TCONS_00070375 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070375
Unique NameTCONS_00070375
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length849

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070375 ID=TCONS_00070375|Name=TCONS_00070375|organism=Clytia hemisphaerica|type=transcript|length=849bp
GATACAAATCCATGGTTGAGATACGGAAACTGAGGGCACAAATCACCAAT
GCTGTAACATCAGTTTGTGGTGAAGGAAACTTATACATGGATCCAAAAAT
GCAACCCCCCGATCACAAACAGTCTGAGGTGATACGGAAAATTGTGTTAT
CATGCGTCGGTGACCATGTTGCAAGGAAAATACCACGCGAAGAAGCCAAA
GAAAAGAAACTGAGGAACGCTTATATGTGTTGTCTATCGGAAGATCCCGT
CTACATTCATCCAACCTCCTCTCTGTTCACCAAACTTCCTGAGTACATTG
TCTTTCATGAAATCATCGAGACAAGCAAGTGTTATATGAGATGTTGTTTT
GAAATCGAAGAAGAATGGCTTCCAAGCTATGCGCCTTATATGTGTACGCT
TGGTAAACCTGCTGAAGAACCTGCTCCGTGCATCAAAGAAGGAAGGGTGT
TTTGCCACAGGTCTTGTAACTTTGGTCCCCACGTATGGACTTTACCAGCG
TGCTACGTGGACAGCTCTGATTGGCCACAACGATTCAGATGGTTTGGTCG
CTTCTTTTTAGAGGGACTGGTTATTACTGAACTTGAGAAAAACGCGTCTC
TCTTTCTGACACCGCCTGCTGTTATGGTCAAAAGTTGGTCCCATTTACAA
CCAAAGTCCGAGAGATTGTTGAAAGCTTTGATCGACAAGGACATGGATAG
CGAAGAAAAGCTTCGAAAAGCCTGGAAAAAAGACTCCAAATGTAAGTAAA
GAACGTAAAAGAATCATGGctttcatttttcataaaacatCTTAAAAAGA
CAAATTCTTTGGCAAGTTTGAAAACCGGGGATCCAAGGCTAGTGCGAGA
Run BLAST on NCBI

transcript from alignment at scaffold_55:317920..329863+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070375 ID=TCONS_00070375|Name=TCONS_00070375|organism=Clytia hemisphaerica|type=transcript|length=11944bp|location=Sequence derived from alignment at scaffold_55:317920..329863+ (Clytia hemisphaerica)
GATACAAATCCATGGTTGAGATACGGAAACTGAGGGCACAAATCACCAAT
GCTGGTGAGTGGTTTGCTTTAATGAaggctacacgctttttttataagaa
tattttttataagaatatcagggtgaaaattgaacaaattgtaagaatac
cctaagaataccctctagggtgaatttcacagaatttgataagaatacgg
tcattttgtatttggttaacagaaaaaaactgctttctatgttagagata
aattgaagcttttgGGAAGAAATGTAGTTTTAACcaatgttcactcaaaa
gtccaaaactctcaaattgatcatttcttatttttgtaaaaaagtcaagt
ctaaaaaagtaagaatacgttaagaatatttcaccctcaattttggcact
ttcttaagaatacttgatcctcaaccaaagtacattattcttataaaaaa
gcgtgtacattaAAGATATAATTTTTAAGATGTAGAAAAGAGGCGCGACG
GCGTATCTACGCTGGCAAAgcagaataaacaaaataatttacttCTATCC
GCATACATGTGTTTTGTCCTTCCCAGAACTCAGCAGTGCGCCAAGCGTAA
GCGAGCATATACAgctgttgtcaccagagtgctAAGCAAAATAACTTACC
AAAATTTGTGCTCGTGTGGCACTGGAGGGGAGAAAGCAgctctttctttt
gtttaaaaatgctgtgtaaggaAATTGTAGATACGTTAAATTATGTCATT
TAATATACCTGTCGACCCAATGCTCAGACCTACACGATAAGGTACTACTT
TCAATTTTACTATGGAGTAGAGGTGTGCAAGGTTGTGCGTTAAATCCCCG
GCCGGATACAAAATTGAAACttaatgctcagcaattaagagaaggacaAA
AATTAAGTGGAGCAATACAGTGAGAAAGATTGGCGCTCTATCCTACATTT
GGGATAGTTATCGAAGGAACAGACTTACTACTTACAGACTCTGTCGTTTC
TAGAATTGCATTTTTTCAGGGAAAGAGAAATCATAAAAGAGAGAATTTCT
CAGAATCTTTATTAAAATGTGAGTGCTGATGGATGGATTTTGCTATATAA
AGATAAATTTCCGATTTACAGTAACATCAGTTTGTGGTGAAGGAAACTTA
TACATGGATCCAAAAATGCAACCCCCCGATCACAAACAGGTTTGCCAATg
tcaatgggccattccattctatattcatacagggggtggacgaaaaTTTA
ATAGTAATACTCATTTTTGTTGGTCCAACCATACTTTTAAcgtatgaaaa
taatttttccaagactgcttttgcaaattttgccattttcaagGGCGTAT
CACcacatttctaaaaatctttttttgccttaaaaaggttcgtccaccac
ccccctgtatggaaatttaatggaacagcccaatcaTAGTTTACTTACCT
ATTTTAAATAAATGCTGGTCTTTAGCGACGTATTGACTTTAAATATCCAG
TTAAATATCGACCAAAATTTCGACTGAATGCGAGTCGATATATGTCAAGA
GACATTATAGGCCTTGGGCAGTTtcacttttttcaggttttctctTATCA
AGCTTTTGTAATTGATCGTTATCAATTCCTCGAGGGtactgatttgaaat
ttaactGTATGAAAATCCGCAGTTTTTTGTATTGCTAGGTATAACAGAAT
TCATGATTGTTTTTGGGTCTTCAAAATTAAAACGTGTTATAGCTTTGAGA
TAGCAAAAATGTCTCACAAATATTTACTACAGTTTTCTAGAATCCGTTTT
TTTATCACCGACGTCACCTTTGCTTTTTGATCGTGTGATTGGAATGagga
ttttatcttattttatcTTTCAGTCTGAGGTGATACGGAAAATTGTGTTA
TCATGCGTCGGTGACCATGTTGCAAGGTAAGTCATTGTTAATTTAAgcga
aaattaaaggttttatttttacataagtgttcccgtctCTCACTTACTTC
TTCTTTAGCTCGTGTTCGCAGGTGCCAACATTGAGTGGTTAGGGCGAAGG
CTAACCAtatccttctttttctttttcttcaagacCTTTTTGTAGAACTC
GTCTGCTGACCGACCATCAAGCACGTCTTCGAGTGTTTTGATTGNgttcc
ccccccccccccccccccctgtatggatttttAATGTAACAGCCCAATCA
TAGTTTACTTACCTATTTTAAATAAATGCTGGTCTTTAGCGACGTATTGG
CTTTACATATTACAGTTAAATATCGACCAAAATTTCGACTGAATGAGTCG
ATATATGTCAAGAGACATTATGGGCCTTGGgcaatttcacttttttcagg
ttttctctTATCAAGTTTTTGTAATTGATCGTTATCAATTCCTCGAGGGt
actgatttgaaatttaactGTATGAAAATCCGCAGTTTTTTGTATTGCTA
GGTATAACAGAATTCATGATTGTTTTTGGGTCTTCAAAATTAAAACGTGT
TATAGCTTTGAGATAGCAAAAATGTCTCACAAATATTTACTACAGTTTTC
TAGAATCCGTTTTTTTTATCACCGACGTCACCTTTGCTTTTTGATCGTGT
GATTGGAATGaggattttatcttattttatcTTTCAGTCTGAGGTGATAC
GGAAAATTGTGTTATCATGCGTCGGTGACCATGTTGCAAGGTAAGTCATT
GTTAATTTAAgcgaaaattaaaggttttatttttacataagtgttcccgt
ctCTCACTTACTTCTTCTTTAGCTCGTGTTCGCAGGTGCCAACATTGAGT
GGTTAGGGCGAAGGCTAACCAtatccttctttttctttttcttcaagacC
TTTTTGTAGAACTCGTCTGCTGACCGACCATCAAGCACGTGATCTTCGAG
TGTTTTGATTGGTCGGCCTCTCTTCTTGTTAATGTTGTCGTTGAAAAGCA
GTCTTTTGACGATGCTGGTGTTCTTTTGTCTTGCAATATGGCCAAGATAG
TTTTGCTGATGTCATTTTAAGTATTGAAGGATGTCTTCAGTCTTACAGAC
GTGTAAAACATCTTCACTTGACATTTGTTCATTGTTTTCATCGATTCTTC
TTTCAAGACCGCCTCTTACCTTCTTACGAAGCATATTAATGTAGATGGAT
CGGATtcgctgttgttgttgttgttgagtgaTATTCCACGTTTGACAGGA
ATATGTCTACCGGCTGCGCACcatcactttttctattgtttaagtgacgt
attgggtggaaaattttaatacTTGGTTCATATCATGAATACCCTTGTTT
TCAGGAATATCTTTCGATTGTGTAGTTTTTTACTCATTTAATTGTACTTG
TTTTGAGCAACAACAATTCTTAGGTCAATAGTCGGTATTAATTAGTATTT
AATTATAACTATGTCAGACCAACGTTaaataaattggaaaaaaaaaaata
aaaaatctctgCATCTCCTGTTGAAAGTTGATTGAAGTGCATGTCTTCTT
AGGACAGTGTTTGCTTATTGTtttattgtgctgatataagcaaaacaatg
tttttcttttcctctttcttaccaatcttgctccacatctgtgccAATTC
AATATATCAataagcttgtaaattaaattgatgagtaagcaaacgatatc
actcttatttaagaACAAAACCTTTTAATCTTAATCTGCTTTTTATCAGG
ATATACTTCCAAAAGTGGGTCAGTAAATCAAAAGTTTTCAGTTGATCGTC
AGCATTACAAATCAGGAAATCTCGATGACGAGagtttgaaaacaaaagtt
atgtcTCAGCGCAAAAAAAACCATTTAAATGATGCATATTTAAATCCTTG
AAATTCGGGGAGGCTGTCGAAGATTTGTTTCAACAGTCATCGGTTCATGT
TCTCGGCTCTGTTCTCGCAAAAgtatttgataaaatatattttgcctttc
aaaattttaatgtaCCTGTAGTAAAATGTTCGCTCCTCTAGTTATGGGGC
AAGTTGAAGTGGAGTTCTTCTGGAATTTATATTTTAGATCTGTTTTATTT
GCACTGGTACAGTATTTTGATTTAATCAACAGAACTAGAAATATTAAAAC
ATAAACAATTTATGtcaaataatataaaatttgaactaCTTATACCGCTT
AAAAATAATCCTGAAGTtgaattaaaacatttttcagattttcaaaattt
ttaagaacGACATGCTGCCAATCTTCCGTCTTTGGCCGTCCTTCGCTTAA
AGATGACGTGTCCTCCTTGTAGAATGCTGTTGCTGTGCAAGATACAGTTG
GACCACATAAGATCCCACATCTAATTGTGGAAATGTGAACAAGTGTGGAC
CTTGCCCAGGCGTTGGTGGAGGTAGTTTAACCCATACGCTAATTGAACCT
TCGACCTGCAGCTTAATATTACTAAAAAAGCTCTCAATGCGCAAACTGTG
TTGTCTTGTAAGACTCGCAAATACTTAATTCTTTCGTGGTTTCATTAATT
TATGAACATTAATTTGTTTTTTAGATTTGATCGAATTTTCTCCACCATTT
TCATTTATTGTTGATATGTAATTTTGAATCGATACCACTGGAATGCATGA
TATGAAAGCAATCACAAATTCCACAATCTAGTATTCAAAACTGCTTTGCT
CTCAATCAAAATTacattcattttgaaatttctttaacaATCTCTTATCA
ACGTAACTTTACCATTCGACATTTTATTATTCGATAAACTCCTATTCCGG
AGAAATAGTAAAAGTCCCTTCCTTGACAAGGGACACATTTCCGTtcactc
tcgggtacctaatagggCTCATCACTCATCTTTATGAAATCATCTGAAAT
TAtatcatctttttaaaatgttgagtttagcgattttagctgggttttac
gtcatatttcaaaataaagactTGATCTGGACGTCCTATGACCTTAAAAA
TTGGAATAAGCACCCTTGATAAGATTAAGAAGTCAGAAATTTCCAAATTG
TTTCACCAGCGTGGTAGACTTTACCCCCGCTTCACTTGTTCTTGCTTGAG
GAAGGTTGAAGTTTCCTTGCTTTAAACTCGATGATTCACTGTCTCACTGa
ttcacacaattttttttttttgcgttcaAGTAAATTTGAAATTCGATTCC
TTAAAGCAGGCAAAGATGGAAGAATCCTTCCCATAAACTTACCCAGCTTT
Agcttgcacacaacgttgtttcaacgttcatctaacgtcatatggacgtt
atgaacgttaaataaacgttaaaacaacgctgTGTTCCAGCTGGGTAATC
TAAGGATACACCGGTATCTTTCTCGATAGCTGTGATAGTTTTAAACACTC
GGATGGACTTAAATTAACGAGGAACCTGAATCCACCTGAGTTGATCAAGT
GAAATGAAGGGGAAATTTCTTGAAACATAAAGGTTCGCTACCTGTGAAAA
ACAAAGACAGCTAACGAATTTATTTTCCAACAAAAtaactcaggtaagtt
atggtaTGTCTCAAAAATGaacatttaaataatttttgaagacCATTAGC
CGGCAAAAATTTNCTTGCCCAGGCGTTGGTGGAGGTAGTTTAACCCATAC
GCTAATTGAACCTTCGACCTGCAGCTTAATATTACTAAAAAAGCTCTCAA
TGCGCAAACTGTGTTGTCTTGTAAGACTCGCAAATACTTAATTCTTTCGT
GGTTTCATTAATTTATGAACATTAATTTGTTTTTTAGATTTGATCGAATT
TTCTCCACCATTTTCATTTATTGTTGATATGTAATTTTGAATCGATACCA
CTGGAATGCATGATATGAAAGCAATCACAAATTCCACAATCTAGTATTCA
AAACTGCTTTGCTCTCAATCAAAATTacattcattttgaaatttctttaa
caATCTCTTATCAACGTAACTTTACCATTCGACATTTTATTATTCGATAA
ACTCCTATTCCGGAGAAATAGTAAAAGTCCCTTCCTTGACAAGGGACACA
TTTCCGTtcactctcgggtacctaataagtgGCCCACTCATCTTTATGAA
ATTATCTGAAATTAtatcatctttttaaaatgttgagtttagcgatttta
gctgggttttatgtcatatttcaaaataaagactTGATCTGGACGTCCTA
TGACCTTAAAAATTGGAATAAGCACCCTTGATAAGATTAAGAAGTCAGAA
ATTTCCGAATTGTTTCACCAGCGTGGTAGACTTTACCCctgcttcacttt
ttcttgcttgaggaAGGTTGAAGTTTCCTTGCTTTAAACTCGATGATTCA
CTGTCTCACTGattcacacaatttttttttttgcgttcaAGTAAATTTGA
AATTCGATTCCTTAAAGCAGGCAAAGATGGAAGAATCCTTCCCATAAACT
TACCCAGCTTTAgcttgcacacaacgttgtttcaacgttcatctaacgtc
atatggacgttatgaacgttaaataaacgttaaaacaacgctgTGTTCCA
GCTGGGTAATCTAAGGATACACCGGTATCTTTCTCGATAGCTGTGATAGT
TTTAAACACTCGGATGGACTTAAATTAACGAGGAACCTGAATCCACCTGA
GTTGATCAAGTGAAATGAAGGGGAAATTTCTTGAAACATAAAGGTTCGCT
ACCTGTGAAAAACAAAGACAGCTAACGAATTTATTTTCCAACAAAAtaac
tcaggtaagttatggtaTGTCTCAAAAATGaacatttaaataatttttga
agacCATTAGCCGGCAAAAATTTGTAAACCAATGATTTACTACCATgaaa
acttcatcatggtatcCTTCGTAGTTTgtaattttggtaattttggtaat
ttttggtAATAATGGTAATcttcaggtttttgagacatgccataacttac
ctgagaaGGATGTTTTGCTGCGTAACAAGTGCCTTTAAAACAACTTTTCT
CACCTCTTTTTAGGAAAATACCACGCGAAGAAGCCAAAGAAAAGAAACTG
AGGAACGCTTATATGGTATGATGCTTGTGGTtagcttacacgttttttta
ataagaacatccaaaatttttgaagccgttttaagccttaaaatgttctt
aacatattcttattttcgccattttttagtatttttgcccattttcctat
gaaatttgATGTCCTacagtctgcaaagccttaaaatgttcttaacttgc
tcttgaTATTTCGGccttcgaagccttatgtttttataaaaaaaacgtgt
agtttgtAGGTCAGCTCTCGCATGGCTGATTATTCTATATGGTGACGAAA
ACTTTAAAACTGACTTTTAGTTggaagaaaagagaaaagattACAAACCA
CATATCGAAAACCGTTATATAATGTCCTGCTCTAAactatacgtttttta
taagaacacgtgGCCCATTTTTGAACAGATTTAAAGGAAACTATGAGCAA
TCAGAATGcttgaaatttcagaaaaaactcTAGACATTGCAAAAAACTGC
TGACTTTACGCCCTCAATCAACTAAAATTTACTTGtcccatggcgttcta
aattaaattattaaataaTGCCATGACTTGTCCTCATAACAAAGCTTGCt
atcctttttctttttattctcaTTTCATTTCAACATTCTAGTGTTGTCTA
TCGGAAGATCCCGTCTACATTCATCCAACCTCCTCTCTGTTCACCAAACT
TCCTGAGTACATTGTCTTTCATGAAATCATCGAGACAAGCAAGTGTTATA
TGAGATGTAAGTTTCAACATTCAGTTTGTCGACTTCACAGCTTTCGCAAA
TGGTGAAAACGAGTTGATTTACCCGAATGggtttgatttttaaatttaaa
gaaaaaacaacaatgttttattttattaaaattgagcaaaagcttTTTGA
TTAAAGATCATGATGATCTTTAAATTAACTTTTGGAgtggcaaaatttca
aatgaaaaaatttgatttctcGTTCCTTGTTTTTGAACTGTAACGTGCta
aagcactgggctcaacttcagtatacgtgtgaaagtgaaaggcccaattg
taaacactttttttaaaagggcAATGGGTACTAGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaaaaaaatttg
attttttgttccTTGTTTTTGAATACGCGAGATAAAGTTGATCAATTATA
CGACAAGCAAATTCTTTGTTCCATTGCTTGTCTTCACTTTgttgctttaa
aatttgaatttcaaacACCATAGTAGACGTTTCCATttatttttcaacta
tttttattaaaaatgagGCTTTGGGAAAAGTTCAAATAAcgaattaagaa
caatcctagTCTCAGGTTTCGAAGAAAATACTGATTTTAAACCTCTCCTT
GCCTTTAGTGGTCAGAATATGTAGATATTCTTTCGTAAAAGGACTGGTTA
CCGGTCCTCCACCTCACTAGCTGGCTATAGCTCAGAACCATTTATTTTCG
CCGAAAATGTCTTCGTTGTTTTAGAAATCTGAGACCGAGAGCTTTGCATC
GGTgccaaaacttttttcttaaacCCATTTTTAGAGCCACAATTTCCATT
CGAAGTtggatttttaaaacaaaagattacaaaaaaagggcgtggtcaca
aGCTCCACAAAATAAGCATATCAAGAAAGTTTAAGATAATTTAAACccaa
aaatcgcgaaaaagTCAGAACAACCAAGCGGTAATATACTGGCtgactgg
ttcttataaaaaatcatgtATATTACGCTTTTGAAAAACGTCAATTTACG
GTCAATCGTTGTCTAGCTCTAGAGAGTCGTGATACATGCCCTCTTAAATA
CCTTTTTACAATATTACTTTATTCTCAAAAAGCTCGGTTTATCTTTTCAC
TCCCACTCATAGGTTGTTTTGAAATCGAAGAAGAATGGCTTCCAAGCTAT
GCGCCTTATATGTGTACGCTTGGTAAACCTGCTGAAGAACCTGCTCCGTG
CATCAAAGAAGGAAGGGTGTTTTGCCACAGGTCTTGTAACTTTGGTAAGT
GATATGTTATCACTTTAACCGTGTTGGCAATGGAAAGCTTGACTTATTAT
TTAGTATTTAGTTATTTGGGGTTTTCAGATCGAGGGTCCTGGAGTCGTAG
ACATAGAGTCCTTCTCCTGATCTATTTTTAAGTGATATAGTCTCAAAAGT
GTACTGCAAGAAAAATTAGTTTGTAGCCTTTCTAGGGATCCGCTTATTCA
Acttggctgtttttttttttgcaaaaatattcaaataataatgcttatcg
gcgatccaaaaaatatctgcaatctgattggttaaaaagagtacaatata
tcttgtattttacatgtaaaaatataaattgacgaaaagatgttgttgNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNattttcctcgcctaaaggctcggaaaatattgtacg
gaaaaatcgcggaactcgtaaaatatttctcatattgtactcgcaaatgt
ccgataactattacttaaaataaaatataaaccGGTGGCAAAATACCCGT
CAAAGAACCCGTCAAAGAACCCGTCGAAGAACCCGTCAAAGAACCTCATG
AAATCGCTAATcacttttttctaattcttttGCTTCTTCAGGTCCCCACG
TATGGACTTTACCAGCGTGCTACGTGGACAGCTCTGATTGGCCACAACGA
TTCAGATGGTTTGGTCGCTTCTTTTTAGAGGGACTGGTTATTACTGAACT
TGAGAAAAACGCGTCTCTCTTTCTGACACCGCCTGCTGTTATGGTCAAAA
GTTGGTCCCAGTAAGTTGCAGCCACattaacttttaatttttcatcgcTT
GACTTCTATaatacataaaaaattttcagactcaaaattttgatgCAACT
TACATGTACAACTAATGCCGCACTGTTCCCATTCCTGATGTTTCATTTGT
CATCTAAAGAAAGTCTCTCATTATATAGTATAATAACTTTACCACTCGAA
AGCTCTCAAATAATCCAACCATTATGTTAGTTAAAGACCAAATTGCAGAC
CAAATAGATAGTTTACAAGATCTGCTTTCAGTTGCAGGTTACAGTGAAAc
ggctttttttattttttataattatttgCTTACTTAAGTTTACAACCAAA
GTCCGAGAGATTGTTGAAAGCTTTGATCGACAAGGACATGGATAGCGAAG
AAAAGCTTCGAAAAGCCTGGAAAAAAGACTCCAAATGTAAGTAAAGAACG
TAAAAGAATCATGGctttcatttttcataaaacatCTTAAAAAGACAAAT
TCTTTGGCAAGTTTGAAAACCGGGGATCCAAGGCTAGTGCGAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043834XLOC_043834Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070375-exon-scaffold_55-1491911889:317920..317973TCONS_00070375-exon-scaffold_55-1491911889:317920..317973Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1510915933:317920..317973TCONS_00070375-exon-scaffold_55-1510915933:317920..317973Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1575043694:317920..317973TCONS_00070375-exon-scaffold_55-1575043694:317920..317973Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1491911889:319041..319108TCONS_00070375-exon-scaffold_55-1491911889:319041..319108Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1510915933:319041..319108TCONS_00070375-exon-scaffold_55-1510915933:319041..319108Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1575043694:319041..319108TCONS_00070375-exon-scaffold_55-1575043694:319041..319108Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1491911889:319793..319845TCONS_00070375-exon-scaffold_55-1491911889:319793..319845Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1510915933:319793..319845TCONS_00070375-exon-scaffold_55-1510915933:319793..319845Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1575043694:319793..319845TCONS_00070375-exon-scaffold_55-1575043694:319793..319845Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1491911889:324883..324934TCONS_00070375-exon-scaffold_55-1491911889:324883..324934Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1510915933:324883..324934TCONS_00070375-exon-scaffold_55-1510915933:324883..324934Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1575043694:324883..324934TCONS_00070375-exon-scaffold_55-1575043694:324883..324934Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1491911889:325561..325675TCONS_00070375-exon-scaffold_55-1491911889:325561..325675Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1510915933:325561..325675TCONS_00070375-exon-scaffold_55-1510915933:325561..325675Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1575043694:325561..325675TCONS_00070375-exon-scaffold_55-1575043694:325561..325675Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1491911889:328182..328313TCONS_00070375-exon-scaffold_55-1491911889:328182..328313Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1510915933:328182..328313TCONS_00070375-exon-scaffold_55-1510915933:328182..328313Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1575043694:328182..328313TCONS_00070375-exon-scaffold_55-1575043694:328182..328313Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1491911889:329161..329329TCONS_00070375-exon-scaffold_55-1491911889:329161..329329Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1510915933:329161..329329TCONS_00070375-exon-scaffold_55-1510915933:329161..329329Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1575043694:329161..329329TCONS_00070375-exon-scaffold_55-1575043694:329161..329329Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1491911889:329658..329863TCONS_00070375-exon-scaffold_55-1491911889:329658..329863Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1510915933:329658..329863TCONS_00070375-exon-scaffold_55-1510915933:329658..329863Clytia hemisphaericaexon
TCONS_00070375-exon-scaffold_55-1575043694:329658..329863TCONS_00070375-exon-scaffold_55-1575043694:329658..329863Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_55supercontigscaffold_55:317920..329863 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.43136	2.71809	2.70244e-09	0	0	2.03465	0	1.99347	0	0.0219283	8.73833e-08	0.71582	3.08842	0	0.652313	1.96347	2.96413	0.119569	0.631182	1.14977	0.319971	0.195634	0.760099	0.240792	0	1.47538	0.198763	0.357916	0.591129	5.49826
Blast
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BLAST of TCONS_00070375 vs. Swiss-Prot (Human)
Match: DHX37 (Probable ATP-dependent RNA helicase DHX37 OS=Homo sapiens GN=DHX37 PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.410e-72
Identity = 115/243 (47.33%), Postives = 158/243 (65.02%), Query Frame = 3 
Query:    3 YKSMVEIRKLRAQITNAVTSVCGEGNLYMDPKMQPPDHKQSEVIRKIVLSCVGDHVARKIPREEAKEKKLRNAYMCCLSEDPVYIHPTSSLFTKLPEYIVFHEIIETSKCYMRCCFEIEEEWLPSYAPYMCTLGKPAEEPAP--CIKEGRVFCHRSCNFGPHVWTLPACYVDSSDWPQRFRWFGRFFLEGLVITELEKNASLFLTPPAVMVKSWSHLQPKSERLLKALIDKDMDSEEKLRKAW 725
            YK+M+EIR+LR Q+T AV +VC E  L++DPKMQPP   Q   +R+IV + +GDH+AR++  EE  E K RNAY   L +DPV+IHP+S LF +LPE++V+ EI+ET+K YM+    +E +W+P+  P  C   KP EEPAP  C + GRV CHR+  F    W LPA  VD  +   R++ F RF LEG V  +L    S  L+ P  M+K+W+ LQP++E LL+AL+ +  D  E L  AW
Sbjct:  882 YKAMMEIRRLRGQLTTAVNAVCPEAELFVDPKMQPPTESQVTYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSYCQFDKPLEEPAPTYCPERGRVLCHRASVFYRVGWPLPAIEVDFPEGIDRYKHFARFLLEGQVFRKLASYRSCLLSSPGTMLKTWARLQPRTESLLRALVAEKADCHEALLAAW 1124
The following BLAST results are available for this feature:
BLAST of TCONS_00070375 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHX375.410e-7247.33Probable ATP-dependent RNA helicase DHX37 OS=Homo ... [more]
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