TCONS_00070376 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070376
Unique NameTCONS_00070376
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length848

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070376 ID=TCONS_00070376|Name=TCONS_00070376|organism=Clytia hemisphaerica|type=transcript|length=848bp
ATACAAATCCATGGTTGAGATACGGAAACTGAGGGCACAAATCACCAATG
CTGTAACATCAGTTTGTGGTGAAGGAAACTTATACATGGATCCAAAAATG
CAACCCCCCGATCACAAACAGTCTGAGGTGATACGGAAAATTGTGTTATC
ATGCGTCGGTGACCATGTTGCAAGGAAAATACCACGCGAAGAAGCCAAAG
AAAAGAAACTGAGGAACGCTTATATGTGTTGTCTATCGGAAGATCCCGTC
TACATTCATCCAACCTCCTCTCTGTTCACCAAACTTCCTGAGTACATTGT
CTTTCATGAAATCATCGAGACAAGCAAGTGTTATATGAGATGTTGTTTTG
AAATCGAAGAAGAATGGCTTCCAAGCTATGCGCCTTATATGTGTACGCTT
GGTAAACCTGCTGAAGAACCTGCTCCGTGCATCAAAGAAGGAAGGGTGTT
TTGCCACAGGTCTTGTAACTTTGGTCCCCACGTATGGACTTTACCAGCGT
GCTACGTGGACAGCTCTGATTGGCCACAACGATTCAGATGGTTTGGTCGC
TTCTTTTTAGAGGGACTGGTTATTACTGAACTTGAGAAAAACGCGTCTCT
CTTTCTGACACCGCCTGCTGTTATGGTCAAAAGTTGGTCCCATTTACAAC
CAAAGTCCGAGAGATTGTTGAAAGCTTTGATCGACAAGGACATGGATAGC
GAAGAAAAGCTTCGAAAAGCCTGGAAAAAAGACTCCAAATGTAAGTAAAG
AACGTAAAAGAATCATGGctttcatttttcataaaacatCTTAAAAAGAC
AAATTCTTTGGCAAGTTTGAAAACCGGGGATCCAAGGCTAGTGCGAGA
Run BLAST on NCBI

transcript from alignment at scaffold_55:317921..329863+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070376 ID=TCONS_00070376|Name=TCONS_00070376|organism=Clytia hemisphaerica|type=transcript|length=11943bp|location=Sequence derived from alignment at scaffold_55:317921..329863+ (Clytia hemisphaerica)
ATACAAATCCATGGTTGAGATACGGAAACTGAGGGCACAAATCACCAATG
CTGGTGAGTGGTTTGCTTTAATGAaggctacacgctttttttataagaat
attttttataagaatatcagggtgaaaattgaacaaattgtaagaatacc
ctaagaataccctctagggtgaatttcacagaatttgataagaatacggt
cattttgtatttggttaacagaaaaaaactgctttctatgttagagataa
attgaagcttttgGGAAGAAATGTAGTTTTAACcaatgttcactcaaaag
tccaaaactctcaaattgatcatttcttatttttgtaaaaaagtcaagtc
taaaaaagtaagaatacgttaagaatatttcaccctcaattttggcactt
tcttaagaatacttgatcctcaaccaaagtacattattcttataaaaaag
cgtgtacattaAAGATATAATTTTTAAGATGTAGAAAAGAGGCGCGACGG
CGTATCTACGCTGGCAAAgcagaataaacaaaataatttacttCTATCCG
CATACATGTGTTTTGTCCTTCCCAGAACTCAGCAGTGCGCCAAGCGTAAG
CGAGCATATACAgctgttgtcaccagagtgctAAGCAAAATAACTTACCA
AAATTTGTGCTCGTGTGGCACTGGAGGGGAGAAAGCAgctctttcttttg
tttaaaaatgctgtgtaaggaAATTGTAGATACGTTAAATTATGTCATTT
AATATACCTGTCGACCCAATGCTCAGACCTACACGATAAGGTACTACTTT
CAATTTTACTATGGAGTAGAGGTGTGCAAGGTTGTGCGTTAAATCCCCGG
CCGGATACAAAATTGAAACttaatgctcagcaattaagagaaggacaAAA
ATTAAGTGGAGCAATACAGTGAGAAAGATTGGCGCTCTATCCTACATTTG
GGATAGTTATCGAAGGAACAGACTTACTACTTACAGACTCTGTCGTTTCT
AGAATTGCATTTTTTCAGGGAAAGAGAAATCATAAAAGAGAGAATTTCTC
AGAATCTTTATTAAAATGTGAGTGCTGATGGATGGATTTTGCTATATAAA
GATAAATTTCCGATTTACAGTAACATCAGTTTGTGGTGAAGGAAACTTAT
ACATGGATCCAAAAATGCAACCCCCCGATCACAAACAGGTTTGCCAATgt
caatgggccattccattctatattcatacagggggtggacgaaaaTTTAA
TAGTAATACTCATTTTTGTTGGTCCAACCATACTTTTAAcgtatgaaaat
aatttttccaagactgcttttgcaaattttgccattttcaagGGCGTATC
ACcacatttctaaaaatctttttttgccttaaaaaggttcgtccaccacc
cccctgtatggaaatttaatggaacagcccaatcaTAGTTTACTTACCTA
TTTTAAATAAATGCTGGTCTTTAGCGACGTATTGACTTTAAATATCCAGT
TAAATATCGACCAAAATTTCGACTGAATGCGAGTCGATATATGTCAAGAG
ACATTATAGGCCTTGGGCAGTTtcacttttttcaggttttctctTATCAA
GCTTTTGTAATTGATCGTTATCAATTCCTCGAGGGtactgatttgaaatt
taactGTATGAAAATCCGCAGTTTTTTGTATTGCTAGGTATAACAGAATT
CATGATTGTTTTTGGGTCTTCAAAATTAAAACGTGTTATAGCTTTGAGAT
AGCAAAAATGTCTCACAAATATTTACTACAGTTTTCTAGAATCCGTTTTT
TTATCACCGACGTCACCTTTGCTTTTTGATCGTGTGATTGGAATGaggat
tttatcttattttatcTTTCAGTCTGAGGTGATACGGAAAATTGTGTTAT
CATGCGTCGGTGACCATGTTGCAAGGTAAGTCATTGTTAATTTAAgcgaa
aattaaaggttttatttttacataagtgttcccgtctCTCACTTACTTCT
TCTTTAGCTCGTGTTCGCAGGTGCCAACATTGAGTGGTTAGGGCGAAGGC
TAACCAtatccttctttttctttttcttcaagacCTTTTTGTAGAACTCG
TCTGCTGACCGACCATCAAGCACGTCTTCGAGTGTTTTGATTGNgttccc
cccccccccccccccccctgtatggatttttAATGTAACAGCCCAATCAT
AGTTTACTTACCTATTTTAAATAAATGCTGGTCTTTAGCGACGTATTGGC
TTTACATATTACAGTTAAATATCGACCAAAATTTCGACTGAATGAGTCGA
TATATGTCAAGAGACATTATGGGCCTTGGgcaatttcacttttttcaggt
tttctctTATCAAGTTTTTGTAATTGATCGTTATCAATTCCTCGAGGGta
ctgatttgaaatttaactGTATGAAAATCCGCAGTTTTTTGTATTGCTAG
GTATAACAGAATTCATGATTGTTTTTGGGTCTTCAAAATTAAAACGTGTT
ATAGCTTTGAGATAGCAAAAATGTCTCACAAATATTTACTACAGTTTTCT
AGAATCCGTTTTTTTTATCACCGACGTCACCTTTGCTTTTTGATCGTGTG
ATTGGAATGaggattttatcttattttatcTTTCAGTCTGAGGTGATACG
GAAAATTGTGTTATCATGCGTCGGTGACCATGTTGCAAGGTAAGTCATTG
TTAATTTAAgcgaaaattaaaggttttatttttacataagtgttcccgtc
tCTCACTTACTTCTTCTTTAGCTCGTGTTCGCAGGTGCCAACATTGAGTG
GTTAGGGCGAAGGCTAACCAtatccttctttttctttttcttcaagacCT
TTTTGTAGAACTCGTCTGCTGACCGACCATCAAGCACGTGATCTTCGAGT
GTTTTGATTGGTCGGCCTCTCTTCTTGTTAATGTTGTCGTTGAAAAGCAG
TCTTTTGACGATGCTGGTGTTCTTTTGTCTTGCAATATGGCCAAGATAGT
TTTGCTGATGTCATTTTAAGTATTGAAGGATGTCTTCAGTCTTACAGACG
TGTAAAACATCTTCACTTGACATTTGTTCATTGTTTTCATCGATTCTTCT
TTCAAGACCGCCTCTTACCTTCTTACGAAGCATATTAATGTAGATGGATC
GGATtcgctgttgttgttgttgttgagtgaTATTCCACGTTTGACAGGAA
TATGTCTACCGGCTGCGCACcatcactttttctattgtttaagtgacgta
ttgggtggaaaattttaatacTTGGTTCATATCATGAATACCCTTGTTTT
CAGGAATATCTTTCGATTGTGTAGTTTTTTACTCATTTAATTGTACTTGT
TTTGAGCAACAACAATTCTTAGGTCAATAGTCGGTATTAATTAGTATTTA
ATTATAACTATGTCAGACCAACGTTaaataaattggaaaaaaaaaaataa
aaaatctctgCATCTCCTGTTGAAAGTTGATTGAAGTGCATGTCTTCTTA
GGACAGTGTTTGCTTATTGTtttattgtgctgatataagcaaaacaatgt
ttttcttttcctctttcttaccaatcttgctccacatctgtgccAATTCA
ATATATCAataagcttgtaaattaaattgatgagtaagcaaacgatatca
ctcttatttaagaACAAAACCTTTTAATCTTAATCTGCTTTTTATCAGGA
TATACTTCCAAAAGTGGGTCAGTAAATCAAAAGTTTTCAGTTGATCGTCA
GCATTACAAATCAGGAAATCTCGATGACGAGagtttgaaaacaaaagtta
tgtcTCAGCGCAAAAAAAACCATTTAAATGATGCATATTTAAATCCTTGA
AATTCGGGGAGGCTGTCGAAGATTTGTTTCAACAGTCATCGGTTCATGTT
CTCGGCTCTGTTCTCGCAAAAgtatttgataaaatatattttgcctttca
aaattttaatgtaCCTGTAGTAAAATGTTCGCTCCTCTAGTTATGGGGCA
AGTTGAAGTGGAGTTCTTCTGGAATTTATATTTTAGATCTGTTTTATTTG
CACTGGTACAGTATTTTGATTTAATCAACAGAACTAGAAATATTAAAACA
TAAACAATTTATGtcaaataatataaaatttgaactaCTTATACCGCTTA
AAAATAATCCTGAAGTtgaattaaaacatttttcagattttcaaaatttt
taagaacGACATGCTGCCAATCTTCCGTCTTTGGCCGTCCTTCGCTTAAA
GATGACGTGTCCTCCTTGTAGAATGCTGTTGCTGTGCAAGATACAGTTGG
ACCACATAAGATCCCACATCTAATTGTGGAAATGTGAACAAGTGTGGACC
TTGCCCAGGCGTTGGTGGAGGTAGTTTAACCCATACGCTAATTGAACCTT
CGACCTGCAGCTTAATATTACTAAAAAAGCTCTCAATGCGCAAACTGTGT
TGTCTTGTAAGACTCGCAAATACTTAATTCTTTCGTGGTTTCATTAATTT
ATGAACATTAATTTGTTTTTTAGATTTGATCGAATTTTCTCCACCATTTT
CATTTATTGTTGATATGTAATTTTGAATCGATACCACTGGAATGCATGAT
ATGAAAGCAATCACAAATTCCACAATCTAGTATTCAAAACTGCTTTGCTC
TCAATCAAAATTacattcattttgaaatttctttaacaATCTCTTATCAA
CGTAACTTTACCATTCGACATTTTATTATTCGATAAACTCCTATTCCGGA
GAAATAGTAAAAGTCCCTTCCTTGACAAGGGACACATTTCCGTtcactct
cgggtacctaatagggCTCATCACTCATCTTTATGAAATCATCTGAAATT
Atatcatctttttaaaatgttgagtttagcgattttagctgggttttacg
tcatatttcaaaataaagactTGATCTGGACGTCCTATGACCTTAAAAAT
TGGAATAAGCACCCTTGATAAGATTAAGAAGTCAGAAATTTCCAAATTGT
TTCACCAGCGTGGTAGACTTTACCCCCGCTTCACTTGTTCTTGCTTGAGG
AAGGTTGAAGTTTCCTTGCTTTAAACTCGATGATTCACTGTCTCACTGat
tcacacaattttttttttttgcgttcaAGTAAATTTGAAATTCGATTCCT
TAAAGCAGGCAAAGATGGAAGAATCCTTCCCATAAACTTACCCAGCTTTA
gcttgcacacaacgttgtttcaacgttcatctaacgtcatatggacgtta
tgaacgttaaataaacgttaaaacaacgctgTGTTCCAGCTGGGTAATCT
AAGGATACACCGGTATCTTTCTCGATAGCTGTGATAGTTTTAAACACTCG
GATGGACTTAAATTAACGAGGAACCTGAATCCACCTGAGTTGATCAAGTG
AAATGAAGGGGAAATTTCTTGAAACATAAAGGTTCGCTACCTGTGAAAAA
CAAAGACAGCTAACGAATTTATTTTCCAACAAAAtaactcaggtaagtta
tggtaTGTCTCAAAAATGaacatttaaataatttttgaagacCATTAGCC
GGCAAAAATTTNCTTGCCCAGGCGTTGGTGGAGGTAGTTTAACCCATACG
CTAATTGAACCTTCGACCTGCAGCTTAATATTACTAAAAAAGCTCTCAAT
GCGCAAACTGTGTTGTCTTGTAAGACTCGCAAATACTTAATTCTTTCGTG
GTTTCATTAATTTATGAACATTAATTTGTTTTTTAGATTTGATCGAATTT
TCTCCACCATTTTCATTTATTGTTGATATGTAATTTTGAATCGATACCAC
TGGAATGCATGATATGAAAGCAATCACAAATTCCACAATCTAGTATTCAA
AACTGCTTTGCTCTCAATCAAAATTacattcattttgaaatttctttaac
aATCTCTTATCAACGTAACTTTACCATTCGACATTTTATTATTCGATAAA
CTCCTATTCCGGAGAAATAGTAAAAGTCCCTTCCTTGACAAGGGACACAT
TTCCGTtcactctcgggtacctaataagtgGCCCACTCATCTTTATGAAA
TTATCTGAAATTAtatcatctttttaaaatgttgagtttagcgattttag
ctgggttttatgtcatatttcaaaataaagactTGATCTGGACGTCCTAT
GACCTTAAAAATTGGAATAAGCACCCTTGATAAGATTAAGAAGTCAGAAA
TTTCCGAATTGTTTCACCAGCGTGGTAGACTTTACCCctgcttcactttt
tcttgcttgaggaAGGTTGAAGTTTCCTTGCTTTAAACTCGATGATTCAC
TGTCTCACTGattcacacaatttttttttttgcgttcaAGTAAATTTGAA
ATTCGATTCCTTAAAGCAGGCAAAGATGGAAGAATCCTTCCCATAAACTT
ACCCAGCTTTAgcttgcacacaacgttgtttcaacgttcatctaacgtca
tatggacgttatgaacgttaaataaacgttaaaacaacgctgTGTTCCAG
CTGGGTAATCTAAGGATACACCGGTATCTTTCTCGATAGCTGTGATAGTT
TTAAACACTCGGATGGACTTAAATTAACGAGGAACCTGAATCCACCTGAG
TTGATCAAGTGAAATGAAGGGGAAATTTCTTGAAACATAAAGGTTCGCTA
CCTGTGAAAAACAAAGACAGCTAACGAATTTATTTTCCAACAAAAtaact
caggtaagttatggtaTGTCTCAAAAATGaacatttaaataatttttgaa
gacCATTAGCCGGCAAAAATTTGTAAACCAATGATTTACTACCATgaaaa
cttcatcatggtatcCTTCGTAGTTTgtaattttggtaattttggtaatt
tttggtAATAATGGTAATcttcaggtttttgagacatgccataacttacc
tgagaaGGATGTTTTGCTGCGTAACAAGTGCCTTTAAAACAACTTTTCTC
ACCTCTTTTTAGGAAAATACCACGCGAAGAAGCCAAAGAAAAGAAACTGA
GGAACGCTTATATGGTATGATGCTTGTGGTtagcttacacgtttttttaa
taagaacatccaaaatttttgaagccgttttaagccttaaaatgttctta
acatattcttattttcgccattttttagtatttttgcccattttcctatg
aaatttgATGTCCTacagtctgcaaagccttaaaatgttcttaacttgct
cttgaTATTTCGGccttcgaagccttatgtttttataaaaaaaacgtgta
gtttgtAGGTCAGCTCTCGCATGGCTGATTATTCTATATGGTGACGAAAA
CTTTAAAACTGACTTTTAGTTggaagaaaagagaaaagattACAAACCAC
ATATCGAAAACCGTTATATAATGTCCTGCTCTAAactatacgttttttat
aagaacacgtgGCCCATTTTTGAACAGATTTAAAGGAAACTATGAGCAAT
CAGAATGcttgaaatttcagaaaaaactcTAGACATTGCAAAAAACTGCT
GACTTTACGCCCTCAATCAACTAAAATTTACTTGtcccatggcgttctaa
attaaattattaaataaTGCCATGACTTGTCCTCATAACAAAGCTTGCta
tcctttttctttttattctcaTTTCATTTCAACATTCTAGTGTTGTCTAT
CGGAAGATCCCGTCTACATTCATCCAACCTCCTCTCTGTTCACCAAACTT
CCTGAGTACATTGTCTTTCATGAAATCATCGAGACAAGCAAGTGTTATAT
GAGATGTAAGTTTCAACATTCAGTTTGTCGACTTCACAGCTTTCGCAAAT
GGTGAAAACGAGTTGATTTACCCGAATGggtttgatttttaaatttaaag
aaaaaacaacaatgttttattttattaaaattgagcaaaagcttTTTGAT
TAAAGATCATGATGATCTTTAAATTAACTTTTGGAgtggcaaaatttcaa
atgaaaaaatttgatttctcGTTCCTTGTTTTTGAACTGTAACGTGCtaa
agcactgggctcaacttcagtatacgtgtgaaagtgaaaggcccaattgt
aaacactttttttaaaagggcAATGGGTACTAGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaaaaaaatttga
ttttttgttccTTGTTTTTGAATACGCGAGATAAAGTTGATCAATTATAC
GACAAGCAAATTCTTTGTTCCATTGCTTGTCTTCACTTTgttgctttaaa
atttgaatttcaaacACCATAGTAGACGTTTCCATttatttttcaactat
ttttattaaaaatgagGCTTTGGGAAAAGTTCAAATAAcgaattaagaac
aatcctagTCTCAGGTTTCGAAGAAAATACTGATTTTAAACCTCTCCTTG
CCTTTAGTGGTCAGAATATGTAGATATTCTTTCGTAAAAGGACTGGTTAC
CGGTCCTCCACCTCACTAGCTGGCTATAGCTCAGAACCATTTATTTTCGC
CGAAAATGTCTTCGTTGTTTTAGAAATCTGAGACCGAGAGCTTTGCATCG
GTgccaaaacttttttcttaaacCCATTTTTAGAGCCACAATTTCCATTC
GAAGTtggatttttaaaacaaaagattacaaaaaaagggcgtggtcacaa
GCTCCACAAAATAAGCATATCAAGAAAGTTTAAGATAATTTAAACccaaa
aatcgcgaaaaagTCAGAACAACCAAGCGGTAATATACTGGCtgactggt
tcttataaaaaatcatgtATATTACGCTTTTGAAAAACGTCAATTTACGG
TCAATCGTTGTCTAGCTCTAGAGAGTCGTGATACATGCCCTCTTAAATAC
CTTTTTACAATATTACTTTATTCTCAAAAAGCTCGGTTTATCTTTTCACT
CCCACTCATAGGTTGTTTTGAAATCGAAGAAGAATGGCTTCCAAGCTATG
CGCCTTATATGTGTACGCTTGGTAAACCTGCTGAAGAACCTGCTCCGTGC
ATCAAAGAAGGAAGGGTGTTTTGCCACAGGTCTTGTAACTTTGGTAAGTG
ATATGTTATCACTTTAACCGTGTTGGCAATGGAAAGCTTGACTTATTATT
TAGTATTTAGTTATTTGGGGTTTTCAGATCGAGGGTCCTGGAGTCGTAGA
CATAGAGTCCTTCTCCTGATCTATTTTTAAGTGATATAGTCTCAAAAGTG
TACTGCAAGAAAAATTAGTTTGTAGCCTTTCTAGGGATCCGCTTATTCAA
cttggctgtttttttttttgcaaaaatattcaaataataatgcttatcgg
cgatccaaaaaatatctgcaatctgattggttaaaaagagtacaatatat
cttgtattttacatgtaaaaatataaattgacgaaaagatgttgttgNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNattttcctcgcctaaaggctcggaaaatattgtacgg
aaaaatcgcggaactcgtaaaatatttctcatattgtactcgcaaatgtc
cgataactattacttaaaataaaatataaaccGGTGGCAAAATACCCGTC
AAAGAACCCGTCAAAGAACCCGTCGAAGAACCCGTCAAAGAACCTCATGA
AATCGCTAATcacttttttctaattcttttGCTTCTTCAGGTCCCCACGT
ATGGACTTTACCAGCGTGCTACGTGGACAGCTCTGATTGGCCACAACGAT
TCAGATGGTTTGGTCGCTTCTTTTTAGAGGGACTGGTTATTACTGAACTT
GAGAAAAACGCGTCTCTCTTTCTGACACCGCCTGCTGTTATGGTCAAAAG
TTGGTCCCAGTAAGTTGCAGCCACattaacttttaatttttcatcgcTTG
ACTTCTATaatacataaaaaattttcagactcaaaattttgatgCAACTT
ACATGTACAACTAATGCCGCACTGTTCCCATTCCTGATGTTTCATTTGTC
ATCTAAAGAAAGTCTCTCATTATATAGTATAATAACTTTACCACTCGAAA
GCTCTCAAATAATCCAACCATTATGTTAGTTAAAGACCAAATTGCAGACC
AAATAGATAGTTTACAAGATCTGCTTTCAGTTGCAGGTTACAGTGAAAcg
gctttttttattttttataattatttgCTTACTTAAGTTTACAACCAAAG
TCCGAGAGATTGTTGAAAGCTTTGATCGACAAGGACATGGATAGCGAAGA
AAAGCTTCGAAAAGCCTGGAAAAAAGACTCCAAATGTAAGTAAAGAACGT
AAAAGAATCATGGctttcatttttcataaaacatCTTAAAAAGACAAATT
CTTTGGCAAGTTTGAAAACCGGGGATCCAAGGCTAGTGCGAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043834XLOC_043834Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070376-exon-scaffold_55-1491911889:317921..317973TCONS_00070376-exon-scaffold_55-1491911889:317921..317973Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1510915933:317921..317973TCONS_00070376-exon-scaffold_55-1510915933:317921..317973Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1575043694:317921..317973TCONS_00070376-exon-scaffold_55-1575043694:317921..317973Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1491911889:319041..319108TCONS_00070376-exon-scaffold_55-1491911889:319041..319108Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1510915933:319041..319108TCONS_00070376-exon-scaffold_55-1510915933:319041..319108Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1575043694:319041..319108TCONS_00070376-exon-scaffold_55-1575043694:319041..319108Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1491911889:320557..320609TCONS_00070376-exon-scaffold_55-1491911889:320557..320609Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1510915933:320557..320609TCONS_00070376-exon-scaffold_55-1510915933:320557..320609Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1575043694:320557..320609TCONS_00070376-exon-scaffold_55-1575043694:320557..320609Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1491911889:324883..324934TCONS_00070376-exon-scaffold_55-1491911889:324883..324934Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1510915933:324883..324934TCONS_00070376-exon-scaffold_55-1510915933:324883..324934Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1575043694:324883..324934TCONS_00070376-exon-scaffold_55-1575043694:324883..324934Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1491911889:325561..325675TCONS_00070376-exon-scaffold_55-1491911889:325561..325675Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1510915933:325561..325675TCONS_00070376-exon-scaffold_55-1510915933:325561..325675Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1575043694:325561..325675TCONS_00070376-exon-scaffold_55-1575043694:325561..325675Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1491911889:328182..328313TCONS_00070376-exon-scaffold_55-1491911889:328182..328313Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1510915933:328182..328313TCONS_00070376-exon-scaffold_55-1510915933:328182..328313Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1575043694:328182..328313TCONS_00070376-exon-scaffold_55-1575043694:328182..328313Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1491911889:329161..329329TCONS_00070376-exon-scaffold_55-1491911889:329161..329329Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1510915933:329161..329329TCONS_00070376-exon-scaffold_55-1510915933:329161..329329Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1575043694:329161..329329TCONS_00070376-exon-scaffold_55-1575043694:329161..329329Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1491911889:329658..329863TCONS_00070376-exon-scaffold_55-1491911889:329658..329863Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1510915933:329658..329863TCONS_00070376-exon-scaffold_55-1510915933:329658..329863Clytia hemisphaericaexon
TCONS_00070376-exon-scaffold_55-1575043694:329658..329863TCONS_00070376-exon-scaffold_55-1575043694:329658..329863Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_55supercontigscaffold_55:317921..329863 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.52375	0.963421	2.30942e-08	0	0	8.45425e-05	0	0.000685122	1.71486e-09	1.25409e-07	0	0.0330973	0.792038	0	0.337122	0.116156	1.39283	1.07088	4.33336	0.00119053	2.79927	1.43429	6.13041	2.35393	0	9.25219e-05	1.69591	2.69055	4.67169	0.620929
Blast
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BLAST of TCONS_00070376 vs. Swiss-Prot (Human)
Match: DHX37 (Probable ATP-dependent RNA helicase DHX37 OS=Homo sapiens GN=DHX37 PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.410e-72
Identity = 115/243 (47.33%), Postives = 158/243 (65.02%), Query Frame = 2 
Query:    2 YKSMVEIRKLRAQITNAVTSVCGEGNLYMDPKMQPPDHKQSEVIRKIVLSCVGDHVARKIPREEAKEKKLRNAYMCCLSEDPVYIHPTSSLFTKLPEYIVFHEIIETSKCYMRCCFEIEEEWLPSYAPYMCTLGKPAEEPAP--CIKEGRVFCHRSCNFGPHVWTLPACYVDSSDWPQRFRWFGRFFLEGLVITELEKNASLFLTPPAVMVKSWSHLQPKSERLLKALIDKDMDSEEKLRKAW 724
            YK+M+EIR+LR Q+T AV +VC E  L++DPKMQPP   Q   +R+IV + +GDH+AR++  EE  E K RNAY   L +DPV+IHP+S LF +LPE++V+ EI+ET+K YM+    +E +W+P+  P  C   KP EEPAP  C + GRV CHR+  F    W LPA  VD  +   R++ F RF LEG V  +L    S  L+ P  M+K+W+ LQP++E LL+AL+ +  D  E L  AW
Sbjct:  882 YKAMMEIRRLRGQLTTAVNAVCPEAELFVDPKMQPPTESQVTYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSYCQFDKPLEEPAPTYCPERGRVLCHRASVFYRVGWPLPAIEVDFPEGIDRYKHFARFLLEGQVFRKLASYRSCLLSSPGTMLKTWARLQPRTESLLRALVAEKADCHEALLAAW 1124
The following BLAST results are available for this feature:
BLAST of TCONS_00070376 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHX375.410e-7247.33Probable ATP-dependent RNA helicase DHX37 OS=Homo ... [more]
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