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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070417 ID=TCONS_00070417|Name=TCONS_00070417|organism=Clytia hemisphaerica|type=transcript|length=908bp
GGAAGCACTTGCTGAGCTCCAAACCCCTGTACCTTCGAGCGCTTAGGTCA
AAGACCCTAATATCAAAAAATGCTCTTTGGCCAGGTGTCCAGAACCCAGT
TGCGCTTACGTCAAGTCGTGCTCCTTCGGACGTATTCGCGGTTTTGTGCG
TCAGTCCTTCGCCGTCAAGGGTGATTGGTCTCGGCTCGTACGTTTTTGAT
CGCTGCTTTAGTTTTTGCTTCATTGTCATTTGGTGGTTGGAGGTTCAATA
TTTGGTTTTGTAGATGTTTGGTGAATTGTCTCGAGTTTTCGTGTTCGATG
GGTGCGAACTCACATACGTTTTTGAGACCGAGGCCTCCCAGTCTAGGAGG
TAATGATAACAAGTCTCTTTCTAAGTCATTTACAACNcggtaagttactg
ggagctgagagtaggtgtggcgctccacctcagcattcggtctcccaggt
ctagcgcaaatagaaaaggggatagactccctcactctcggctccgccga
cagccattagatgaatatacttactttacTAAGACCCCTGAAACCTCCCC
CAAATGGAACGGGATCCCCGAATACATAACAAAGACGATCTCAACAAGCT
GAATGATATCTTTGATCAAATAAACGAAATTGATTCATGGAGACGTACAC
CACGTTTTTCAGCAAGCATCACGTCCAATCTTTTGTAGAATGTTTGGCAT
TCACGTCCTATACCTCCGTTTGTAGAAAATACTAATGGAGTGAAAGTACC
ATTTTCAACACTGTTCACACGTTCATTGTAATGTCtctttttctcatttt
cgttTCGATGGAAGCACTTGCTGAGCTCCAAACCCCTGTACCTTCGAGCG
CTTAGGTCAAAGACCCTAATATCAAAAAATGCTCTTTGGCCAGGTGTCCA
GAACCCAG Run BLAST on NCBI transcript from alignment at scaffold_55:199027..199934 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070417 ID=TCONS_00070417|Name=TCONS_00070417|organism=Clytia hemisphaerica|type=transcript|length=908bp|location=Sequence derived from alignment at scaffold_55:199027..199934 (Clytia hemisphaerica)
CTGGGTTCTGGACACCTGGCCAAAGAGCATTTTTTGATATTAGGGTCTTT
GACCTAAGCGCTCGAAGGTACAGGGGTTTGGAGCTCAGCAAGTGCTTCCA
TCGAaacgaaaatgagaaaaagaGACATTACAATGAACGTGTGAACAGTG
TTGAAAATGGTACTTTCACTCCATTAGTATTTTCTACAAACGGAGGTATA
GGACGTGAATGCCAAACATTCTACAAAAGATTGGACGTGATGCTTGCTGA
AAAACGTGGTGTACGTCTCCATGAATCAATTTCGTTTATTTGATCAAAGA
TATCATTCAGCTTGTTGAGATCGTCTTTGTTATGTATTCGGGGATCCCGT
TCCATTTGGGGGAGGTTTCAGGGGTCTTAgtaaagtaagtatattcatct
aatggctgtcggcggagccgagagtgagggagtctatccccttttctatt
tgcgctagacctgggagaccgaatgctgaggtggagcgccacacctactc
tcagctcccagtaacttaccgNGTTGTAAATGACTTAGAAAGAGACTTGT
TATCATTACCTCCTAGACTGGGAGGCCTCGGTCTCAAAAACGTATGTGAG
TTCGCACCCATCGAACACGAAAACTCGAGACAATTCACCAAACATCTACA
AAACCAAATATTGAACCTCCAACCACCAAATGACAATGAAGCAAAAACTA
AAGCAGCGATCAAAAACGTACGAGCCGAGACCAATCACCCTTGACGGCGA
AGGACTGACGCACAAAACCGCGAATACGTCCGAAGGAGCACGACTTGACG
TAAGCGCAACTGGGTTCTGGACACCTGGCCAAAGAGCATTTTTTGATATT
AGGGTCTTTGACCTAAGCGCTCGAAGGTACAGGGGTTTGGAGCTCAGCAA
GTGCTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070417-exon-scaffold_55-1491911889:199027..199934 | TCONS_00070417-exon-scaffold_55-1491911889:199027..199934 | Clytia hemisphaerica | exon |
| TCONS_00070417-exon-scaffold_55-1510915933:199027..199934 | TCONS_00070417-exon-scaffold_55-1510915933:199027..199934 | Clytia hemisphaerica | exon |
| TCONS_00070417-exon-scaffold_55-1575043694:199027..199934 | TCONS_00070417-exon-scaffold_55-1575043694:199027..199934 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_55 | supercontig | scaffold_55:199027..199934 . |
Blast
The following BLAST results are available for this feature:
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