TCONS_00070536 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070536
Unique NameTCONS_00070536
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2001

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070536 ID=TCONS_00070536|Name=TCONS_00070536|organism=Clytia hemisphaerica|type=transcript|length=2001bp
gCCTGCGCTTCTCATGAGATGCTCAATACCGTGACGACAACAATCACTTG
GacAACGTTAGTGGACGGGAATCTGAAGATTATCACCCAAGCCGTAATAA
CTGGGCCAGTCACAAAGGCAGAACTCTATGCATATAAGAAGAACGGGTAT
GGCGAGTATATACTTGGAAACCAAACGGGAAAAACAATTACACCTCTATC
CTTACCTGTTTTTGCTGCCGAGGGGAAAGTTGGCTTTGAACTTGAAGGGA
ATGTAGGTGTCGATGGCATTAAAGTTTTCGCTTGCGACGCTCCATACTAC
GAGGCAGCATACGGGCCTTGGGAAAAGAATTGTGGAAACTCAACACGTAA
AAAATGGTGGAATTGCATGCAATCAAATGATGGACAAGACCCAACTCAAG
TCCACATCAATAACTGCTATGGACGAATGCCTCAAGAAGAAATTGACAAG
GGTTTCACCGGCATGCCATGTTATAATTACACTGAATGGACATCATGGGG
CAATTGTAGCGAGGCTGACGGATGTGGGCACGAGGCTAACGTCACCCGCC
GCCGTAATTGTACCATTGATGGATTCATTCAACCTGATGAAGTGTGTCTC
CAACTGAATTACACTTGGGAAATTAATGACACCAAAGCATGTTATAATTC
ATTTAAGCCTTGTTACCGATGGGAAGATTGGGGCCCTTGGGTGACAAATG
GATCCGCTTGTATGATCTTTGAAGAATACCGGCATAGATTGTGTTTCGGC
GATACACTCAGCAGTACGATTATCACAACAGAGCGTGACAACATCACTGG
CGTGGATGTCGAAATCGTTGCCATTGAGCCGGAGTGGGAAGACTCGAATG
ACATATCACATTGCCTTGAAGAAGAGTTGGAAAATCCGTGGCCTTATGCA
GAAAGGAACTTAACCGATCCTATCATGGTACACGATAAATGGGTTCGTGT
GAACGTGACAGTAATTCCTTGTTTACAATGGAACGAAACTTGGATTTCCC
TTGGTTGCAATGAAACATGTGACAACGGTACCGAGACATTTCGTCGGGAA
TGTATCGGGATGGATTTAACACCGATCAACGCGTCGGAATGTGAAGCGGC
GATAGACGACCCCGCACATCCACACGGCGAATTCAAGTATCAACCATGTG
TTGGTCTCCCATCGTGTGCAGAACCTATGACACAATGGACTGATTGGTCT
GATTGCGATCGTACATGTGGCACAGGAAATAAAATACGGACCCGAGAATG
CCAAGGAGATCCAGACGATTGTAAAGCCTACTCCAAGAATGAAGAAGAGA
CCTGCAACCCAACCCCTTGTCCAAAACATTCTGTATGGACGGAGTTCGAT
GAGTGGAGTGTTTGTTCTGGCAGTTGTGGTAATGGTACCCGTATGCGGAA
ACGTCAATGTTCACCACCTGAAAACGATGGAACTCCCTGTGGTTACCCCG
TGCCATCCAATTATGAACTTATCTACGAACATATTGAAGTTGAAGACTGT
GGTCATGATAGACCAGGTTGCCCAGGTTTTGTGCAAACATCAGGCAATTG
TAAGGATGGCTGCGAAGAATTGGGCCTTGAATGCGccattttgaataaat
taaacGGATCAGATATTGCTGACGCAGCAGGAATTAACTGTACAATATAT
ACAGATCACGAAGACGACTCTGAACCTGCTATCGGTCCAAATGGTGAATG
CAAGGGATTTAATAAGGTTCCGGTCACTAATAAATGTGAAGCTCCAGCAA
ACGCGGACCACAAAAGAGTATGCAACTGTGTTCCGACAGGCGAGAACACT
TTTGGAGGTTGGAGTATGTTTAGTCCATGTACTGCAACTTGTGGCACAGC
AACCAAGATCCGATACCGAATATTGGTTTCCGAAGACTTCGGTATCAAAG
AGTTTGATACGCAACCATGCAACCTTANcagaaaatatagcttttctcaa
tgttgactcattatttttttctgattttttgcacaatgatgcaaaatggc
a
Run BLAST on NCBI

transcript from alignment at scaffold_56:587463..602597-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070536 ID=TCONS_00070536|Name=TCONS_00070536|organism=Clytia hemisphaerica|type=transcript|length=15135bp|location=Sequence derived from alignment at scaffold_56:587463..602597- (Clytia hemisphaerica)
GCCTGCGCTTCTCATGAGATGCTCAATACCGTGACGACAACAATCACTTG
GGTACAGAACATGTTTCTTCAGAGACGAGAAAATAAAAAAATGTGGTGTT
TCCGTAAACCGGCCGGGTGAAAAAAAATAATTTTCTGAACCGGCTGCAGA
CTTCGTTAGTAGTTGATACATTAGTATTCAGGGCTTACTTCATACTGTTT
GTACATAAAAGTTATCTTTAAAGTTTTATTTCAATGATCTTAAGTTATCA
AAAATAGCAAAAAATAATATTTTCCGGCCGGCTGCATGAGAGCCTTTTTC
CTTGACCCGCATTCCGGAAACACTACATTTTTTTATTTTCGCCTAAGCAA
CTCACATACGTTTTAAAACTTAATAATAATGGACCGGGAGTGTCCTAATA
AGGTTCAGAAAATCGAAAAATTTACAAACGAGGGGTCTTTTTAATAACTT
AGTTATAACTCTAAGTAATAACTCTAAGTTTGTTAGAATTTTTCCAGGGG
TATTTTTGCAAATTTTGCCATTTTCCAGGGGGTGGTATCACACATTAATT
CTTTTTTGACTTGAAAAGGTTAGTCCACCCCCCTGTATGGTTTTTTTTAA
TGGGACTACATTTGGAACTACAGTTAACCCTCTCTAATTCGAACTAAAAT
ATTGGTCTCTCAGCTAGAACGTAGTATAAAATAGTCTCTGTCGAATATTT
CTCTTAAAAAATATCTGCAATCTGATTGGTTGAAAAGAGTACAATATATC
TTGTATTTTACATGTAAAAATATAAATTGACGAAAAGATGTTGTTGCATT
GTAGCGGTAGAAGCAATCTAACGTCACTTTGCTACAAAAGTGTCCTCTAA
CACAAAAAGTGCATTTTTTGGGTCACCCATAAACCAGTTATCAGACATTT
AACTATTACTTATTCAAAGAATATTATTGGTCCCTTGGAAATTCAACTGT
ACTTGGTGTAGCGAGCACTCTATCAGTACAGTTTTAAAATTTTTTAGACA
ACGTTAGTGGACGGGAATCTGAAGATTATCACCCAAGCCGTAATAACTGG
GCCAGTCACAAAGGCAGAACTCTATGCATATAAGAAGAACGGGTATGGCG
AGTATATACTTGGAAACGTAAGTTAAGTTTAATGATTATCTTAACCAAGG
TTTTTTTTTTTTTTTTGATAGGCTGGTGAATGAAAAATTAACACCGGAAA
TTTCTAGATTCTAGGCCGGCGGATTCTCAGCAAGCCAAGTCTATTTAGCG
TGAATATGTACTTGAGGCAGCGAAACGAATCTTTAGACCGGCGAATTGCA
ATTATTTTTGTGCCTTGTCTGCCTAAAGTCCATCCACCTCTAAGCAGGAA
TTATTTTTGAATACCATGTGGAAACTGCGTTTCTTTAATGGCTCTGACAT
GATTTCCACATTTTCAAATATTAAAAGTCACGTTGCTTTCCCATTGGATT
TACCTTAACGGCCAAAATTTAGTCGGCCCTAAGTGACTAAATTTTGGCTT
GGTGACTAAGATTAGGGCCGACTAAAAATTTAGAAATGGCCAAAACTTAG
TTATTAGTCGGCCCTTAGTGACTAAATCTTGACGAGGTGACTAAAATTAG
GGCCGACTAATAATTAAGGCCGACTAAGTTTTGGCTGATAAGGTACCTTC
CTGATTCTTTAAAAATGTTATACATAGATAAAAGATTATCAAAGAATTAA
AAAGTCCTAAAGAAGTTCTTACTTTTAACTTTCGGCTATCTAACATCTAG
AAATATTTTAAGTGTCAGTTGAGCCAATATACCAATGGAAGGAGCACCGC
TAAGGATTCTTAGCCTAATTCTAGAGACTCCGGCCACGTAAGATCTTTTT
AAAGATTGGAGAATATAACCTGACTAAAGAGTAACCGAATTCATCATAAC
TTTTACAATATAACATTAAATTGTTCGAAAATTCACGGGCTGAATTTTCT
TTTATTCTTCTAAAAAAAGCTTTCATATGTGTTATGAAAATACATTCAAC
AAAAAAGTAATTTACAATAGTATTTTGCACTGCACTCGGCCCGGCCTGAA
ACACTTATTGTTGTTATGGCCAAAAGTCTGATTTGAATTTTTCGCGAGGA
CAAACTTTTGCGAAAAAAGTATAAATTCACGAAAATCACGAAAATAAATC
CATACAAAATTTAACCCGTCCAACATTTGAAAAAATGTTGGATGAAAAAC
CAAAAAATTATTTTTTTTGAAAATTTTATATTGACACAAACCGGTCCAAT
TATCATCCAGCGTTCGAAAGTGGCATGTTGGACGACCGGTTTGCCATGGC
CTTAACAGTTATCATTAAAACAATAATGACCGGCTTGCGAGAGTTACACC
TCGGTCAACGCAACAACCTCGCAAGCTCGGTCGTTACTTGACCTCGGGCA
ATATTTCACAGTACAGCCCAAAAAAACCGGTCATTATTGTACTTGGTTAA
CCGTTTCCTTCAGCTTCGATTGATTTTTTGCGCTTTATGCAAAAACAATA
GCGAAAAAAAGCGAGAAACAAGGCAAAAAGATCAAAAATTGTTTTAATTT
ATGACGTCAAAAATAAAAAAATGAGAGAAATGATGTCAACGCAGTCTTCA
TTTTCCTTTGAAAAAACTGACGTCACGATGAATTTTCCTAAAAAGTCAAG
TTTGTGCAGTGTAGGCCCGACGTCATGTGAAAAGAACCAATTGCATTGCG
TGTGTAGCCGGCTTCGAAAAAGTAACCGGTTAACAAAATATAATTTTACA
CTTACATAATAACATAACACGTTTCATGAAAAAGCTCANATATAATTTTA
CACTCACATAATAACATAACACGTTTCATGAAAAAGCTCATCTTCCAAAC
CGTAAATAATTATTTTCTTCACATTTCAGCAAACGGGAAAAACAATTACA
CCTCTATCCTTACCTGTTTTTGCTGCCGAGGGGAAAGTTGGCTTTGAACT
TGAAGGGAATGTAGGTGTCGATGGCATTAAAGTTTTCGCTTGCGGTGAGT
TTCTTTGAGCAATTTGACAAAATACTTTAGTTAGAAAGGTATTCAATGTC
ATTAACTTATTTTGTGCTTCCTAACTTTTTTATTTTTTTAAGTATAAAGT
TCTGTGTTTAAATGTGCAGACGTACAGATTATAGGTGTGTACGTACATGG
GTAGATATTATCCACATTAAACTCTCGCTTATTCGAACTTTTATTATTCG
AATCTTTCCATAACTCGAACTTGTTTTATGTCCCCGTCAAGGAGAAACCT
TCTTGAAACACTTTCTATAATTCAAATATCTCAGTATTTCGAACAAATAA
CATTCCTCTTGTTTAAATTAGTGAGAGTCAAATGTAGATACTATCAGAAC
CATAGTGTGCCCCCCCCCCCCCCCAGAATAGGGGAGAGGGGTCTTGGTGT
TTTGGGTTGAAAATTTCCCACGTGGATTTATTTTCAATTTAATCATAATT
TAATCCTTTTTGTTATTATACAAGAATTTTTGTTTCGTTCCTTGAATTAG
TATAATTTTTCGTGGGGATAGCATTTTTAGCTGGAATCTGAGAGTCTGGA
TTGAGGGTGGGAATTTTAGGGTTAGGTGGGACCTGGAACCCCCTTGCACA
CTATGAGAGCGTTACAGTCCTGTTAACGTGATTCATTTCGACCGTGAAAT
GTTCTATTACACTTGTAACTAGGTCGGATTACTATGTACTTGAGTGTTAC
CTCACGTTTATTGCTTCTTAGTACACTCTATGCGCATTGTCTGTTTGATA
AAAAAATTCCCGTACGGAGACCTCTGCGGTGAAGTATGATTTATAAATAG
CAACACTTCTCTCATTGTCTCCCCTCTCTCTTCATCATTCCATTGGAGCG
GTCGGTTTGAAAAATCTCAAATGAGAAAAGACAATGACAACAGACCCTCT
ACGGCATGTGTACATACAAAGGTTGGATCGTCTCTTTGATAACAGTTTGC
GACTCGGTCATCACTAATCGATCATGTCCATTCTCTTTCTTCTAAAGCGC
TTTTGGAGAATTGATTTTCGATGAGTTGTCTTCTAGAGTCTCAGCTGGTC
TACATATTTTTATATACTCTTAGGTTCCAAATAAACGGGGGGGCCTAATT
GCCGGGGGTTGGAAATTGTAATTACAAAAACCTAAAAAATGAGGTAAATA
TAGGCTAAAATCAAGCTATTTAGAGCAAAATAAGGGCCCTTCTCTTTGAA
AGCTAAAAATTTTCGAAAAATTAACGAGCGGGGAAGGGGCGTTTATTTGG
AACCTAAGAGTAAGTATAAAAAATCCGAAAACAGGCTCGGAGATGCTTGG
GTCAATGGCTGGTTGGAAAAAGGCTTATAAGGATTATTATATCCCAAGCA
AAATTTTAGGGGGATTNATGGCTGGTCGGAAAAAGGCTTATAAGGATTAT
TATATCCCAAGCAAAATTTTAGGGGGATTCTGAAAATTCGTAAAATCCCA
TCTAACATCTAACAGCCAAAATCAGGAAAATACATTTTTTGTAGGTTCAA
GGTAATGCTTATTATATGCTTGAATTTTTTTTGCCATATCTGAGCCTAGA
TTTGATTCGCTATTAACGTTCTTCTTTCCTTTGTTTTAGACGCTCCATAC
TACGAGGCAGCATACGGGCCTTGGGAAAAGAATTGTGGAAACTCAACACG
TAAAAAATGGTGGAATTGCATGCAATCAAATGATGGACAAGACCCAACTC
AAGTCCACATCAATAACTGCTATGGACGAATGCCTCAAGAAGAAATTGAC
AAGGGTTTCACCGGCATGCCATGTTATAGTAAGTTATCATCCACCATGGA
AACTGGTGTAATGTGCGTTTCAACCAATGAGATTAGCTAGCGAGTTTATG
TATTTGAGATAAATCGAGAAAGTGGTGAAAATAATGTTGACGCAAAACAA
AGTGGAACTAGACGACGGTAAAAACACCAAAACACCGTCTTTGTTCAGGT
GAGCAAAGGCTATTATAGTGCTGCACGTCAACTATCGACTTTGTTATGCA
TCGACTTCACTCACTGTTGTCCTCGAATTCCCCCGATACATACTCGCTAT
TTAATAATTTGAAGGGGGGATAAACGCTATGGTTTCACTCACTATAAGAT
TTTCTTTGCGATTAATCTTGGAGTAAGTTGGAGCCTTGCCCCCTTGTTCT
GTCAGTTCTGACCTTTTTTGTTTCACCGATGACGCGCATCTTGAATGGAA
AATATAGTTGGCCTCTCAAAGTTTGGGTTCCCCTTCTTGTTTTATCTTTA
ATGATAACTTAGAATAAGGGAACGTCTTCCCAATTTTAATTTAACCCCTT
TATTTTTTCCCTACTTACTAAAGAATTTTATCAAGGTCACTGATCCTATA
CAGAGNAATTTAGCCCCTTTATTTTTTCCCTACTTACTAAAGAATTTTAT
CAAGGTCACTGATCCTATACAGAGGCGATGAGCTGGAGTTTTTATAAGAT
ACTTCACTAATTGGTCATTTGAAGTAATAGAGATGATGCGTTCTTTAGAA
AAAGTAATGAAATTAACTTAACGACCAACCAAATCACATGAGAGCTTGTA
GAAACTCCAGCTTGTCCCATACAGAGACGGCTTTTTCTACGTCTATTCCA
ATTAGCGACTTTTCCGAATGATTGGAATCGATTTTCGACGTCTATTAGCC
GGAAAGATCGAATTTGCGTCCAACACTCGATTATCTTCTTTTTTACCGAA
AATTGACAAGGTGTTNGAATTTGCGTCCAACACTCGTTTATCTTCTTTTT
TACCGAAAATCGACAAGGTGTTACACTTCACTCACCAAGAAGACTTAATT
GAATGAATCTCGGTCTTGAGTGGATGCTTGAGCATTGAGGATTTTAAGCT
ATCACCTTTTTTTATCAAAAGATTGGGTTTTAGAATACCTCAAGGGGAGC
AATTTTCTCGGGAAGAAATTTCGCGGTTGAGAGTAGCATCATCTAGGTTG
AGAGTTTTTAGTTTATAATATAACCTATTTTGCCCTATAAAGACCAAATT
TAGTGGTGAATTTTTTAAATCCTGAAACGTGTTTCGAGGATTCGTCGAAA
AACCGCGAAGTTAAATTTGGCAGAAATTTCCACGAAAATTTCTTCCCATA
ATGTATATTATAAAGCTGTATTTTTGAAAAAAGTAGCTGGGAGGTCTAGG
GACACTCTTAACCCCGAGTTGAGGGCAGAGTCCTGGTGCTGGTAGTAAGA
AGGCAAAGCCCCTAGAAAATTTGACTTTTATTGTAGCAACTCAGGCAAGA
TCCTAGGATTTTTGACAACTGTCTGACTTTTGAGCCACATATTAACACGA
TTTATAAGAAAGCTAGCCAGAAAATCAGTGCACTTGCGAGGGTAGCACCG
TACATGAATCAAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGTTAGCAATAGAACTTTTCAAATGTA
AAAATAACATATCAGATCTAACTAAAGAAATTTTCAAACATGATGAAAAT
ATCAAAGTAAATCGCAAAACGCCTTTTTTCAGATCAAGAGAAATAAACTC
TGTTTTTCACGGTTCAGAGTCACTTTCATTTTTAGGGCCAGAAGTTTGGG
AATTAATTCCGGATGAGTATAGATATATAGTCGATCTTAGTATTTTTAAG
GAAAAGATTAAGCAGTGGAGGCCTACATCATGCCCGTGTAGAAACTGCCG
GACCTATATTGACGGTGTCGCCTTTTTGTAATCACCTTACAAATTGTAAA
GTAGCGTTGACTTTTATTAGCCTTTGTTGCTACCTGTTCGTCAACTTGAA
ATAAACTATTACATACATACATACATACATACATACATACATACATACAT
ACATACATACATACATACATACATACATACATACATACATACATACATTG
TAGAATTAATTGCTGAAATATTGGGCTCTTCCAGAAAATTTTTGTACATG
GCTCCCCATGGGGTGGTGGAGGATATATTGGATATTTTGTCCGGGTGTAG
TAAAAAATCTGCAAAATTTGCCTTGTTTTGGGGGCAAATTTGCTCTGTTT
AGAAAAAACGTTTTATCCTCCACCCCGCCCCATATTCAAATTTTTTCTGG
AAAAGCCCAATACTTTCTTTACATTTTTGCTTTTTTCTTGTTACCTTGTA
GCAGAAAATTTGCAGAAATATTTCTGGCAGGTTGTGTAGAACATAATTCT
CTATCGCTTTAGATTACACTGAATGGACATCATGGGGCAATTGTAGCGAG
GCTGACGGATGTGGGCACGAGGCTAACGTCACCCGCCGCCGTAATTGTAC
CATTGATGGATTCATTCAACCTGATGAAGTGTGTCTCCAACTGAATTACA
CTTGGGAAATTAATGACACCAAAGCATGTTATAATTCATTTAAGCCTTGT
TACCGTAAGTAGTTTTCCTTGAAAATAACAGTTTCCAAGTAAAAATATTT
AAGAGCGCTTTAACTCTATTATTACAGTTGACACTTTAAAACTACATGAA
ACTACGTACAAATGTTCTCTACCATGATGGAAAATAATAGAAAAAGAATT
TAAGTTGATGACGTCATCACACATGTGATGATGCTAAACACGACGTATAT
GAAAAATATCTTCAATCTGATTGGGTAAAATATTTATATTTTGTATTTTA
CATGCATCAAAATATATATTGACAAAAAGATGTTATTGCACTGAAGTGAT
AGCAGGATCATAGCCTTTTTCTAACGACATTTCGCTATGAAAGGTCAAAG
TGTGTTTNCGTTGCACTGAAGTGATAGCAGGATAGCCCTTGTATAACGTC
ATTTCGCTATGAAAGTGTGTTTTGAGATTTTTGGAGACTTTGGATGCTCA
AAGCTCGAATTATAATTTATCAGGTCATTGTCACTCACTAAAAGTTATCA
CATACAGTAAATTTCTGAACTCTTTGATTTCCTTTCTTACATTTAAAGGA
TGGGAAGATTGGGGCCCTTGGGTGACAAATGGATCCGCTTGTATGATCTT
TGAAGAATACCGGCATAGATTGTGTTTCGGCGATACACTCAGCAGTACGA
TTATCACAACAGAGCGTGACAACATCACTGGCGTGGATGTCGAAATCGTT
GCCATTGAGCCGGAGTGGGAAGACTCGAATGACATATCACATTGCCTTGA
AGAAGAGTTGGAAAATCCGTGGCCTTATGCAGAAAGGAACTTAACCGATC
CTATCATGGTACACGATAAATGGGTTCGTGTGAACGTGACAGTAATTCCT
TGTTTACGTACGTTGAAATTTTGTATTTAATTTCAAGTAGGGGTTTTGGA
ATATTGGACATGATTTATACTAACTCAATTTCCAAATTTATTTCAGGCAT
TAAGACCTTATTCTAATACATATTTCCACCTGCACCGCCTATCTGGTTAA
CTAAGTTCAAGATCTAATTTGATTTCCTTCCCGAGACACCAACACCCGAA
ATGCACATTGAGTTTGAAATGAATCTTCAACTATTCTCAAGCAACAAAAA
GTGAAGCCTTAAGTTTGCCCCGCACTAAATTGTGTGAAAACCATACGGGT
CACGTGTGTTAGGATGGGGAAAAAATTTAAGATAATTTCCCATCCAGGAG
TTCCGTATCTAGCCCCTTCGGGGCTTTGAAATCAATGGGAATGCACTAAT
TAGCCTGTATAATAACTATACAATGGACTCTCTATCTCATCTCAGAAATA
GTGTATTTGGACAAAATATTCTTTTTTAATGTTTGAAGATCATAATATTG
TGGAATAACAATCAGTTTTCTCTTAAAAAGAATCCTGCATTAATCTTGCA
TGATTAATTCAGAGTGGGGGGATTGGGATGAAAGAATTTTTCGTTCTTTT
TGAAATTTGTCGTTCCAATCTTAGTTAATGTAGGATTCTTAAGATTCACT
CCCTCCATAATGAACGGTTTAATAGGTCTGGGGTTGAAATTAGAAAAAAA
TTATTTTGTTAATTCTTCTTACTCAGCATAGGCATTCTTGAATACCATAA
AAATGTCTTAAATATCTATCTCATTTACAACAGAATGAAATAACACAATC
TCAAAATTTAAAGTTAATGGGTTAGACAAAATTTTAACATTTTTAACACT
TCTCCATTTAAAGATAAGTTATGTTAATCATGGAAGATATAATCCCACCG
AAGTCTTATAAAATGAATGTGAAGTTATTTTCAATAAGTTTTCCTTTCCA
ACAGAATGGAACGAAACTTGGATTTCCCTTGGTTGCAATGAAACATGTGA
CAACGGTACCGAGACATTTCGTCGGGAATGTATCGGGATGGATTTAACAC
CGATCAACGCGTCGGAATGTGAAGCGGCGATAGACGACCCCGCACATCCA
CACGGCGAATTCAAGTATCAACCATGTGTTGGTCTCCCATCGTGTGCAGG
TAAGACCTCTAACCTAGTATGAGGTTTCTCATCATAAATACGCAGAAATG
GGCCATTACATTTTATATCCATACAGGGGGTGATCATTTACAGAGGGTAA
TCTGAGAAAAGTTTCCAAGGGGTTAGAAGGTTGTTCTAAAATTTTCCAAG
GGGTAAAAGACTGATTTTAGTTCGTCTATCTTCACTTTAAGGTACGAAAA
AAAATCTTTCCAAAGGTAAATTTGCAAATTTTGCCATTTTCCAGGGGGTA
TCTACACATTTTCAATAATTTCTTTGTGACTTAAAAAGTGCCCACAAAAT
AAATGCGAAGAAATAAGAATTTTTGTCCAACTATATTCACTCAGGAGATT
CGGGTGGCAGAGTAGCATATGCATTTCGTCCTTTTCGGGACTTGTCAGCA
CTGCGTATTGCACCCTGGTTGGCAAGATCGATTTAGCCAGCATCTCTAAA
CCACAAAATCACTTGTGGTTCAAACTGAGCGAGAAAGTGGACAGAAGGGA
AATTTCCTACGGAATTCTTTATTGAATTTTTTGGAGCCAAGCTTTATAAC
TTTCTGTTTAATCTATCATTATTAATCATGAATGTTTTCTTTGCAGAACC
TATGACACAATGGACTGATTGGTCTGATTGCGATCGTACATGTGGCACAG
GAAATAAAATACGGACCCGAGAATGCCAAGGAGATCCAGACGATTGTAAA
GCCTACTCCAAGAATGAAGAAGAGACCTGCAACCCAACCCCTTGTCCAAG
TAATAATAGATACCTTGATTTCTAGTGGAAAGAAAATTTAGCGGATTTGG
CCAAAATCCGCCTAATTAAGTTCCCACCAAATTTAATTCTTTTCTCGCCA
TCAGCCAAATTAAAAACCCGCTAAATTTTGATTGCTGTATTCATTCCCCA
TTCCCCTTTTTTTGGCCAGAAATATCTTTCACCTACCAATAAAATTTCTA
AAAAATTTAATTTTGCAAGCCATGCGCCAAATTCCCTTTGAAAAAACTTC
TTCAGCCATGGTTCAAATATAATTCCACCGTAATTCCATCCCTAAAAGTA
GATTGAGAAGATACTTTACGTAGGAAGGCTAGTATTTTAAGGCTTTTAAG
CAAGTCTCTCGATTATTTTAACAATCATGGTCCAGGCCCACAGTCGACTT
GGCTATCTATGGTGAGCTGACGGAACATGGAAAGGGGAAAGAATTTAAGT
TCGAATCCCTTGTTTGTGGCGCTGACGCCTTACACTACATCAACTTGTCT
GAATTGGGCCCATAATAGCATAATTATATCCAATTTTAAAACTGTAATTG
AATCGTTCGAAGGTTGCACGTGACTAGTCTTTTCTTAAACTGGTAATATA
ATTTAATGTAATGTCTCGGTCAAGCTTAATATATGCGAACTTCCTTCCCT
AAGCTTGACTTTTGAAAGTTAAAAGGCATCAAAATTTTTAATAAAAATTG
ATATCCCAGCTGGCACACAACGGTGTTTTAACGTTCATATAACGTTACAT
GGACGTTGTGAACGTTAGATGAACGTTGAAACAACGTTGTGTGCCAGCTG
GGATATTCTTTGTTTATAACTTTCCCAAGGCCGACCAAGCCGTCAGGCGA
AGTCCCTCCGCTTTCATCCAGAGTACCCCTACAGGGCCCCCGGGAAGGCT
TCACACGGCCTCTAAACACCTCCGGTAGAGGACTGAAAGCTCTCGCTCAA
GCTGAGCTGAAGCTCTTGCTCAAAACCAGCAACCCTCAACAGTTCTTTGA
AGCTTTAATGTTCGAAAAACTATATTTTAGAACATTCTGTATGGACGGAG
TTCGATGAGTGGAGTGTTTGTTCTGGCAGTTGTGGTAATGGTACCCGTAT
GCGGAAACGTCAATGTTCACCACCTGAAAACGATGGAACTCCCTGTGGTT
ACCCCGTGCCATCCAATTATGAACTTATCTACGAACATATTGAAGTTGAA
GACTGTGGTCATGATAGACCAGGTTGCCCAGGTGACTCATGTTTAAGTTA
TTTTCACGAAATTTCAAGATAAGTTTCATCCTTGAAAGTGTGGGTGGTTT
GCTAAATATCAAAAAATGGAAATAATTTTACTGGGAATAGAATTTCTACA
GCGACCGATTTTTCGATTTCTAAAATGCAATAAGTAATCATCAACATTTT
AATCGAGCTCTATTATCTACCGGGTGCGCCACAAAAAAGTTTCTCTCTTT
GAAACTGAATCTAAAAATTTTAAAAGAACCATTCCTATTTCATTGAAAAG
AAGAAAGATAAACTTAAATTTTGATGGGTCATCTATTAAATTCGATTCAT
TAGATCAAAAGTTATGCTCAATTGAATGAAAAGTTACTTTCAGAAAGTGC
TCGAAATCGTTAAAGATCGACCTATCAAATTTTTATTTTAAAATTGGCAA
TCACAATAGCCTTTACATGATTAAGAGCATTTTTCAGTAACTAAATACAT
AAATTTTGAAACTGAAGAATCGAATGGGTTTAAAATGTTCATCAAAATCA
CTTTAATTTACTTTTACCGAAATTTTCCTCAGAATTTTGGTTCTAGACTG
AATAAAGTCTATGTAAGACTGGCTCAAAACCCGTATTTGATGTATTTTTA
TGAACTTTACCAGATTTGTTGGCCTTTTTTGACGAATTTTCTTCATTTCA
TTGAAATTCAACCTTCCTTTATACAACAAAAGGTCATTTAGACAGCTAAT
TATCATTTTTAATGACTGAAACGAAAATTATGATGTATTATGTAATTATG
CTTCTGTTTGATTTGATAGGTCTATTTTTAACTTTTTTCAGCACTTTCCG
AAAGTAAGCTTTTCTATTCAATTGAGCATAACTTTTGATCTAATGAATCG
AGTTTAATAGATGACCCATCAAAATTTAAGTTTATCTTTCTTCTTTTCAA
TGAAATAGAAATGGATCTTTTAAAATTTTTACACTTCAAGAAAATTAGTT
TCAAAGAGAGAAACTTTTTTGTGGTGCACCTGGTATCAGAGTTTATTCCG
ACATAGGCAACGAAATTTATTTTCTGCATGATTTTATTTACATTTTTCCT
TCTTGATTTGAACAACTCCAGAGTAGCATACGATTATTTCTTACTTTAGT
TCCTTAAGAATGTCTTGGTCTATGCTAACAAAACTCTTCTATATTTTCTC
ATTTTGCAGGTTTTGTGCAAACATCAGGCAATTGTAAGGATGGCTGCGAA
GAATTGGGCCTTGAATGCGCCATTTTGAATAAATTAAACGGATCAGATAT
TGCTGACGCAGCAGGAATTAACTGTACAATATATACAGATCACGAAGACG
ACTCTGAACCTGCTATCGGTCCAAATGGTGAATGCAAGGGATTTAATAAG
GTTCCGGTCACTAATAAATGTGAAGCTCCAGCAAACGCGGACCACAAAAG
AGTATGCAACTGTGTTCCGACAGGTATATTTTTTGTATAATTTTAAAACC
GCTTTCGGTGACGTCCCGAAAGCCCTTTTTTCGATGGATAGCTATCCGGA
CTTAATAGCCAAGCATGCAGGTACTTCCCGGCTGCGGATTTAACCCACGA
ACTTTCGCCAATGATATAGTATAGCCCGAATGGCTAGATAAGCGGCCTTG
GTCAAAAAGTAAAGCTCGTCTTTGGAAGGATTTCCTACCAGAGTCACGTG
ACATTACAATATAATTTCAGCAATGGACCAATCAGAAGCTTCGCGGGTTT
TGGAAAACAATATCAACAATATTTTTTCCGATATTCACTTTTTTTTGCTG
AAGAAAGCTTAAAGTTGCCTATCTAGCCCTTCGGGCTTTACAAATATCTG
TGCCTTATGCACTCTCGCCGACTCCTCTACCTTTACACTACGGTGTCACA
GTGTCATGGCAGGTTCCCTCCTTTAAGTCCCCCTTTTTTTCTCTCTTTTT
TTTATACTCTGCTGCTTCTATTAATATTGAAGGTATCTCTTAGTCCAATC
CGTTTATTTGAGGCCAGTGAAACCAGCAAGGTGATAGAAAAACACGTTAT
AGGCTCATATGCGAAGTCTAACAAAATTCTGTTTGTTTTCATGTCAGGCG
AGAACACTTTTGGAGGTTGGAGTATGTTTAGTCCATGTACTGCAACTTGT
GGCACAGCAACCAAGATCCGATACCGAATATTGGTTTCCGAAGACTTCGG
TATCAAAGAGTTTGATACGCAACCATGCAACCTTACTAACTGTCCTAGTA
AGTTGATTAGTTAATTATATTTTGAAGTACCTTCAAGGAGAAAATATATT
CATACAGTGTGTCCCAATAAAAGTGGACAAATTTTTAACTGCAGAACGAT
AAATTACGCGTGCGTATTGCAATGCAGGATTCTTTAGAGGAATAGACTGT
TNCGGCAGGTTCCCTCCTTTAAGTCCCCCTTTTTTTCTCTCTTTTTTTTA
TACTCTGCTGCTTCTATTAATATTGACGGTATCTCTTAGTCCAATCCGTT
TATTTGAGGCCAGTGAAACCAACAAGGTGATAGAAAAACACGTTATAGGC
TCATATAGTAGGGGGAATTTTGTTCGATTTTTTGGAATCGCTCGAATGTT
TTGTTAGAAGCACTTGTTATATATTTTTGGAAAGCTAAGGGGTAGGNGTC
TGTAACTTTCGATAGTCAATATAATTTACTTATGGATAAAATGCAACCCC
CTGGCTCTTAGGGGGAGGGGGGGTGCAGAACCTAAAGTTCTGGCTGGGGG
CTCTTTTTCCCTAAGATCATTGACATTCGCTTTTGACTAATTTTTTAATT
ATTCCTTTCTTCTCTTTCTTCTGTTTTTCTTTCTTTTTCAAAACGATGAG
ATGCTGCCTTGAATATGACTAAAGTGCTCTAGCCAATGAACTACATCCTA
TTAAGATGGCTGGAATCGAACCTGCTACCTCCTTAGCTAGTTCAAGACTT
TTATCTCATTAAATTATTTTATTGTTGTTCTTTATAAGTTCTGATAGGTT
AGTTCTATTATTCTTTTACTTTTATTTTTGGACCTACCTCCGGGTACCCC
GGTGGAGGTTCTATAAATTAACCCATGTCCGTTCGTTCGTCCGTTCGTCC
GTCCGTCCGTCCGTCTGTTACCAGCTTTTCTCAGGATTGGCTCCTTAGTT
TTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCCAGAACGTGA
CAGAGCCCGATTTTTGAGAAAAAATTTATTTGGGCAAATTTGGGCCAAAA
ACCACCTAAAAATAGGTTTTTTTGGACTTAGTGCAAATCCTGTCATTACT
TTTTTCTGATTTTTTGTACAAAGATGGAGGGCAAGATTCTCTAAAGAATG
GCTGAAGTGGTTTTTCCCGGAAAATNTTACTAATATGCGAAGTCTAACAA
AATTCTGTTTGTTTTCATGTCAGGCGAGAACACTTTTGGAGGTTGGAGTA
TGTTTAGTCCATGTACTGCAACTTGTGGCACAGCAACCAAGATCCGATAC
CGAATATTGGTTTCCGAAGACTTCGGTATCAAAGAGTTTGATACGCAACC
ATGCAACCTTANCAGAAAATATAGCTTTTCTCAATGTTGACTCATTATTT
TTTTCTGATTTTTTGCACAATGATGCAAAATGGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043900XLOC_043900Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070536-exon-scaffold_56-1575043694:602547..602597TCONS_00070536-exon-scaffold_56-1575043694:602547..602597Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1575043694:601481..601600TCONS_00070536-exon-scaffold_56-1575043694:601481..601600Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1575043694:599604..599718TCONS_00070536-exon-scaffold_56-1575043694:599604..599718Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1575043694:597820..598008TCONS_00070536-exon-scaffold_56-1575043694:597820..598008Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1575043694:595044..595235TCONS_00070536-exon-scaffold_56-1575043694:595044..595235Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1575043694:594191..594499TCONS_00070536-exon-scaffold_56-1575043694:594191..594499Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1575043694:593049..593243TCONS_00070536-exon-scaffold_56-1575043694:593049..593243Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1575043694:592299..592451TCONS_00070536-exon-scaffold_56-1575043694:592299..592451Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1575043694:591067..591267TCONS_00070536-exon-scaffold_56-1575043694:591067..591267Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1575043694:589625..589888TCONS_00070536-exon-scaffold_56-1575043694:589625..589888Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1575043694:587463..587674TCONS_00070536-exon-scaffold_56-1575043694:587463..587674Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1510915933:602547..602597TCONS_00070536-exon-scaffold_56-1510915933:602547..602597Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1510915933:601481..601600TCONS_00070536-exon-scaffold_56-1510915933:601481..601600Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1510915933:599604..599718TCONS_00070536-exon-scaffold_56-1510915933:599604..599718Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1510915933:597820..598008TCONS_00070536-exon-scaffold_56-1510915933:597820..598008Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1510915933:595044..595235TCONS_00070536-exon-scaffold_56-1510915933:595044..595235Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1510915933:594191..594499TCONS_00070536-exon-scaffold_56-1510915933:594191..594499Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1510915933:593049..593243TCONS_00070536-exon-scaffold_56-1510915933:593049..593243Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1510915933:592299..592451TCONS_00070536-exon-scaffold_56-1510915933:592299..592451Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1510915933:591067..591267TCONS_00070536-exon-scaffold_56-1510915933:591067..591267Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1510915933:589625..589888TCONS_00070536-exon-scaffold_56-1510915933:589625..589888Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1510915933:587463..587674TCONS_00070536-exon-scaffold_56-1510915933:587463..587674Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1491911889:602547..602597TCONS_00070536-exon-scaffold_56-1491911889:602547..602597Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1491911889:601481..601600TCONS_00070536-exon-scaffold_56-1491911889:601481..601600Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1491911889:599604..599718TCONS_00070536-exon-scaffold_56-1491911889:599604..599718Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1491911889:597820..598008TCONS_00070536-exon-scaffold_56-1491911889:597820..598008Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1491911889:595044..595235TCONS_00070536-exon-scaffold_56-1491911889:595044..595235Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1491911889:594191..594499TCONS_00070536-exon-scaffold_56-1491911889:594191..594499Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1491911889:593049..593243TCONS_00070536-exon-scaffold_56-1491911889:593049..593243Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1491911889:592299..592451TCONS_00070536-exon-scaffold_56-1491911889:592299..592451Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1491911889:591067..591267TCONS_00070536-exon-scaffold_56-1491911889:591067..591267Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1491911889:589625..589888TCONS_00070536-exon-scaffold_56-1491911889:589625..589888Clytia hemisphaericaexon
TCONS_00070536-exon-scaffold_56-1491911889:587463..587674TCONS_00070536-exon-scaffold_56-1491911889:587463..587674Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_56supercontigscaffold_56:587463..602597 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.817592	1.49851	0.892133	0.517444	0.639713	0.323981	0.164456	0.532418	0.686341	0.608824	0.578544	0.620956	15.8943	22.3993	3.02596	1.92711	0.405703	0.300013	35.4889	33.4566	0.802244	0.558757	1.63342	2.97746	5.82221	5.24618	0	0.152754	0.329642	0.376979
Blast
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BLAST of TCONS_00070536 vs. Swiss-Prot (Human)
Match: AGRB2 (Adhesion G protein-coupled receptor B2 OS=Homo sapiens GN=ADGRB2 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.755e-17
Identity = 68/257 (26.46%), Postives = 102/257 (39.69%), Query Frame = 1 
Query: 1141 QPCVGLPSCAEPMTQ-WTDWSDCDRTCGTGNKIRTRECQGDPDD--CKAYSKNEEETCNPTPCPKHSVWTEFDEWSVCSGSCGNGTRMRKRQCSPPENDGTPCGYPVPSNYELIYEHIEVEDCGHDRPGCPGFVQ---------TSGNCKDGCEELGLECAILNKLNGSDIADAAGINCT-IYTDHEDDSEPAIGPNGECKGFNKVPVTNKCEAPANADHKRVCNCVPTGENTFGGWSMFSPCTATCGTATKIRYRI 1872
            +P + +    +P  + W+ WS C  TCG G ++RTR C   P    C    +      N   CP H VW E+  WS+CS SCG G+R R R C PP++ G  C  P           ++ + C      CP   Q          S +C +G ++   +C+         +A  A   CT   TD  + S      N EC                           P  ++ +G W+ +S C+ TC T  + R+R+
Sbjct:  299 EPGLYMAQTGDPAAEEWSPWSVCSLTCGQGLQVRTRSCVSSPYGTLCSGPLRETRPCNNSATCPVHGVWEEWGSWSLCSRSCGRGSRSRMRTCVPPQHGGKACEGP----------ELQTKLC--SMAACPVEGQWLEWGPWGPCSTSCANGTQQRSRKCS---------VAGPAWATCTGALTDTRECS------NLEC---------------------------PATDSKWGPWNAWSLCSKTCDTGWQRRFRM 501
The following BLAST results are available for this feature:
BLAST of TCONS_00070536 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRB21.755e-1726.46Adhesion G protein-coupled receptor B2 OS=Homo sap... [more]
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