TCONS_00070617 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070617
Unique NameTCONS_00070617
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3238

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070617 ID=TCONS_00070617|Name=TCONS_00070617|organism=Clytia hemisphaerica|type=transcript|length=3238bp
CGAAGAAAGTTACAAATGGTAGGAAGtttgaacagaaaaaaaaaatcaaa
aaaaaaacacaaaaagagGCCGCACTGCTACATCAACACGATGATTACAT
AAGCAAACAGATTTTTGACAAACCTTCGTATTTTTTTTTACcggattttt
ctttttggtttccAAAAAGATGTAGCTGATTTTATATAAGcatgaaactt
ttttttcgtgCTCTTTTGTTCCTGAGCTTGATCACAATACTTCAATGCAG
GGATGGAGGATACCCGTATAATGCGTATGACGAATATCTAGaactcGCAA
CTACGTCCAAGCCTGAGTCGTCGGGAATGGCGAAAAGAATTTTGATTCCC
GTGCAGATTATTCTGGTGGGGGCAATTGCTTCATTCGTTCTTTATCGGAA
ATGTCGGTAtCCAGACCTTGGTTTATTTGAGTTTAACAAAAAGCCGCTGG
AAGGCTTCACGAATGCTCGCGATGATACCAAAAAGCCGTATGTAGAGCTC
TCAGAAACGATGAGCTCCCCATCTATGACGTTGACATGCCCTCAAGTCAA
AGATCAAATTTGGACGAAAGAGGCCGAGAGGCATTTCTTACCGCCGACTC
GTGAGGATTTTTATGAATCGCCGCAGGATGATGAATATTTAGAACCCGTC
GTGGACAACGTGGAATCGCACGAGTATGTCTCCATAGAAATGGATGATCC
TTTTATACAACAGCGGAATAATAAAGATATTCCGGATGTAGAGAATCTAC
GGATAGACCCGGTTAAGCGGTACGTCGAGCCATATGAAGAAGATAGGCGA
CAAACCAATGGTTATTCACCTGGTTACGATTGTTACTATGACAACGTTGA
TCATATTTTGAGTAACCATGAACAAATGAACAACAGACAGGCGGTGGTGG
AGGAGGAAGGAGACTACACAAACCTAACGAACAATAATACTTATAACGAC
GATGACGCATACGAAACACTTGATTCTGTGCGCTCTGTCCGATCAATTGA
AGCTGCTCGATCAATTGAAGCTGTCCAATCAGAAAACATCTACGAAGAAA
TCAACCCAGGGTTGCCAAATACTGAACCTGACCCTACGTTACCTTTCCCG
CTCTTTTTTGCGCTCGCCGCTTACCGATTCAAAAACGCGGCACTGCGTAC
AAAAGAAGAGTTGGAGCAACGAATGTTCGGTACCGTAAAAACATCTCAAG
ATGAAGCCGAAGACGATAATGCTTATACTAATATCAATCCATTGCCAGAT
GTCGCGAAAATCAAAGCCAAATATCGTAGTAACGAACCCGGTAGTCGGGT
GCCTGTCCCTGCGATTAATAAGAATCGAGGAAATAGTAATGTCTTTGATG
CTTATAGTAATGTTATCGATTCATTAACAGCTAAAGCTGAAAAGCTCTCT
AATCAAGGTAGTAATCAAGTATCATCTCGTACAAGgagtaaaacaaagaa
aatgaaaagtgtagATGGCTCCTTCGACCAAACAATACCAAAAGAAAACT
CACGATCTAGGAAGAAAACAAATCCGTCTTCCAACCCACAAGATAATCCG
GAAACCCGATCTTCTCCTAGTTCCGGTAAACGGAAACCGCCCCAAGGACA
AGATTCCGTTCTAGAAAATAAATCAGCTCCGGGTAGAAGGAAACCACCTG
ACTCTTCCCAGCCTCCAGCCATAGCTGGAAACAGATCTGGATCCTCTCCT
ACCAGGAAGAAAGGTAGGGACCCACAACCAAAGAGGAACTCCATGTCGGA
AGATGAAGGGCGTTCACTTTCTCTGGTGTCCAGTCCACCAGAGAAACCAA
AGTCTACTGAGACAAACAACAAGAAAATGCAGCAGCCAATCAAAACGCTA
GCACCTTCATCCAGTGAGGACGATGCTTGTGAGAACGTTGAAAATACGTC
ATCAGTTGATTCCATACCGCAACGTCTTCAAATCAATCCAAAATTAACAA
GCTACCTACCCTTCGGTCAAGACCGCACACACAATGAATTATTAGAGAAC
AGTAAATGGAAGGCTGTTCAGGATGCATTACATCATCATTCGCCAATTTT
TCCTCCAATCAAATTGGTTGAACGACAAGAATCGAATTCTGATTGGTCAA
CTAATTCAAAGGATGATCTTTTGGAGAAAGAACGTCAATATAGGATTGCT
AGACGCGTTATTGCACAATTTCAAAATTCTGCAATGCCTTTGGGTGAGAA
AGATAGTGATTTGTCATCTGCTGAGTCTCTTCATTTAGAAGAAATGTTAG
AGACAGAACAAAAACGTCGTATGACTCTCACAAATGAATTGTTAGAACAA
ACATTATCTGAAGTTAAAAAGAAACGGCGTGGTTCCATCAAGGAGAAACT
AAAAAACATTTCCCCATTCAAAAGAGACAAGAATAAAGATAAAGACAAAA
TAGCTGCAGCCAGCTCATCGACAGAATCCAAATGGTCCCTAAATAGAAGg
cgCTGGAAATCTCCAACCAAAGAAACATCGCCGAAAGTCGAAAAAGAAAC
GTCCAAAAGTagtaaaaagagtaaaaaaactaaattcgGTAAAAAGCAGA
AACAGCCCACTAATGAAGAGCCGTTAGACCCTCGTATGATTGGTATACCA
GTCTACACCCCTAAGTCANAAGAGCCGTTAGACCCTCGTATGATTGGTAT
ACCAGTCTACACGCCTAAGTCTCATGTGAGTTTCGATAAATTAGAAGAGA
ATTATAATTCAAAGAAGAGAGCGTCCGAGAGTGATTCTATTGGAAATGGA
GAACAAAGCTCAgGTTCAAATTACCGTGATCCGCCCGCCACACCCGCCAT
TGACAGAATATCAGAGGAAGAAAGCTGTGAGCCTGCTGCCCCTGCTCCAA
AGAGAAATCTGAAGAAAGAAATCTCTGACGCCCTAACGCCCAcaaaaaaa
tcgggaaaaaaatcaccgaaatttaaaaaaggaaagaagGGCGCTGTTGA
AGAACCACCGGAGCTGCCGCCCTCTAGAAATTCTAATGTCAATGCCGCCC
CAGGACCACCCCTTCCACCTAGAGGCTCTCAaccataaaataattttttt
actcccatttttgtaaatactttttaaataaattttcaaacagaGAAATA
CAAATCATTTATACAAAGATCTATATCTCCTCTCAGCTTGTGTAAATGAT
GGTGGTTTTTCtgtctgaaaatttattttgagtaactttttttaaattct
ttataACTTATTAAATTATATGAAATATATTTCTTcga
Run BLAST on NCBI

transcript from alignment at scaffold_57:123409..138161+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070617 ID=TCONS_00070617|Name=TCONS_00070617|organism=Clytia hemisphaerica|type=transcript|length=14753bp|location=Sequence derived from alignment at scaffold_57:123409..138161+ (Clytia hemisphaerica)
CGAAGAAAGTTACAAATGGTAGGAAGtttgaacagaaaaaaaaaatcaaa
aaaaaaacacaaaaagagGCCGCACTGCTACATCAACACGATGATTACAT
AAGCAAACAGATTTTTGACAAACCTTCGTATTTTTTTTTACcggattttt
ctttttggtttccAAAAAGATGTAGCTGATTTTATATAAGcatgaaactt
ttttttcgtgCTCTTTTGTTCCTGAGCTTGATCACAATACTTCAATGCAG
GGATGGAGGATACCCGTATAATGCGTATGACGAATATCTAGGTATGTATG
TTTTTGTTGTAAGTAACTAAGAAGGTAATTCTTGTAGAATTTATGCAAAT
GAatatatagaaatagaaatagttgAAAACATATATCCTCTCGTTTGATA
TTCTTTTAATTAGACTAGATTCACGGTTGAAAAAATTCGGTCGTATAAAT
TCATTTCACAGGaacttaaaataaaactttttctttcacttCCCTATGGT
TTAtgaaatcgtcgtttttgcgAGCTATGCAAAGTGTCGAAATTTATAAC
TCTGCTAAAATGTGATTCCCTTCATTATTTCAGGTTGACTctatattaaa
atatttttctttaggATTTGCGTTTTTTCTCGGAGTATGGATCCAGGCTT
AAGCGATGACTTAATGTGTCCCGAGAGTGCACTAATTtctctaaattttt
ttttttttttcagaactcGCAACTACGTCCAAGCCTGAGTCGTCGGGAAT
GGCGAAAAGAATTTTGATTCCCGTGCAGATTATTCTGGTGGGGGCAATTG
CTTCATTCGTTCTTTATCGGAAATGTCGGTAGTAAGTgtggttttttttt
atttctatttggttgagttgcaggaggctttagaggcctattctcgtaac
tatagacgcttactaatgagcgtcccgtcagcaccttgaactgactaccc
aattccccacacatggcatgggttgacctgagcgaaggaacgttcacttg
ccaagtgaactgccgtgagtgggaatcgaaccctggcctcctgcacagaa
gccaaggtcgactaccactataccatGGCACATTTATTTTACAGTTGAGc
ttcgctaattcgaacttgaaCGAGGAATCTAATTTGTTGGAACCACAGAA
AGATTCCAATACTAGAAAGCATTTTACGAAGGCTTCTTCTCGACGGGGAC
TGAAAATTAGTTCaatttatagaaagatttgaatgatagaatttcgaatt
agagagagtgcaCTGTATATATTAAAACCTTCACAGCTTTTGCCGTGCCA
GATTTCCTTCGAAATACGGAATTCGCTAAAATGGTCTCCAAAACTCATGT
TAAAAACATGAATGAAACTCCTGGCACTGTTcatccattaaaaaaaatac
atttataGTCTATATATTTTCTCAAACTTTGCTAAGACCAGAACTCTTCG
GCAATATTGACAAACAAACTGACATTCGACCGCATCTATCTTtatgtcaa
atattttttaagaataatttttagatttcattCGCTTTAAATCATAAATA
TTCCGTGCTACCATGTAGGAACCATGTCATCGTAATTCATTGCCCCCGTC
AACGgggggggccaggggggccatggcccccccaatattttgcaaagtat
tttttttttagtttgaaaaatcttatatataccgtttagaggggtgaaat
aagggcaaaaagtcgaaaattttcttcgtcgcccaaccatggtgggcgac
atatttttttggccccctcaattcgatgcgcacgccgggggccatNGATT
TCATTCGCTTTAAATCGTCAATATTCCGTGCTACCATGTAGGAACCATGT
CATCGTAATTTAGCCTAATTCCATTGAAAGTGATTCCATATggtagaaaa
aaagttaaaaaagagaGCAAATTTAAACCGAATGGactttgtttgtaatt
tttagtCCAGACCTTGGTTTATTTGAGTTTAACAAAAAGCCGCTGGAAGG
CTTCACGAATGCTCGCGATGATACCAAAAAGCCGTATGTAGAGCTCTCAG
AAACGATGAGCTCCCCATCTATGACGTTGACATGCCCTCAAGTCAAAGAT
CAAATTTGGACGAAAGAGGCCGAGAGGCATTTCTTACCGCCGACTCGTGA
GGATTTTTATGAATCGCCGCAGGATGATGAATATTTAGAACCCGTCGTGG
ACAACGTGGAATCGCACGAGTATGTCTCCATAGGTGAGTAAAACACACAT
TTTcttatatacacgtttttttataagaacaaactatataagaacatatg
acttcaatggccaaaatattaagaacaagttaagaacatctaaaggcttT
CAGGACTCTAAagcacccgatttcttaagaaaacggacaaaaaaacggtc
aaaaaattttagttgttcttataaaaaaacgtgtaccattTTGACAGACT
CGTGTCTTTCTCGACATATCCTCTTTAAGCGAGGTTATATTTATGCGCTC
TCATCCCCCCTTACAACATCGGCacttacactcttttttataagaaccag
tggAGAGtaggttgttcttatttttatggCAATCCCAACTTCAGTTCTTA
TCCTGTTATAATTTTAGTGCTAAACTGAGGTTTTTAAAGCTTTATACTAT
GTGATCCTTTGATTGCTTGAAACTCAGCGATTCCAGTCtcgacatttttt
ttaaattgtcctCATCTTTTGACGGTTTTTGAGCCTCTCcttgttcttat
gaaaatactcttttttttttaagagtgtATTGGTACAGATAAATATATTA
ATATTGATAAAGTATCAATGACACAAAGGATACAAATTGACTCCAATCAT
TGTTTTCACTTTGCTTTTTTTAGAAATGGATGATCCTTTTATACAACAGC
GGAATAATAAAGATATTCCGGATGTAGAGAATCTACGGATAGACCCGGTT
AAGCGGTACGTCGAGCCATATGAAGAAGATAGGCGACAAACCAATGGTTA
TTCACCTGGTTACGATTGTTACTATGACAACGTTGATCATATTTTGAGTA
ACCATGAACAAATGAACAACAGGTAATTAAAACAACTTTTCCGGGCGAAT
ATTGTTATTTACGATAGTCGAACTAGTTATCATAGTTGAACATATTTTGA
TTTGGGAGGTAGGATTTTCACACCCATATCCGCCTTGGATTTTTTCTATG
ACACTGTTGATCATGTTTCAATAATGAAAAAAACTAAGGTGCGGAACTTC
TTTGTCTGGACGATCGagcatcaaatttttcagggtGGTTTCCTTAAAGG
GGTGCTTTTATTGCGGTGCTCTTAAAAAGTGGTGCCCAAGCAAAGATAAG
TTGAGCgagcaaggttgtgggttcaattgAGTTTGCAGCGGGGCTAGAGA
TGGAGCAAGGTCATACAAATGATCGGAAAATGCTCTGTTAAATTATCAAC
AACTAAAGATAGGTCAACTGTAAAAGTACAAATCAATGGAAATGAGTGGT
GCCTTCCCCTACCTAGGCTTGGCTGCCATGTGTCCCTCCAATTTGTTTTG
TTAAACGGAAGCAAATAGGCCTAAAAAACGTCCGCTTTTTTGCTGAATAA
GTTTTATGAGATGGAACTTGTTGACCTCATTCAAATTTAGAGGAAAAGAA
TACTATGATACGGAAGGTGTATTCACATGCAGTAATGTGTGtttgaacag
aaaaaaaaaatgacgacttgaaaaatatttcagtctTGGAAATCTGCAAG
TCTAAAGCTTTTAATCTggttataagcgttatgctcaAATCAGCCCTCTA
ACTACTTGATTGAATCCGGCTACCAGTATATAGGAAGCTTGCCTAGGTTT
AGAGTTGACTAGTCCgtcatcttgttttcaattctggtcgCTAACAGCGT
GATTCGAATACAATGTAAATTAGAAAACAACATAACAGACTAGTCGATTT
TCACGGAAAATCTGCTAGAAATTAGCCTATATCTAttgtgtaaaagaata
tgatatcTAATATGATATATGTGGTTATGCTTGTAAAACAACATATTGGA
TATCAATTTTTATCTTCTAGACAGGCGGTGGTGGAGGAGGAAGGAGACTA
CACAAACCTAACGAACAATAATACTTATAACGACGATGACGCATACGAAA
CACTTGATTCTGTGCGCTCTGTCCGATCAATTGAAGCTGCTCGATCAATT
GAAGCTGTCCAATCAGAAAACATCTACGAAGAAATCAACCCAGGGTTGCC
AAATACTGAACCTGACCCTACGTTACCTTTCCCGCTCTTTTTTGCGCTCG
CCGCTTACCGATTCAAAAACGCGGCACTGCGTACAAAAGAAGAGTTGGAG
CAACGAATGTTCGGTACCGTAAAAACATCTCAAGATGAAGCCGAAGACGA
TAATGCTTATACTAATATCAATCCATTGCCAGATGTCGCGAAAATCAAAG
CCAAATATCGTAGTAACGAACCCGGTAGTCGGGTGCCTGTCCCTGCGATT
AATAAGAATCGAGGAAATAGTAATGTCTTTGATGCTTATAGTAATGTTAT
CGATTCATTAACAGCTAAAGCTGAAAAGCTCTCTAATCAAGGTAAGAATT
CTTTAAGGAAAGagcttttgaaatttattatACATGGTGCATATTAAATA
AACTATGCATCTTTGCATCATCAACTTTCACTAGCTTTGGTATACTacat
tttttggcattttgcgCTTCGTAAATAtcccatttctaaattttcccaGC
TTCTTTGGTTATTCATGCGTCCGAAGCATAAAAGTAGACATTCAGCTACG
GTGCACAAGGTTTTGGGTTCAATCTCagtcgggtcataccaaaggtTTCA
AAATAGGACTTGCTGCCGTTGTGCTTAATGCTCACAGCAATTGAAGagaa
tagcgagtttatgtatgtgtgtttttcagcgacggagacggtaaggttct
aatttgagtagatcctgaccagctgaggacgacggtaaatcagcactttt
accgtcctcgattttgcggggcggaattgcgggtttttctaaaccgcttc
agtcactctaccgtcctcaaaagtgcaaatacataaactcgctaatgtac
ATAGGTGTGTGGATCAGTCCAGTGGGAAGGGTGGAGCTATCGGGTCGCTA
TTCCGACTGCAATCGCTCTAATATGGTACAtttgagtctctataactcga
acacgcactggaaacacaaatatgttcaagttatggagtaaggtttataa
ggcattgcaAAATAAAGGGACCAAAAAACTTGTTCCAGTTACGGAGTcat
tcgagtaatagaggttcgagttaaagagactccacttcAATTTTTTATAG
GTAGTAATCAAGTATCATCTCGTACAAGgagtaaaacaaagaaaatgaaa
agtgtagATGGCTCCTTCGACCAAACAATACCAAAAGAAAACTCACGATC
TAGGAAGAAAACAAATCCGTCTTCCAACCCACAAGATAATCCGGAAACCC
GATCTTCTCCTAGTTCCGGTAAACGGAAACCGCCCCAAGGACAAGATTCC
GTTCTAGAAAATAAATCAGGTTTGTTTATTCAGTGtacaaagttcttccg
tctgaagcggatttccgtctcagcgAGGTACAAAAATAGGCTTGTCCGTC
TCCgaattcaacaaaattctgcaaaacatGAAGAATCTGGCCAGATTTGT
TGTTCAAAATCCAATTTTCCGCCTGAGGAGGTTTTACACAATGTTGAAAA
CTTCAAAGGATAAAAACTACTTTGACGGGGATTACATACTTTTGCAGGTA
ACAGTCAATGTTGACTGCTatgctcggctgttcttattttcgtgATTTCC
GGCTCAAGTGTTAAGATTCGCAAGCGGCTGCCTTCCTGAAGCACATAATC
TTAAAATGGTTCATAATTTAGTTTACTTATTGATTAAGGGGACTTCAAAT
CAATATTAGCCATTTCTGAAATTCGTTCTTGTGAATGGacaaataagttt
tttttttgcatgaaaaaaatACTGAAGAGATGGCAAAGTTTGTCAAAACT
CGGAGGAGGCCCAAAATACTTTCCCTTCAGGGTTTCATCTTTTCAAATCA
TATTTTATAGTCATTCATTTTTGAATCATTGAAGGTATATTTTAGTAGTA
AAGGAGTAAAGTTTTTCTGGAACAagtgaaaatcttatttttgtaCTATG
ATTATTTATTCATTAGCCTAGCAAGCTAGatgactaattcagacatagta
gaaataaagcaaaaagtaatgaagggaacaaaatcccgtaacaataactg
tattatcatataacgtcTATACTACTGTGTTACACACATTAACGTAATAt
acattataaacgactccagtctatttATTCATATAACTCATTTGTTCTCG
TTGTTTTTTATAGCTCCGGGTAGAAGGAAACCACCTGACTCTTCCCAGCC
TCCAGCCATAGCTGGAAACAGATCTGGATCCTCTCCTACCAGGAAGAAAG
GTAGGGACCCACAACCAAAGAGGAACTCCATGTCGGAAGATGAAGGGCGT
TCACTTTCTCTGGTGTCCAGTCCACCAGAGAAACCAAAGTCTACTGAGAC
AAACAACAAGAAAATGGTGAGTGTGCTTAAAGGGGGTACAACATAATTCG
TGAAGTGGGTTAATAGCATACCgtcgcgaatctaaaaatagacattgatt
tttaagtttgactgaaattcaatcccatcaccctttgcgtttattacgct
tgcacgcaaattacactcaattacaaagaacaagtaataactttcacgac
ttttgaattaagacgtaaaggattgtgggattgaatttcagtcaaatcag
aGAAGTAATAATCATGACGTTTGCACGACGAAGCGCTATTCGCGGTGACT
TTTTTTGCGCGAATCgagaatttaaaaattttgaagtgaATTTAAGTTCG
CGAATCAGCAGTCTTATTTGTTTCACCTAATTTCTTTTGTTGGCCAAATT
tcggaatttaaatttttcgcgAAGACtaaattttaaggaaaagggccaaa
attggagaaaatgagtaaaattaATCCATGCAAAAGATAACAATGTAATA
GTTTAGGTACAAGCTATATTTCGAAATCCTCTTATGCGCATACCTTTACT
ACACTTTTTCCGATCGGTTTTTAAACATTTCATagtaaaatctttcaaaa
aaaaactcgatagtaaaattgagaatttttgtaCTACACCAAACCACCTG
GGCAcagttttatttgtttattttgttaccATAGCAGCAGCCAATCAAAA
CGCTAGCACCTTCATCCAGTGAGGACGATGCTTGTGAGAACGTTGAAAAT
ACGTCATCAGTTGATTCCATACCGCAACGTCTTCAAATCAATCCAAAATT
AACAAGCTACCTACCCTTCGGTCAAGACCGCACACGTAAGAATCGTTTCA
CTTttctaagaccatgttcgcacgttaCCGTTCtgtttcgctccggtatg
attcCGTTACTGATCGAGTGTCTTCATATATTGGTTTCGTagcgtttcgg
agcaagaaaacggagcagttccgttctgatgaaaaaagtggagcgaaact
gtttcgatctgttttgctttgtaacgtcttcttttttgacttttcgaatt
ttgacgtttacATTTGTTTCGGAATCGTTTTGGAACGGAACGGACCCATA
ACGCTCTGAAAATGGTCTAAGGTTTAAGGCTCTAAGGTTTCTTTTCTACC
ACGAAAACATCCATGAATTTTGATCTAAGAAAGCACAAACAAAACTCAAT
CACATGACAGAACAACTACAATcgagaaaatgttaaaactaTCTATAACA
AAATTCGCACCAAAAAAAAAGTacacaactttgtcgagatattgtgagct
tcaggatttaaattttttgttcattctttttttatcgcatagaagatgct
ctaacttgaattttgagctatcatacattaggtttgaaaaagtaattcga
aaattattttaaaaaaactgactttttttaatgtcgaaNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTCTCTTGgcacttaccttctttacacataaaaataccaaaaaatgc
aactgtgttcatcaaaactcgttacggaatttaagaatatggtaaaacaa
gctattcctaTGTGAAAAAATATCTCCAAGAGAGGTGTGGTGTGCtacgt
gagaaaatttttgaaaaaataaatcaccattcctcaactagttgctcaaa
gaacttgggtctgcattgagtNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNaactttcgaactactttttcaaatttaatgt
ataatagctcaaaattcaagttagagcatcctctatacaataaaaaaaga
atgaacaaaaaatataaatccacaagctcacaatatctcggcaaacctgt
atacttttttttggtgcacccggtacatTCCGTAACTAAAACAGTAGCCA
TTTGATTTGAAGGAAGAGTACTGCTATATCAGTAGGTTCGTCTTGCGATT
CCTGCAttaataacacgcatgcgtaatgtgtcgttcttttaaaccacatg
tagttaattcccgtgataaaaaAAAGACGAATGAATCCGTAGGGGATAGG
GGGatagtcactttcggtcggggttgtggacggtaaaatatgaaatttgt
cgggttctttttattaatttttagtaatgcagggtTTGTTGGATTAGACC
CCCTCTATAATTGATCCGGGGTGGTGGTACCACCCAATTTCTTGTAACCC
TTGGCGGGATTTCTTTGGTCCAAATAATCCACGTACCCTTAGCCTTACTA
ATTTTAAGGATTTCTACAAGCATCATTAtgtaatttctcttttttctagA
CAATGAATTATTAGAGAACAGTAAATGGAAGGCTGTTCAGGATGCATTAC
ATCATCATTCGCCAATTTTTCCTCCAATCAAATTGGTTGAACGACAAGAA
TCGAATTCTGATTGGTCAACTAATTCAAAGGATGATCTTTTGGAGAAAGA
ACGTCAATATAGGATTGCTAGACGCGTTATTGCACAATTTCAAAGTAAGT
TATCTACAATGGTGGTCAGAATATGCTCGGTATTTTAGCGTTTTGCGTTC
AGGCGAGAATTACATTTTCAGAATTTCTACTttatttaatcggatatttt
gATTTGGGAGGAGTATAATGGCTTCTAggctaccttattggtatatattt
tcgcgtgttacaaattttcgcgggtacttaatttcgcgagttttttggtc
aattttcgcgaactttaatactgtttaaatttttcaaaattacaaaatcg
caaaattaaatacacgcgaaaaattctttcttagtattttgttagtattt
ttacatcaaaagcgttgtgtttcaaaaaaaaatcagtctttttcttgctt
tatattcccactttctgaaaatacctagtttagtgaatcgcgaaatttaa
tacacgcgaaaattttccagaagtctgcaaacgcgaaatttaatacacgc
gaaacacgcgaaaatatataccaataattCTCAGCCTAGTCGGACCATTC
ACATGGttatattgtaaaaaattgtttgctgaagggaattaaaaaaatct
agggggggggctgtttttttttaagggGGGCATTCTAACAAGGGATActg
gtaatttttgtttaaggaaggagttttctttaagggcaaaattgcatttt
aaggtGGGACTGGAAAAGTAGGCAGAAACCATGATGCAGAAACCATGATT
CAgaagcttttggatcctcagatcaaGCTCCCAACTCTTAAGTCCCATTT
TAAAAGTCACAGCTAAAGTTAAGGCACCTACAAAATACTTgcgcttttta
gaattttcccTGGAAAATTCCATTTGTTCCAGATATTATGGCGAACACTG
TATTTCTAGCAATAGTCTTGTGATCACATCTTAGAGGGCAGCTTGTTTAC
CCGGCACGCTATACTTGGCATAAGAGACGTTTCGTCACAGAGTAAACAGA
AATCTaacttatattttttgattatttttgccGTTGTTAAAGCGTAATCC
ATTGAGTTTAATTAAAGGTTAAAGGGCAAGAAAAAGCGAGAAACCTTTAA
GATTCTGGATTAGAGTTTACCAGGAAGGGATTACGTCAATGACATGAATT
TGATGTGATTTCtttgtaaattcattaccagtccCTTCAGAGGCCGACCG
CGCAGTTAAGCATTTATAGgtgtatacaccttttcgaccgtagccgccaa
ttgccgtgcgTGCATTTTTTTGTGCGTTTTGCCACCCTAAAACTGTCCCa
gccttttttcgcacctataggcaatagaaaaaagtgtaaaaaaggattgg
atcgagtttagggtggtaaaacggacaaaaaatgccaacgcagcaattgg
cggctacaatgcaatttagaaaatttaaaaatttcatatttctatGGTAT
TtgtttctttgtctttttagATTCTGCAATGCCTTTGGGTGAGAAAGATA
GTGATTTGTCATCTGCTGAGTCTCTTCATTTAGAAGAAATGTTAGAGACA
GAACAAAAACGTCGTATGACTCTCACAAATGAATTGTTAGAACAAACATT
ATCTGAAGGTAAGTCATTTGacatacaacgttgtttcaatgtccTTATAA
CGTCCATAACGCCCATTCTAAGGGTTTATTCGAGTTTAAAAACACCTTCA
AGAATCGTAAACATAGAAAGGGACAGGgtgtcaaaatattttctggaGGA
GCCCACCGCTATGTTTTTCCAAGATCTTTTTGTGTttggaaaaagtaaaa
caaaagttTCCCTTCTGAAACATTAAATCTATTTAAAGATAATCTTAACA
AAAAGGTTTTTCTTAGATATTTCGTCCACTTTTAAAAGACCACTTTGTAC
TTTTTACCAGTACTTTGAGCCCCCCACCCCTTTGATTTTCGCCAAGATTT
TCTAGAGACTTCTGATAATTTATACTGATCGGTAAAACCTGTAAGATATT
TCTTGTTTGAGATGCCTTAGTGTTTCATCAAAGCGAGTTGACGCCGATGA
TGATAACTTTGATTTCCAGGAAGGGATATATCTAACGAAGCTGTGAACAG
AACCCAACACAaggataaatttcaaaatttatccgGTAAGTCcgcagctg
acacacaacgttgttttaacgttcaactaacgttatatggacgttgtgaa
cattagataaatgttgaaacaacgttttgtgctaGCTGGGTCTAagttat
ttaattatttttccaCTCTGCTCTTTCAATAGTTAAAAAGAAACGGCGTG
GTTCCATCAAGGAGAAACTAAAAAACATTTCCCCATTCAAAAGAGACAAG
AATAAAGATAAAGACAAAATAGCTGCAGCCAGCTCATCGACAGAATCCAA
ATGGTCCCTAAATAGAAGGTaatgtattttgaaaaattcctgtaatattt
ttagtcatagatacagttgactctctatATTTCGATatcttaaagaaaga
aaatcgaataagagaatGATTCAAATTATGGAAGGTATTTCATGTCACTT
TCAAAGACAATTTAGTTCGAATCATCGATGttctaattcatgatatgcac
cattgcaatgtcttccacggacccagcagctgattggttgaaagtgacgt
attggctgattttacgtcacttgcaaccaatcagctgttggtcccgtgat
gtaatgtcagaagacattgcaatggtgcatatcatgaattagagAAAGTT
GACTATACTTTGAAATGTCCCTGTTAAATTTTTTACTAGGACATCAATAT
TATAATTATTCTTGAcattaaatttcgcaaaattgatgaaaactattttt
aaagATCATAAACTTTGGCGGGTTgccttgttaaaattttccaagaCATC
AACTTTCGCGATAAACAGGCTAAAAATCGTGGTTAtcgtgaaagtttctg
ttcATGAGAGTTTTTACGCCTAAAGTTAACTCTTGATCATCCAATAAGTT
CGAGCAAAGAACTTTGTTCAAAGTTTTATTTAGTTggggttttttttcgt
cggggaaaaatttcgtcacctagaggtattttcgtcactttcccccgact
tttttttccccgataaggtatagatatgtttgaaaaaaaaatcggaTGTG
TGTTTTTAAATACCCAAAACTTTGAATAAGAATTGGGGAGATTAAATAAA
CATGGAAAATGATTGAACCTGTGATTAAACTTCCAGTTTTGTCTATAACA
GTGCCCTAGCAattgttattttgcaaaatgcaaagtttttcttttttaaa
taataatagatttttatgttgttttttctcgaaagcattttgttttgagt
gcattttcaagcaatctagagctcaaattttcaacccccccccctcgcgg
tgtcactccTACGGCACTGCTATAAGGTACATATTTCTAAATCTGGCATC
TTTAAATGATTTGATAACCTTGACCGTAAAATATGACGAGAGTATGAAgg
ttttaagggctctggacatttgaagataaaaccttatgttttcgctgctt
tgacatgtttaagaacaaactgcttttgaaaaaataaatttaattaatta
catcatgagtaattgaggaataagtgtggcatggaccttaataaaacgtc
ataacgacgctattcatatacttttcacaaaaaaagcctaatctccttgg
ggaaatcattttattgtttcaaaccttttttaagttaatgacaataattt
ctttgtttagatattttcggaaaaattttctatttggcttCATCCCAAGT
AATAGTtgttttcgtatggaaatttagtggagaaaattgccaaaaatgag
gttttttggagattttaaaggaaagatacttccataaaaatttccgaaat
tgtatttttagatactaaatagatacatcacctgaaccaaaaaaaattcc
aaaatgtttgatttttaccgagattagggctttgaaaggtgaaatactct
tcttcgaaaaactcttcgttttcttcttcatttaattttttcatttcaat
ttttgatttttgaattctaaaaaggtaggtttaacaggacatttaaaaaa
agttatacattaatctttttaaaattcagaaattgccattttagttggtg
taaaatcgaaaaaatgtcCAGAGCCCAAAGGCAAAAGTTTATCTAGTTTT
TAGTATCTTAGCAGACAGATGCACGGCTAGTCTTTAGCTTAGCACCTTAG
ACTAATCCCAAGTACTTttataattcttttaaaaaaggcgCTGGAAATCT
CCAACCAAAGAAACATCGCCGAAAGTCGAAAAAGAAACGTCCAAAAGTag
taaaaagagtaaaaaaactaaattcgGTAAAAAGCAGAAACAGCCCACTA
ATGAAGAGCCGTTAGACCCTCGTATGATTGGTATACCAGTCTACACCCCT
AAGTCANAAGAGCCGTTAGACCCTCGTATGATTGGTATACCAGTCTACAC
GCCTAAGTCTCATGTGAGTTTCGATAAATTAGAAGAGAATTATAATTCAA
AGAAGAGAGCGTCCGAGAGTGATTCTATTGGAAATGGAGAACAAAGCTCA
ggtaattttaaactttttttgataatCTAATATCCAGTTGGATTACTTTA
ATTCTACTTTCTGCTAAATGATCCCTGTTCGATTTACaggaaaattgaaa
tcaaatttttttgttaaactTTAAAAGTTGATAGGGCAAACACTTTGATT
GAGTGCAAATAAGGAATTTTTCGAGATATTTTATCTAAAAGTTATTACAA
AAGGCAAACCATTATCCATCGAATATCGGGTCTAGTAGTAATATACTTTC
AATTCTAAACGATTTTTAATGTGAATACgatctttataaaaatattttat
taaattttcttaacatcttTTTTTCTAGGTTCAAATTACCGTGATCCGCC
CGCCACACCCGCCATTGACAGAATATCAGAGGAAGAAAGCTGTGAGCCTG
CTGCCCCTGCTCCAAAGAGAAATCTGAAGAAAGAAATCTCTGACGCCCTA
ACGCCCAcaaaaaaatcgggaaaaaaatcaccgaaatttaaaaaaggaaa
gaagGGCGCTGTTGAAGAACCACCGGAGCTGCCGCCCTCTAGAAATTCTA
ATGTCAATGCCGCCCCAGGACCACCCCTTCCACCTAGAGGCTCTCAacca
taaaataatttttttactcccatttttgtaaatactttttaaataaattt
tcaaacagaGAAATACAAATCATTTATACAAAGATCTATATCTCCTCTCA
GCTTGTGTAAATGATGGTGGTTTTTCtgtctgaaaatttattttgagtaa
ctttttttaaattctttataACTTATTAAATTATATGAAATATATTTCTT
cga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043941XLOC_043941Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070617-exon-scaffold_57-1491911889:123409..123699TCONS_00070617-exon-scaffold_57-1491911889:123409..123699Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1510915933:123409..123699TCONS_00070617-exon-scaffold_57-1510915933:123409..123699Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1575043694:123409..123699TCONS_00070617-exon-scaffold_57-1575043694:123409..123699Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1491911889:124122..124239TCONS_00070617-exon-scaffold_57-1491911889:124122..124239Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1510915933:124122..124239TCONS_00070617-exon-scaffold_57-1510915933:124122..124239Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1575043694:124122..124239TCONS_00070617-exon-scaffold_57-1575043694:124122..124239Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1491911889:125364..125641TCONS_00070617-exon-scaffold_57-1491911889:125364..125641Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1510915933:125364..125641TCONS_00070617-exon-scaffold_57-1510915933:125364..125641Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1575043694:125364..125641TCONS_00070617-exon-scaffold_57-1575043694:125364..125641Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1491911889:126282..126480TCONS_00070617-exon-scaffold_57-1491911889:126282..126480Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1510915933:126282..126480TCONS_00070617-exon-scaffold_57-1510915933:126282..126480Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1575043694:126282..126480TCONS_00070617-exon-scaffold_57-1575043694:126282..126480Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1491911889:127479..127999TCONS_00070617-exon-scaffold_57-1491911889:127479..127999Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1510915933:127479..127999TCONS_00070617-exon-scaffold_57-1510915933:127479..127999Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1575043694:127479..127999TCONS_00070617-exon-scaffold_57-1575043694:127479..127999Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1491911889:128759..128977TCONS_00070617-exon-scaffold_57-1491911889:128759..128977Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1510915933:128759..128977TCONS_00070617-exon-scaffold_57-1510915933:128759..128977Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1575043694:128759..128977TCONS_00070617-exon-scaffold_57-1575043694:128759..128977Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1491911889:129822..130024TCONS_00070617-exon-scaffold_57-1491911889:129822..130024Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1510915933:129822..130024TCONS_00070617-exon-scaffold_57-1510915933:129822..130024Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1575043694:129822..130024TCONS_00070617-exon-scaffold_57-1575043694:129822..130024Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1491911889:130693..130843TCONS_00070617-exon-scaffold_57-1491911889:130693..130843Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1510915933:130693..130843TCONS_00070617-exon-scaffold_57-1510915933:130693..130843Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1575043694:130693..130843TCONS_00070617-exon-scaffold_57-1575043694:130693..130843Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1491911889:132608..132802TCONS_00070617-exon-scaffold_57-1491911889:132608..132802Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1510915933:132608..132802TCONS_00070617-exon-scaffold_57-1510915933:132608..132802Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1575043694:132608..132802TCONS_00070617-exon-scaffold_57-1575043694:132608..132802Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1491911889:134229..134366TCONS_00070617-exon-scaffold_57-1491911889:134229..134366Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1510915933:134229..134366TCONS_00070617-exon-scaffold_57-1510915933:134229..134366Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1575043694:134229..134366TCONS_00070617-exon-scaffold_57-1575043694:134229..134366Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1491911889:135041..135176TCONS_00070617-exon-scaffold_57-1491911889:135041..135176Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1510915933:135041..135176TCONS_00070617-exon-scaffold_57-1510915933:135041..135176Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1575043694:135041..135176TCONS_00070617-exon-scaffold_57-1575043694:135041..135176Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1491911889:137046..137359TCONS_00070617-exon-scaffold_57-1491911889:137046..137359Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1510915933:137046..137359TCONS_00070617-exon-scaffold_57-1510915933:137046..137359Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1575043694:137046..137359TCONS_00070617-exon-scaffold_57-1575043694:137046..137359Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1491911889:137687..138161TCONS_00070617-exon-scaffold_57-1491911889:137687..138161Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1510915933:137687..138161TCONS_00070617-exon-scaffold_57-1510915933:137687..138161Clytia hemisphaericaexon
TCONS_00070617-exon-scaffold_57-1575043694:137687..138161TCONS_00070617-exon-scaffold_57-1575043694:137687..138161Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:123409..138161 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.0888594	0.528584	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070617 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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