TCONS_00070401 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070401
Unique NameTCONS_00070401
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2082

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070401 ID=TCONS_00070401|Name=TCONS_00070401|organism=Clytia hemisphaerica|type=transcript|length=2082bp
TGGAGATGACAGACAGGAATATGGAGATTGGCTGCTAGATAATACTAAAG
GGAGTTCATAACAGAAAATGGGGCAAGGCACATCTTCAGAGACAGATGCT
AAATTGAAAGCATTAGTATCCAAGCTTAGCAAGCTGGAGATTAAAGATAT
TGAAGCAGTTTTCATGGAGTTATCTACTACTACTGATGAAGGACAGTTTG
TTATCCAACAACCCTCATGGCTCAATCGTGATAAATTTGCTGAAATATTT
GGTTTAAATGATCTGATTGTGGAACAGTTATTTCAAACATTCGACCGTGA
CAAGAATGGTATTATTGATCTGCAAGAATTTGTTACTGGTATGGCATTGT
GTTTGCATGGTGGTATCAAAGAAAAATGTCACTTAttattcaagattttc
aatttgAATGGGGATGAAGGGATTAGCCGTGAAGAGTTATCGACAGTTTT
AACCAGTTGTTTGATGTCAGCCAATACCTTGCTTCAAAGCACATTGAAAA
CCGAAGGGCTGTCAGCATTTGAGAGTCAGCTAGCTGATCAAACTGGTGCA
GCTGTTATGCTTAATGTTGTGGTCGATAAAATTGTGAAGGAAGCATTTGA
CACTTGTGATGTTTCTAACACTGGAAAGCTGGAAATTGATGAGTTTGCCA
AATGGGTTCATAAAAATCCCAAATTGATGAACAATATTTTTGTATTGCAA
TGTCCTAAGCCAACACCATCACCCATTAAAAgctcAGAAAGTAGTTTTTC
TGTTTTAACAATGGCTGGCCAGGATGAAAACATCCCTGAGGAAAACTCCA
AAACGAAGATTGAGATGGCTAGATCAgTTTCTCAAATAACAGAAGAGTCG
ACAAAATCATTACTAGAACTTAGCCAAGAAACCAACACACCGACAACTGC
TGGTGATCTATTCAAAGAAACAAGCCAACCTTCTGCTGACGGTGCAGATT
TTTTCGACACACTTGGTTCACATAATGAAACACCTTCTCAAGCACCAGCC
GGTCAGTTACCACGTCCAGCTAGTGAATTATTCCTATCCTCAGGAAATGA
AAACTCAAATATAGATGGTTTGCAGCACAGTACAAGCCATAATGATCTCG
CTTCCTTGAAACAACAGCCCGCTATCAGCCATTTACAAAACGCAGAGAGT
ATGCAATCAATAGCTTTATCCAGAGACTCACTTGCACCGGATTCGCACAA
TGCATCACAAGAGTTAGGAACCTCAACAGAAAATATCACCTCATTAGTTC
CTCAACATCATACTGAGCCAACAATACAACTTCACCAAGAAAACCAGCAA
CAAACACTGCCCCAAGTTGATCCATCCTcatatcaacaacaacaacaaag
ccCCACCCAAGCACAACAACAACCACCCATCCAACCGCCCCAGACCACCA
TGCAAACACAATACCAACAGCAACAAAAAACAGACCATTCACAAAGCTTT
GATAACCCTGCGCTAGCATTGGAGACAGAAGTCAACAATGAAGTGTTTCC
AGAACAACCAGCCGTTATTCAAAACACTATTTTGGACAATAGCCAAGTAT
ATAACGACAAATTAGTGGACCCGGCACAAGAACAACGGCGTCGTGGATGT
TCTTTTTGGCAACCGAGCACTAACACTGAACGTCTTCTGCAACAATACAA
ACAAGGTGCTATCCCTGAGATGAATGTTCTTACGTCTCCATCCGTCTTGG
TTGAGAATCTCATGGGTGATCCAGTGAAAGACTTGGTACGAAAATATTTG
GGTGAGCAAGAAGCCAACAAGAGACCAACACTGATGGCCAATCAAGTGGA
GATGAATGAAAATGGATTGAGAAGATTATTGGCTGCAGGATGTTGGAGAG
CGGCAGTGGACTTTACCACTAAATATCTGACAGCGCACGGCCAAGGGCTT
GTCTCCATGGGACAAAACCAAAGATCCAATTTGAGCCCTTCCATTTTACA
GATTTGGTTCGTACGAATCGCTCTACTGGTCAAGTTGAGAATGTTCAGTA
GTGCAGAAGCAGAGTTGAGCGCCTTCAAAGAATTTGACGCCCCAGATCTT
TATTATCAATATTACCCTGAATTATATCAAGG
Run BLAST on NCBI

transcript from alignment at scaffold_55:152096..165318-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070401 ID=TCONS_00070401|Name=TCONS_00070401|organism=Clytia hemisphaerica|type=transcript|length=13223bp|location=Sequence derived from alignment at scaffold_55:152096..165318- (Clytia hemisphaerica)
TGGAGATGACAGACAGGAATATGGAGATTGGCTGCTAGATAATACTAAAG
GTTGACAAGGTTGACTGTTGAATCGATTGGACATTTTCATTGAAATATCG
AAAGCATCCACCGATAGTCTTTAAAAGGATTAGTTGTTTTAGAAACTTTT
TTCCAAAGATTTTTCCAGTTAAAAATCAGTCATCAGGAGTACCCTGCCCG
CCAGTTGGCGACCGAAATTTTTTAATTCAAATTTCTCACTTACAGTTAGT
CACACTAGCGTCCCGCCAAAATGCGTATCAAAGATTAATGCTACGAAAGC
GCTATATCATTTACTTGACTCTCAAGCAAAAAAATGCGCCGCAAAACTTC
TAAAGGGATTCATGAAAAAATAACCCGGCGCTTTTTAATGAAATTAACAT
TTTCAAAAACTTTGAAAAATTGCCTAAAATTTGAGCCATAGATGAAAAAA
TTTGAGCCGAGGCAACCTTGAAAACTAATTTGAAGATCAACTTCCCAAGA
AAAAGATCTAGCTACGGGGGAGGCGGAACCCACCTAGATCCGCGCACCAC
CGGATAGGCTGTTTCCCGGAAATTTTGCCGGACCTCAAACAGTGACCCAT
TTACATGTGCGGAATTATTTTTACTTTAGTGTATAAACAAGGCCTTAAAA
ATCGAAGCGCTGTCTCGGGAATTGAATGACAAATTTTGGTTGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTGATTCAGGTAACTCTCATCCTTG
TTGTGCAAATACATCCTGTAGATGACTGATGTTGTTTTTTCTGAAAGCTA
GATTTCCTAGTGTGACTAACTGACTTACTTTTTACTTTTTTGAAAATCCT
TTTCGACCAACGGTTAGACAACTTTTAACATGCTCTTCCATAGCTGTCAA
CTCTCCCGCATTGGGCGGGAGACTCCCGCATGCCAACGCTTTCTCCCGCG
GGAAAAAAATTCTGCCAAATCTCCCGCATTTTCAGGATTNCTTTCTCCCG
CGGGAAAAAAATTCAGCCAAATCTCCCGCATTTTCAGGATTTTCTCCCGC
ATCTCCCGCATTTCCAAAAAGTTTCCGATTTCTTGAAAAATATTCAGAAT
TTGAAAGAGCGGAATGGCAAAATTTCCTGAATTTGGAAAATTGGGACGTA
AAATTTCCCGATTTCCCCCATTTCCGGAAAAAAAATTCTGATAAAATCGG
ATTTCGCAGGAAAATTACCTCGATTTCCTGATTTTCCAATTCGGAAAAAT
TGGATTATCGAGAAAATATTTCCGGCTTGGAGCTCTCCCGCATTTTTGCA
AGGCAAAGTTGACAGTTATGGCTCTTCGTGTTTGTTTTGATTTTTTATTT
GAGGCGATCTTCTTCTTAGAATAAAAAACTTTCGAAGCGAGCGGTACTAG
TGCCCAGTTCCCCACCGACGTACCAGTCTGCGACCGATCGCGAAAAAGAA
AAAATCAGTGCTCTACTTGCAGGTAAGGTCGTATTAATTGATCAGGATGA
TAAAAAAACTCGTAAGCTTTCCCGTATTACATTTATTTACACTCATTCTT
TTGTTTTAAAATAGCTCACTTACATTTCCCTTCGGCATGTTTTTTCAGAA
TTTTTCTTCAAGTCGCCATTTTTTTCTAAAGTTTGTTTTTGTTTTGTTTT
GAAAGTGGCGGTCCTTGGAGAGTCTTCATTTGATAAAAACGCGGGAATTT
TTTATGTCTGTTTTTTTCTCTTCGCGTCTGGAATGTTTTAAATCGCAATA
TAGAGTCTTCTTTTTCATTTTTTGAGTTTGGTCGGTCGCAGACTGGACGT
CAAATTTCTAAGCTGATTGCATCAACTTTTTTATCAATTCAGACGAAGGA
AACTGTATCGAGCTGATTTTTACAGAAATGCTTTCTAACATATTCATCGT
CTTGGACAAGTATTTTTTGGAGTGGGAGTTGAAGCGTTTTTTCTTACGAA
GCTTTTTTGTCCACAGGTAGCCATTCTTTATTTTTTTCGAAAAATCCGGG
TTTTTCATGTGCTTCCGTGCAAAGTTGGATCTTTCGGATTCTACTCGTTC
TTTTCTAGAACTTTTTTTACACAGTACGGGAAATAGATCAAGGCAGATTA
CTACCAAAAGAAATTCTCCAGAGGTTTGTTTTTGTATGACTTTTCTGGGT
TCAAAGACGTTCCGTCGCCAACTGGACCAGTCGCCAACTGGGCAGGGGAC
TCTCAGTAGTTTGCCAGTGCACGAACGGCCCCAGTGTACGAACAAGCGTC
TTTGAACTTGAAAAAAAACAACCAAAAACAAACTTCTATAGAACTTCCTT
TGTGCAGCAGAATCCTCAAACTATTCCTTGCAATCTCTCCAAAAATTAAA
ATAAACGGAGCACTAGAAACAACACCAAACCGATTTTGAACGAGGCCAAG
TAAAAAAATCACGAAATTCGGGATTTTTGTAGAGTCAGTTCACCAGTGCA
CGAACGGCCCCGGTGCACGAACGAGCGTCTTTGAACTTGAAAAAAACAAC
TAAAAACAAACAAACAAGAATTTCCTTTGTGCAGCAGAATCCTCAAACTA
TCCCTTGCAATCTCTCCAAAAATTACAGCTAAAGGTCGATTAGAATTCCT
ATAACTCAAGATCTTGTAGAACAAAATTTCACTGAAACATGTTAGCTCAT
TATTAATTCAAAAAATCAATAGAAAGATATCACCAGTATTTGATATAAAA
AAGGTTCCAGTCCGCGAACGATCCGAACACCATATTCAAAATGAAGACAT
TGCAACGTCAAAACATTCGAAAGCGCTGGTGATCTCAATGAAAGAAGAAG
ACACTACATTGCCGCGCTTTTCGATGAGCTAAACTTGAAAAGGAAAACAA
AAAAATGGACGACAAGAAAATATTTACAAAAATAAACAGGTTAGTAAAAC
ACTAAAGTTCTTATAAAAAAGACGCTTTTTAGTGAAAAAGCGCGTGGTTT
TGAAAAGTTCAAATACCCCTGTACTAGACGTTCGCGCTCGATAGGATCGA
TATGTGATCGATATGTGATTGATGGATTACTTAACGATCCGGATAGGAGA
TCGATGGAAGATTCAGCCATTAAAAAGTCTTGAGTGTCAATCCTTCGTTG
ATCCATTATCGAGCTAGTATTTCAATCGTGTATATCGATTCGTCATTGAT
CGTTAATCGATTTTTTATCGATTGTAAATCGAGTATGAGTCGATAGGGTC
GATAAGATCGCTAAAAGATTGATGATAGACTGATAGATAATCGATAACTA
ATCATAAGCTTAAAAAAATCTATGTTCAATATTACTGACCAGGTGGCTCG
CGAATTCCGCGAACTTATGAAGACTTTTTATTCTTTTGATGAAACTCGGT
CAGTAATATTGATGATTTGTTTACTTTTTTGATAAACCACAAGTAATTTA
CAGACCAAAAAGATCGGACCCTCGACGGATGCCAACCTGTACAAAGCGGC
GCAGGGGAAGCCCATACTTAAGACGCAAGTCGGCATTTAAAAAAAGCAAT
AACCAATTAGAAGCGAGGTTAGTAATGTTCACGACTACTCCTTCTAAGAG
CTGACAGTCCAAATTTCAAACTTATTTTTCATATTCAAAACCTATGCCAT
TTTAAAGCCCTTATCATCAGAGAAAAAATGAGGGGTCATTTACCTGGCAA
AAAGTTTTAGTTCTTGAGATACTGTTTATCAATTTGAAGTTCCAATTTTA
CAGCTCTTCGGTGTAAACAAGACTACCCAGCTAAATTCCACGATTTTTCA
GCACTCAGTTTCCATTTCACTCAATTAAATCTTGGGAAATTAGCGCGCGT
GCACGCAAAAAAACAAAAATTGGGGTTTTACTTTGCGCGGCCTTGAAAAT
CAGTCAATCAGCTTCAGACTTTTGTTTACTATAAATATAGAGGGGGTACC
CAGTCCAGTATGGATTTTGTGTAACTAACATCAAATATCTTCGCGCGTGC
ACGCAAAAAAACAAAAATTGGGGTTTTACTTTGCGCGGCCTTGAAAATCA
GTCAATCAGCTTCAGACTTTTGTTTACTATAAATATAGAGGGGGTACCCA
GTCCAGTATGGATTTTGTGTAACTAACATCAAATATCTTCGCGCGTGCAC
GCAAAAAAACAAAAATTGGGGTTTTACTTTGCGCGGCCTTGAAAATCAGT
CAATCAGCTTCAGACTTTTGTTTACTATAAATATAGAGGGGGTACCCAGT
CCAGTATGGATTTTGTGTAACTAACATCAAATATCTTCGGCGTACAACTG
AAACGTTTTTGGCGTAAGGGTACTTACAAAGATTGTTTGATTTTCAGTTG
GCGTAAAGTAATAATTCCAGCTCGGCGTGAATGACTCCATAATTCATCGA
TTTTTAGCTTTCATTTGGCTAAATTTGCTTTGAATTTGAAATTCGAAATT
TTTTGTGATGGAAGATAACAGGTTTTTAAAAGAGGAAAGTCAGTTTCAGA
ACTCTTCTTGCGCAAATTTTCTTATAAAAAACTTTTCTCTCGCAATCAGC
CATATTTACAAAAATCCCGAATTTCATGATTTTTTTACTTGGCCTCGTTC
AAAATCGGTTTGGTGTTGTTCTAGTGCTCCGTTTATTTTAATTTTTGGAG
AGATTGCAAGGAATAGTTTGAGGATGCACAAAGGAAGTTCTCTACAAGGT
TGTTTTTGGTTATTTTTTTCAAGTTCAAAGACGCTCATTCGTGCACTGAG
GCCGTCCGTGCACTGGTGACATGACTCTATACGAATGATGATGTGAAAAA
GATATCGAAAAAATTAAAATTAAATCCCCACCAAAAATCGCATTTTGGCC
AATCGCCAAATAAATCCACGCCAAAATTAATCCACTTTTAAGGTACAACC
TTGAAAGTTTAAAGGAAATCAGAAAAAAAAACTAAAATGTTTCTTTTGAC
CCGAATCCAGAGAAAAACCCTAGCAAAGCATTGGTATCATCCTGATCAAT
TTCTATGACCTAGCCCCTGCAAATAAAGCTATGAGCACTAATTTTCTCTT
TTAAGCAGTTGGTTGTAGTTTGGTACATCGTACCATGAGATCAGGTAACT
TGCATCAGTGGAGGCTAATATGCATAGCCCTCAAATGCAAAATGAATGAC
CTAGCTGGTCATTAAAATACAAAGTTAAATCAAAACAAAAATGGTAGAGT
AGAGCTGCGAGCGAAGCTGGGTAGCTCTTTTGTTTTGAAATTTTGCTGCT
TTGATTGGTCAGTACTGTGAGTGGTCCTAAATCTGACAACCCTGCCTAAA
TCATCCGACCCCACAAATGACTGCTATGATAAAAAATTCTATGTTTACAA
AGATTCCCTCTCCAAGTTGATTAATAAACTATATTGCAAGAACTCTTGAA
ACAAAACATCTAACAAGATGGACTAAAATGTCAAGATGTTAATTAATGTG
ATAAGAAAAGTTTGAGTTGTAAAAATAATTACTTCTATTATTCTGAATCC
GTTGCTCGTGTTTAAAACCTTTACAATTTTGTAATAAAAAAATATGTTTT
GTATAAGAAGCAATTAATGTTTTGGTTCAATTGGCTCAGTGTATCAAATC
TCTTAGCTTAGTTGACACTTTGGTATCTTCATTGCATCACAGTGAAAGGT
TTGTTTTTATTTTAGTTTGTATCTTTGAAAGACCCATTGGATTTAGGCAG
GGTTGTCGGATTTAGGACCACTCACGGTAATTTGATGGCTATGCAAGTTT
CCCTCCACTGATGCAAGTTACTCGACTTCATGGTACTGGGCACTAGTACC
ACTCACTTTGAAAGTTTTTTATTCTAAGAAGATCGCCTCAAACAAAAATC
AAAACAAACATGAAGAGCGTGCTCAAAGTTGTCTAAGTGTTGGTCAAAAA
GGGTTTTCAAAAAAGTTTAATGAAAGTGAGAAAGTTGAATTAAGAAAAAT
CGGTCCCCAAATGGTCAGGCTGTCAGAGGGCTTAAGCTCCGCTCCGCTAA
AAATGGCATTTTCGTGAATCACAACTTAAAAGTGAACAAATTTTCAAAAA
GAAATTCAAAAAATTCCATTTTAGGTTAGTTTGTAATAATTTAATAAAGA
TCTGGAAAGTTTGAAAAATGTTTAAGTAGAGCAGGTGTGCCCCCCCCCCC
AGTATTCGATCTTCCAGGTCTAGAGCAAATAGAAAATGGAATAGACTCCT
CTCCTCCAGTCTCTGCCAACATACAACGAGATGAATAAATTTACCTTACT
TACCTTTTCTTCTTCTTCTTCTTTATTTTTGCAGGGAGTTCATAACAGAA
AATGGGGCAAGGCACATCTTCAGAGACAGATGCTAAATTGAAAGCATTAG
TATCCAAGCTTAGCAAGCTGGAGATTAAAGATATTGAAGCAGTTTTCATG
TAAATCTACTCTTTTTAATTCTCTTTAGTATTACACTCTGATGGTAATTT
TTCTGAACGTACAATGATCTTTATCTTTATCAAACTAATGAACAAGACAG
TTTGAAAAAGAAGCAATGGGAAAAAAGTATTTTATCAGTGTCATAAAAAT
TGTCTTATACAAGCTTTCACAATAAAAAATTAGCTGTAGCTGAATTTTGA
TTCTTAATAGATTCTTCTTCACTCTTTCTCCTATAGGGAGTTATCTACTA
CTACTGATGAAGGACAGTTTGTTATCCAACAACCCTCATGGCTCAATCGT
GATAAATTTGCTGAAATATTTGGTTTAAATGATCTGATTGTGGAACAGTT
ATTTCAAACATTCGACCGTGACAAGGTTTACCCTCATCTTTTCATATTAG
TTCTTCATTGTGTACTATAGAAGAATTATTTATAAGCACTTGTATGTAGA
AGAAAATGCATTGATATGATCAGGCATAATGGTCTAACCAATGTCAATTA
ATTATCTACCTGGTCAGGAAACTCAACCAAAAAAGCTGAATTTCATTTTG
TTTTGGTCATGTGTGATCAACATCCATGTACAATCTGCAGTCGTTTTTCT
GGGGGACATCACATTTCCACTCCTCTGCAAGGACTTCCCAAATTTTATTT
ACTTCTCTCTGGGGCAGATTTTTATCATGTGATATTGATGAATAAAAAAA
TATCAGTCTCAAAATTCAAAACAGCCAGACTCACATGGTCTTGTTATTTG
AATTTTGAGATTGATATTTATTCTATTGACTATAATACTGATTTATCATG
TTCTAGAATGGTATTATTGATCTGCAAGAATTTGTTACTGGTATGGCATT
GTGTTTGCATGGTGGTATCAAAGAAAAATGTCACTTATTATTCAAGATTT
TCAATTTGGTATTTTTTTGATACGCTTATATCATTATCTAGAATTTAGGC
ACAAAAGTGTTTATGGAATCTATGTCTTTCGGTATTGACGAGGCTAACCT
TGATGTTTCCTTTCTTCATCTGTCATCTGTGTTTCTTATGTCTGATTTGA
TTTGGAAACTATATTTCTAAAGACAATATCAAAGAAAAAGAGAGTGATAC
TGTTTGCATTAGGTTTTGGTTTATGTATCAGCATAATGTGAAGTAGTCAT
ACTAACAAGTCTGTTTTTTTCCTCTACTTTATAGAATGGGGATGAAGGGA
TTAGCCGTGAAGAGTTATCGACAGTTTTAACCAGTTGTTTGATGTCAGCC
AATACCTTGCTTCAAAGCACATTGAAAACCGAAGGGCTGTCAGCATTTGA
GAGTCAGCTAGCTGATCAAACTGGTGCAGCTGTTATGCTTAATGTTGTGG
TCGATAAGTGAGTATTATTTTCTCATCCAATACACTAAAACTTACCACTA
AAAGTCCTATAAAGGTGGTTGGATTCGAATTTATCCACATAGCTAATAGA
CATGAATTACTCTTTATTTGATTTAATGCAAAGACAAAAAGAAGAACTTT
TTCTCCCCAATGTGTGTTTTACATTTTAGAATTGTGAAGGAAGCATTTGA
CACTTGTGATGTTTCTAACACTGGAAAGCTGGAAATTGATGTAAGAAAAC
ATTTTAACTCGCTGTATTTAATTTATTAGATTCTGCTAGATTCTGAATCA
ACTGACGATTTTATTTTTATTTTCATCAACTTCTCAGTAATGTTTTTTCT
CTCAGGAGTTTGCCAAATGGGTTCATAAAAATCCCAAATTGATGAACAAT
ATTTTTGTATTGCAATGTCCTAAGCCAACACCATCACCCATTAAAAGTAA
GAGTTTGTTTGTTTTTTAAACATAGGAATTTGATTTTTATTCCCCTTTTG
AAATATTGTTGAACAAGTCTTATCTTGCATCCTAAACTATTGAACTCTAA
CCAAAGTATTGTACAATAGAGAACTTTTGCAAGCTAATGATGGATGGGAA
GTTCAAAGAATTGAAGTTTTTGATACCAAGACTATTATTTTCGTTCAACC
TTGACATAACATGAATCGGGAAAGATCTCTTTACAATGTAAAGATATGTT
TTTTTCTTTTTAGGCTCAGAAAGTAGTTTTTCTGTTTTAACAATGGCTGG
CCAGGATGAAAACATCCCTGAGGAAAACTCCAAAACGAAGATTGAGATGG
CTAGATCAGGTAAAAAACATATTTTCATGTAAAAATGCCAAGTGAACAGT
TGTTAACTTTTGTTACCAGTTCAGCGAGTAACAAATCAAAACTATGATTC
ATAGCTTGCTGACTGCTGATTGCCAATTGTTAGACCAAGAAGTAAGGGCT
TTTTGCTGCATATTTTGACCTTTTTTTTCCATCTTCACAATCAAAACTGA
GTAAATTTTCCTTATTTTGTACGATGACACCCCCTTCTCACAGACCCGGT
AGGAATTTTTCAGCCAGTGGGTATAAAAATAACGGACTGAAACTCGATGG
GGATTGATATTCCCATATTGTTAAATATAGATTTTATGACTAAGGATTTC
ACTTCTTTTGTTTTCAAGGAAAAAATAGCATAGCATTTTGCAGTGAGGAT
TGGTTTATTTGATTATTTTCAGTGGGGACAAAAATTGGAGGATAATTTTC
CACCGGGGACGATATTTTGGACAATTTTTCCAGTGGGAAAACCTTGGTCC
CAGTGGGTCTGTGAGAAGGGGGTGTACGATGGTATGTACAAGTTTTCGCA
TCTTTATTATTTCCAGTTTCTCAAATAACAGAAGAGTCGACAAAATCATT
ACTAGAACTTAGCCAAGAAACCAACACACCGACAACTGCTGGTGATCTAT
TCAAAGAAACAAGCCAACCTTCTGCTGACGGTGCAGATTTTTTCGACACA
CTTGGTTCACATAATGAAACACCTTCTCAAGCACCAGCCGGTCAGTTACC
ACGTCCAGCTAGTGAATTATTCCTATCCTCAGGAAATGAAAACTCAAATA
TAGATGGTTTGCAGCACAGTACAAGCCATAATGATCTCGCTTCCTTGAAA
CAACAGCCCGCTATCAGCCATTTACAAAACGCAGAGAGTATGCAATCAAT
AGCTTTATCCAGAGACTCACTTGCACCGGATTCGCACAATGCATCACAAG
AGTTAGGAACCTCAACAGAAAATATCACCTCATTAGTTCCTCAACATCAT
ACTGAGCCAACAATACAACTTCACCAAGAAAACCAGCAACAAACACTGCC
CCAAGTTGATCCATCCTCATATCAACAACAACAACAAAGCCCCACCCAAG
CACAACAACAACCACCCATCCAACCGCCCCAGACCACCATGCAAACACAA
TACCAACAGCAACAAAAAACAGACCATTCACAAAGCTTTGATAACCCTGC
GCTAGCATTGGAGACAGAAGTCAACAATGAAGTGTTTCCAGAACAACCAG
CCGTTATTCAAAACACTATTTTGGACAATGTATGATAATTCTATTCATTC
CTTTTTTTTGGACCTACCCCGGTGGGGTGGAGGTCCTATAAATTAACCTG
TGTTCGTTCGTCCGTCCGTCCGTCCGTTTGTCTGTTACCAACTTTTCTCA
GGATTGAATCATAGGAATCTTTTGATTATTGGTACAAAGGTGCAAAATGG
TGGTGGCCAAAATGTGACGGAGCCTGATTTTCGAGAAAAAAAATTTTTGG
GTAAAATTTGGGCCAAAAAACGGCTAAAAAACGGTTTTTTTGGACTTTAT
GAAAAATTGGATCATTAATTTTTTCTGATTTTTTGCATGAAAGTAGGGTA
CCATCATAGGTAAAAGATGGCTCAAGCAGATTTTTGCAAAAAGATTTTGT
TTTTCTATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTCCA
ATTACTCAATTTTTTTATGAGATAGATGTTTTTTTTGCTCATAATGGCTT
ACTTTTGAAGAATATGTGTTTTTAGACATGAATTTTGGTTGCTTGGCGTG
TTTTTATAGAGAAACTGGATAAATTCGATATTTTTTTATAAGCACATTAT
CAATTACTTAGGTATTAGCTTTTCTCAAGATTGGCTCTTTCATTCCTAAT
GATTTTTTGCACAATGATGCATAACTATAAACCCTCGAATGTGACGGAGC
CCGATTTTCGAAAAACAATGTTTTTGGGCAAATTTGGGCCAAAAAAAAGC
TAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNATTTTCGAAAAATAATGTTTTTGGGCAAATTT
GGGCTAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAATATTG
GATCATTGTTTCTTTCAGATTATTTTGCATGAAAGTAGGTAAAAGATGGC
TCAAGCAGATTTTTGTGAAAAAAGAATTTTTCAACTCAAAAAAAACGCAT
CTTTATCTATAAGATAAGAATCACTATTAATAAGCATACATCAATGTTCT
TAGCCAAATCACTATTTGTGTTCTGAATGATTGTTTAGCGGTCATGCTCA
CATAGAGATATCAATTATATATGTGTGAAATGCATAACCAGGTAGGTCCA
TAAAAGTATCACTTGTTATATTTTGGCTCTACATTTTAACCTTGGCGGAT
AAGCTTTTCATTCAGAATAGTAATTTTAAATTCGCCACTGTAAACCCGCC
GGGGGGTATTCAAATAAAATGGGTGTCGTATATGCGAACAACAATAAAAC
ATCAAGTTAGTCTCTGACAGGCTCCTAAAAGTATGAAGTACAAAAAAATT
GACTTACCGTATTACTTCGGATCAACGCCCCCTTCTTTTAAACGCCCCCT
TCGAATGAACGCCTTCTCTAGGGGAGGGGCGTTTATTAGAAATTTGGGAC
TTTAATACTTCAGTACCAGCGTTGATTGGGTTTGAAAAGGAAGATTTTAG
TCATTTCTTGTAGCCAGAGCAGTTTTCGATGCAATTTTAGTCGTTGAAAC
AAAGAAATTTTGCACTAAAATCCTGATAAAGAACTAAAACAAAGGGTATA
CTTGCTCTAAATATTCGACTTTAGACTAAAATAATTCAATAAACGCCCCC
TTCTTTTAAACGCCCTCTCGAATAAACGCCCCTCCAAAAATCGAAAAAAT
TAAATAAACGCCCCGGACGTTTATTCGAAGTAATACGGTATTCAAAGGGT
CATTAAATCTCGTTATTCAAAAAAAATTCTGACTGAAGTTTGGAAAATAG
TCCCAGGGTTGTAAAAACGTACTACAAACCTGGTACCCTCCGGGCTTCAA
ACTAATTTTCACTTTTACTCCTAGAGCCAAGTATATAACGACAAATTAGT
GGACCCGGCACAAGAACAACGGCGTCGTGGATGTTCTTTTTGGCAACCGA
GCACTAACACTGAACGTCTTCTGCAACAATACAAACAAGGTGCTATCCCT
GAGATGAATGTTCTTACGTCTCCATCCGTCTTGGTTGAGAATCTCATGGT
ATGATCACTTACTCTCTTACAGTTTCTATTTCCAGAGTTTATTCACTGAG
AATTCAGCCTGATTTTAACCCCAACTTGGGTGATTTGGTTTCTTTGTAGT
TGAGTAAGAAGTAAGATGATAAGGAAAAATTACAATTGAGCCTGTCTTAA
TCCCAACTATCCATTACCATGCGTTAAAAAAACCTTGGAATTACAATTAG
ATACTGAAGTTGAGCATACAAGTGGGTTTTAGTACGTTAGTGTTTTTATA
GTACTGGCAACAGAAAATCAATGTGTTCTTTCTACCGCTTTCTTACAGGG
TGATCCAGTGAAAGACTTGGTACGAAAATATTTGGGTGAGCAAGAAGCCA
ACAAGAGACCAACACTGATGGCCAATCAAGTGGAGATGAATGAAAATGGA
TTGAGAAGATTATTGGTAAGTTTCTTAGGTTTGTTTTGTAACAGTAGGGC
TGTGCTCTTCCTCGCGATAGAATTATTTTCTACTTTATTTATAAAGGAGA
TTTCGAATTAAAGAAAGAGCATATGAATTATATCAGTACGATTGAAATTA
AAAGTTATACCTCGAGAGTTAAGTTATGAGTTACACCTAAACTTTTTTAA
GTTTTACCTCGTAAACTTTCTGAGGCTTTTGGAGCAGATGGGAACTTTCT
TTCGGAAAAATCTTTCTTTCTTGTCTTTACAGGCTGCAGGATGTTGGAGA
GCGGCAGTGGACTTTACCACTAAATATCTGACAGCGCACGGCCAAGGGCT
TGTCTCCATGGGACAAAACCAAAGATCCAATTTGAGCCCTTCCATTTTAC
AGGTAAAGTGCCTTTTAATAGCATACCGCAGTGATTTTAAAAATAGACAT
CAAAATTACTGTTTGTCCGAGTTTTTAATCCCATCATCTTTTGCATTAAT
TGCTTTTGCAAGTCAATTAAACTTATTGACAATACAAAAGTAATAACTTG
CACGCATTACGAATCAAGATGAAAAGAATTGTGCGATTGAATTTCTGTCA
AATGTTAAAAGTAATAATTATGACGTTTGCATAGCAGTGTGCTATTGAAA
CTATGGCATCAAACTCCTTATTTGGCACCTTATGAAACTGTTATGCACAA
AATGAATTACTTTTTGCTAAAGTTCAGACCGTTTCTTTTTAGATTTGGTT
CGTACGAATCGCTCTACTGGTCAAGTTGAGAATGTTCAGTAGTGCAGAAG
CAGAGTTGAGCGCCTTCAAAGAATTTGACGCCCCAGATCTTTATTATCAA
TATTACCCTGAATTATATCAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043843XLOC_043843Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070401-exon-scaffold_55-1575043694:165269..165318TCONS_00070401-exon-scaffold_55-1575043694:165269..165318Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1575043694:158820..158934TCONS_00070401-exon-scaffold_55-1575043694:158820..158934Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1575043694:158444..158582TCONS_00070401-exon-scaffold_55-1575043694:158444..158582Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1575043694:157911..158012TCONS_00070401-exon-scaffold_55-1575043694:157911..158012Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1575043694:157462..157634TCONS_00070401-exon-scaffold_55-1575043694:157462..157634Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1575043694:157229..157289TCONS_00070401-exon-scaffold_55-1575043694:157229..157289Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1575043694:157023..157113TCONS_00070401-exon-scaffold_55-1575043694:157023..157113Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1575043694:156660..156755TCONS_00070401-exon-scaffold_55-1575043694:156660..156755Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1575043694:155390..156102TCONS_00070401-exon-scaffold_55-1575043694:155390..156102Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1575043694:153371..153544TCONS_00070401-exon-scaffold_55-1575043694:153371..153544Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1575043694:152954..153070TCONS_00070401-exon-scaffold_55-1575043694:152954..153070Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1575043694:152567..152686TCONS_00070401-exon-scaffold_55-1575043694:152567..152686Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1575043694:152096..152226TCONS_00070401-exon-scaffold_55-1575043694:152096..152226Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1510915933:165269..165318TCONS_00070401-exon-scaffold_55-1510915933:165269..165318Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1510915933:158820..158934TCONS_00070401-exon-scaffold_55-1510915933:158820..158934Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1510915933:158444..158582TCONS_00070401-exon-scaffold_55-1510915933:158444..158582Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1510915933:157911..158012TCONS_00070401-exon-scaffold_55-1510915933:157911..158012Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1510915933:157462..157634TCONS_00070401-exon-scaffold_55-1510915933:157462..157634Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1510915933:157229..157289TCONS_00070401-exon-scaffold_55-1510915933:157229..157289Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1510915933:157023..157113TCONS_00070401-exon-scaffold_55-1510915933:157023..157113Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1510915933:156660..156755TCONS_00070401-exon-scaffold_55-1510915933:156660..156755Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1510915933:155390..156102TCONS_00070401-exon-scaffold_55-1510915933:155390..156102Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1510915933:153371..153544TCONS_00070401-exon-scaffold_55-1510915933:153371..153544Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1510915933:152954..153070TCONS_00070401-exon-scaffold_55-1510915933:152954..153070Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1510915933:152567..152686TCONS_00070401-exon-scaffold_55-1510915933:152567..152686Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1510915933:152096..152226TCONS_00070401-exon-scaffold_55-1510915933:152096..152226Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1491911889:165269..165318TCONS_00070401-exon-scaffold_55-1491911889:165269..165318Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1491911889:158820..158934TCONS_00070401-exon-scaffold_55-1491911889:158820..158934Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1491911889:158444..158582TCONS_00070401-exon-scaffold_55-1491911889:158444..158582Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1491911889:157911..158012TCONS_00070401-exon-scaffold_55-1491911889:157911..158012Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1491911889:157462..157634TCONS_00070401-exon-scaffold_55-1491911889:157462..157634Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1491911889:157229..157289TCONS_00070401-exon-scaffold_55-1491911889:157229..157289Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1491911889:157023..157113TCONS_00070401-exon-scaffold_55-1491911889:157023..157113Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1491911889:156660..156755TCONS_00070401-exon-scaffold_55-1491911889:156660..156755Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1491911889:155390..156102TCONS_00070401-exon-scaffold_55-1491911889:155390..156102Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1491911889:153371..153544TCONS_00070401-exon-scaffold_55-1491911889:153371..153544Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1491911889:152954..153070TCONS_00070401-exon-scaffold_55-1491911889:152954..153070Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1491911889:152567..152686TCONS_00070401-exon-scaffold_55-1491911889:152567..152686Clytia hemisphaericaexon
TCONS_00070401-exon-scaffold_55-1491911889:152096..152226TCONS_00070401-exon-scaffold_55-1491911889:152096..152226Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_55supercontigscaffold_55:152096..165318 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00123612	0.0155923	0.00121101	0	2.9402e-05	0	1.32175e-06	2.7666e-09	1.30348	1.4803	2.81667	0.0169788	2.60881	6.46217	5.82901	3.90871	5.10757	2.04197	1.06893	3.66644	0.83891	0.96608	2.23135	4.89885	1.43667e-07	0	1.80499e-05	0.000688385	0.184229	0.174104
Blast
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BLAST of TCONS_00070401 vs. Swiss-Prot (Human)
Match: TPC12 (Trafficking protein particle complex subunit 12 OS=Homo sapiens GN=TRAPPC12 PE=1 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 7.254e-32
Identity = 69/161 (42.86%), Postives = 96/161 (59.63%), Query Frame = 2 
Query: 1607 WQPSTNTERLLQ----QYKQGAIPEMNVLTSPSVLVENLMGDPVKDLVRKYLGEQEANKRPTLMANQVEMNENGLRRLLAAGCWRAAVDFTTKYLTAHGQGLVSMGQNQRSNLSPSILQIWFVRIALLVKLRMFSSAEAELSAFKEFDAPDLYYQYYPELY 2077
            W P   T  +L+    Q +     +   LT P +  +N+ GD VKDL+ ++LGE+ A KR  L A+ VE +  GL++L++   WRAAVD   + LTAHGQG    G    ++ +   LQ+WFVR+ALLVKL +F +AE E   F   D PDLYY+YYP +Y
Sbjct:  310 WLPGEATRGVLRAVATQQRGAVFVDKENLTMPGLRFDNIQGDAVKDLMLRFLGEKAAAKRQVLNADSVEQSFVGLKQLISCRNWRAAVDLCGRLLTAHGQGYGKSG--LLTSHTTDSLQLWFVRLALLVKLGLFQNAEMEFEPFGNLDQPDLYYEYYPHVY 468
The following BLAST results are available for this feature:
BLAST of TCONS_00070401 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TPC127.254e-3242.86Trafficking protein particle complex subunit 12 OS... [more]
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