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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070662 ID=TCONS_00070662|Name=TCONS_00070662|organism=Clytia hemisphaerica|type=transcript|length=1787bp
CGTTAGGACACTTGGCAATCTTTCTTGGTTTTAATAAAGTTTTACAGAGA
ATTCCCCTTTTTGTCTCGAATATTACGGCCATGAGATACACTTGATTGTA
GTTtacgaggttaggtaggaaatcctacataggtcacgtgacattacaat
agactttgagcgcttgaccaataagaagcttcgcgaAAACAATAGcacca
atattttttgcgacgttgactttttttgcttggaagagcttaaagcacta
catctagctcttcgggctttacagaataATTTGTGACTAtagcattttga
aaattttttctagggaagaaaaatcaaaatgacaTCAACGAAAAACAAAG
CATTACGAGACGTACCACACCAGTGGTGGAAAATCAGTCTTTTCAATCTC
ATCCAGCTCAAACTGAACGGATGGGATTTCTTCCAACAACAAATAGAAAA
ACACCAGAGTACTGTATTCTGTGCCAAAATATTCAACGATTGGACAACGT
TTGTGTGTGACCATGTAGCTGTTGCTGCTGTATTGGACATGACCAAAACG
GAGAGAAGCAAAACCGGCCATGGTTTCTTGGAGCTACGTCCAGAAATGAT
GTTAGGTCAAACGCCTTGTGTGTTCAGTGTTGGCGAAGGTCATCAAATAC
ATAAACCTTTTATCATGAATTTCGTTGCTAAGAGTTACGAGAAACAAAAA
CCCAACATGGTAGCCATAATTGAGAAAGAATTCAAGGTACTCAGTAAACA
TGGTATTGGTGGTGCTTCATCTGTGGATTGGGAAGGAATGTTTTCGACTG
CAGCTAAACGAGTTATTTGTCACATGTTGTTGGGTGTCCACATTGAAGAC
ATTACACCTCTCGAGAAATATACACAAGGTATGTTAACTATGGAAAAAAT
GCCTGGGGAAGCCGACACCTTGATCGAAAACATCATGACGATCTTCAACA
AAGTGGATTCAATAAAAAATCTATCTATCCAATTCTCAAACAGCGGGTTG
ACCCAAGAAGAAATGTTCAAAGACATCTGCTATGTAGTATGTCTGGATGC
CAGCAACGCTATTACAATCTTCGTTCTCAATTCATTGTATTGCTACCTGA
GATTATCCAGCAATGACAAGCAACTGCTGAGAACAGAAGCTGATCAATAT
TTCAAGGATCCAGAACAAACCAATCTATCAGCATTACCAAATCTCCATAA
ATTCTTCACTGAAATGCTACGTTGGTCATCTAAAGCTTTCATTTATGGTA
AAGCGAAATCCGATTTCCAGCTCGATTCAACATCGGGGAAATTCCGGATT
AACAAAGGAGACTTGTTATGCGCGCTACCTTACTTCATACACCGGGATGA
TCAACTTTTCGAGAATCCCGAGCAATTTGATATGCACCGAAACCCGGAAG
AGTCCGAAAAATACAACTTCACCTACGGTGGTCGTTTTCTCGGACAATCT
ACACCGAGCAACCATAGATGTGCTGGATTCTCTCTTTCCAGAGATGTTGT
CAAAACGTTTATTCTCTTTTTCACTCGTTGCCAATTCGAACAGATCGGGG
TGACCGAATGGACTGGAGGAAAAATTTCACGAAAATATGCAAGTGATGAG
CCGCTCAAATTATCCTctttcaaatttgaataaaaacagaCATTTAATAA
AAGGTAGCAATTCTCATGGAAGTTGTTCTCAAAGATTGAAATACTTGAAC
GAAAACAACTTAGTTAACAAATAGAGAATCAagtgaacttgaaatttttc
taatgaTATTAATATAAAGATAAATGAAAGCAACAAC Run BLAST on NCBI transcript from alignment at scaffold_57:242944..245154- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070662 ID=TCONS_00070662|Name=TCONS_00070662|organism=Clytia hemisphaerica|type=transcript|length=2211bp|location=Sequence derived from alignment at scaffold_57:242944..245154- (Clytia hemisphaerica)
CGTTAGGACACTTGGCAATCTTTCTTGGTTTTAATAAAGTTTTACAGAGA
ATTCCCCTTTTTGTCTCGAATATTACGGCCATGAGATACACTTGATTGTA
GTTTACGAGGTTAGGTAGGAAATCCTACATAGGTCACGTGACATTACAAT
AGACTTTGAGCGCTTGACCAATAAGAAGCTTCGCGAAAACAATAGCACCA
ATATTTTTTGCGACGTTGACTTTTTTTGCTTGGAAGAGCTTAAAGCACTA
CATCTAGCTCTTCGGGCTTTACAGAATAATTTGTGACTATAGCATTTTGA
AAATTTTTTCTAGGGAAGAAAAATCAAAATGACATCAACGAAAAACAAAG
CATTACGAGACGTACCACACCAGTGGTGGAAAATCAGTCTTTTCAATCTC
ATCCAGCTCAAACTGAACGGATGGGATTTCTTCCAACAACAAATAGAAAA
ACACCAGAGTACTGTATTCTGTGCCAAAATATTCAACGATTGGACAACGT
TTGTGTGTGACCATGTAGCTGTTGCTGCTGTATTGGACATGACCAAAACG
GAGAGAAGCAAAACCGGCCATGGTTTCTTGGAGCTACGTCCAGAAATGAT
GTTAGGTCAAACGCCTTGTGTGTTCAGTGTTGGCGAAGGTCATCAAATAC
ATAAACCTTTTATCATGAATTTCGTTGCTAAGAGTTACGAGAAACAAAAA
CCCAACATGGTAGCCATAATTGAGAAAGAATTCAAGGTACTCAGTAAACA
TGGTATTGGTGGTGCTTCATCTGTGGATTGGGAAGGAATGTTTTCGACTG
CAGCTAAACGAGTTATTTGTCACATGTTGTTGGGTGTCCACATTGAAGAC
ATTACACCTCTCGAGAAATATACACAAGGTAAGTTCAAAAGAGCACGCAC
AATGCATTGTTTTGCCACCAAACATCTATAGTTATATAGTAACTGAGCTT
GCACACAACGTTATTTCAACATTCATCTAACGTTATATGGACGTTGTGAA
CATTAGATAAAGGTTGAAAGTCAGGAAGAAAAGACACTTTTTTATTCTGC
TACTGGCAGTTTCATGCCACTTTGGTGACAATCTTCAGGCAACTCAAATA
AATAAAATAAAGGTCAAAAGAACGTTGCGTGCCAGCTGGGCAACTTCAGG
TACTTGGTGAGACCCCAACGAGTTGGCTTCAAACCAGCCAACTTGATCAT
TGATAAAATTGTAAGCTTGTATGTTGATTCTGACCAATGGGAAGGTAGAT
ACTGGCTTCAATCAGTAATTAAAAGCATTTTCATCTCTCTCTTTTACAAA
AGGTATGTTAACTATGGAAAAAATGCCTGGGGAAGCCGACACCTTGATCG
AAAACATCATGACGATCTTCAACAAAGTGGATTCAATAAAAAATCTATCT
ATCCAATTCTCAAACAGCGGGTTGACCCAAGAAGAAATGTTCAAAGACAT
CTGCTATGTAGTATGTCTGGATGCCAGCAACGCTATTACAATCTTCGTTC
TCAATTCATTGTATTGCTACCTGAGATTATCCAGCAATGACAAGCAACTG
CTGAGAACAGAAGCTGATCAATATTTCAAGGATCCAGAACAAACCAATCT
ATCAGCATTACCAAATCTCCATAAATTCTTCACTGAAATGCTACGTTGGT
CATCTAAAGCTTTCATTTATGGTAAAGCGAAATCCGATTTCCAGCTCGAT
TCAACATCGGGGAAATTCCGGATTAACAAAGGAGACTTGTTATGCGCGCT
ACCTTACTTCATACACCGGGATGATCAACTTTTCGAGAATCCCGAGCAAT
TTGATATGCACCGAAACCCGGAAGAGTCCGAAAAATACAACTTCACCTAC
GGTGGTCGTTTTCTCGGACAATCTACACCGAGCAACCATAGATGTGCTGG
ATTCTCTCTTTCCAGAGATGTTGTCAAAACGTTTATTCTCTTTTTCACTC
GTTGCCAATTCGAACAGATCGGGGTGACCGAATGGACTGGAGGAAAAATT
TCACGAAAATATGCAAGTGATGAGCCGCTCAAATTATCCTCTTTCAAATT
TGAATAAAAACAGACATTTAATAAAAGGTAGCAATTCTCATGGAAGTTGT
TCTCAAAGATTGAAATACTTGAACGAAAACAACTTAGTTAACAAATAGAG
AATCAAGTGAACTTGAAATTTTTCTAATGATATTAATATAAAGATAAATG
AAAGCAACAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070662-exon-scaffold_57-1575043694:244277..245154 | TCONS_00070662-exon-scaffold_57-1575043694:244277..245154 | Clytia hemisphaerica | exon |
| TCONS_00070662-exon-scaffold_57-1575043694:242944..243852 | TCONS_00070662-exon-scaffold_57-1575043694:242944..243852 | Clytia hemisphaerica | exon |
| TCONS_00070662-exon-scaffold_57-1510915933:244277..245154 | TCONS_00070662-exon-scaffold_57-1510915933:244277..245154 | Clytia hemisphaerica | exon |
| TCONS_00070662-exon-scaffold_57-1510915933:242944..243852 | TCONS_00070662-exon-scaffold_57-1510915933:242944..243852 | Clytia hemisphaerica | exon |
| TCONS_00070662-exon-scaffold_57-1491911889:244277..245154 | TCONS_00070662-exon-scaffold_57-1491911889:244277..245154 | Clytia hemisphaerica | exon |
| TCONS_00070662-exon-scaffold_57-1491911889:242944..243852 | TCONS_00070662-exon-scaffold_57-1491911889:242944..243852 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_57 | supercontig | scaffold_57:242944..245154 - |
Blast
The following BLAST results are available for this feature:
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