TCONS_00070363 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070363
Unique NameTCONS_00070363
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2228

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070363 ID=TCONS_00070363|Name=TCONS_00070363|organism=Clytia hemisphaerica|type=transcript|length=2228bp
CCCAGATCAACAACGACGCGAGGAAAGGGATGCCACGAAACATACCACCT
AGATCAGCAATAAAACAACAATTAAAACAACCAAGAAGTATTACACCAGA
ATTCAAGAACAAGattAACCACCGAAGTATCTCCAGAACTGCCAATAACA
AGGTGTCATCACTACAACGCAAGCTAGCACCACCCACTATCAACACTAAC
AAACATTTATCACAAATGAAAAAATCGTCCAGCCAATCATCACTACATTC
ACCAGTAACCAACAGAAGACTTGCCAACGCCTCATCATCTCTCAGCAGAT
TGAAAACTGCATCATCGTCAGGCGAAACTAGAGATCATAACAAATTTTTC
GTTGGCTCCAAGttcaGGAAATTCAGAAAAGGAGGCTACGTTCcaaaGCA
AGAAACCAAGATCGACCTAATGAGCCCTGATTCAATTTTATCGACCGTTC
AACTCAAAgaTCTTTTCAACGCGAGCACGTTTCGTCTGTTGCCACCGGCA
TACCAGTATCAATTGTTGATGCTTCTACCTGAATGTGATCGGATAAGTAA
TAAAGATGGCTCACTCAGGCTATCGTCCGCTTGCTTCAATAACGGATTCT
TTTCACGCGCCTGTCAAGAGTATAAAGATAAACTGATGGACGGTGACCTT
AATTCAGAGATCACCACTAGGGCAAAACAAGAAATCAAAACTTACACAAG
ACTAGACCCTTGGAAGGTCAAATATTTTGAACCAGTTTACGGACAATCCT
CTGTCAAAGAAGACATTCCAGAAGATGAACGACCTCACGATAACATCAAA
CCGATACAATCTTCCTGGGTTCCTTTCCTCAAATTCGCTGAAAATTCTAC
TGGTGAATACGAGAGATCATTGTCCAAAATTCAGGCACAAGTGAAAGAAA
CGAGGGAGAGAGAAGCCAGAGAGAAAGAAGAAGCGGACCGTCAACGAAAA
GAAGAACTCTCTCAGCGTTCAAACCTTCTGTCGGCTCCCACTTCATCCTC
GTCGTCCGCTACTCCCAACAAACTCAACAAAACGCCTTTCCGATGTGCTC
CACTACGTCACCAATCGTCTCTAACACGGTCACCGCATGCTCGTTCGCCA
ATGACGACGCGGCCGCCCACCAACCGTCTCTCATCAGTAGAATCGAGTAA
AGAGAAAAGTAAACGGGCGTTAAAGCGTGCACAATTATTGCAACGTAAGA
AAATCTTCGATAAACAGTTAAAAGACGCGAAAGCACGGATATTAGAGGAC
GCACGATCGAACAGTGTGATAAAAGAAAATCGCAAACAATTTCTAACACG
ATCAGCTTCATCTTCATCAGAAACGGAAAAAAACTTAACCACTGTAACCT
CGTCAAGTCCTTCAAAAATTCTACCAACCGCTATCAAGAAAGATAAAGAT
CTAACAAAACTTTGTATCGTATCGTCTTCGTCTACAACGTCTCTATCATC
GTCCTCTCCTTCCTCAACTAACATCAATACAACAAACAACTCTTCTTTGA
CAACAACGACCACAATTAATCCTTTGTTGCAAAAATTCATACACGACAGC
GAAACAGCTGTTGCGGAATCATCGTCACAATATGTTGCGCAATCCTCTAC
AACAACAGAAACTACCTCGACAGACTTAATGTCAAATACAACGTCTACAA
CCCTAGCATTGGCGACTCCGAACAACACTTTAACGACAACCAGTACGACT
ACTTGCAATCATAAGAAAACCGATACTACGATCATTAAAACAGCATCGAA
CAGTAAAATTATTCAAGGTGCCGCTAATTTTGGAACGAATTCAAATGGTT
CATGCCCTTGTAACGTCAAAGCTATGTTTCTTTGTAAACGTTGTGGCTCA
GCGTGGCACGGGGATTGTATAAATAGTGACAAAATTTGCATTTCTTGCTC
ATAGAGTTTATCCTGTTTGgtctgttatttctattttctagCACTGCTgt
atttcaaattattatttttttcagattttgaaatTCTCTTCAATCTCTtt
tatatatactttttttcCCAGTCACCGTTTATTATTATAATAGTATATAT
AATAATTCATTCGTTTTTAAAAATCTCGTTGGTTTTAGAATTGTTGATTT
TAGTTCAACtcatacttttatttatttttgtagaaaaatattTGTTCAGA
TGTTTCTCTATCCTTCACCGAACTTGGTATATTTTTCCCGATAACGGTCT
GAAAATGTTAGAGAATTATTCATGAGTC
Run BLAST on NCBI

transcript from alignment at scaffold_55:178443..186589+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070363 ID=TCONS_00070363|Name=TCONS_00070363|organism=Clytia hemisphaerica|type=transcript|length=8147bp|location=Sequence derived from alignment at scaffold_55:178443..186589+ (Clytia hemisphaerica)
CCCAGATCAACAACGACGCGAGGAAAGGGATGCCACGAAACATACCACCT
AGATCAGCAATAAAACAACAATTAAAACAACCAAGAAGTATTACACCAGA
ATTCAAGAACAAGGTTTGCTTTTCAATGTCTATTAATTTTCAGAATTGTT
GCTATATTTCTTTTCTTACCTGATTTAAAAAGGGTCTACGTGCCAAGGTT
TTTCTCAAACTTAAATCCAGAAGTTATAAATTTGGTCAACATTCACATCT
GAAATTGCTCTAGATTAGCCCTGCCAAAAGGACCATAATTAATACTACTT
TAATGTCACTAATAACCAGTATTGTGACTGACACAAAAAAAATATGAATA
ATACCCTTTACTAAATTCAAAAGTTTTTTTTTGGTGATCAAGAAGAAGGT
ACATAGCAAAAATGCCTAATGCTTAGCAAGCAAACAAACTTTTTGTTATC
ACTAAGATTCGTTTCAAGTTTTTGTAATCTCCTCAATTGTACTTAGATCT
TCCCTCTATTTCCTAATTGATAATCTCTTTAAACATTTCTACCTGAAATA
TATCGTCGTTATACTTTAGGAGAATAAAAATGACTTTTTCTTTTTTTAAC
TAACGAAGTCTTAAACTCTAGCTTTTCTTCGTGAGTTTAGAATTATAGTA
ACTTGGTGTTTTTTAATACAATTTTTAATCTGTACGTCTTTAGTCTCTCC
CTAAAACTGAAATCTTCATTTAATACGAGTGTGAACTAAACTTCCCTCCT
AaaactaattatttttttctagtaGTATTGACCTATTGTCATTTGATAAT
TATGCTCTGCCCAGTCATGTAAAATGCAtttctaaatattttaatgatag
GACATAATTTTCCAATATCTTTTCGAGAAGCAATAATCATTAAATTTCTT
GGTTAGAACAAAAGGACGTCATTTAAGAACTCACAACTATTTCTCTTAAT
GACTTGTTAATAGCTTCCATATCGGTTTTACAGGAAAGCAATTTCAGGTT
AACAGTGTGTGGTATGGTGTGTCAGGTTAAAGTTTCATCGTGACATTGTT
GTATTTATAATAAGGTTGCAGTTTTCAGTGTATAAATTTCTACATTACTA
AGGTATAGGAATATTTGTACAAGTAGCTTGTCAATACAATAAGTGAATGA
GTATGTGCTGTCCTAAGGAAcatgtaaattttatttttatttaaacgAGA
CAATCATGGTATATTGAATTCAACGAAAAGTGCTTTTAGGAGCATATGAT
AATATCAACCagctagccgtatgcgcagcgtcgcacgctgcgtgtcccaa
tccagtgaatcactacacatctaaaaaactctaacggaagaaagatagct
gccgattgatgataagattttgattttataaaagaaaggagaaaaaagat
aacattgcattgcaatttttaaccacaattaagtAAATGGCTTAGAAGAA
Atatatttcagatttttttagccatcgtggctggatattcgagggtgact
ttgaaagactttaaaaagttttgaaagtaatagggagccgctattgtaaa
cagaaagttttaaagtgcttttgaataagaaatcatcaaaatgaaaaata
atatttgggaagaaggttgattttaacccgcCCAGCTCCAAACTTCCTgt
atagaaaatagtatcttggcgtctcaaagttagtctagtggtaagAAATC
TGCAtaaggtgcaaaaagatgatggttcaacgccacgAAAATGAGATTTT
GTAAAGATTTGTTATAGTTCCgaaaacttttttacaaaacgttgtaaaca
cacacgtttttcTCCTTTGACAAGATGATGGTTATcaccttttttttatt
taaccagattAACCACCGAAGTATCTCCAGAACTGCCAATAACAAGGTGT
CATCACTACAACGCAAGCTAGCACCACCCACTATCAACACTAACAAACAT
TTATCACAAATGAAAAAATCGTCCAGCCAATCATCACTACATTCACCAGT
AACCAACAGAAGACTTGCCAACGCCTCATCATCTCTCAGCAGATTGAAAA
CTGCATCATCGTCAGGCGAAACTAGAGATCATAACAAATTTTTCGTTGGC
TCCAAGGtatttttttgtagttttgCGCATAATTTTTTTAGGTTAAGTAT
GTTCTAGTTGCTATTGATGGCTCGAGAGAAAGTGTTAAATACCTGTCACC
AAGAGATTCACATTGGGTACTTTTAACAAGGATCTTTGTTGGTAAGGTTT
CTTAGCTCAAATAACCACTGGCAGTGTTCTAATATTTATTTTGTATACTA
AAATAGTATTAGACGTACCTTTTTGTTCAACCTGCTCCAATATACCGGCT
TTCCCCTACTCCAAAAGTCCAAAATGTGTTATctaaaataagaaatattt
atttttattttagttcaGGAAATTCAGAAAAGGAGGCTACGTTCGTAAGT
TTGTTCATCATTTTCCTTCAGAAAGTTAAATTTGACTTGATGTTGAATTT
AAGGTATATTATGACTTCGATCCTTGATTAAAGTACTGAtaattttattc
ctttttttataTTCCTGGAGTAGCCATTTTTAACATaagttttctatttt
tctattttagcaaaGCAAGAAACCAAGATCGACCTAATGAGCCCTGATTC
AATTTTATCGACCGTTCAACTCAAAGTAAATTTCTATCTCAATTAATTAC
TATTTTACAGGCTCTATCATCTCCTTTTTTTATGGCAATTAGAAAGCTAT
TTATTGCCATTTAACGAGAGTTTTGTCAGTCATTATTAGTTTTGAAGGAT
TTCAGGTTTATTCTtgcatttatttcatttttttgtgNGACCGTTCAACT
CAAAGTAAATTTCTATCTCAATTAATTACTATTTTACAGGCTCTATCATC
TCCTTTTTTTATGGCAATTAGAAAGCTATTTATTGCCATTTAACGAGAGT
TTTGTCAGTCATTATTAGTTTTGAAGGATTTCAGGTTTATTCTtgcattt
atttcatttttttgtggTTTTCAATTAGTAAATTCTTTGCCAGTAATCAT
TTAATAAAACTGCCTGTGGTGTATTTCTCCTTTTTGTAATGAGGCATTGC
ACCTACTCTGTACCAGattgtatctcacgtttatcgtttcgtagtacact
ctgtgcgcattgtctgtttgataaaaaaattcccgcatggagacctctgc
gatgaagcaTGAATANCGCATTgtctgttaaaaaaaaaattcccgcacgg
agacctctgcgatgaagcaTGAATAAtgaatagcaacacttctctcattg
TCTCCCCTTCTTCCCAACACTCAATTGCAGTGGTCGCTTTGAAAagtctc
aaatgagaaaagacaatgacaacagaccctctacagcaatgaattttgaa
attagccgtagatacagGGTCTGTGTACAGAGAACATTGCACTCTACTAT
GTTTAGAAGGAGTAGAAACAGGTAGAAATACCATTTAGCCTGATTTAGCC
CGTccctttcaattttgaagagTAACCTCTTACACcaagtattttgaaaa
aaaaaagatttttcataaacACAACTGATTTCAAAATATCTCATGTTCCA
CCCACCCATCATGAAACTGTCCCATCTTTCGCTCAGTCAGATCAAACCGC
CCATCAAAACCAATGTATTCAGCCactcccaggggggggggggggaagaa
GTTAGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGATTctgtgaga
aaattaaaaaaaaaagaccatattttaccaaaaaaaagttatgggaagta
gatttttttttcaaattttcgaatttttttttaaaaatcttaaaaacaat
ttgctggttgcaatagaaatttgattttctaaaatNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTACTAACTTCTTCCGAGAAAGCAgttagtaggcatgatg
tcttgtactaactgcttcaccccccctGCCACTCCCACTAGccacaaaat
caaaatttataaaactgATTTCCCATtgatatgagattttttttttgaca
ttttaggaTCTTTTCAACGCGAGCACGTTTCGTCTGTTGCCACCGGCATA
CCAGTATCAATTGTTGATGCTTCTACCTGAATGTGATCGGATAAGTAATA
AAGATGGCTCACTCAGGTAACCTTGCATTTACAGTCCTCTTCTAAAGTAG
GCTGAGTAGTAGGAAGCTTCTCATAATTCGAAATGTTTTATTTAATATCG
GATAAGAGAGAGTCGAGTCGTTGCACCTCCCCCCTCCATCAACTAGTTGT
TTTGGGCTTTGTTTGAGTTTTGGTTGCCCACCTCGTAAATTCCCTAACTT
GTCTCGAATTTCTAGAAAAGGTAGATCTAtgatttcatttttaagttACA
CCTTTTATATTTGATAACCTAAATTACCCTGAATTACTACCTATTCTGTT
AGGCTATCGTCCGCTTGCTTCAATAACGGATTCTTTTCACGCGCCTGTCA
AGAGTATAAAGATAAACTGATGGACGGTATGTTTATTAAGTATTATTGCT
TTCTTCATTCTTTGGGCATCTATCCCTATATTTTGAGTGTTTGGATCCTG
ACAACAGCTATGTATTTCAATCTTCGCACTGAACTGGTCATCTTGTTAAA
AATATCGGTTATTAGTTAGTAGCCTAGCTCTTGTGGGgagaaaagttttc
caaattttactttTATGCAACTTGGCACAAATGTTGTTGTTGTGTTATAT
GAAATCCAAATGTTTTTGTTTAGTTGTTACATAATGGTATCAAtctcttt
tatctttcttttAAGGTGACCTTAATTCAGAGATCACCACTAGGGCAAAA
CAAGAAATCAAAACTTACACAAGACTAGACCCTTGGAAGGTAGGCTTTTT
TTTGAAAGGGAGAAaccagtttttttttcatattcggATATTGTCATAGA
GAGTTTGATTCATAAAAGAAGTCGTAGTTACACCGTGATTAACAATATTG
TCACAATTAGAAATTAAACCCAAACTAGCGTCATgaatttgcataaaaaa
gttttcatcTTGTATTCACCCCCCCCCCAATGATTCGTTATGTAGTTTAG
ATGTTAAAAATTGTTGTTACTGGGCTAACACTTCACCTAATTATTTTATC
CCCCTTATGATTCTCAGTGCAAATTTTTAATCCTGTCGTTTTTTTACAGG
TCAAATATTTTGAACCAGTTTACGGACAATCGTAAGTATAATAATCCTAT
TTGAAAAGTAGTATCCAATATTTGTTTAAGTTAGCTCTCCAAAACAAGTG
GCCGTCGAAAAagtacttgaaaaatatttgatccGATGATCCAAAAAAGC
TTAAGTTATTCACTCCTCTTTTTTATTCGGGCATTTCGGTCACTCAAAGA
TTATTGTGTCATAATTGCAATAAAGTTATTATTATCCTCGTTTACCTGGT
CATTGTTTATCACATACCACCTTTTAAGCTTTGTAAAgtgaaattcattt
cattttcgaAGTCTACGAAAAGTTTTACAGTTTCTTATTAGATCAGCGAG
CACTGAGATTCTCACTTAACTTATCTATCATTTTTAACATTTATTAGCTG
CGAAATTTATAGCAATGAAGTTTATTTTGATGACCACCTTTACAGCTCTG
TCAAAGAAGACATTCCAGAAGATGAACGACCTCACGATAACATCAAACCG
ATACAATCTTCCTGGGTTCCTTTCCTCAAATTCGCTGAAAATTCTACTGG
TGAATACGAGAGATCATTGTCCAAAATTCAGGTATTCATATATTCATATT
AATGATAAGGATGTATTTACTTTGTGCTCAAAAACTCGActtttcttttg
tgttttggtGGCAGTTTAATAAGAGTCCTGCTTTGAAGGTGAGTGCTGGA
GCCTCACCCACAAGTCGGTCCAGAAGATGCATGCAAGTTTACTGttataa
aaatagatttcgGGGTAAATATATTTCCTTGAATTACAGGAAACTCAAAC
GTCGTAAATTGCCTAGAAAGCACAATGGAAGCTCATTCATATTTGATAgc
ctaattttcatttttcaggctGTCTTCCTCTGTAATCTCTGAATTTTGAC
CCATTTGACCCAGATTATAGATAACTTTAACGCCAATCAAGTTTCTTGGT
CTTTGCAGATCTCTACTCTATTTGGAAAAGTTTCATGGTCATATAAGATT
AAAAAGATCTCAAGTGAAGCAAGGAATATATTGATATATCTACACATACG
TTTTAACACTTCTGCCCAATTGAAATAAAGCTATAGTTATGGTTTGTCTA
ATGCTATCATTACgattttctaaaatcatggTTTAGATTTTTAAGGCTAG
AATCGAgctaaaatagattttaaatgtTGCTTTTTTGATCGTACTTTTTT
CAGGCACAAGTGAAAGAAACGAGGGAGAGAGAAGCCAGAGAGAAAGAAGA
AGCGGACCGTCAACGAAAAGAAGAACTCTCTCAGCGTTCAAACCTTCTGT
CGGCTCCCACTTCATCCTCGTCGTCCGCTACTCCCAACAAACTCAACAAA
ACGCCTTTCCGATGTGCTCCACTACGTCACCAATCGTCTCTAACACGGTC
ACCGCATGCTCGTTCGCCAATGACGACGCGGCCGCCCACCAACCGTCTCT
CATCAGTAGAATCGAGTAAAGAGAAAAGTAAACGGGCGTTAAAGCGTGCA
CAATTATTGCAACGTAAGAAAATCTTCGATAAACAGTTAAAAGACGCGAA
AGCACGGATATTAGAGGACGCACGATCGAACAGTGTGATAAAAGAAAATC
GCAAACAATTTCTAACACGATCAGCTTCATCTTCATCAGAAACGGAAAAA
AACTTAACCACTGTAACCTCGTCAAGTCCTTCAAAAATTCTACCAACCGC
TATCAAGAAAGATAAAGATCTAACAAAACTTTGTATCGTATCGTCTTCGT
CTACAACGTCTCTATCATCGTCCTCTCCTTCCTCAACTAACATCAATACA
ACAAACAACTCTTCTTTGACAACAACGACCACAATTAATCCTTTGTTGCA
AAAATTCATACACGACAGCGAAACAGCTGTTGCGGAATCATCGTCACAAT
ATGTTGCGCAATCCTCTACAACAACAGAAACTACCTCGACAGACTTAATG
TCAAATACAACGTCTACAACCCTAGCATTGGCGACTCCGAACAACACTTT
AACGACAACCAGTACGACTACTTGCAATCATAAGAAAACCGATACTACGA
TCATTAAAACAGCATCGAACAGTAAAATTATTCAAGGTGCCGCTAATTTT
GGAACGAATTCAAATGGTTCATGCCCTTGTAACGTCAAAGCTATGTTTCT
TTGTAAACGTTGTGGCTCAGCGTGGCACGGGGATTGTATAAATAGTGACA
AAATTTGCATTTCTTGCTCATAGAGTTTATCCTGTTTGgtctgttatttc
tattttctagCACTGCTgtatttcaaattattatttttttcagattttga
aatTCTCTTCAATCTCTtttatatatactttttttcCCAGTCACCGTTTA
TTATTATAATAGTATATATAATAATTCATTCGTTTTTAAAAATCTCGTTG
GTTTTAGAATTGTTGATTTTAGTTCAACtcatacttttatttatttttgt
agaaaaatattTGTTCAGATGTTTCTCTATCCTTCACCGAACTTGGTATA
TTTTTCCCGATAACGGTCTGAAAATGTTAGAGAATTATTCATGAGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043829XLOC_043829Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070363-exon-scaffold_55-1491911889:178443..178555TCONS_00070363-exon-scaffold_55-1491911889:178443..178555Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1510915933:178443..178555TCONS_00070363-exon-scaffold_55-1510915933:178443..178555Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1575043694:178443..178555TCONS_00070363-exon-scaffold_55-1575043694:178443..178555Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1491911889:180300..180548TCONS_00070363-exon-scaffold_55-1491911889:180300..180548Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1510915933:180300..180548TCONS_00070363-exon-scaffold_55-1510915933:180300..180548Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1575043694:180300..180548TCONS_00070363-exon-scaffold_55-1575043694:180300..180548Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1491911889:180856..180886TCONS_00070363-exon-scaffold_55-1491911889:180856..180886Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1510915933:180856..180886TCONS_00070363-exon-scaffold_55-1510915933:180856..180886Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1575043694:180856..180886TCONS_00070363-exon-scaffold_55-1575043694:180856..180886Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1491911889:181053..181117TCONS_00070363-exon-scaffold_55-1491911889:181053..181117Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1510915933:181053..181117TCONS_00070363-exon-scaffold_55-1510915933:181053..181117Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1575043694:181053..181117TCONS_00070363-exon-scaffold_55-1575043694:181053..181117Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1491911889:182899..183008TCONS_00070363-exon-scaffold_55-1491911889:182899..183008Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1510915933:182899..183008TCONS_00070363-exon-scaffold_55-1510915933:182899..183008Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1575043694:182899..183008TCONS_00070363-exon-scaffold_55-1575043694:182899..183008Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1491911889:183295..183368TCONS_00070363-exon-scaffold_55-1491911889:183295..183368Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1510915933:183295..183368TCONS_00070363-exon-scaffold_55-1510915933:183295..183368Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1575043694:183295..183368TCONS_00070363-exon-scaffold_55-1575043694:183295..183368Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1491911889:183658..183731TCONS_00070363-exon-scaffold_55-1491911889:183658..183731Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1510915933:183658..183731TCONS_00070363-exon-scaffold_55-1510915933:183658..183731Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1575043694:183658..183731TCONS_00070363-exon-scaffold_55-1575043694:183658..183731Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1491911889:184042..184073TCONS_00070363-exon-scaffold_55-1491911889:184042..184073Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1510915933:184042..184073TCONS_00070363-exon-scaffold_55-1510915933:184042..184073Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1575043694:184042..184073TCONS_00070363-exon-scaffold_55-1575043694:184042..184073Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1491911889:184488..184623TCONS_00070363-exon-scaffold_55-1491911889:184488..184623Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1510915933:184488..184623TCONS_00070363-exon-scaffold_55-1510915933:184488..184623Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1575043694:184488..184623TCONS_00070363-exon-scaffold_55-1575043694:184488..184623Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1491911889:185246..186589TCONS_00070363-exon-scaffold_55-1491911889:185246..186589Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1510915933:185246..186589TCONS_00070363-exon-scaffold_55-1510915933:185246..186589Clytia hemisphaericaexon
TCONS_00070363-exon-scaffold_55-1575043694:185246..186589TCONS_00070363-exon-scaffold_55-1575043694:185246..186589Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_55supercontigscaffold_55:178443..186589 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.685	12.419	3.18484	2.05454	22.3355	16.3983	4.53048	6.86619	2.21794	4.22386	5.81103	2.49971	3.37881	5.60216	3.78574	4.65976	7.15807	4.01455	1.71563	1.21994	4.72504	4.65134	9.08147	7.68455	12.0802	12.8978	1.2727	1.23257	5.68389	4.41904
Blast
[Close]
BLAST of TCONS_00070363 vs. Swiss-Prot (Human)
Match: ASXL1 (Putative Polycomb group protein ASXL1 OS=Homo sapiens GN=ASXL1 PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 2.694e-25
Identity = 55/128 (42.97%), Postives = 76/128 (59.38%), Query Frame = 3 
Query:  363 FRKFRKGGYVPKQETKIDLMSPDSILSTVQLKDLFNASTFRLLPPAYQYQLLMLLPECDRISNKDGSLRLSSACFNNGFFSRACQEYKDKLMDGDLNSEITTRAKQEIKTYTRLDPWKVKYFEPVYGQ 746
            FRK   G     +  +ID  +P SIL    L+ L N+ TF  LP  +Q QLL LLPE DR    DG LRLSS+  NN FF+ A Q ++++L DG+   E+  R +QE++   +++ WK K+FE  YGQ
Sbjct:  234 FRKPATGQMKRNRGEEIDFETPGSILVNTNLRALINSRTFHALPSHFQQQLLFLLPEVDRQVGTDGLLRLSSSALNNEFFTHAAQSWRERLADGEFTHEMQVRIRQEMEKEKKVEQWKEKFFEDYYGQ 361
The following BLAST results are available for this feature:
BLAST of TCONS_00070363 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASXL12.694e-2542.97Putative Polycomb group protein ASXL1 OS=Homo sapi... [more]
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