TCONS_00070632 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070632
Unique NameTCONS_00070632
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length537

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070632 ID=TCONS_00070632|Name=TCONS_00070632|organism=Clytia hemisphaerica|type=transcript|length=537bp
gtactagtaataacatggtttggagggtgatttgggaaTAATAgtcccga
ggttcattgaaaacatttcaaaattggCTGAACGTAGTGAAGtcgaagat
tttctttttctctattttcgCGGGGTGATTACAGCAGGGCTATTACGGAT
TAATCACCCCGCTCCTCCCTTACAATTCTAAGCTAAATGTTATCAGTCTA
GACTTCAGTCTAGAATACAACGTTTAAAAAATCCTATTCTCTCTTCCACC
TTCAGGTGAGAAAGCATACACCGATAGCGACTTCAAACAATGTATCTCGA
CTTTCGAAGAATCTTTAACACTTTTCTACAAAGAACTTGCCAAGTGTAAC
GCAGTATGTGAAGAACAAGATACGACAAAAGAAGTCTCCTACACAGCCTC
TCTATTCAAACACTTTCAAGGCATTTTGGCGTGCCGTAAAAAATGTCAAG
TAGCGTTAACCAAAGTTGATGGAGAATCATCCAGAACGCATTTTGTGCCA
CAATATTTTCATTACCTACAATACTGCTACTTTCAAG
Run BLAST on NCBI

transcript from alignment at scaffold_57:220879..221415+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070632 ID=TCONS_00070632|Name=TCONS_00070632|organism=Clytia hemisphaerica|type=transcript|length=537bp|location=Sequence derived from alignment at scaffold_57:220879..221415+ (Clytia hemisphaerica)
gtactagtaataacatggtttggagggtgatttgggaaTAATAgtcccga
ggttcattgaaaacatttcaaaattggCTGAACGTAGTGAAGtcgaagat
tttctttttctctattttcgCGGGGTGATTACAGCAGGGCTATTACGGAT
TAATCACCCCGCTCCTCCCTTACAATTCTAAGCTAAATGTTATCAGTCTA
GACTTCAGTCTAGAATACAACGTTTAAAAAATCCTATTCTCTCTTCCACC
TTCAGGTGAGAAAGCATACACCGATAGCGACTTCAAACAATGTATCTCGA
CTTTCGAAGAATCTTTAACACTTTTCTACAAAGAACTTGCCAAGTGTAAC
GCAGTATGTGAAGAACAAGATACGACAAAAGAAGTCTCCTACACAGCCTC
TCTATTCAAACACTTTCAAGGCATTTTGGCGTGCCGTAAAAAATGTCAAG
TAGCGTTAACCAAAGTTGATGGAGAATCATCCAGAACGCATTTTGTGCCA
CAATATTTTCATTACCTACAATACTGCTACTTTCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043945XLOC_043945Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070632-exon-scaffold_57-1491911889:220879..221415TCONS_00070632-exon-scaffold_57-1491911889:220879..221415Clytia hemisphaericaexon
TCONS_00070632-exon-scaffold_57-1510915933:220879..221415TCONS_00070632-exon-scaffold_57-1510915933:220879..221415Clytia hemisphaericaexon
TCONS_00070632-exon-scaffold_57-1575043694:220879..221415TCONS_00070632-exon-scaffold_57-1575043694:220879..221415Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:220879..221415 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.219966	0.231611	0.227474	2.00605	0	0.505957	0	0	0	0.23154	2.1801	0.260027	0.170921	0	0	0.191818	0.612686	0.236885	0.310238	0.554385	1.12157	0.377846	0	0.310998	1.01357	0.430083	0	0.387187	1.67026	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070632 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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