TCONS_00070616 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070616
Unique NameTCONS_00070616
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3235

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070616 ID=TCONS_00070616|Name=TCONS_00070616|organism=Clytia hemisphaerica|type=transcript|length=3235bp
CGAAGAAAGTTACAAATGGTAGGAAGtttgaacagaaaaaaaaaatcaaa
aaaaaaacacaaaaagagGCCGCACTGCTACATCAACACGATGATTACAT
AAGCAAACAGATTTTTGACAAACCTTCGTATTTTTTTTTACcggattttt
ctttttggtttccAAAAAGATGTAGCTGATTTTATATAAGcatgaaactt
ttttttcgtgCTCTTTTGTTCCTGAGCTTGATCACAATACTTCAATGCAG
GGATGGAGGATACCCGTATAATGCGTATGACGAATATCTAGaactcGCAA
CTACGTCCAAGCCTGAGTCGTCGGGAATGGCGAAAAGAATTTTGATTCCC
GTGCAGATTATTCTGGTGGGGGCAATTGCTTCATTCGTTCTTTATCGGAA
ATGTCGGTAtCCAGACCTTGGTTTATTTGAGTTTAACAAAAAGCCGCTGG
AAGGCTTCACGAATGCTCGCGATGATACCAAAAAGCCGTATGTAGAGCTC
TCAGAAACGATGAGCTCCCCATCTATGACGTTGACATGCCCTCAAGTCAA
AGATCAAATTTGGACGAAAGAGGCCGAGAGGCATTTCTTACCGCCGACTC
GTGAGGATTTTTATGAATCGCCGCAGGATGATGAATATTTAGAACCCGTC
GTGGACAACGTGGAATCGCACGAGTATGTCTCCATAGAAATGGATGATCC
TTTTATACAACAGCGGAATAATAAAGATATTCCGGATGTAGAGAATCTAC
GGATAGACCCGGTTAAGCGGTACGTCGAGCCATATGAAGAAGATAGGCGA
CAAACCAATGGTTATTCACCTGGTTACGATTGTTACTATGACAACGTTGA
TCATATTTTGAGTAACCATGAACAAATGAACAACAGACAGGCGGTGGTGG
AGGAGGAAGGAGACTACACAAACCTAACGAACAATAATACTTATAACGAC
GATGACGCATACGAAACACTTGATTCTGTGCGCTCTGTCCGATCAATTGA
AGCTGCTCGATCAATTGAAGCTGTCCAATCAGAAAACATCTACGAAGAAA
TCAACCCAGGGTTGCCAAATACTGAACCTGACCCTACGTTACCTTTCCCG
CTCTTTTTTGCGCTCGCCGCTTACCGATTCAAAAACGCGGCACTGCGTAC
AAAAGAAGAGTTGGAGCAACGAATGTTCGGTACCGTAAAAACATCTCAAG
ATGAAGCCGAAGACGATAATGCTTATACTAATATCAATCCATTGCCAGAT
GTCGCGAAAATCAAAGCCAAATATCGTAGTAACGAACCCGGTAGTCGGGT
GCCTGTCCCTGCGATTAATAAGAATCGAGGAAATAGTAATGTCTTTGATG
CTTATAGTAATGTTATCGATTCATTAACAGCTAAAGCTGAAAAGCTCTCT
AATCAAGGTAGTAATCAAGTATCATCTCGTACAAGgagtaaaacaaagaa
aatgaaaagtgtagATGGCTCCTTCGACCAAACAATACCAAAAGAAAACT
CACGATCTAGGAAGAAAACAAATCCGTCTTCCAACCCACAAGATAATCCG
GAAACCCGATCTTCTCCTAGTTCCGGTAAACGGAAACCGCCCCAAGGACA
AGATTCCGTTCTAGAAAATAAATCAGCTCCGGGTAGAAGGAAACCACCTG
ACTCTTCCCAGCCTCCAGCCATAGCTGGAAACAGATCTGGATCCTCTCCT
ACCAGGAAGAAAGGTAGGGACCCACAACCAAAGAGGAACTCCATGTCGGA
AGATGAAGGGCGTTCACTTTCTCTGGTGTCCAGTCCACCAGAGAAACCAA
AGTCTACTGAGACAAACAACAAGAAAATGCAGCCAATCAAAACGCTAGCA
CCTTCATCCAGTGAGGACGATGCTTGTGAGAACGTTGAAAATACGTCATC
AGTTGATTCCATACCGCAACGTCTTCAAATCAATCCAAAATTAACAAGCT
ACCTACCCTTCGGTCAAGACCGCACACACAATGAATTATTAGAGAACAGT
AAATGGAAGGCTGTTCAGGATGCATTACATCATCATTCGCCAATTTTTCC
TCCAATCAAATTGGTTGAACGACAAGAATCGAATTCTGATTGGTCAACTA
ATTCAAAGGATGATCTTTTGGAGAAAGAACGTCAATATAGGATTGCTAGA
CGCGTTATTGCACAATTTCAAAATTCTGCAATGCCTTTGGGTGAGAAAGA
TAGTGATTTGTCATCTGCTGAGTCTCTTCATTTAGAAGAAATGTTAGAGA
CAGAACAAAAACGTCGTATGACTCTCACAAATGAATTGTTAGAACAAACA
TTATCTGAAGTTAAAAAGAAACGGCGTGGTTCCATCAAGGAGAAACTAAA
AAACATTTCCCCATTCAAAAGAGACAAGAATAAAGATAAAGACAAAATAG
CTGCAGCCAGCTCATCGACAGAATCCAAATGGTCCCTAAATAGAAGgcgC
TGGAAATCTCCAACCAAAGAAACATCGCCGAAAGTCGAAAAAGAAACGTC
CAAAAGTagtaaaaagagtaaaaaaactaaattcgGTAAAAAGCAGAAAC
AGCCCACTAATGAAGAGCCGTTAGACCCTCGTATGATTGGTATACCAGTC
TACACCCCTAAGTCANAAGAGCCGTTAGACCCTCGTATGATTGGTATACC
AGTCTACACGCCTAAGTCTCATGTGAGTTTCGATAAATTAGAAGAGAATT
ATAATTCAAAGAAGAGAGCGTCCGAGAGTGATTCTATTGGAAATGGAGAA
CAAAGCTCAgGTTCAAATTACCGTGATCCGCCCGCCACACCCGCCATTGA
CAGAATATCAGAGGAAGAAAGCTGTGAGCCTGCTGCCCCTGCTCCAAAGA
GAAATCTGAAGAAAGAAATCTCTGACGCCCTAACGCCCAcaaaaaaatcg
ggaaaaaaatcaccgaaatttaaaaaaggaaagaagGGCGCTGTTGAAGA
ACCACCGGAGCTGCCGCCCTCTAGAAATTCTAATGTCAATGCCGCCCCAG
GACCACCCCTTCCACCTAGAGGCTCTCAaccataaaataatttttttact
cccatttttgtaaatactttttaaataaattttcaaacagaGAAATACAA
ATCATTTATACAAAGATCTATATCTCCTCTCAGCTTGTGTAAATGATGGT
GGTTTTTCtgtctgaaaatttattttgagtaactttttttaaattcttta
taACTTATTAAATTATATGAAATATATTTCTTcga
Run BLAST on NCBI

transcript from alignment at scaffold_57:123409..138161+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070616 ID=TCONS_00070616|Name=TCONS_00070616|organism=Clytia hemisphaerica|type=transcript|length=14753bp|location=Sequence derived from alignment at scaffold_57:123409..138161+ (Clytia hemisphaerica)
CGAAGAAAGTTACAAATGGTAGGAAGtttgaacagaaaaaaaaaatcaaa aaaaaaacacaaaaagagGCCGCACTGCTACATCAACACGATGATTACAT AAGCAAACAGATTTTTGACAAACCTTCGTATTTTTTTTTACcggattttt ctttttggtttccAAAAAGATGTAGCTGATTTTATATAAGcatgaaactt ttttttcgtgCTCTTTTGTTCCTGAGCTTGATCACAATACTTCAATGCAG GGATGGAGGATACCCGTATAATGCGTATGACGAATATCTAGGTATGTATG TTTTTGTTGTAAGTAACTAAGAAGGTAATTCTTGTAGAATTTATGCAAAT GAatatatagaaatagaaatagttgAAAACATATATCCTCTCGTTTGATA TTCTTTTAATTAGACTAGATTCACGGTTGAAAAAATTCGGTCGTATAAAT TCATTTCACAGGaacttaaaataaaactttttctttcacttCCCTATGGT TTAtgaaatcgtcgtttttgcgAGCTATGCAAAGTGTCGAAATTTATAAC TCTGCTAAAATGTGATTCCCTTCATTATTTCAGGTTGACTctatattaaa atatttttctttaggATTTGCGTTTTTTCTCGGAGTATGGATCCAGGCTT AAGCGATGACTTAATGTGTCCCGAGAGTGCACTAATTtctctaaattttt ttttttttttcagaactcGCAACTACGTCCAAGCCTGAGTCGTCGGGAAT GGCGAAAAGAATTTTGATTCCCGTGCAGATTATTCTGGTGGGGGCAATTG CTTCATTCGTTCTTTATCGGAAATGTCGGTAGTAAGTgtggttttttttt atttctatttggttgagttgcaggaggctttagaggcctattctcgtaac tatagacgcttactaatgagcgtcccgtcagcaccttgaactgactaccc aattccccacacatggcatgggttgacctgagcgaaggaacgttcacttg ccaagtgaactgccgtgagtgggaatcgaaccctggcctcctgcacagaa gccaaggtcgactaccactataccatGGCACATTTATTTTACAGTTGAGc ttcgctaattcgaacttgaaCGAGGAATCTAATTTGTTGGAACCACAGAA AGATTCCAATACTAGAAAGCATTTTACGAAGGCTTCTTCTCGACGGGGAC TGAAAATTAGTTCaatttatagaaagatttgaatgatagaatttcgaatt agagagagtgcaCTGTATATATTAAAACCTTCACAGCTTTTGCCGTGCCA GATTTCCTTCGAAATACGGAATTCGCTAAAATGGTCTCCAAAACTCATGT TAAAAACATGAATGAAACTCCTGGCACTGTTcatccattaaaaaaaatac atttataGTCTATATATTTTCTCAAACTTTGCTAAGACCAGAACTCTTCG GCAATATTGACAAACAAACTGACATTCGACCGCATCTATCTTtatgtcaa atattttttaagaataatttttagatttcattCGCTTTAAATCATAAATA TTCCGTGCTACCATGTAGGAACCATGTCATCGTAATTCATTGCCCCCGTC AACGgggggggccaggggggccatggcccccccaatattttgcaaagtat tttttttttagtttgaaaaatcttatatataccgtttagaggggtgaaat aagggcaaaaagtcgaaaattttcttcgtcgcccaaccatggtgggcgac atatttttttggccccctcaattcgatgcgcacgccgggggccatNGATT TCATTCGCTTTAAATCGTCAATATTCCGTGCTACCATGTAGGAACCATGT CATCGTAATTTAGCCTAATTCCATTGAAAGTGATTCCATATggtagaaaa aaagttaaaaaagagaGCAAATTTAAACCGAATGGactttgtttgtaatt tttagtCCAGACCTTGGTTTATTTGAGTTTAACAAAAAGCCGCTGGAAGG CTTCACGAATGCTCGCGATGATACCAAAAAGCCGTATGTAGAGCTCTCAG AAACGATGAGCTCCCCATCTATGACGTTGACATGCCCTCAAGTCAAAGAT CAAATTTGGACGAAAGAGGCCGAGAGGCATTTCTTACCGCCGACTCGTGA GGATTTTTATGAATCGCCGCAGGATGATGAATATTTAGAACCCGTCGTGG ACAACGTGGAATCGCACGAGTATGTCTCCATAGGTGAGTAAAACACACAT TTTcttatatacacgtttttttataagaacaaactatataagaacatatg acttcaatggccaaaatattaagaacaagttaagaacatctaaaggcttT CAGGACTCTAAagcacccgatttcttaagaaaacggacaaaaaaacggtc aaaaaattttagttgttcttataaaaaaacgtgtaccattTTGACAGACT CGTGTCTTTCTCGACATATCCTCTTTAAGCGAGGTTATATTTATGCGCTC TCATCCCCCCTTACAACATCGGCacttacactcttttttataagaaccag tggAGAGtaggttgttcttatttttatggCAATCCCAACTTCAGTTCTTA TCCTGTTATAATTTTAGTGCTAAACTGAGGTTTTTAAAGCTTTATACTAT GTGATCCTTTGATTGCTTGAAACTCAGCGATTCCAGTCtcgacatttttt ttaaattgtcctCATCTTTTGACGGTTTTTGAGCCTCTCcttgttcttat gaaaatactcttttttttttaagagtgtATTGGTACAGATAAATATATTA ATATTGATAAAGTATCAATGACACAAAGGATACAAATTGACTCCAATCAT TGTTTTCACTTTGCTTTTTTTAGAAATGGATGATCCTTTTATACAACAGC GGAATAATAAAGATATTCCGGATGTAGAGAATCTACGGATAGACCCGGTT AAGCGGTACGTCGAGCCATATGAAGAAGATAGGCGACAAACCAATGGTTA TTCACCTGGTTACGATTGTTACTATGACAACGTTGATCATATTTTGAGTA ACCATGAACAAATGAACAACAGGTAATTAAAACAACTTTTCCGGGCGAAT ATTGTTATTTACGATAGTCGAACTAGTTATCATAGTTGAACATATTTTGA TTTGGGAGGTAGGATTTTCACACCCATATCCGCCTTGGATTTTTTCTATG ACACTGTTGATCATGTTTCAATAATGAAAAAAACTAAGGTGCGGAACTTC TTTGTCTGGACGATCGagcatcaaatttttcagggtGGTTTCCTTAAAGG GGTGCTTTTATTGCGGTGCTCTTAAAAAGTGGTGCCCAAGCAAAGATAAG TTGAGCgagcaaggttgtgggttcaattgAGTTTGCAGCGGGGCTAGAGA TGGAGCAAGGTCATACAAATGATCGGAAAATGCTCTGTTAAATTATCAAC AACTAAAGATAGGTCAACTGTAAAAGTACAAATCAATGGAAATGAGTGGT GCCTTCCCCTACCTAGGCTTGGCTGCCATGTGTCCCTCCAATTTGTTTTG TTAAACGGAAGCAAATAGGCCTAAAAAACGTCCGCTTTTTTGCTGAATAA GTTTTATGAGATGGAACTTGTTGACCTCATTCAAATTTAGAGGAAAAGAA TACTATGATACGGAAGGTGTATTCACATGCAGTAATGTGTGtttgaacag aaaaaaaaaatgacgacttgaaaaatatttcagtctTGGAAATCTGCAAG TCTAAAGCTTTTAATCTggttataagcgttatgctcaAATCAGCCCTCTA ACTACTTGATTGAATCCGGCTACCAGTATATAGGAAGCTTGCCTAGGTTT AGAGTTGACTAGTCCgtcatcttgttttcaattctggtcgCTAACAGCGT GATTCGAATACAATGTAAATTAGAAAACAACATAACAGACTAGTCGATTT TCACGGAAAATCTGCTAGAAATTAGCCTATATCTAttgtgtaaaagaata tgatatcTAATATGATATATGTGGTTATGCTTGTAAAACAACATATTGGA TATCAATTTTTATCTTCTAGACAGGCGGTGGTGGAGGAGGAAGGAGACTA CACAAACCTAACGAACAATAATACTTATAACGACGATGACGCATACGAAA CACTTGATTCTGTGCGCTCTGTCCGATCAATTGAAGCTGCTCGATCAATT GAAGCTGTCCAATCAGAAAACATCTACGAAGAAATCAACCCAGGGTTGCC AAATACTGAACCTGACCCTACGTTACCTTTCCCGCTCTTTTTTGCGCTCG CCGCTTACCGATTCAAAAACGCGGCACTGCGTACAAAAGAAGAGTTGGAG CAACGAATGTTCGGTACCGTAAAAACATCTCAAGATGAAGCCGAAGACGA TAATGCTTATACTAATATCAATCCATTGCCAGATGTCGCGAAAATCAAAG CCAAATATCGTAGTAACGAACCCGGTAGTCGGGTGCCTGTCCCTGCGATT AATAAGAATCGAGGAAATAGTAATGTCTTTGATGCTTATAGTAATGTTAT CGATTCATTAACAGCTAAAGCTGAAAAGCTCTCTAATCAAGGTAAGAATT CTTTAAGGAAAGagcttttgaaatttattatACATGGTGCATATTAAATA AACTATGCATCTTTGCATCATCAACTTTCACTAGCTTTGGTATACTacat tttttggcattttgcgCTTCGTAAATAtcccatttctaaattttcccaGC TTCTTTGGTTATTCATGCGTCCGAAGCATAAAAGTAGACATTCAGCTACG GTGCACAAGGTTTTGGGTTCAATCTCagtcgggtcataccaaaggtTTCA AAATAGGACTTGCTGCCGTTGTGCTTAATGCTCACAGCAATTGAAGagaa tagcgagtttatgtatgtgtgtttttcagcgacggagacggtaaggttct aatttgagtagatcctgaccagctgaggacgacggtaaatcagcactttt accgtcctcgattttgcggggcggaattgcgggtttttctaaaccgcttc agtcactctaccgtcctcaaaagtgcaaatacataaactcgctaatgtac ATAGGTGTGTGGATCAGTCCAGTGGGAAGGGTGGAGCTATCGGGTCGCTA TTCCGACTGCAATCGCTCTAATATGGTACAtttgagtctctataactcga acacgcactggaaacacaaatatgttcaagttatggagtaaggtttataa ggcattgcaAAATAAAGGGACCAAAAAACTTGTTCCAGTTACGGAGTcat tcgagtaatagaggttcgagttaaagagactccacttcAATTTTTTATAG GTAGTAATCAAGTATCATCTCGTACAAGgagtaaaacaaagaaaatgaaa agtgtagATGGCTCCTTCGACCAAACAATACCAAAAGAAAACTCACGATC TAGGAAGAAAACAAATCCGTCTTCCAACCCACAAGATAATCCGGAAACCC GATCTTCTCCTAGTTCCGGTAAACGGAAACCGCCCCAAGGACAAGATTCC GTTCTAGAAAATAAATCAGGTTTGTTTATTCAGTGtacaaagttcttccg tctgaagcggatttccgtctcagcgAGGTACAAAAATAGGCTTGTCCGTC TCCgaattcaacaaaattctgcaaaacatGAAGAATCTGGCCAGATTTGT TGTTCAAAATCCAATTTTCCGCCTGAGGAGGTTTTACACAATGTTGAAAA CTTCAAAGGATAAAAACTACTTTGACGGGGATTACATACTTTTGCAGGTA ACAGTCAATGTTGACTGCTatgctcggctgttcttattttcgtgATTTCC GGCTCAAGTGTTAAGATTCGCAAGCGGCTGCCTTCCTGAAGCACATAATC TTAAAATGGTTCATAATTTAGTTTACTTATTGATTAAGGGGACTTCAAAT CAATATTAGCCATTTCTGAAATTCGTTCTTGTGAATGGacaaataagttt tttttttgcatgaaaaaaatACTGAAGAGATGGCAAAGTTTGTCAAAACT CGGAGGAGGCCCAAAATACTTTCCCTTCAGGGTTTCATCTTTTCAAATCA TATTTTATAGTCATTCATTTTTGAATCATTGAAGGTATATTTTAGTAGTA AAGGAGTAAAGTTTTTCTGGAACAagtgaaaatcttatttttgtaCTATG ATTATTTATTCATTAGCCTAGCAAGCTAGatgactaattcagacatagta gaaataaagcaaaaagtaatgaagggaacaaaatcccgtaacaataactg tattatcatataacgtcTATACTACTGTGTTACACACATTAACGTAATAt acattataaacgactccagtctatttATTCATATAACTCATTTGTTCTCG TTGTTTTTTATAGCTCCGGGTAGAAGGAAACCACCTGACTCTTCCCAGCC TCCAGCCATAGCTGGAAACAGATCTGGATCCTCTCCTACCAGGAAGAAAG GTAGGGACCCACAACCAAAGAGGAACTCCATGTCGGAAGATGAAGGGCGT TCACTTTCTCTGGTGTCCAGTCCACCAGAGAAACCAAAGTCTACTGAGAC AAACAACAAGAAAATGGTGAGTGTGCTTAAAGGGGGTACAACATAATTCG TGAAGTGGGTTAATAGCATACCgtcgcgaatctaaaaatagacattgatt tttaagtttgactgaaattcaatcccatcaccctttgcgtttattacgct tgcacgcaaattacactcaattacaaagaacaagtaataactttcacgac ttttgaattaagacgtaaaggattgtgggattgaatttcagtcaaatcag aGAAGTAATAATCATGACGTTTGCACGACGAAGCGCTATTCGCGGTGACT TTTTTTGCGCGAATCgagaatttaaaaattttgaagtgaATTTAAGTTCG CGAATCAGCAGTCTTATTTGTTTCACCTAATTTCTTTTGTTGGCCAAATT tcggaatttaaatttttcgcgAAGACtaaattttaaggaaaagggccaaa attggagaaaatgagtaaaattaATCCATGCAAAAGATAACAATGTAATA GTTTAGGTACAAGCTATATTTCGAAATCCTCTTATGCGCATACCTTTACT ACACTTTTTCCGATCGGTTTTTAAACATTTCATagtaaaatctttcaaaa aaaaactcgatagtaaaattgagaatttttgtaCTACACCAAACCACCTG GGCAcagttttatttgtttattttgttaccATAGCAGCAGCCAATCAAAA CGCTAGCACCTTCATCCAGTGAGGACGATGCTTGTGAGAACGTTGAAAAT ACGTCATCAGTTGATTCCATACCGCAACGTCTTCAAATCAATCCAAAATT AACAAGCTACCTACCCTTCGGTCAAGACCGCACACGTAAGAATCGTTTCA CTTttctaagaccatgttcgcacgttaCCGTTCtgtttcgctccggtatg attcCGTTACTGATCGAGTGTCTTCATATATTGGTTTCGTagcgtttcgg agcaagaaaacggagcagttccgttctgatgaaaaaagtggagcgaaact gtttcgatctgttttgctttgtaacgtcttcttttttgacttttcgaatt ttgacgtttacATTTGTTTCGGAATCGTTTTGGAACGGAACGGACCCATA ACGCTCTGAAAATGGTCTAAGGTTTAAGGCTCTAAGGTTTCTTTTCTACC ACGAAAACATCCATGAATTTTGATCTAAGAAAGCACAAACAAAACTCAAT CACATGACAGAACAACTACAATcgagaaaatgttaaaactaTCTATAACA AAATTCGCACCAAAAAAAAAGTacacaactttgtcgagatattgtgagct tcaggatttaaattttttgttcattctttttttatcgcatagaagatgct ctaacttgaattttgagctatcatacattaggtttgaaaaagtaattcga aaattattttaaaaaaactgactttttttaatgtcgaaNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNTTCTCTTGgcacttaccttctttacacataaaaataccaaaaaatgc aactgtgttcatcaaaactcgttacggaatttaagaatatggtaaaacaa gctattcctaTGTGAAAAAATATCTCCAAGAGAGGTGTGGTGTGCtacgt gagaaaatttttgaaaaaataaatcaccattcctcaactagttgctcaaa gaacttgggtctgcattgagtNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNaactttcgaactactttttcaaatttaatgt ataatagctcaaaattcaagttagagcatcctctatacaataaaaaaaga atgaacaaaaaatataaatccacaagctcacaatatctcggcaaacctgt atacttttttttggtgcacccggtacatTCCGTAACTAAAACAGTAGCCA TTTGATTTGAAGGAAGAGTACTGCTATATCAGTAGGTTCGTCTTGCGATT CCTGCAttaataacacgcatgcgtaatgtgtcgttcttttaaaccacatg tagttaattcccgtgataaaaaAAAGACGAATGAATCCGTAGGGGATAGG GGGatagtcactttcggtcggggttgtggacggtaaaatatgaaatttgt cgggttctttttattaatttttagtaatgcagggtTTGTTGGATTAGACC CCCTCTATAATTGATCCGGGGTGGTGGTACCACCCAATTTCTTGTAACCC TTGGCGGGATTTCTTTGGTCCAAATAATCCACGTACCCTTAGCCTTACTA ATTTTAAGGATTTCTACAAGCATCATTAtgtaatttctcttttttctagA CAATGAATTATTAGAGAACAGTAAATGGAAGGCTGTTCAGGATGCATTAC ATCATCATTCGCCAATTTTTCCTCCAATCAAATTGGTTGAACGACAAGAA TCGAATTCTGATTGGTCAACTAATTCAAAGGATGATCTTTTGGAGAAAGA ACGTCAATATAGGATTGCTAGACGCGTTATTGCACAATTTCAAAGTAAGT TATCTACAATGGTGGTCAGAATATGCTCGGTATTTTAGCGTTTTGCGTTC AGGCGAGAATTACATTTTCAGAATTTCTACTttatttaatcggatatttt gATTTGGGAGGAGTATAATGGCTTCTAggctaccttattggtatatattt tcgcgtgttacaaattttcgcgggtacttaatttcgcgagttttttggtc aattttcgcgaactttaatactgtttaaatttttcaaaattacaaaatcg caaaattaaatacacgcgaaaaattctttcttagtattttgttagtattt ttacatcaaaagcgttgtgtttcaaaaaaaaatcagtctttttcttgctt tatattcccactttctgaaaatacctagtttagtgaatcgcgaaatttaa tacacgcgaaaattttccagaagtctgcaaacgcgaaatttaatacacgc gaaacacgcgaaaatatataccaataattCTCAGCCTAGTCGGACCATTC ACATGGttatattgtaaaaaattgtttgctgaagggaattaaaaaaatct agggggggggctgtttttttttaagggGGGCATTCTAACAAGGGATActg gtaatttttgtttaaggaaggagttttctttaagggcaaaattgcatttt aaggtGGGACTGGAAAAGTAGGCAGAAACCATGATGCAGAAACCATGATT CAgaagcttttggatcctcagatcaaGCTCCCAACTCTTAAGTCCCATTT TAAAAGTCACAGCTAAAGTTAAGGCACCTACAAAATACTTgcgcttttta gaattttcccTGGAAAATTCCATTTGTTCCAGATATTATGGCGAACACTG TATTTCTAGCAATAGTCTTGTGATCACATCTTAGAGGGCAGCTTGTTTAC CCGGCACGCTATACTTGGCATAAGAGACGTTTCGTCACAGAGTAAACAGA AATCTaacttatattttttgattatttttgccGTTGTTAAAGCGTAATCC ATTGAGTTTAATTAAAGGTTAAAGGGCAAGAAAAAGCGAGAAACCTTTAA GATTCTGGATTAGAGTTTACCAGGAAGGGATTACGTCAATGACATGAATT TGATGTGATTTCtttgtaaattcattaccagtccCTTCAGAGGCCGACCG CGCAGTTAAGCATTTATAGgtgtatacaccttttcgaccgtagccgccaa ttgccgtgcgTGCATTTTTTTGTGCGTTTTGCCACCCTAAAACTGTCCCa gccttttttcgcacctataggcaatagaaaaaagtgtaaaaaaggattgg atcgagtttagggtggtaaaacggacaaaaaatgccaacgcagcaattgg cggctacaatgcaatttagaaaatttaaaaatttcatatttctatGGTAT TtgtttctttgtctttttagATTCTGCAATGCCTTTGGGTGAGAAAGATA GTGATTTGTCATCTGCTGAGTCTCTTCATTTAGAAGAAATGTTAGAGACA GAACAAAAACGTCGTATGACTCTCACAAATGAATTGTTAGAACAAACATT ATCTGAAGGTAAGTCATTTGacatacaacgttgtttcaatgtccTTATAA CGTCCATAACGCCCATTCTAAGGGTTTATTCGAGTTTAAAAACACCTTCA AGAATCGTAAACATAGAAAGGGACAGGgtgtcaaaatattttctggaGGA GCCCACCGCTATGTTTTTCCAAGATCTTTTTGTGTttggaaaaagtaaaa caaaagttTCCCTTCTGAAACATTAAATCTATTTAAAGATAATCTTAACA AAAAGGTTTTTCTTAGATATTTCGTCCACTTTTAAAAGACCACTTTGTAC TTTTTACCAGTACTTTGAGCCCCCCACCCCTTTGATTTTCGCCAAGATTT TCTAGAGACTTCTGATAATTTATACTGATCGGTAAAACCTGTAAGATATT TCTTGTTTGAGATGCCTTAGTGTTTCATCAAAGCGAGTTGACGCCGATGA TGATAACTTTGATTTCCAGGAAGGGATATATCTAACGAAGCTGTGAACAG AACCCAACACAaggataaatttcaaaatttatccgGTAAGTCcgcagctg acacacaacgttgttttaacgttcaactaacgttatatggacgttgtgaa cattagataaatgttgaaacaacgttttgtgctaGCTGGGTCTAagttat ttaattatttttccaCTCTGCTCTTTCAATAGTTAAAAAGAAACGGCGTG GTTCCATCAAGGAGAAACTAAAAAACATTTCCCCATTCAAAAGAGACAAG AATAAAGATAAAGACAAAATAGCTGCAGCCAGCTCATCGACAGAATCCAA ATGGTCCCTAAATAGAAGGTaatgtattttgaaaaattcctgtaatattt ttagtcatagatacagttgactctctatATTTCGATatcttaaagaaaga aaatcgaataagagaatGATTCAAATTATGGAAGGTATTTCATGTCACTT TCAAAGACAATTTAGTTCGAATCATCGATGttctaattcatgatatgcac cattgcaatgtcttccacggacccagcagctgattggttgaaagtgacgt attggctgattttacgtcacttgcaaccaatcagctgttggtcccgtgat gtaatgtcagaagacattgcaatggtgcatatcatgaattagagAAAGTT GACTATACTTTGAAATGTCCCTGTTAAATTTTTTACTAGGACATCAATAT TATAATTATTCTTGAcattaaatttcgcaaaattgatgaaaactattttt aaagATCATAAACTTTGGCGGGTTgccttgttaaaattttccaagaCATC AACTTTCGCGATAAACAGGCTAAAAATCGTGGTTAtcgtgaaagtttctg ttcATGAGAGTTTTTACGCCTAAAGTTAACTCTTGATCATCCAATAAGTT CGAGCAAAGAACTTTGTTCAAAGTTTTATTTAGTTggggttttttttcgt cggggaaaaatttcgtcacctagaggtattttcgtcactttcccccgact tttttttccccgataaggtatagatatgtttgaaaaaaaaatcggaTGTG TGTTTTTAAATACCCAAAACTTTGAATAAGAATTGGGGAGATTAAATAAA CATGGAAAATGATTGAACCTGTGATTAAACTTCCAGTTTTGTCTATAACA GTGCCCTAGCAattgttattttgcaaaatgcaaagtttttcttttttaaa taataatagatttttatgttgttttttctcgaaagcattttgttttgagt gcattttcaagcaatctagagctcaaattttcaacccccccccctcgcgg tgtcactccTACGGCACTGCTATAAGGTACATATTTCTAAATCTGGCATC TTTAAATGATTTGATAACCTTGACCGTAAAATATGACGAGAGTATGAAgg ttttaagggctctggacatttgaagataaaaccttatgttttcgctgctt tgacatgtttaagaacaaactgcttttgaaaaaataaatttaattaatta catcatgagtaattgaggaataagtgtggcatggaccttaataaaacgtc ataacgacgctattcatatacttttcacaaaaaaagcctaatctccttgg ggaaatcattttattgtttcaaaccttttttaagttaatgacaataattt ctttgtttagatattttcggaaaaattttctatttggcttCATCCCAAGT AATAGTtgttttcgtatggaaatttagtggagaaaattgccaaaaatgag gttttttggagattttaaaggaaagatacttccataaaaatttccgaaat tgtatttttagatactaaatagatacatcacctgaaccaaaaaaaattcc aaaatgtttgatttttaccgagattagggctttgaaaggtgaaatactct tcttcgaaaaactcttcgttttcttcttcatttaattttttcatttcaat ttttgatttttgaattctaaaaaggtaggtttaacaggacatttaaaaaa agttatacattaatctttttaaaattcagaaattgccattttagttggtg taaaatcgaaaaaatgtcCAGAGCCCAAAGGCAAAAGTTTATCTAGTTTT TAGTATCTTAGCAGACAGATGCACGGCTAGTCTTTAGCTTAGCACCTTAG ACTAATCCCAAGTACTTttataattcttttaaaaaaggcgCTGGAAATCT CCAACCAAAGAAACATCGCCGAAAGTCGAAAAAGAAACGTCCAAAAGTag taaaaagagtaaaaaaactaaattcgGTAAAAAGCAGAAACAGCCCACTA ATGAAGAGCCGTTAGACCCTCGTATGATTGGTATACCAGTCTACACCCCT AAGTCANAAGAGCCGTTAGACCCTCGTATGATTGGTATACCAGTCTACAC GCCTAAGTCTCATGTGAGTTTCGATAAATTAGAAGAGAATTATAATTCAA AGAAGAGAGCGTCCGAGAGTGATTCTATTGGAAATGGAGAACAAAGCTCA ggtaattttaaactttttttgataatCTAATATCCAGTTGGATTACTTTA ATTCTACTTTCTGCTAAATGATCCCTGTTCGATTTACaggaaaattgaaa tcaaatttttttgttaaactTTAAAAGTTGATAGGGCAAACACTTTGATT GAGTGCAAATAAGGAATTTTTCGAGATATTTTATCTAAAAGTTATTACAA AAGGCAAACCATTATCCATCGAATATCGGGTCTAGTAGTAATATACTTTC AATTCTAAACGATTTTTAATGTGAATACgatctttataaaaatattttat taaattttcttaacatcttTTTTTCTAGGTTCAAATTACCGTGATCCGCC CGCCACACCCGCCATTGACAGAATATCAGAGGAAGAAAGCTGTGAGCCTG CTGCCCCTGCTCCAAAGAGAAATCTGAAGAAAGAAATCTCTGACGCCCTA ACGCCCAcaaaaaaatcgggaaaaaaatcaccgaaatttaaaaaaggaaa gaagGGCGCTGTTGAAGAACCACCGGAGCTGCCGCCCTCTAGAAATTCTA ATGTCAATGCCGCCCCAGGACCACCCCTTCCACCTAGAGGCTCTCAacca taaaataatttttttactcccatttttgtaaatactttttaaataaattt tcaaacagaGAAATACAAATCATTTATACAAAGATCTATATCTCCTCTCA GCTTGTGTAAATGATGGTGGTTTTTCtgtctgaaaatttattttgagtaa ctttttttaaattctttataACTTATTAAATTATATGAAATATATTTCTT cga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043941XLOC_043941Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070616-exon-scaffold_57-1491911889:123409..123699TCONS_00070616-exon-scaffold_57-1491911889:123409..123699Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1510915933:123409..123699TCONS_00070616-exon-scaffold_57-1510915933:123409..123699Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1575043694:123409..123699TCONS_00070616-exon-scaffold_57-1575043694:123409..123699Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1491911889:124122..124239TCONS_00070616-exon-scaffold_57-1491911889:124122..124239Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1510915933:124122..124239TCONS_00070616-exon-scaffold_57-1510915933:124122..124239Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1575043694:124122..124239TCONS_00070616-exon-scaffold_57-1575043694:124122..124239Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1491911889:125364..125641TCONS_00070616-exon-scaffold_57-1491911889:125364..125641Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1510915933:125364..125641TCONS_00070616-exon-scaffold_57-1510915933:125364..125641Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1575043694:125364..125641TCONS_00070616-exon-scaffold_57-1575043694:125364..125641Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1491911889:126282..126480TCONS_00070616-exon-scaffold_57-1491911889:126282..126480Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1510915933:126282..126480TCONS_00070616-exon-scaffold_57-1510915933:126282..126480Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1575043694:126282..126480TCONS_00070616-exon-scaffold_57-1575043694:126282..126480Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1491911889:127479..127999TCONS_00070616-exon-scaffold_57-1491911889:127479..127999Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1510915933:127479..127999TCONS_00070616-exon-scaffold_57-1510915933:127479..127999Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1575043694:127479..127999TCONS_00070616-exon-scaffold_57-1575043694:127479..127999Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1491911889:128759..128977TCONS_00070616-exon-scaffold_57-1491911889:128759..128977Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1510915933:128759..128977TCONS_00070616-exon-scaffold_57-1510915933:128759..128977Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1575043694:128759..128977TCONS_00070616-exon-scaffold_57-1575043694:128759..128977Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1491911889:129822..130024TCONS_00070616-exon-scaffold_57-1491911889:129822..130024Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1510915933:129822..130024TCONS_00070616-exon-scaffold_57-1510915933:129822..130024Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1575043694:129822..130024TCONS_00070616-exon-scaffold_57-1575043694:129822..130024Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1491911889:130696..130843TCONS_00070616-exon-scaffold_57-1491911889:130696..130843Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1510915933:130696..130843TCONS_00070616-exon-scaffold_57-1510915933:130696..130843Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1575043694:130696..130843TCONS_00070616-exon-scaffold_57-1575043694:130696..130843Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1491911889:132608..132802TCONS_00070616-exon-scaffold_57-1491911889:132608..132802Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1510915933:132608..132802TCONS_00070616-exon-scaffold_57-1510915933:132608..132802Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1575043694:132608..132802TCONS_00070616-exon-scaffold_57-1575043694:132608..132802Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1491911889:134229..134366TCONS_00070616-exon-scaffold_57-1491911889:134229..134366Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1510915933:134229..134366TCONS_00070616-exon-scaffold_57-1510915933:134229..134366Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1575043694:134229..134366TCONS_00070616-exon-scaffold_57-1575043694:134229..134366Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1491911889:135041..135176TCONS_00070616-exon-scaffold_57-1491911889:135041..135176Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1510915933:135041..135176TCONS_00070616-exon-scaffold_57-1510915933:135041..135176Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1575043694:135041..135176TCONS_00070616-exon-scaffold_57-1575043694:135041..135176Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1491911889:137046..137359TCONS_00070616-exon-scaffold_57-1491911889:137046..137359Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1510915933:137046..137359TCONS_00070616-exon-scaffold_57-1510915933:137046..137359Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1575043694:137046..137359TCONS_00070616-exon-scaffold_57-1575043694:137046..137359Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1491911889:137687..138161TCONS_00070616-exon-scaffold_57-1491911889:137687..138161Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1510915933:137687..138161TCONS_00070616-exon-scaffold_57-1510915933:137687..138161Clytia hemisphaericaexon
TCONS_00070616-exon-scaffold_57-1575043694:137687..138161TCONS_00070616-exon-scaffold_57-1575043694:137687..138161Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:123409..138161 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.482437 0.229459 0.269053 0.553518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.117671 0.378213 0 0 0 0.449709 0.179386 0.189624 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070616 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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