TCONS_00070627 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070627
Unique NameTCONS_00070627
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1269

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070627 ID=TCONS_00070627|Name=TCONS_00070627|organism=Clytia hemisphaerica|type=transcript|length=1269bp
ATCCATTTTGTCTTTCTAGTTTTACAGAAGGTCTTTGTGGCCATCTGAAC
ATCGCTTTCATCAAGCACTCCTTATAATATTTTCTAATTCAAACAGttgt
aattttcttctttttttagaaccaaatggaaaaaataaattaaatttttc
aaaaaacataatTATACTTATACAAATTTACACACGTATAACGATGAAGA
ACCTTGTCATATGTTTGGTTTTCAAAGTGTACCTTATAACTATCGTGTTT
TCAGAACACATAGAAAATTATGATGACAAGCCTGCATATGATGAACTGTA
TCAATCAGGAAGGACATCTTATGATAATGACAATCATTTAGAAGCTGTAT
CATTCTTTGAAAAAGCAATAGCAGATTACCGCCATGAGCAAGAAGTTAAA
GGACAATGCTGGTTACGTTGTCAAGACTCTATTAAAGATACGCAGAGTGT
TTATTCAACTTTAATTGATGGTCAACTGAATTTCTTACATTATGTTATCA
AGACAAGATCATGTTTTCAACTTtgcaaagaaaagtttttgggcAGAAGA
GGACGGATTGCAAAATATGTTAAAGAATTATTCGAGAATAAAGAACCGTA
CAGTTTTCTTCAATACTCACTTTATAAGATTGGAGAAGTGAGCAAAGCAC
TTGCTGCAGCATACACTCATTTCGAAGCCAACCCATCCAATGAATTGATG
AAAGAAAATATAGAAATTTTAATGTCAAAACAGAACAAAGATTGGGCAGA
TTTGACGTCATTAGAAGAACCACCCCATATATCTTTGTACAAGAAAGGTG
AGAAAGCATACACCGATAGCGACTTCAAACAATGTATCTCGACTTTCGAA
GAATCTTTAACACTTTTCTACAAAGAACTTGCCAAGTGTAACGCAGTATG
TGAAGAACAAGATACGACAAAAGAAGTCTCCTACACAGCCTCTCTATTCA
AACACTTTCAAGGCATTTTGGCGTGCCGTAAAAAATGTCAAGTAGCGTTA
ACCAAAGTTGATGGAGAATCATCCAGAACGCATTTTGTGCCACAATATTT
TCATTACCTACAATACTGCTACTTTCAAGAAAACAATCTGATAGAAGCAA
CGAACGCAGCAGAGAGCTATCTACTCATGATTCCCAGTGATCCTGTTATG
TCAAAGAATCTCTACTGGTACCAAAATCAACCAGCTGTCAAAGGAAAAGC
TGTTGGCCCAAGACCAAGAGCGAAGAAATACATGAAACAGTTCGCAATCG
AATTGAATTTGGCGCAAAT
Run BLAST on NCBI

transcript from alignment at scaffold_57:210447..222783+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070627 ID=TCONS_00070627|Name=TCONS_00070627|organism=Clytia hemisphaerica|type=transcript|length=12337bp|location=Sequence derived from alignment at scaffold_57:210447..222783+ (Clytia hemisphaerica)
ATCCATTTTGTCTTTCTAGTTTTACAGAAGGTCTTTGTGGCCATCTGAAC
ATCGCTTTCATCAAGCACTCCTTATAATATTTTCTAATTCAAACAGttgt
aattttcttctttttttagaaccaaatggaaaaaataaattaaatttttc
aaaaaacataatTATACTTATACAAATTTACACACGTATAACGATGAAGA
ACCTTGTCATATGTTTGGTTTTCAAAGTGTACCTTATAACTATCGTGTTT
TCAGAACACATAGAAAATTATGATGACAAGCCTGCATATGATGAACTGTA
TCAATCAGGAAGGACATCTTATGATAATGACAATCATTTAGAAGCTGTAT
CATTCTTTGAAAAAGCAATAGCAGATTACCGCCATGAGCAAGAAGTTAAA
GGACAATGCTGGTTACGTTGTCAAGACTCTATTAAAGATACGCAGAGTGT
TTATTCAACTTTAATTGATGGTCAACTGAATTTCTTACATTATGTTATCA
AGACAAGATCATGTTTTCAACTTtgcaaagaaaagtttttgggcAGAAGA
GGACGGATTGCAAAATATGTTAAAGAATTATTCGAGAATAAAGAACCGTA
CAGTTTTCTTCAATACTCACTTTATAAGGTATACCTTCTCAAAAATTTAA
TAGGCTGTTCCGTTACAAATCTATACACAGGAATTTGGACCAACCTATTC
AAGTCAAAAAGATATTCatggaaatgtgtggataccctgTAAAATTAGCA
AAGAAACCCTGGAAACCCTTTAAGTATTTTTCATGCTTAAAGTGATGGTG
AAGAAACTAAAATCAGTGCTTTAttccctggaaattttagaataactttt
taccccctgaaaaatgaaaCGACACTCCTTTAACCCCCctcccctggaaa
ttcttcccAGACATTCCCCCCTTTAAATGTTTacccaccccctgtatgga
tatacaatggaatggcccaatcttGTTTTAATATTTGTGCAAATTTTTAA
GGCAGTAACTACTTAAATCGGATACACCTACCAACCCTTAGCGGTGCAGG
CGGCTTTTTAGGGGACTGGTAATATATTTACAAGAAACATTAGTTCTCGG
TGCACGGCATTTTTAGGCTACAACTAAATCAAACCAAGCAAAtatttaca
ttaatttattgCTTTAATAATGCAAGGGTATCTTACATATTCCACAAGAG
AACTCCTACACTTGTGCTTTCGATTACCATCATCgagaagaattttttat
tttcgttacCAGTCTCCTCAAAAGCGTTAAGGGTTGGTGTATTCAAAGTT
CTTTGTGAAAGGGTTCGAAAAGTTATACCTATCTGTGTAAAAATTAAGGG
ACTTGAAAGGGCTAACTCTCTATTTTTTGTGTTcctatagataaaaaaaa
tatccATCAAAGGGAATAGGGTTCAAAGAACAGCATCATAGGACCATTCC
GAAAAAACACCTTCAATTGTAAATAATTTACGCCCAATTAAGTTCGTAGC
GCTCACATGCTACGANAAAGATACGCAGAGTGTTTATTCAACTTTAATTG
ATGGTCAACTGAATTTCTTACATTATGTTATCAAGACAAGATCATGTTTT
CAACTTTGtaaagaaaagtttttgggcAGAAGAGGACGGATTGCAAAATA
TGTTAAAGAATTATTCGAGAATAAAGAACCGTACAGTTTTCTTCAATACT
CACTATATAAGGTATACCTTCTTAAAAATTTAATAGGCTGTTCCGTTACA
AATCTATACACAGGAATTTGGACCAACCTATTCAAGTCAAAAAGATATTC
atggaaatgtgtggataccctgTAAAATTAGCAAAGAAACCCTGGAAACC
CTTTAAGTATTTTTCATGCTTAAAGTGATGGTGAAGAAACTAAAATCAGT
GCTTTAttccctggaaattttagaataactttttaccccctgaaaaatga
aaCGACACTCCTTTAACCCCCctcccctggaaattcttcccAGACGTTGC
CCCCTTTAAATGTTTacccaccccctgtatggatatacaATGAAATGGCC
CAATCTTGTTTTAACATTCGTGCAAATTTTTAAGGTAGTAACTACTTAAA
TCGGATACACCTACCAACCCTTAGCGGTGCAGTCAGCTTTTTAGGggact
ggtaatgaatttacaagaAACATTAGTTCTCAGTGCACGGCATTTTTAGG
CTACAACTAAATCAAACCAAGCAAAtatttacattaatttattgCTTTAA
TAATGCAAGGGTATCTTACATATTCCACAAGAGAACTCCTACACTTGTGC
TTTCGATTACCATCATCgagaagaattttttattttcgttacCAGTCTCC
TCAAAAGCGTTAAGGGTTGGTGTATTCAAAGTTCTTTGTGAAAGGGTTCG
AAAAGTTATACCTATCTGTGTAAAAATTAAGGGACTTGAGAGGGCTAACT
CTCTATTTTTTTGTGTTTCTATAGGTAAAAACAATATCCATCAAAGGGAA
TAGGGCTCAAAAAACAGCATCATAGGACCATTCCGAAAAAACACCTTCAA
TTGTAAATAGTTTACGCCCAATTAAGTTCGTAGCGCTCACATGCTACGGT
TCTGTTTCGCTCAGAAACGAAACGaagtcattctattggttaaatacAAG
TTTTACGTCGCTTGTAaacaatagaatggcttcatttcgtttcggagcga
aacagaaccgtcacgtgcgaacataaTCTACTATGAGTGTTATTACTGGT
GGTCAAAAGTCAAATAAGTGCGTGGCATAACGTACAAATTGCTCTGAAAT
GGCTGTACAGtggagtcttcataactcgaacactcgcgataagcacaaat
ttgttcgagttatggagtaagatttATAAGGCATTATTAACTGAAGAGAC
AAGATAACTtgttcgagttgtagaggttctagttatggagactccgttgt
ataattttatattttgcttttattttagATTGGAGAAGTGAGCAAAGCAC
TTGCTGCAGCATACACTCATTTCGAAGCCAACCCATCCAATGAATTGATG
AAAGAAAATATAGAAATTTTAATGTCAAAACAGAACAAAGATTGGGCAGA
TTTGACGTCATTAGAAGAACCACCCCATATATCTTTGTACAAGAAAGGTT
GGTGTGTCATCTTTATATTATTTCCATCACGAAAACATATATTTTGTTTC
TAGTTTGCTTGACGAAATGCAAAATTCGAATGTTCTGAAATTTAGACGTT
CGAAAATCTGATGAATctgaagaaaaaacaacatgACGGACTAGTCAATT
TAAAAACTGGACACCCGTCCACGAAAACAGATATATTCTTTCACGTTAGA
TAcacaatcttttttataagcaactccaatttacGATACAGGGCTgaggt
tgcttagcattctagctcagtttctgaaaaatttgctttttgaTCATCCC
TCATATTATACCATATCTctgcttattgggtcaagggctacCGTTTGTCa
tggttagattatctaaaaaactttttctttaggCTAATTTTCAGTGCTCG
AGGTTGGCAACCCGGTTGcttgtaaagaaaaaactgtATAGGCTAACTAG
TTACAGACTTCCTGTGGAATGGTCTCCTGTTTTTAAATTTACAAGTCCGC
CATGTTGTTTTTGgacccggtggaggttctataaattaacccatgtccgt
tcgtccgttcgtccgttcgttcgtccgtctgttaccagcttttctcagga
ttggctcattagttttttctgattttttgcacaatgatgcaaaatggcaa
tgtccaGAACgcgacggagcccgatttttaagaaaaaatttatttgggca
aatttgggccaaaaactacctaaaaataggcttttttggactttgtgcaa
aatcctgtcattacttttttctgattttttgtacaaagatggagggcaag
attctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNactcattatttttttctgatt
ttttgcacaatgatgcaaaatggcaatgcctaaaatgtttcggagcccga
ttttcgaaaaaaaatatatttgggcaaatttgggccgaaaactgcctaaa
aatagggttttttggactttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattccct
ttaaccaaataagaaaatatagcttttctcaaagttgactcattattttt
ttctgattttttgcacaatgatgcaaaatggcaatgcctaaaatttgacg
gagccagatttttgaagaaaaaaaatatttgggcaaatttgggccaaaaa
ctgcctaaaatagggttttttggactttgtgcaaaatcctgtcattactt
ttttctgattttttgtacaaattgggcctgaatggtttaagtgattttcg
tatttggggaaattcctttttaccattttacattattgaacacacaagct
ttactgtatttttccattctgaatttttgtacaattattgtcactttttt
cttattttcatctgatgttaatcattaggtaggtccattcagcatgttgc
ttgtttctttTACGTCAGATTTTCGAATGTTCAAACGTCTGCTTGAAACA
AAATTATGGACTAGTTGGCTATAAAGCTGGCCACACTTCCGCTATTGTAG
GATCATGTCAAAAAGTCAGAGATAAGTGATCTCGGTGTCTTAAAGACAAC
TTATAGTGTCATAATATCCGACAGATGCATAGCAGTTTTTAGGAGAAGGA
GAGTGAGTGATTTTGGTTCTCATGGTTATCCCGATTTTTTATTGGCTGGC
TTTCCATCTGTATcttgtatttattttttcgaTCATTATGGATTATCATT
ATGTTGATCTGCTTAATCACCAGCCTACTTTCTGTTACATTTCTTTGTTG
TTAGGGCTGTCCTTGTCTGTAAACAGACCTCCTATATACACCGTACTTTA
TACGTGAGATTGTTGTACAAAGTCTTTGTCTAAAACCCATTCTTAACTTC
AGTTGAGTAAaattctgtctgtctgtctgtctgtctgtctgtctgtctgt
ctgtctgtctgtctgtctgtctttaGATATTTGGATGTATCTTGGATGTA
TTTCAGATGTATCCGACAAAATTCattctttgattgatttttcaattttt
ttcattgtacAGATTGTATTTTGTTAGTTCGTTGCTTTAAAAATTGTGCT
TTTGTCAATAAGTCCTTATGTCTCACTACGGATTGCATGGATTTTATCAG
TCGTTGTCGAGACAGCTACCTGAAAATGAAAGGTTTTAGGTCCGTGTGCA
AATTATTTTCCAATCTCTAATCCTGTCAATATTTATTAGTGTAGTGACAA
ATTAGCTTTTTTGCAAGTTCGGACATGAAAGTCTAGTTGACGtcggtaaa
agaaaaaaacatatgcttattcagatttcattttctttcaaattgaatAT
TACAGTAAAATACATTTTAACAGTTTATAAGCTATGGTGGCCGAGAAGGG
GCAGCTCTCTAAATCATTCTTATGTTCCCTTTAGGACACCTTTAAAGTTG
ACTCCCAGTTAACTAAACATTCGATTTCCGCTAAAAGAGTTTTTTAATAT
AGTTCTTCTGGAACTGAAAGTCGCTAATGTATTGAAAAACTGTCCCTTAT
CAGAATGCCACAAGTTATAACAAATTCTTTGGTATACCAATTTGACTTGG
AGTTAActtaaaaatttattgataaaccTCCGTTCAAAGAAACGTTAAAT
TTTGGTAACCTTGGTAACGCACTTTATTTCTTAACCCCATAACAGGTTAT
CCATTCTACATACGCTACACTCTGCTTTTAAGAGATATAGCGTCTTGGTC
GTTCAGCCGAAACATTCAAAACCGCGTTgcatttttcttgaaatctgAAG
CTTTCACTTTCGGCTGGTTAATGGTTATGATTGACCGTTGATTTTTTGCG
CGATTGTTTTGATAAGCCAATCACCGCGTTCAAATGCTTATATAATATAT
TCATCCCAAAAATGGATATAAAAGATCAAAGTGGTCCACCAACCTGACAT
GATTTTGTGAAGTGAGTATGTGTCATGCGTGGAGTAATCAGAATCTACTC
GGAGACTACTAAATtctaaatgtaaaaaaattaaatggcGATCAAAATCC
AATCAAAATAAAAGACTGATCCATAACAATGTTAGGTCTAATAGTGGTAa
agcatagatttataaagcctgaagggctagatggcgtgcttcGGCTGAAA
AATATGctgtggttaggtaggaaatcctacctaggtcacgtgacattaca
atagaatttcagcgctggaccaatcagaagcttcgcgggttttcgagaac
aatagcaacaatattttttccgatattcaattttgtttgcctgcgatggc
ttaaagcacgacatctagcatTATAAATCCGTGGGTAAAAACTAGACTCA
TTAAAGAGGGTTTGGCCATTTCGTAATCTGGACAGCATTAGCAGATTTAT
CAGTCACCATCACTCCTCCACTAGCACCACGGTCAAATTTCTTGCTATTA
TGACCAGGGCATATAGGTAGGATATACCACCATTGGTCGGGATTTGCAAG
CTCCATATGCCCACCAAGCAAGGTTAAGGGGGTAGTATGTTTTTGGTGTG
GTGCGCTATCAGGGCTATTGATGTAGCAGATGGTAGCCATTTTATTGAAt
gctttttgccaaaaattgaTCCAAGGTGCTCCTCGTTTGTCTACCGCAGA
ACCGTTGACATTGTATACTTTCAAACCACCAAAACCAACCTTTGTACCTG
GTGGTGATATTAAAAAATTGTAGTACTTTTCCAAAGATTAATTCTGTATG
TGAGACCGTTGTGCAAAGGTAGAGCATTCAGCTACGGCGCACAAGGTTGT
GAGTTCAATCCCCGGCCTGGTCATACTAAAGATCCTAAAATTGTACCGTC
GTTTTGTATTagtttcccatttccgcactaagattcctttgtcatttttc
tagcgaaaaaagaccaggacttcggttagttgaaaaatgagcttcggaaa
gttaggcagtttcaCGAACAAACAtaagattttccgtacctttagaaaca
aaccctGTCCAATCTCATGCCGGTTATCCAGGAAAGAAATAGCGGAAAAA
TTtcggaaaagtgacaagaatcttagtgcggaaatagGAATCTTATACAG
AACGACGGTACTTGATGCTTATCAAGGGTAAAGTGGAAagatccagggag
aaagagggGCACCCTCCCCTaacttcgggtagatagctatcgaaagaaaa
GCCTTCGGATCACATCCGACTGCGGCCGCAGACTTAATACTTTTCATCTA
GTTCTTTTCCTTTCGCTATTTCCTTCTGAAACAGAATACCAAAAGAAATA
TCAAGCTTTGCTTCAGACTTTTGCATAAATGAAAGATCAACTAACCTTTA
GAAACGAAATAATTTCCAGCAGCATCAAACGACACGTCCATTTCTATCGG
ATCATTGAATTTCGCGAACATTTCGTGCGCCTCTGgatctttttctctca
aacTATTCAAAACGTGTTCAGGAATAATTGCTGCGTTTCTAATCTCACCA
CCATGTTGTACAAACAGCATCTTAAATGGCACATCCACGGGTATACTTTC
CAAGTCTTCAGCAAATTTTCTATGAAAATCTCTTGCCGGCGACAAAAGCT
CACTTGCTTCTCGAACAGGTTCTGGCCCTGTCGACAAAAGCTCTTTTAGG
GTTATTTTTGCGTCTTTTATATCCATGCTACCTCTACTGTTTAGTATCAC
AAATATGATTTCTTGTTGGTTTTCGTTTACCTTTTTATACACTTTTTAAC
ATAATGTGTACCATCTACTATAAACATTATAAAGATCTTTTTGTAGACAT
TCCTGAACAATACTATGACGTCTTTAGAAgctgaatttgacaaaaatgac
TGCTCCTAAAACAATTTCTAAGAAACGATTACttagtaaaatatttcttg
ttcTGACTTAAAAGAATTGAcgtctttacaattttcaagctaaaacttga
aGAAACTTACGATTATATCTGAAACATTCCAAATAATTAGCCGCAAACCC
TATTCTTATCTGATGATGCTCCGATGGCGGGTtttcggccgcccacgcta
aagctctaaagaagcGGCCCGATTTCACGTCGGAAACACAGATAGGGACG
gaatataagatatctgtggtcgGAAAGGAATGAAAGTTGGGAATATGGTg
tcccgctgcaaaatcctcGACGCGGTCTAGCGAAATTCTGAAGATTCATT
TTCCTGGGcgttattttattattatttgtttGTGCTAGACTAGTAGATTT
CTTTTGCTTTCATGTCTCATAGAGTGAGTGACATTTTTAAGAATCAAATT
ATGAAAGCTCTAGTGTGCCGTCTGCAAAGTTTTGTATGTGTAATTTGGCA
GCAGTCAGAAGTATCAATGCTCATCCTTATCTTCTATAGGCATAAGATAA
GTACATCTACGCACTGCATAATAATCACATGACCTAATTATTTTAAACGT
TGGCTCTAAGCTTAACTCCACTATTTACTATATTTCCACATTTTACTATT
TGTAGGTTTAAAAAGAGTTGACTTagccttttttctttttttgctagCAA
TCCTCTGTATGTGGGCCAAGGCGTTTTCATCCTTTGACTCTATGTACAAT
TATGCTAAGTTACCTTTCCCCGTTTCTAAAAGAGGAAATTTAGGTACTTT
AGTCATCATTGAGTTAACCTTATAACAGTTCATCTATTCTAACTAAGGGA
TGGGGTCAATGAGGTATAGCCGGCATGGTGGATTAAATCTACCGCTAATT
AgtgctttgtttttgtttttttttacatttttcgaattctttGTAAATAT
GCTATAATTAGCCCCATTACATCTCCTCTTTTCGAAAAGTTAGACATGAG
TTAGACATTTCGGTCAACATTCGAGGTAGAcaatcctatcgtctacacaa
gatcactaaaaaaaggGAATACTTTAGGAGGCGTGATAGATTCGGGCGGA
GTAAGCCCGgggcggaggtgtttacagtgtaCGTTAGTTCCAAACTCTAC
CTCCACTTTTTTTCTCGTAAACCACCCTGACGCCCTGACTATACGCTTAT
ATATTTTCCCGCGGTTACTGATCCTCtaaaacggacgatagcatcgtcaa
CATTCGAGGTCACTTTCAAAGCTTGATTTCTCCAATGGGGAGCGCTAATA
TCACATCATATCATTATTATAGTTCATACAAACTAAAGTAACATTGTCCC
GTAACagttatcgtattatcatataacacatATATTACTGTATAACACGT
ATTAGGTAATACGACTCCAGCCTCTAATATAACATTTTTAACGAAAGCGA
CttggttctaatgtttatgtttatgattgGCTTTTGACTTACCAAATGGG
AAAAGCTCGTATCACATCATATCATTATTATAGTACATACGAATTAAAGT
AACATCGTCCCGTAACagttatcgtattatcatataacacatATATTACT
GAATAACACGTATAATacgattagtactagtaataacatggtttggaggg
tgatttggttctaatgtttatgtttatgattgGCTTTTGACTTACCAAAT
GGGAAAAGCTCGTATCACATCATATCATTATTATAGTTCATACAAACTAA
AGTAACATCGTCTCGTAACagttatcgtattatcatataacacatATATT
ACTGTATAACACGTATTAGGTAATACGACTCCAGCCTCTAATATAACATT
TTTAACGAAAGCGACttggttctaatgtttatgtttatgattgGCTTTTG
ACTTCCCAAATGGGAAAAGCTCGTATCACATCATATCATTATTACAGCTC
ATACGAACTAAAGTAACATCGTCCCAGTTATCGTATTATCGTATAACACA
TATATTACTGTATAACACGTATAATacgattagtactagtaataacatgg
tttggagggtgatttgggaaTAATAgtcccgaggttcattgaaaacattt
caaaattggCTGAACGTAGTGAAGtcgaagattttctttttctctatttt
cgCGGGGTGATTACAGCAGGGCTATTACGGATTAATCACCCCGCTCCTCC
CTTACAATTCTAAGCTAAATGTTATCAGTCTAGACTTCAGTCTAGAATAC
AACGTTTAAAAAATCCTATTCTCTCTTCCACCTTCAGGTGAGAAAGCATA
CACCGATAGCGACTTCAAACAATGTATCTCGACTTTCGAAGAATCTTTAA
CACTTTTCTACAAAGAACTTGCCAAGTGTAACGCAGTATGTGAAGAACAA
GATACGACAAAAGAAGTCTCCTACACAGCCTCTCTATTCAAACACTTTCA
AGGCATTTTGGCGTGCCGTAAAAAATGTCAAGTAGCGTTAACCAAAGTTG
ATGGAGAATCATCCAGAACGCATTTTGTGCCACAATATTTTCATTACCTA
CAATACTGCTACTTTCAAGGTAAGGATCTACGAAATTGTCAacctttttg
gaatttttggaatTGTTTGGGATGGTTATTTTTCTACGTTCTTTATATCA
ACCCCCGGTGGTAAATATTGAGTTGGTTagaaaaaaggtaaaatattgAT
ACGTTATATCTTCAATAATGttaccgtattactttgaataaactaTTCGA
CTTTGAGGAACACTTTTCAATAAACGAGTTTCGAGTTTATTTGAACAAGT
AGCTGCAAGGAGATACCCCATATGATAATAATTGTattattttagtattt
gaactgattttgacccctaaattgacTTATTTGTACTCAAATAATAACAT
AAAGGCCAAACAAGGTTcacgttttcttttataaaatgacCTTGggtaaa
aattatttaataaacgttCATACGGTAATAGATATTAATAAATTATTTCG
CCATTTCCCTAAAAGATTACACAGtgacgctctttaattcgattttcaag
gggaattcaatttttatcgaataagggagcgtatcgtaGAACGTCGAGTT
GGAGAGCGTGAACTTTAATTACTATTTGTTCTGGGGGTATAACCAATACT
TCGTCGTTTGACTATTTTGAACGCAGAAAATTTATTTACTCTATTTAGAA
AACAATCTGATAGAAGCAACGAACGCAGCAGAGAGCTATCTACTCATGAT
TCCCAGTGATCCTGTTATGTCAAAGAATCTCTACTGGTACCAAAATCAAC
CAGCTGTCAAAGGAAAAGCTGTTGGCCCAAGACCAGTAAGCTTTGTTTTG
GATACGAAAATATTCATTAGGTTTCACTTATTTTGTATTATTTCTCTAGC
GGCTGTCGGTGGAGCCAGGAGTGaattctatttgcgctagacctgggaga
tcgaattcTAAAGCTGAGCAGCACACCTTCTTTCACTTTCAGCTCCCTGT
TATTTACCGCCTAGATCGTACTCAATCTGAGTTACTTATTCGCTGAGTTC
GCAGtggaccggggatcgaacccacaacccttaggattataaggcgaatg
ctctaccgactgagctaaccggccacAATGTGGAACCTTAGCTCTAGTTT
GGCTATTCTAATAACTCTATCTAAGGCAGATAGTTGGCTGTCTAAAGCCG
Atacattgccctcttttgacgtcaacatgcaatgtcttctttcaatcttt
tgcaagcaaagattttaactgccaactttgcgCCCAGTGTTCGCCTACTC
AAATAATTAGAAGAGGCAGGACAGAAAGTCGACTAGTTTAGACTGGTGCT
TATATTCGATGAAATGCGTTTGTTTCACTTATAGAGAGCGAAGAAATACA
TGAAACAGTTCGCAATCGAATTGAATTTGGCGCAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043945XLOC_043945Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070627-exon-scaffold_57-1491911889:210447..211074TCONS_00070627-exon-scaffold_57-1491911889:210447..211074Clytia hemisphaericaexon
TCONS_00070627-exon-scaffold_57-1510915933:210447..211074TCONS_00070627-exon-scaffold_57-1510915933:210447..211074Clytia hemisphaericaexon
TCONS_00070627-exon-scaffold_57-1575043694:210447..211074TCONS_00070627-exon-scaffold_57-1575043694:210447..211074Clytia hemisphaericaexon
TCONS_00070627-exon-scaffold_57-1491911889:213425..213593TCONS_00070627-exon-scaffold_57-1491911889:213425..213593Clytia hemisphaericaexon
TCONS_00070627-exon-scaffold_57-1510915933:213425..213593TCONS_00070627-exon-scaffold_57-1510915933:213425..213593Clytia hemisphaericaexon
TCONS_00070627-exon-scaffold_57-1575043694:213425..213593TCONS_00070627-exon-scaffold_57-1575043694:213425..213593Clytia hemisphaericaexon
TCONS_00070627-exon-scaffold_57-1491911889:221134..221415TCONS_00070627-exon-scaffold_57-1491911889:221134..221415Clytia hemisphaericaexon
TCONS_00070627-exon-scaffold_57-1510915933:221134..221415TCONS_00070627-exon-scaffold_57-1510915933:221134..221415Clytia hemisphaericaexon
TCONS_00070627-exon-scaffold_57-1575043694:221134..221415TCONS_00070627-exon-scaffold_57-1575043694:221134..221415Clytia hemisphaericaexon
TCONS_00070627-exon-scaffold_57-1491911889:222045..222181TCONS_00070627-exon-scaffold_57-1491911889:222045..222181Clytia hemisphaericaexon
TCONS_00070627-exon-scaffold_57-1510915933:222045..222181TCONS_00070627-exon-scaffold_57-1510915933:222045..222181Clytia hemisphaericaexon
TCONS_00070627-exon-scaffold_57-1575043694:222045..222181TCONS_00070627-exon-scaffold_57-1575043694:222045..222181Clytia hemisphaericaexon
TCONS_00070627-exon-scaffold_57-1491911889:222731..222783TCONS_00070627-exon-scaffold_57-1491911889:222731..222783Clytia hemisphaericaexon
TCONS_00070627-exon-scaffold_57-1510915933:222731..222783TCONS_00070627-exon-scaffold_57-1510915933:222731..222783Clytia hemisphaericaexon
TCONS_00070627-exon-scaffold_57-1575043694:222731..222783TCONS_00070627-exon-scaffold_57-1575043694:222731..222783Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:210447..222783 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.827697	1.70398	0.892549	0	0.437368	0.00143686	6.46052	0.330576	0.230942	0.00640429	4.28395	0	2.71384e-06	0.249472	3.40858	2.444	5.87531	5.98636	4.99066e-06	0.296414	0.767826	2.54503	3.2033	2.62662	1.62949e-07	3.06933	0.815311	1.04727	7.01867	6.59437
Blast
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BLAST of TCONS_00070627 vs. Swiss-Prot (Human)
Match: P3H2 (Prolyl 3-hydroxylase 2 OS=Homo sapiens GN=P3H2 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 8.100e-36
Identity = 85/308 (27.60%), Postives = 154/308 (50.00%), Query Frame = 2 
Query:  287 YDELYQSGRTSYDNDNHLEAVSFFEKAIADYRHEQEVKGQCWLRCQDSIKDTQSVYSTLIDGQLNFLHYVIKTRSCFQLCKEKFLG---RRGRIAKYVKELFENKEPYSFLQYSLYKIGEVSKALAAAYTHFEANPSNELMKENIEILMSKQNKDWADLTSLEEPPHISLYKKGEKAYTDSDFKQCISTFEESLTLFYKELAKCNAVCEEQDTTKE---VSYTASLFK----HFQGILACRKKCQVALTKVDGE-SSRTHFVPQYFHYLQYCYFQENNLIEATNAAESYLLMIPSDPVMSKNLYWYQN 1177
            +D LY SG  +Y + ++  AV   E A+  +R  +E++ +C   C                 +L     ++    C++ C+ + LG    R R+++ V+  F+ + PY++LQ +  K+ ++ KA+ AA+T F ANP +  M++NIE   +    +   L   E  PH+  Y  G K Y   DF+  I  FE++L  ++ E  +C  +CE     +E   + Y A L++    H+  +L C+ +C   L    G  S   +F+P ++ YLQ+ Y++    ++A   A++YLL  P D  +  N+ +Y++
Sbjct:   44 FDLLYASGAAAYYSGDYERAVRDLEAALRSHRRLREIRTRCARHCAARHPLPPPPPGEGPGAELPLFRSLLGRARCYRSCETQRLGGPASRHRVSEDVRSDFQRRVPYNYLQRAYIKLNQLEKAVEAAHTFFVANPEHMEMQQNIENYRATAGVEALQLVDREAKPHMESYNAGVKHYEADDFEMAIRHFEQALREYFVEDTECRTLCEGPQRFEEYEYLGYKAGLYEAIADHYMQVLVCQHECVRELATRPGRLSPIENFLPLHYDYLQFAYYRVGEYVKALECAKAYLLCHPDDEDVLDNVDYYES 351
The following BLAST results are available for this feature:
BLAST of TCONS_00070627 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
P3H28.100e-3627.60Prolyl 3-hydroxylase 2 OS=Homo sapiens GN=P3H2 PE=... [more]
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