTCACAGGTAGAACTTTCGCGAATTCATATAAAATTTGCC
TTTTTTGGTAACAAAACTCATAAAACAATTTAACAAAATAATCTCTTACC
TGGCAGAAACTTTCGCGAAGACGGATCAAAATCGCGAAAAACGCGAAAGT
TTCTGCCCGCGATAGTTTCTGCCCTTAAAGTATACAAAATAAATTCCGTC
TTTTCCCGGATACATTGTAATTCTTATTGAAATCTTTCTTTCAAGTGAGT
TGGACGTGGTGCCGAGCGCTTTGTACGAATTTCCAAACGGTTTCAACAAA
CCNATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043973XLOC_043973Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070682-exon-scaffold_57-1575043694:452265..452346TCONS_00070682-exon-scaffold_57-1575043694:452265..452346Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1575043694:451452..451528TCONS_00070682-exon-scaffold_57-1575043694:451452..451528Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1575043694:450939..450999TCONS_00070682-exon-scaffold_57-1575043694:450939..450999Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1575043694:449376..449575TCONS_00070682-exon-scaffold_57-1575043694:449376..449575Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1575043694:447357..447549TCONS_00070682-exon-scaffold_57-1575043694:447357..447549Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1575043694:446820..446926TCONS_00070682-exon-scaffold_57-1575043694:446820..446926Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1575043694:444087..444173TCONS_00070682-exon-scaffold_57-1575043694:444087..444173Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1575043694:443364..443425TCONS_00070682-exon-scaffold_57-1575043694:443364..443425Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1575043694:440441..440501TCONS_00070682-exon-scaffold_57-1575043694:440441..440501Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1510915933:452265..452346TCONS_00070682-exon-scaffold_57-1510915933:452265..452346Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1510915933:451452..451528TCONS_00070682-exon-scaffold_57-1510915933:451452..451528Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1510915933:450939..450999TCONS_00070682-exon-scaffold_57-1510915933:450939..450999Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1510915933:449376..449575TCONS_00070682-exon-scaffold_57-1510915933:449376..449575Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1510915933:447357..447549TCONS_00070682-exon-scaffold_57-1510915933:447357..447549Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1510915933:446820..446926TCONS_00070682-exon-scaffold_57-1510915933:446820..446926Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1510915933:444087..444173TCONS_00070682-exon-scaffold_57-1510915933:444087..444173Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1510915933:443364..443425TCONS_00070682-exon-scaffold_57-1510915933:443364..443425Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1510915933:440441..440501TCONS_00070682-exon-scaffold_57-1510915933:440441..440501Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1491911889:452265..452346TCONS_00070682-exon-scaffold_57-1491911889:452265..452346Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1491911889:451452..451528TCONS_00070682-exon-scaffold_57-1491911889:451452..451528Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1491911889:450939..450999TCONS_00070682-exon-scaffold_57-1491911889:450939..450999Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1491911889:449376..449575TCONS_00070682-exon-scaffold_57-1491911889:449376..449575Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1491911889:447357..447549TCONS_00070682-exon-scaffold_57-1491911889:447357..447549Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1491911889:446820..446926TCONS_00070682-exon-scaffold_57-1491911889:446820..446926Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1491911889:444087..444173TCONS_00070682-exon-scaffold_57-1491911889:444087..444173Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1491911889:443364..443425TCONS_00070682-exon-scaffold_57-1491911889:443364..443425Clytia hemisphaericaexon
TCONS_00070682-exon-scaffold_57-1491911889:440441..440501TCONS_00070682-exon-scaffold_57-1491911889:440441..440501Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:440441..452346 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
61.6163	61.0983	106.46	106.493	26.3359	24.4525	31.2818	31.5556	38.7261	33.6389	33.2693	27.5567	19.2817	20.376	26.0386	26.6212	44.3688	46.9433	14.7351	13.7788	24.8412	26.3096	34.5038	34.8388	34.7306	29.0077	24.1328	15.3544	18.1995	20.7602
Blast
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BLAST of TCONS_00070682 vs. Swiss-Prot (Human)
Match: ACL6A (Actin-like protein 6A OS=Homo sapiens GN=ACTL6A PE=1 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 8.329e-106
Identity = 159/294 (54.08%), Postives = 210/294 (71.43%), Query Frame = 1 
Query:   58 MSGGLYGGDEVGAVVFDIGSSSTRVGFAGEDIPKSDICSTIGIIKENE----AMDIDNETTKPANRRYHFDPQHY-LPLANKEMVNFVRDGMIHDWDLLEKLLNHCYKDHIRDAADQHPVLMSEAPWNTKEKREKLTELMFEKYNIPAFFLCKNAVLSCFAHGRSTSLIVDSGATHTSAVPVHDGFVLQKGVIRSPLAGDLLTAQCLELMDSWNVDVVPAYMXXXXXXXXXXXXXXYIARE-LPELTESYKQFMKREVMKDFQKSVLQVSDSPFVRNELDVVPSALYEFPNGFN 921
            MSGG+YGGDEVGA+VFDIGS + R G+AGED PK D  + IG++ E +     M+ID +  K     Y+ D     +P  N E ++ +++GM+ DWD  + +L+H YK H++  A  HPVLMSEAPWNT+ KREKLTELMFE YNIPAFFLCK AVL+ FA+GRST LI+DSGATHT+A+PVHDG+VLQ+G+++SPLAGD +T QC EL    N+++VP YM+ SKE V E   A +  +E LP++T S+  +M   V++DFQ SVLQVSDS +       +P+  YEFPNG+N
Sbjct:    1 MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYN 294
The following BLAST results are available for this feature:
BLAST of TCONS_00070682 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACL6A8.329e-10654.08Actin-like protein 6A OS=Homo sapiens GN=ACTL6A PE... [more]
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