TCONS_00070630 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070630
Unique NameTCONS_00070630
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length804

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070630 ID=TCONS_00070630|Name=TCONS_00070630|organism=Clytia hemisphaerica|type=transcript|length=804bp
TGATGGTCAACTGAATTTCTTACATTATGTTATCAAGACAAGATCATGTT
TTCAACTTTGtaaagaaaagtttttgggcAGAAGAGGACGGATTGCAAAA
TATGTTAAAGAATTATTCGAGAATAAAGAACCGTACAGTTTTCTTCAATA
CTCACTATATAAGATTGGAGAAGTGAGCAAAGCACTTGCTGCAGCATACA
CTCATTTCGAAGCCAACCCATCCAATGAATTGATGAAAGAAAATATAGAA
ATTTTAATGTCAAAACAGAACAAAGATTGGGCAGATTTGACGTCATTAGA
AGAACCACCCCATATATCTTTGTACAAGAAAGGTGAGAAAGCATACACCG
ATAGCGACTTCAAACAATGTATCTCGACTTTCGAAGAATCTTTAACACTT
TTCTACAAAGAACTTGCCAAGTGTAACGCAGTATGTGAAGAACAAGATAC
GACAAAAGAAGTCTCCTACACAGCCTCTCTATTCAAACACTTTCAAGGCA
TTTTGGCGTGCCGTAAAAAATGTCAAGTAGCGTTAACCAAAGTTGATGGA
GAATCATCCAGAACGCATTTTGTGCCACAATATTTTCATTACCTACAATA
CTGCTACTTTCAAGAAAACAATCTGATAGAAGCAACGAACGCAGCAGAGA
GCTATCTACTCATGATTCCCAGTGATCCTGTTATGTCAAAGAATCTCTAC
TGGTACCAAAATCAACCAGCTGTCAAAGGAAAAGCTGTTGGCCCAAGACC
AAGAGCGAAGAAATACATGAAACAGTTCGCAATCGAATTGAATTTGGCGC
AAAT
Run BLAST on NCBI

transcript from alignment at scaffold_57:211995..222783+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070630 ID=TCONS_00070630|Name=TCONS_00070630|organism=Clytia hemisphaerica|type=transcript|length=10789bp|location=Sequence derived from alignment at scaffold_57:211995..222783+ (Clytia hemisphaerica)
TGATGGTCAACTGAATTTCTTACATTATGTTATCAAGACAAGATCATGTT
TTCAACTTTGtaaagaaaagtttttgggcAGAAGAGGACGGATTGCAAAA
TATGTTAAAGAATTATTCGAGAATAAAGAACCGTACAGTTTTCTTCAATA
CTCACTATATAAGGTATACCTTCTTAAAAATTTAATAGGCTGTTCCGTTA
CAAATCTATACACAGGAATTTGGACCAACCTATTCAAGTCAAAAAGATAT
TCatggaaatgtgtggataccctgTAAAATTAGCAAAGAAACCCTGGAAA
CCCTTTAAGTATTTTTCATGCTTAAAGTGATGGTGAAGAAACTAAAATCA
GTGCTTTAttccctggaaattttagaataactttttaccccctgaaaaat
gaaaCGACACTCCTTTAACCCCCctcccctggaaattcttcccAGACGTT
GCCCCCTTTAAATGTTTacccaccccctgtatggatatacaATGAAATGG
CCCAATCTTGTTTTAACATTCGTGCAAATTTTTAAGGTAGTAACTACTTA
AATCGGATACACCTACCAACCCTTAGCGGTGCAGTCAGCTTTTTAGGgga
ctggtaatgaatttacaagaAACATTAGTTCTCAGTGCACGGCATTTTTA
GGCTACAACTAAATCAAACCAAGCAAAtatttacattaatttattgCTTT
AATAATGCAAGGGTATCTTACATATTCCACAAGAGAACTCCTACACTTGT
GCTTTCGATTACCATCATCgagaagaattttttattttcgttacCAGTCT
CCTCAAAAGCGTTAAGGGTTGGTGTATTCAAAGTTCTTTGTGAAAGGGTT
CGAAAAGTTATACCTATCTGTGTAAAAATTAAGGGACTTGAGAGGGCTAA
CTCTCTATTTTTTTGTGTTTCTATAGGTAAAAACAATATCCATCAAAGGG
AATAGGGCTCAAAAAACAGCATCATAGGACCATTCCGAAAAAACACCTTC
AATTGTAAATAGTTTACGCCCAATTAAGTTCGTAGCGCTCACATGCTACG
GTTCTGTTTCGCTCAGAAACGAAACGaagtcattctattggttaaatacA
AGTTTTACGTCGCTTGTAaacaatagaatggcttcatttcgtttcggagc
gaaacagaaccgtcacgtgcgaacataaTCTACTATGAGTGTTATTACTG
GTGGTCAAAAGTCAAATAAGTGCGTGGCATAACGTACAAATTGCTCTGAA
ATGGCTGTACAGtggagtcttcataactcgaacactcgcgataagcacaa
atttgttcgagttatggagtaagatttATAAGGCATTATTAACTGAAGAG
ACAAGATAACTtgttcgagttgtagaggttctagttatggagactccgtt
gtataattttatattttgcttttattttagATTGGAGAAGTGAGCAAAGC
ACTTGCTGCAGCATACACTCATTTCGAAGCCAACCCATCCAATGAATTGA
TGAAAGAAAATATAGAAATTTTAATGTCAAAACAGAACAAAGATTGGGCA
GATTTGACGTCATTAGAAGAACCACCCCATATATCTTTGTACAAGAAAGG
TTGGTGTGTCATCTTTATATTATTTCCATCACGAAAACATATATTTTGTT
TCTAGTTTGCTTGACGAAATGCAAAATTCGAATGTTCTGAAATTTAGACG
TTCGAAAATCTGATGAATctgaagaaaaaacaacatgACGGACTAGTCAA
TTTAAAAACTGGACACCCGTCCACGAAAACAGATATATTCTTTCACGTTA
GATAcacaatcttttttataagcaactccaatttacGATACAGGGCTgag
gttgcttagcattctagctcagtttctgaaaaatttgctttttgaTCATC
CCTCATATTATACCATATCTctgcttattgggtcaagggctacCGTTTGT
CatggttagattatctaaaaaactttttctttaggCTAATTTTCAGTGCT
CGAGGTTGGCAACCCGGTTGcttgtaaagaaaaaactgtATAGGCTAACT
AGTTACAGACTTCCTGTGGAATGGTCTCCTGTTTTTAAATTTACAAGTCC
GCCATGTTGTTTTTGgacccggtggaggttctataaattaacccatgtcc
gttcgtccgttcgtccgttcgttcgtccgtctgttaccagcttttctcag
gattggctcattagttttttctgattttttgcacaatgatgcaaaatggc
aatgtccaGAACgcgacggagcccgatttttaagaaaaaatttatttggg
caaatttgggccaaaaactacctaaaaataggcttttttggactttgtgc
aaaatcctgtcattacttttttctgattttttgtacaaagatggagggca
agattctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNactcattatttttttctga
ttttttgcacaatgatgcaaaatggcaatgcctaaaatgtttcggagccc
gattttcgaaaaaaaatatatttgggcaaatttgggccgaaaactgccta
aaaatagggttttttggactttNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattcc
ctttaaccaaataagaaaatatagcttttctcaaagttgactcattattt
ttttctgattttttgcacaatgatgcaaaatggcaatgcctaaaatttga
cggagccagatttttgaagaaaaaaaatatttgggcaaatttgggccaaa
aactgcctaaaatagggttttttggactttgtgcaaaatcctgtcattac
ttttttctgattttttgtacaaattgggcctgaatggtttaagtgatttt
cgtatttggggaaattcctttttaccattttacattattgaacacacaag
ctttactgtatttttccattctgaatttttgtacaattattgtcactttt
ttcttattttcatctgatgttaatcattaggtaggtccattcagcatgtt
gcttgtttctttTACGTCAGATTTTCGAATGTTCAAACGTCTGCTTGAAA
CAAAATTATGGACTAGTTGGCTATAAAGCTGGCCACACTTCCGCTATTGT
AGGATCATGTCAAAAAGTCAGAGATAAGTGATCTCGGTGTCTTAAAGACA
ACTTATAGTGTCATAATATCCGACAGATGCATAGCAGTTTTTAGGAGAAG
GAGAGTGAGTGATTTTGGTTCTCATGGTTATCCCGATTTTTTATTGGCTG
GCTTTCCATCTGTATcttgtatttattttttcgaTCATTATGGATTATCA
TTATGTTGATCTGCTTAATCACCAGCCTACTTTCTGTTACATTTCTTTGT
TGTTAGGGCTGTCCTTGTCTGTAAACAGACCTCCTATATACACCGTACTT
TATACGTGAGATTGTTGTACAAAGTCTTTGTCTAAAACCCATTCTTAACT
TCAGTTGAGTAAaattctgtctgtctgtctgtctgtctgtctgtctgtct
gtctgtctgtctgtctgtctgtctttaGATATTTGGATGTATCTTGGATG
TATTTCAGATGTATCCGACAAAATTCattctttgattgatttttcaattt
ttttcattgtacAGATTGTATTTTGTTAGTTCGTTGCTTTAAAAATTGTG
CTTTTGTCAATAAGTCCTTATGTCTCACTACGGATTGCATGGATTTTATC
AGTCGTTGTCGAGACAGCTACCTGAAAATGAAAGGTTTTAGGTCCGTGTG
CAAATTATTTTCCAATCTCTAATCCTGTCAATATTTATTAGTGTAGTGAC
AAATTAGCTTTTTTGCAAGTTCGGACATGAAAGTCTAGTTGACGtcggta
aaagaaaaaaacatatgcttattcagatttcattttctttcaaattgaat
ATTACAGTAAAATACATTTTAACAGTTTATAAGCTATGGTGGCCGAGAAG
GGGCAGCTCTCTAAATCATTCTTATGTTCCCTTTAGGACACCTTTAAAGT
TGACTCCCAGTTAACTAAACATTCGATTTCCGCTAAAAGAGTTTTTTAAT
ATAGTTCTTCTGGAACTGAAAGTCGCTAATGTATTGAAAAACTGTCCCTT
ATCAGAATGCCACAAGTTATAACAAATTCTTTGGTATACCAATTTGACTT
GGAGTTAActtaaaaatttattgataaaccTCCGTTCAAAGAAACGTTAA
ATTTTGGTAACCTTGGTAACGCACTTTATTTCTTAACCCCATAACAGGTT
ATCCATTCTACATACGCTACACTCTGCTTTTAAGAGATATAGCGTCTTGG
TCGTTCAGCCGAAACATTCAAAACCGCGTTgcatttttcttgaaatctgA
AGCTTTCACTTTCGGCTGGTTAATGGTTATGATTGACCGTTGATTTTTTG
CGCGATTGTTTTGATAAGCCAATCACCGCGTTCAAATGCTTATATAATAT
ATTCATCCCAAAAATGGATATAAAAGATCAAAGTGGTCCACCAACCTGAC
ATGATTTTGTGAAGTGAGTATGTGTCATGCGTGGAGTAATCAGAATCTAC
TCGGAGACTACTAAATtctaaatgtaaaaaaattaaatggcGATCAAAAT
CCAATCAAAATAAAAGACTGATCCATAACAATGTTAGGTCTAATAGTGGT
AaagcatagatttataaagcctgaagggctagatggcgtgcttcGGCTGA
AAAATATGctgtggttaggtaggaaatcctacctaggtcacgtgacatta
caatagaatttcagcgctggaccaatcagaagcttcgcgggttttcgaga
acaatagcaacaatattttttccgatattcaattttgtttgcctgcgatg
gcttaaagcacgacatctagcatTATAAATCCGTGGGTAAAAACTAGACT
CATTAAAGAGGGTTTGGCCATTTCGTAATCTGGACAGCATTAGCAGATTT
ATCAGTCACCATCACTCCTCCACTAGCACCACGGTCAAATTTCTTGCTAT
TATGACCAGGGCATATAGGTAGGATATACCACCATTGGTCGGGATTTGCA
AGCTCCATATGCCCACCAAGCAAGGTTAAGGGGGTAGTATGTTTTTGGTG
TGGTGCGCTATCAGGGCTATTGATGTAGCAGATGGTAGCCATTTTATTGA
AtgctttttgccaaaaattgaTCCAAGGTGCTCCTCGTTTGTCTACCGCA
GAACCGTTGACATTGTATACTTTCAAACCACCAAAACCAACCTTTGTACC
TGGTGGTGATATTAAAAAATTGTAGTACTTTTCCAAAGATTAATTCTGTA
TGTGAGACCGTTGTGCAAAGGTAGAGCATTCAGCTACGGCGCACAAGGTT
GTGAGTTCAATCCCCGGCCTGGTCATACTAAAGATCCTAAAATTGTACCG
TCGTTTTGTATTagtttcccatttccgcactaagattcctttgtcatttt
tctagcgaaaaaagaccaggacttcggttagttgaaaaatgagcttcgga
aagttaggcagtttcaCGAACAAACAtaagattttccgtacctttagaaa
caaaccctGTCCAATCTCATGCCGGTTATCCAGGAAAGAAATAGCGGAAA
AATTtcggaaaagtgacaagaatcttagtgcggaaatagGAATCTTATAC
AGAACGACGGTACTTGATGCTTATCAAGGGTAAAGTGGAAagatccaggg
agaaagagggGCACCCTCCCCTaacttcgggtagatagctatcgaaagaa
aaGCCTTCGGATCACATCCGACTGCGGCCGCAGACTTAATACTTTTCATC
TAGTTCTTTTCCTTTCGCTATTTCCTTCTGAAACAGAATACCAAAAGAAA
TATCAAGCTTTGCTTCAGACTTTTGCATAAATGAAAGATCAACTAACCTT
TAGAAACGAAATAATTTCCAGCAGCATCAAACGACACGTCCATTTCTATC
GGATCATTGAATTTCGCGAACATTTCGTGCGCCTCTGgatctttttctct
caaacTATTCAAAACGTGTTCAGGAATAATTGCTGCGTTTCTAATCTCAC
CACCATGTTGTACAAACAGCATCTTAAATGGCACATCCACGGGTATACTT
TCCAAGTCTTCAGCAAATTTTCTATGAAAATCTCTTGCCGGCGACAAAAG
CTCACTTGCTTCTCGAACAGGTTCTGGCCCTGTCGACAAAAGCTCTTTTA
GGGTTATTTTTGCGTCTTTTATATCCATGCTACCTCTACTGTTTAGTATC
ACAAATATGATTTCTTGTTGGTTTTCGTTTACCTTTTTATACACTTTTTA
ACATAATGTGTACCATCTACTATAAACATTATAAAGATCTTTTTGTAGAC
ATTCCTGAACAATACTATGACGTCTTTAGAAgctgaatttgacaaaaatg
acTGCTCCTAAAACAATTTCTAAGAAACGATTACttagtaaaatatttct
tgttcTGACTTAAAAGAATTGAcgtctttacaattttcaagctaaaactt
gaaGAAACTTACGATTATATCTGAAACATTCCAAATAATTAGCCGCAAAC
CCTATTCTTATCTGATGATGCTCCGATGGCGGGTtttcggccgcccacgc
taaagctctaaagaagcGGCCCGATTTCACGTCGGAAACACAGATAGGGA
CGgaatataagatatctgtggtcgGAAAGGAATGAAAGTTGGGAATATGG
TgtcccgctgcaaaatcctcGACGCGGTCTAGCGAAATTCTGAAGATTCA
TTTTCCTGGGcgttattttattattatttgtttGTGCTAGACTAGTAGAT
TTCTTTTGCTTTCATGTCTCATAGAGTGAGTGACATTTTTAAGAATCAAA
TTATGAAAGCTCTAGTGTGCCGTCTGCAAAGTTTTGTATGTGTAATTTGG
CAGCAGTCAGAAGTATCAATGCTCATCCTTATCTTCTATAGGCATAAGAT
AAGTACATCTACGCACTGCATAATAATCACATGACCTAATTATTTTAAAC
GTTGGCTCTAAGCTTAACTCCACTATTTACTATATTTCCACATTTTACTA
TTTGTAGGTTTAAAAAGAGTTGACTTagccttttttctttttttgctagC
AATCCTCTGTATGTGGGCCAAGGCGTTTTCATCCTTTGACTCTATGTACA
ATTATGCTAAGTTACCTTTCCCCGTTTCTAAAAGAGGAAATTTAGGTACT
TTAGTCATCATTGAGTTAACCTTATAACAGTTCATCTATTCTAACTAAGG
GATGGGGTCAATGAGGTATAGCCGGCATGGTGGATTAAATCTACCGCTAA
TTAgtgctttgtttttgtttttttttacatttttcgaattctttGTAAAT
ATGCTATAATTAGCCCCATTACATCTCCTCTTTTCGAAAAGTTAGACATG
AGTTAGACATTTCGGTCAACATTCGAGGTAGAcaatcctatcgtctacac
aagatcactaaaaaaaggGAATACTTTAGGAGGCGTGATAGATTCGGGCG
GAGTAAGCCCGgggcggaggtgtttacagtgtaCGTTAGTTCCAAACTCT
ACCTCCACTTTTTTTCTCGTAAACCACCCTGACGCCCTGACTATACGCTT
ATATATTTTCCCGCGGTTACTGATCCTCtaaaacggacgatagcatcgtc
aaCATTCGAGGTCACTTTCAAAGCTTGATTTCTCCAATGGGGAGCGCTAA
TATCACATCATATCATTATTATAGTTCATACAAACTAAAGTAACATTGTC
CCGTAACagttatcgtattatcatataacacatATATTACTGTATAACAC
GTATTAGGTAATACGACTCCAGCCTCTAATATAACATTTTTAACGAAAGC
GACttggttctaatgtttatgtttatgattgGCTTTTGACTTACCAAATG
GGAAAAGCTCGTATCACATCATATCATTATTATAGTACATACGAATTAAA
GTAACATCGTCCCGTAACagttatcgtattatcatataacacatATATTA
CTGAATAACACGTATAATacgattagtactagtaataacatggtttggag
ggtgatttggttctaatgtttatgtttatgattgGCTTTTGACTTACCAA
ATGGGAAAAGCTCGTATCACATCATATCATTATTATAGTTCATACAAACT
AAAGTAACATCGTCTCGTAACagttatcgtattatcatataacacatATA
TTACTGTATAACACGTATTAGGTAATACGACTCCAGCCTCTAATATAACA
TTTTTAACGAAAGCGACttggttctaatgtttatgtttatgattgGCTTT
TGACTTCCCAAATGGGAAAAGCTCGTATCACATCATATCATTATTACAGC
TCATACGAACTAAAGTAACATCGTCCCAGTTATCGTATTATCGTATAACA
CATATATTACTGTATAACACGTATAATacgattagtactagtaataacat
ggtttggagggtgatttgggaaTAATAgtcccgaggttcattgaaaacat
ttcaaaattggCTGAACGTAGTGAAGtcgaagattttctttttctctatt
ttcgCGGGGTGATTACAGCAGGGCTATTACGGATTAATCACCCCGCTCCT
CCCTTACAATTCTAAGCTAAATGTTATCAGTCTAGACTTCAGTCTAGAAT
ACAACGTTTAAAAAATCCTATTCTCTCTTCCACCTTCAGGTGAGAAAGCA
TACACCGATAGCGACTTCAAACAATGTATCTCGACTTTCGAAGAATCTTT
AACACTTTTCTACAAAGAACTTGCCAAGTGTAACGCAGTATGTGAAGAAC
AAGATACGACAAAAGAAGTCTCCTACACAGCCTCTCTATTCAAACACTTT
CAAGGCATTTTGGCGTGCCGTAAAAAATGTCAAGTAGCGTTAACCAAAGT
TGATGGAGAATCATCCAGAACGCATTTTGTGCCACAATATTTTCATTACC
TACAATACTGCTACTTTCAAGGTAAGGATCTACGAAATTGTCAacctttt
tggaatttttggaatTGTTTGGGATGGTTATTTTTCTACGTTCTTTATAT
CAACCCCCGGTGGTAAATATTGAGTTGGTTagaaaaaaggtaaaatattg
ATACGTTATATCTTCAATAATGttaccgtattactttgaataaactaTTC
GACTTTGAGGAACACTTTTCAATAAACGAGTTTCGAGTTTATTTGAACAA
GTAGCTGCAAGGAGATACCCCATATGATAATAATTGTattattttagtat
ttgaactgattttgacccctaaattgacTTATTTGTACTCAAATAATAAC
ATAAAGGCCAAACAAGGTTcacgttttcttttataaaatgacCTTGggta
aaaattatttaataaacgttCATACGGTAATAGATATTAATAAATTATTT
CGCCATTTCCCTAAAAGATTACACAGtgacgctctttaattcgattttca
aggggaattcaatttttatcgaataagggagcgtatcgtaGAACGTCGAG
TTGGAGAGCGTGAACTTTAATTACTATTTGTTCTGGGGGTATAACCAATA
CTTCGTCGTTTGACTATTTTGAACGCAGAAAATTTATTTACTCTATTTAG
AAAACAATCTGATAGAAGCAACGAACGCAGCAGAGAGCTATCTACTCATG
ATTCCCAGTGATCCTGTTATGTCAAAGAATCTCTACTGGTACCAAAATCA
ACCAGCTGTCAAAGGAAAAGCTGTTGGCCCAAGACCAGTAAGCTTTGTTT
TGGATACGAAAATATTCATTAGGTTTCACTTATTTTGTATTATTTCTCTA
GCGGCTGTCGGTGGAGCCAGGAGTGaattctatttgcgctagacctggga
gatcgaattcTAAAGCTGAGCAGCACACCTTCTTTCACTTTCAGCTCCCT
GTTATTTACCGCCTAGATCGTACTCAATCTGAGTTACTTATTCGCTGAGT
TCGCAGtggaccggggatcgaacccacaacccttaggattataaggcgaa
tgctctaccgactgagctaaccggccacAATGTGGAACCTTAGCTCTAGT
TTGGCTATTCTAATAACTCTATCTAAGGCAGATAGTTGGCTGTCTAAAGC
CGAtacattgccctcttttgacgtcaacatgcaatgtcttctttcaatct
tttgcaagcaaagattttaactgccaactttgcgCCCAGTGTTCGCCTAC
TCAAATAATTAGAAGAGGCAGGACAGAAAGTCGACTAGTTTAGACTGGTG
CTTATATTCGATGAAATGCGTTTGTTTCACTTATAGAGAGCGAAGAAATA
CATGAAACAGTTCGCAATCGAATTGAATTTGGCGCAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043945XLOC_043945Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070630-exon-scaffold_57-1491911889:211995..212157TCONS_00070630-exon-scaffold_57-1491911889:211995..212157Clytia hemisphaericaexon
TCONS_00070630-exon-scaffold_57-1510915933:211995..212157TCONS_00070630-exon-scaffold_57-1510915933:211995..212157Clytia hemisphaericaexon
TCONS_00070630-exon-scaffold_57-1575043694:211995..212157TCONS_00070630-exon-scaffold_57-1575043694:211995..212157Clytia hemisphaericaexon
TCONS_00070630-exon-scaffold_57-1491911889:213425..213593TCONS_00070630-exon-scaffold_57-1491911889:213425..213593Clytia hemisphaericaexon
TCONS_00070630-exon-scaffold_57-1510915933:213425..213593TCONS_00070630-exon-scaffold_57-1510915933:213425..213593Clytia hemisphaericaexon
TCONS_00070630-exon-scaffold_57-1575043694:213425..213593TCONS_00070630-exon-scaffold_57-1575043694:213425..213593Clytia hemisphaericaexon
TCONS_00070630-exon-scaffold_57-1491911889:221134..221415TCONS_00070630-exon-scaffold_57-1491911889:221134..221415Clytia hemisphaericaexon
TCONS_00070630-exon-scaffold_57-1510915933:221134..221415TCONS_00070630-exon-scaffold_57-1510915933:221134..221415Clytia hemisphaericaexon
TCONS_00070630-exon-scaffold_57-1575043694:221134..221415TCONS_00070630-exon-scaffold_57-1575043694:221134..221415Clytia hemisphaericaexon
TCONS_00070630-exon-scaffold_57-1491911889:222045..222181TCONS_00070630-exon-scaffold_57-1491911889:222045..222181Clytia hemisphaericaexon
TCONS_00070630-exon-scaffold_57-1510915933:222045..222181TCONS_00070630-exon-scaffold_57-1510915933:222045..222181Clytia hemisphaericaexon
TCONS_00070630-exon-scaffold_57-1575043694:222045..222181TCONS_00070630-exon-scaffold_57-1575043694:222045..222181Clytia hemisphaericaexon
TCONS_00070630-exon-scaffold_57-1491911889:222731..222783TCONS_00070630-exon-scaffold_57-1491911889:222731..222783Clytia hemisphaericaexon
TCONS_00070630-exon-scaffold_57-1510915933:222731..222783TCONS_00070630-exon-scaffold_57-1510915933:222731..222783Clytia hemisphaericaexon
TCONS_00070630-exon-scaffold_57-1575043694:222731..222783TCONS_00070630-exon-scaffold_57-1575043694:222731..222783Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:211995..222783 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	2.80097e-06	0	12.926	11.1549	3.26167	7.42336	6.39856	5.32822	0.00422199	0.951431	3.66296	5.21483	0.000120715	3.20394e-06	0.501058	4.86089e-05	0	0	0	0	0	0	2.8035	1.18954	0	0	0	0
Blast
[Close]
BLAST of TCONS_00070630 vs. Swiss-Prot (Human)
Match: CRTAP (Cartilage-associated protein OS=Homo sapiens GN=CRTAP PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.134e-32
Identity = 79/260 (30.38%), Postives = 134/260 (51.54%), Query Frame = 2 
Query:    8 QLNFLHYVIKTRSCFQLCKEKFLG-RRGRIAKYVKELFENKEPYSFLQYSLYKIGEVSKALAAAYTHFEANPSNELMKENIEILMSKQN-KDWADLTSLEEPPHISLYKKGEKAYTDSDFKQCISTFEESLTLFYKELAKCNAVCEEQDTTKEV-SYTASLFKHFQGILACRKKCQVALTKVDGESSRTHFVPQYFHYLQYCYFQENNLIEATNAAESYLLMIPSDPVMSKNLYWYQNQPAVKG---KAVGPRPRAKKYM 769
            +L     +++   C + CK+     R+ + ++ V   F+ +EPY FLQ++ +K   + KA+AAA+T    +P +E+MK N+    S    +D+  +  LE   + SL+ +  +AY   +++  I+  E +L  F+K   +C A CE     K+   +  S+  H+  +L C+ +C+  LT V G      FV   +HYLQ+ Y++ N+L  A   A SYLL   +D VM +NL +YQ      G   +   PRP A ++ 
Sbjct:  105 ELRLFGGLLRRAHCLKRCKQGLPAFRQSQPSREVLADFQRREPYKFLQFAYFKANNLPKAIAAAHTFLLKHPDDEMMKRNMAYYKSLPGAEDY--IKDLETKSYESLFIRAVRAYNGENWRTSITDMELALPDFFKAFYECLAACEGSREIKDFKDFYLSIADHYVEVLECKIQCEENLTPVIGGYPVEKFVATMYHYLQFAYYKLNDLKNAAPCAVSYLLFDQNDKVMQQNLVYYQYHRDTWGLSDEHFQPRPEAVQFF 362
The following BLAST results are available for this feature:
BLAST of TCONS_00070630 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CRTAP2.134e-3230.38Cartilage-associated protein OS=Homo sapiens GN=CR... [more]
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