TCONS_00070338 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070338
Unique NameTCONS_00070338
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3301

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070338 ID=TCONS_00070338|Name=TCONS_00070338|organism=Clytia hemisphaerica|type=transcript|length=3301bp
TTTGGAATTTGGTTTGAGACGCACGCGTCTTGTATTTTGTTGGAAAACTT
GCAAATATGTTGTTGAATTCGAAAATTATTGCTAAAATGGATATCTCCAG
CATGCAGACATGCGAGCTCTGCCCTGGGAAGATATTTTTATCACAAATGG
AGTTGGATCACCATAAAAGTTCGCATCAAGCAGAAAATGAATCAGTTCGG
AATATTACTTCAACCAAACTGGCACAGCTcaagaaaaccaaaaaaatcCT
TTCAGCTAAGTTCAAAGCAATCAAGAATGAAGTCAGCTTAATGTGTAAGT
GGAATGTTCACGATGAAAAGGCTGTTGGGCTTCTTGAGAAAGAACTGGTT
TCTCTTAAACAACAAATCGATGAGAAAGATACCGTTATAAAACTTTTCAG
TGAAAACCAGGAGAAGTCGGCTACCGATGACCTCGTTTATGAGTTCAAAA
AACGATTAGATACTGAGTATGAAGAACTGATGCGTCGGGCCATAAAGCGT
GACCAACCTCAAACATCTTCATCAAACTTATCTATATCTGCTGGACCTTC
AAAGGAACATTCATCTTCAAACTGCACATGTGCTACAGCTGAAACCAATC
TTGAAAAGTTTTCTGAGGAGGTTTCagaactaaaagaaaaaaaaNCAAAG
GAACATTCATCTTCAAACTGCACATGTGCTACAGCTGAAACCAATCTTGA
AAAGTTTTCTGAGGAGGTTTCagaactaaaagaaaaactctcCGAATACA
CTGCCATGGTTCAAGACATGACTCTGAAAAATCAAGAGGTTGAAGGTGAT
CTTGCACAGGCCGTGGAAGCTCTCGAATCATCAAATATAACAATCCGACA
TATGATACAGGATAAGGAAAAGATCGAAGCCAGACTCCGCGCAAACGAAG
AAAAGATCAAAGAACAATACAAGCTTATTCAGGATCACGAAAAACGATCT
CCCTCGGTCGAGATTCAAGAAAAAATCGCTTTGCTTCATGAGCAATTGAC
GGCAACAGATGAAGAGTTAGTTCATCTGATGGATTGTGTCGATGAAAAAG
AATGCGATCTAGCGCATGCGCATAGTGAACAAAAATTGATGGAAAATGAA
AACGTTATCCTCACACAACTCATTGACGAGCTTAGGGAAGAACAAAAAGA
AATGTGCTTACAATGGGAAGATGAAATGAAAGAACTCTTATCCAAGCAGC
GATCACTGGAACAAGAAAATCAATCCTTTCTTTGCAAACTGGCCGATTAT
GAGGTTGCAAGTAAAGACCAGACAGTTAAGATCGATCAATTGACGTTGTA
TGTTGAGGAGCTAGAAAGGCAGAAGGCTCAAGACAAGGAACAAATTGTGC
TTCTGACTGCTGAACGAGATGAGTTCAAGCTAAATTTAATTTCCCTTCAA
CAAACACATGAAAAATGTATCGCAGAGAAACAGGAATTGATAGCTTCAAG
TGAAAAATCTGTAGAGGATATGCGTCTCAAGATGCAAAAATATTTAGatg
atgaaaaagaaacatCACAAGAGCTTCAAGCAAACCTTGAAGAACAGCTC
AAGGAGTTACGGCGTAAACATAGGACTGAAATCTCAAAGTACGATGGCGA
GAggttaaatcttcaaaacacCATTGAAGATCTTGAGAAAGAGATTAACA
TCGCAAAGGCTCTACCAAAAGTTGATACTGGAAAAGTCAAAAGCTTGGAA
AAAGACTTGTCGGACGCAAACTTTCAACTATCGAACAAAGCAGAGCTTGA
GTATACAGTAGAGGAACTCAAAAAGGATCTAAACTCTATTCAAAAGTCAT
TAGATGTTGCCAACAGTCGGAAAGATTCTTTTCGAAAGGAAATTAGTGAA
CTAAAAGAGTTGCTGGACACAGAAATAGGGAAGACGAGTGACTTCAGGCG
TCAAAGAGACCTTGCCGAGAAAAAGTTTAACAATCGTCAACAGCAACTCG
CCAGAGCTGAAGAAGATGTTGCCACTATTAAAACTCAACTTGTAGGTTTA
AAGAAACAGCTAGCCTTAAAAGACACTGAACATCAAAGAGAGAGAGAACG
ATTGATGGTTCAGATTAACGATTTGCAAATAGAGAAGGATCATGCTCAAA
AAAGTGTCTGTGAAAATCAGAAGTTACAGTCAGATATTGCAAAGATTACC
TCGGAGAATGAAACGCTCTCTATTAAAGTTTCAAACAAGAACAAGTCCGA
AAAGAATCTTACTGATGAAATCAAATGTTTAACTAAAAAAGTCCAACGGT
TAGATGTTGTCTCAGCGGGCAACGAGAAGCTTACATCACAAAACGAAGCG
TTATGCGCAGAAATCTCAAATATGAAAGAACTAGAGAAGAGCCACGTGGA
GGAAATTCAATCCCTCACAATTAAAATcaatgatttggaaaaacttCAGC
AATCTGCACCTTCGAAAGACAAGCTTCTCCACTTAGAGGAAGAGCTCGCT
AGTGCCAAGGAACAACAAGAAGAGATTATCTTCACAAATGATAAGATCAA
AAAGCAATACAACGCTGCTAAAAATAAATTAGCCACAAGTCTTGACGAAA
CCGAACATCTCAAGGAAAAATCACTGCAGGCAGAAAAGCTAACAAAAGAC
ACAGAGCTGTTACTTgagaaaaaacacaaagaacTGGAAGCGAAAACTAC
AAAACTACAGAAACAAGACCGAGAAATTTCACAATTTCTCGATCAACGCT
CTGACTTGAAAAGCAAGATTACAAAAGTGGTAAAAAACAGTGAAAAGCTC
AAAATGGCGAAAGAGTTGGCGGAGCAGAAATTAAAGGAGGAGAAGATAAG
AACAACAGAATTGGGAGAAATAGTAAATGAGCTTCGAGACAAAGACCATA
AAGCTACCGAAGCTCTACTTTTCGAAGAGCAACGAAAGAGGTCAGACCTC
GAAGAGATCATCGATCAAATGAAACTAAAAGAACATCAAACTCATAAAGA
ACTTACGAGTGAAAAACAAAAGACATCCAAACTTGAGCAAATGGTTATTC
AAATGAAAGCTGAAATGGAAGCTATCAAGATGGCAAACCAGTCGTCAAAA
GCTGACGAATTTTCCCAGAGAACGGAAGAAACAGTTGAACAACCAATACC
ACTTTTTCCAGCTAAAAGTGAAACATCTGGTAAACAACAAACTCgtattg
tcaatgatgatttTTCCGACGGAGTTTCTGCATGTTCgtctgaagaagaa
gaaatcacACCAACCGCTTCACAAATCTCTTTAAGTGGTGAAATACCGGA
ACAAGCTGATCGTGATGAAAGCATCATCGATGATGATGAACAACGCCAAC
C
Run BLAST on NCBI

transcript from alignment at scaffold_54:85249..96847+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070338 ID=TCONS_00070338|Name=TCONS_00070338|organism=Clytia hemisphaerica|type=transcript|length=11599bp|location=Sequence derived from alignment at scaffold_54:85249..96847+ (Clytia hemisphaerica)
TTTGGAATTTGGTTTGAGACGCACGCGTCTTGTATTTTGTTGGAAAACTT
GCAAATATGTTGTTGAATTCGAAAATTATTGCTAAAATGGATATCTCCAG
CATGCAGACATGCGAGCTCTGCCCTGGGAAGATATTTTTATCACAAATGG
AGTTGGATCACCATAAAAGTTCGCATCAAGCAGAAAATGAATCAGTTCGG
AATATTACTTCAACCAAACTGGCACAGCTcaagaaaaccaaaaaaatcCT
TTCAGCTAAGTTCAAAGCAATCAAGAATGAAGTCAGCTTAATGTGTAAGT
GGAATGTTCACGATGAAAAGGCTGTTGGGCTTCTTGAGAAAGAACTGGTT
TCTCTTAAACAACAAATCGATGAGAAAGATACCGTTATAAAACTTTTCAG
TGAAAACCAGGAGAAGTCGGCTACCGATGACCTCGTTTATGGTAAGAATG
TTTTCGAATTCGCTCACGTTCCACAATTAAATCTatagaaattttgataa
agtcatcttataaaaattataattggtcagccccggtgacccttcaaatc
ggtTCCGCGATTTTTTTTCCAGCAGCAGCATCCGCAGCGCATTTGGACTT
ATTTTTTaaatccgatttcggattattttcggaaaacaagttatcggtaa
aactttggcgcgaaaaatattttctattNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNACCTCTTTGACTTTAACAACgaattagg
tttcttgattgtacttccttctaatcgttttaagcttattgggctgacct
tccagcgcagctggtttattatacAACTCAATCAAGACAATATAACATAC
AGTTACCTAAAAAAACTTTCGACAGTTTACCCTGTCAGCCCTATAACTCA
CTCAGAGCAAAACTATTACTAAATTTAGCTTATAAACATAAGTGCCTCAA
CTATACAAGGACTTTCGATTCcgaattgaagattttttctccATTCAGAG
AGGATCCTATAAAATAACTTGTATTTTTGATTCTTTATAGAGTTCAAAAA
ACGATTAGATACTGAGTATGAAGAACTGATGCGTCGGGCCATAAAGCGTG
ACCAACCTCAAACATCTTCATCAAACTTATCTATATCTGCTGGACCTTCA
AAGGAACATTCATCTTCAAACTGCACATGTGCTACAGCTGAAACCAATCT
TGAAAAGTTTTCTGAGGAGGTTTCagaactaaaagaaaaaaaaNCAAAGG
AACATTCATCTTCAAACTGCACATGTGCTACAGCTGAAACCAATCTTGAA
AAGTTTTCTGAGGAGGTTTCagaactaaaagaaaaactctcCGAATACAC
TGCCATGGTTCAAGACATGACTCTGAAAAATCAAGAGGTTGAAGGTGATC
TTGCACAGGCCGTGGAAGCTCTCGAATCATCAAATATAACAATCCGACAT
ATGATACAGGATAAGGAAAAGATCGAAGCCAGACTCCGCGCAAACGAAGA
AAAGATCAAAGAACAATACAAGCTTATTCAGGATCACGAAAAACGATCTC
CCTCGGTCGAGATTCAAGAAAAAATCGCTTTGCTTCATGAGCAATTGACG
GCAACAGATGAAGAGTTAGTTCATCTGATGGATTGTGTCGATGAAAAAGA
ATGCGATCTAGCGCATGCGCATAGTGAACAAAAATTGATGGAAAATGAAA
ACGTTATCCTCACACAACTCATTGACGAGCTTAGGGAAGAACAAAAAGAA
ATGTGCTTACAATGGGAAGATGAAATGAAAGAACTCTTATCCAAGCAGCG
ATCACTGGAACAAGAAAATCAATCCTTTCTTTGCAAACTGGCCGATTATG
AGGTTGCAAGTAAAGACCAGACAGTTAAGATCGATCAATTGACGTTGTAT
GTTGAGGAGCTAGAAAGGCAGAAGGCTCAAGACAAGGAACAAATTGTGCT
TCTGACTGCTGAACGAGATGAGTTCAAGCTAAATTTAATTTCCCTTCAAC
AAACACATGAAAAATGTATCGCAGAGAAACAGGAATTGATAGCTTCAAGT
GAAAAATCTGTAGAGGATATGCGTCTCAAGATGCAAAAATATTTAGatga
tgaaaaagaaacatCACAAGAGCTTCAAGCAAACCTTGAAGAACAGCTCA
AGGAGTTACGGCGTAAACATAGGACTGAAATCTCAAAGTACGATGGCGAG
AggttaaatcttcaaaacacCATTGAAGATCTTGAGAAAGAGATTAACAT
CGCAAAGGCTCTACCAAAAGTTGATACTGGAAAAGTCAAAAGCTTGGAAA
AAGACTTGTCGGACGCAAACTTTCAACTATCGAACAAAGCAGAGCTTGAG
TATACAGTAGAGGAACTCAAAAAGGATCTAAACTCTATTCAAAAGTCATT
AGATGTTGCCAACAGTCGGAAAGATTCTTTTCGAAAGGAAATTAGTGAAC
TAAAAGAGTTGCTGGACACAGAAATAGGGAAGACGAGTGACTTCAGGCGT
CAAAGAGACCTTGCCGAGAAAAAGTTTAACAATCGTCAACAGCAACTCGC
CAGAGCTGAAGAAGATGTTGCCACTATTAAAACTCAACTTGTAGGTTTAA
AGAAACAGCTAGCCTTAAAAGACACTGAACATCAAAGAGAGAGAGAACGA
TTGATGGTTCAGATTAACGATTTGCAAATAGAGAAGGATCATGCTCAAAA
AAGTGTCTGTGAAAATCAGAAGTTACAGTCAGATATTGCAAAGATTACCT
CGGAGAATGAAACGCTCTCTATTAAAGTTTCAAACAAGAACAAGTCCGAA
AAGAATCTTACTGATGAAATCAAATGTTTAACTAAAAAAGTCCAACGGTT
AGATGTTGTCTCAGCGGGCAACGAGAAGCTTACATCACAAAACGAAGCGT
TATGCGCAGAAATCTCAAATATGAAAGAACTAGAGAAGAGCCACGTGGAG
GAAATTCAATCCCTCACAATTAAAATcaatgatttggaaaaacttCAGCA
ATCTGCACCTTCGAAAGACAAGCTTCTCCACTTAGAGGAAGAGCTCGCTA
GTGCCAAGGAACAACAAGAAGAGATTATCTTCACAAATGATAAGATCAAA
AAGCAATACAACGCTGCTAAAAATAAATTAGCCACAAGTCTTGACGAAAC
CGAACATCTCAAGGAAAAATCACTGCAGGCAGAAAAGCTAACAAAAGACA
CAGAGCTGTTACTTgagaaaaaacacaaagaacTGGAAGCGAAAACTACA
AAACTACAGAAACAAGACCGAGAAATTTCACAATTTCTCGATCAACGCTC
TGACTTGAAAAGCAAGATTACAAAAGTGGTAAAAAACAGTGAAAAGCTCA
AAATGGCGAAAGAGTTGGCGGAGCAGAAATTAAAGGAGGAGAAGATAAGA
ACAACAGAATTGGGAGAAATAGTAAATGAGCTTCGAGACAAAGACCATAA
AGCTACCGAAGCTCTACTTTTCGAAGAGCAACGAAAGAGGTCAGACCTCG
AAGAGATCATCGATCAAATGAAACTAAAAGAACATCAAACTCATAAAGAA
CTTACGAGTGAAAAACAAAAGACATCCAAACTTGAGCAAATGGTTATTCA
AATGAAAGCTGAAATGGAAGCTATCAAGATGGCAAACCAGTCGTCAAAAG
CTGACGAATTTTCCCAGAGAACGGAAGAAACAGTTGAACAACCAATACCA
CTTTTTCCAGCTAAAAGTGAAACATCTGGTAAACAACAAACTCgtattgt
caatgatgatttTTCCGACGGAGTTTCTGCATGTTCgtctgaagaagaag
aaatcacACCAACCGCTTCACAAATCTCTTTAAGTGGTGAAATACCGGAA
CAAGCTGATCGTGATGAAAGGTAAGGTTTCCTAAACACCATCCTGCTCAA
NAGCATGTTCgtctgaagaagaagaagaaatcacACCAACCGCTTCACAA
ATCTCTTTAAGCAGTGAAATACCGGAACAAGCTGATCGTCATGAAAGGTA
AGGTTTCCTAAACACCATCCTGCTCAATTTACTTTGTGTTCAGCCTTTTA
TAGATTTTTGGAGAAACCTACCAAAAGAAAGTGATAGAccttcacgattt
ttttctagTCACGGAAACTGTATATCCCAGTGTGAGCTCAATATTGGAAA
GTGTACTAATTAAAGTATGAATTTANTAGTCACGGAAACTGTATATCCCA
GTGTGAGCTCAATATTCGAAAGTGTACTAATTAAAGtatgaatttaattt
tttttgatcttCAGCATCATCGATGATGATGAACAACGCCAACCTCAACA
AGTATCTGAAAACGTAGATTTCTATTCGTCAGATGACGATCTCAATACAG
CTCTCCTCAGGTAGGTCATTTTTATAGCTTTTTAACGATATTTCTTTCAA
AATAATTGTCTTCGAAGAATTTGTAAAAAGAAATTCCTTGTGCGACCTCT
TTACGGTTAATATCGTGCTTTAAAAAAAATCCTTATCGTACAATGAGTAA
AGCAAGCAATTTCCTTTGTTTTCTTTTTCAGAAAAGAGACGGTTGTATTC
CGCACATCGCCATCGATGTCATCCAACGACGATGAACATGATATTGAAAT
CCCTAAACGCCAATTGAGCGAAAAAATCATCAATGGATTTGAAAAGTTCC
ATAACGAGGATTTCGGTGACTTATCTGGAAAATATGTGAAAGTCATTTCT
GAGAAGCCATCACTAGATGCTTCAGTTACTCACAACCATGCATCCTTGCC
TGACTTAGTCTTAAATAACTCGGTTAACTCCAGTGATTCCGATGTTTCAC
TGAAGGCTGATTCTTCATCATCGGAAAGCCTCCTATCAAGTGGATCAAGC
TCTTCAGAATCCATCAACAAACCATCCAACGCCTCCAAAAGAAACAAGAA
GAAAAACAAGAAGGGTAAAAAAATCACCAACAAACACATGCCCATCTACT
TCTCAAACAAACTGTCATCAGGAGCATCACAAAAAGGCGAAGCATATTCC
AACTATAAAATGCTCGATGATAAATCGAATGGTAACCGAAAATTAAAATC
TTCCAACACTGGAGCCAAAACTCAACCAATAGCCAACAAAGGAGCCAATA
TCAGGAGATTATCAGCTGTTTTCTCCAAAGAAACCATCCCACCATTTGTA
ACGAATAAGTGCCTTCCAGAGCCATCCAAAATCTCAAGcatcaaagaaaa
atttgagaacCTTGGCTGCCGTGATTAATccaaacaaattatttttttca
taattNAAACCATCCCACCATTTGTAACGAATAAGTGCCTTCCAGAGCCA
TCCAAAATCTCAAGcatcaaagaaaaatttgagaacCTTGGCTGCCGTGA
TTAATccaaacaaattatttttttcataattaaattttttaccaaagttt
ttttttcgcaGATTTTTTcccataaattatttttctctcaTACTGATAtt
tgtaattttaatttttcataaatatatTTTAGCCCGTAAAGAAACTCGAA
CACttaatttcattgtttcttCTCCCTCGAAGGTGAGAATTTTAAATCGT
AGGTCCAAAAGTGTCCTTTAGTTTTGCAGGACAAGTTTTGATTTGTCCAG
ACAGTTTTTAAATTGAAGTGAGTAATAGGAGAAAAAAATTCTGCAATCTT
CCAGTAGAGAGTAAGCAATAAAGAAGAAATGTTATAAAAGTATTTATCAC
ATATACTGCCCTTCTACGATGGGCAAAGAAGAAGAAGCATTTCGAAGAGC
GGAAAAATAGCCATTTAGGGACCAATATCTCAAATGTAAGAAATTTTAGA
TCACGCGGCAtctaatcgatgacgtcatcagatggCAATTGCATCAACAT
TGATGTAGAGGACTTGTCAGCTGGTATAGAACAATATCTATACTATAACA
TATTCAAACTCACAGGGGGggttaaccctttaactgcgtGGCATTTTTTA
CAccctcgacctatttgccaatgccggcatatgccgacatgagaaaaaag
tagcgattttcacttcattttctgaatcaTATATGAAGTATtagccaagg
actataattttgagttgaacgtTGTAGAATAGTTGTTTTCAACAGTTTTT
aactattcatttttttcacttcaaacCATCAAAtggaaaaatcttgtaaa
aaatgataaattttcggcaaataggtcgaaatttcgcatgtcggcaaatc
ccgacaatGGCAAGGAAATCaagcacggaaagggttaaatagattttctg
aaaaaactcTCTCCAATTCGAGTGAGTgaatagaaaattgaaaaaaagtt
ccgGAAACTTTGATGACATAAATTTGCGCCACCACCATATTATTCATTCG
CCAAATTTCTCGGGTTTggctggaatttaatttcgcaaataaTTACTTAT
ACAATAGAAATCTTTCCTGGTTTTCTTATATAGTGAAGAGTGaaagtatt
ttgttttttgcttgttttactttttcaaaagaatattGACACATGTTCTA
TGAATACAAATAAtcttacaattaaaaaaaaatcgcgaattttgtGATCT
CAGCGTTTTTACAtatcgaaataaaaaaagaaatttagctTTTCATCGAT
TTTACTGAGTCTCATAGTTCGCGCATGATTTTTTCACCGTCTTTTTTCAT
TGCTTGTATGACCCACTAGGTTGCGCGCTATTTCGACAGGATTGCGCTTC
agttttctttcactttattTATTTGTGTCGTGATTcttaagtttttcaat
tttgacttcTATTTCCTATCTCTAAATATTTCAAGAACTTTAAGTATCGT
GACGTTATAATTTAATATTCAAATACtagattttttaaatacatagtttt
tcaaaaaaaaactacttgccaaatttaaaaattgacgtaacaataaaaaa
actgacgtcaaataaaaaatcttcctttcaaaaagaaagccttccaaaaa
taaaatttaaaagttttgaaaattagtATTAGACGCACGCGTCTTGTATT
TTGTTGTAGAGAAACTTGCAAATATgttattaaattcaaaaaatattgct
cAAATGGATATGTCCAGCATGCAGACATGCGAGCTCTGCCCTGAGAAGAT
ATTTTTATCACAAATGGAGTTGGATCACCATAAAAGTTCGCATCAAACAG
AAAATATGTCAGTTCGGAACATTACTTCTACCAAACTGGCACAGCTGAAG
AAAACCAAGAAAATCCTTTCAGCTAAGTTCAAATCAATCAAGAACGAAGT
TAGCTTAATGTGTAAGTGGAATGTTCACGATGAAAACGTTGTTGaacttc
ttgaaaaagaaatggtTTCTCTCAAGCAACAAATTGATGAGAAAGATGCC
GTTATAAAACTTTTCAGTGACAACCAGGAGAAGTCGGCTACCAATGACCT
CGTTTACGGTAAGAATGTTTTCGATCTCGCTCATTCCAGAATTTTGATAT
GGTCCtcttataaaattataattATACAACTCAACAAAGGCAACATAAGT
TACCTAAAATTTCTTTCAACGAATTACCCTGTTTTCCCGAAACTCACTCT
AAGCAAAACTACTAACTACATTTTGTCGTAATATCTTCGATATGTGAGGT
TAGGATACATTTTCTTAGGCCCTTTCCTTGTAGACTTTCTTGCCTTACTT
TATTATTTTAACAACTAAATATGGTTATGATGTATTTCATGTTGTGCTAT
TTTAATTTCTAACTTCCATAAATCCAAGTCACCGGTCAGAGAAGatccta
attttttatttttgattttttatagaGTTCAAAAAGCGATTAGATGCTGA
GTATGAGGAACTGATTCACCAGGCCTTAAAGCCTGATCAACCtcaaaaat
cttcatcaaacttATCTATAACAGCTGGACCTTCCAAGGAACATTCATCT
TCAAACTGCACATGTGCTACAGCTGAAGCCGATCTTGAAAAGCTTTATGA
GGAAGTTTCagaactaaaagaaaaactctcCGAATCCACTGCTCTGATTC
AAGACATGACTCTGAAAAATCAAGAGCTTGAAGGTGATCTTGCACAGGCC
GTGGAAGCTCTCGAATCATCAAATATAACTATCCGACAAATGATGCAGGA
TAAGGAAAAGATTGAAGCCAGACTCCGCGCAAACGAAGAAAAGATCACAG
AACAATACAAGCTTATTCAGGATCACGAAAAACGATCTCCCTCGGtcgaa
attcaagaaaaaatcgCTTTGCTTCATGAGCAATTGACGGCAACAGATGA
AGAGTTAGTTCATCTGATGGGGTGTGTCGATGAAAAAGAATGCGATCTAG
CGCATGCGCATAGTGAACAAAAATTGATGGAAAATGAAAACGTTATCCTC
ACACAACTCATTGACGAGCTTCGAGAAGAACAAAAAGAAATGTGCTTACA
ATGGGaacatgaaatgaaaaaactctTATCTAAGCAGCGATCACTGGAAC
AAGAGAATCAATCCTTACTTTGCAAGCTGGCCGATTATAGGGTTGCAAGT
AAAGACCAGACAGTTAATATCGATCAATTAACGTTGTATGTTGAGGAGCT
AGAAAGGCAGAAGGATCAAGACAAGGAACAAATTATACTTCTGACTGCTG
AGCGAGATGAGTTCAAGCTAAACTTAATTTCCCTACAACAAACACATGAA
AAATGTATCGCAGAGAAACAAGAATTGATAACTTCAAGTGAAAAATCTGT
AGAGGATATGCGTCTCAAGATGCAAAAATATTTAGatgatgaaaaagaaa
catCACAAGAGCTTCAAGCAAACCTTGAAGAACAGCTCAAGGAGTTACGG
CGTAAACATAAGACTGAAATCTCAAAGTACGATGGCGAGAggttaaatct
tcaaaacacCATTGAAGATCTTGAGAAAGAGATTAACATCGCAAAGGCTC
TACCAAAGGTTGATACTGGAAAAGTCAAAAGCTTGGAAAAAGACTTGTCG
GACGCAAACTTTCAACTATCGAACAAAGCAGAGCTTGAGTATACAGTAGA
GGAACTCAAAAATGATCTAAACTCCATTCAAAGGTCATTAGATGTCGCCA
ACAGTCGGAAAGATTCTTTTCGAAAGGAAGTTAGTGAACTAAAAGAGTTG
CTGGACACAGAAATAGGGAAGACGAGTGACTTCAGGCGTCAAAGAGACCT
TGCCGAGAAAAAGTTTAACAATCGTCAACAGCAACTCGCCAGAGCTGAAG
AAGATGTTGCCAGTATTAAAACTCAACTTGTTGGTTTAAAGAAACAGCTA
GCCTTAAAAGACACTGAACACCAAAGAGAGATAGAACGATTGATGGTTCG
NGCTGAAGAAGATGTTGCCACTATTAAAACTCAACTTGTAGGTTTAAAGA
AACAGCTAGCCTTAAAAGACACTGAACATCAAAGAGAGAGAGAACGATTG
ATGGTTCAGATTAACGATTTGCAAATAGAGAAGGATCATGCTCAAAAAAG
TGTCTGTGAAAATCAGAAGTTACAGTCAGATATTGCAAAGATTACCTCGG
AGAATGAAACGCTCTCTATTGAAGTTTCAAACAAGAACAAGTCCGAAAAG
AATCTTACTGATGAAATCAAATGTTTAACGAAAAAAGTCCAACGGTTGGA
TGTTGTCTCAGCCGGCAACGAAAAGCTTATATCACAAAACGAAGCGTTAT
GCACAGAAATCTCAAATATGAAAGAACTAGAGAAGAGCCACGTGGAGGAA
ATCCNACAGAAATAGGGAAGACGAGTGACTTTAGGCGTCAAAGAGACCTT
GCCGAGAAAAAGTTTAACAATCGTCAACAGCAACTCGCCAGAGCTGAAGA
AGATGTTGCCACTATTAAAACTCAACTTGTAGGTTTAAAGAAACAGCTAG
CCTTAAAAGACACTGAACATCAAAGAGAGAGAGAACGATTGATGGTTCAG
ATTAACGATTTGCAAATAGAGAAGGATCATGCTCAAAAAAGTGTCTGTGA
AAATCAGAAGTTACAGTCAGATATTGCAAAGATTACCTCGGAGAATGAAA
CGCTCTCTATTGAAGTTTCAAACAAGAACAAGTCCGAAAAGAATCTTACT
GATGAAATCAAATGTTTAACTAAAAAAGTCCAACGGTTAGATGTTGTCTC
AGCGGGCAACGAGAAGCTTACATCACAAAACGAAGCGTTATGCGTAGAAA
TCTCAAATATGAAAGAACTAGAGAAGAGCCACGTGGAGGAAATTCAATCC
CTCACAATTAAAATcaatgatttggaaaaacttCAGCAATCTGCACCTTC
GAAAGACAAGCTTCTCCACTTAGAGGAAGAGCTCGCTAGTGCCAAGGAAC
AACAAGAAGAGATTATCTTCACAAATGATAAGATCAAAAAGCAATACAAC
GCTGCTAAAAATAAATTAGCCACAAGTCTTGACGAAACCGAACATCTCAA
GGAAAAATCACTGCAGGCAGAAAAGCTAACAAAAGACACAGAGCTGTTAC
TTgagaaaaaacacaaagaacTGGAAGCGAAAACTACAAAACTACAGAAA
CAAGACCGAGAAATTTCACAATTTCTCGATCAACGCTCTGACTTGAAAAG
CAAGATTACAAAAGTGGTAAAAAACAGTGAAAAGCTCAAAATGGCGAAAG
AGTTGGCGGAGCAGAAATTAAAGGAGGAGAAGATAAGAACAACAGAATTG
GGAGAAATAGTAAATGAGCTTCGAGACAAAGACCATAAAGCTACCGAAGT
TCTACTTTTCGAAGAGCAACGAAAGAGGTCAGACCTCGAAGGGATCATCG
ATCAAATGAAACTAAGAGATCATCAAACTCATAAAGAACTTACGAGTGAA
AAACAAAAGACATCCAAACTTGAGCAAATGGTTATTCAAATGAAAGCTGA
AATGGAAGCTATCAAGATGGCAAACCAGTCGTCAAAAGCTGACGAATTTT
CCCAGAGAACGGAAGAAACAGTTGAACAACCAATACCACTTTTTCCAGCT
AAAAGTGAAACATCTGGTAAACAACAAACTCgtattgtcaatgatgattt
TTCCGACGGAGTTTCTGCATGTTCgtctgaagaagaagaaatcacACCAA
CCGCTTCACAAATCTCTTTAAGTGGTGAAATACCGGAACAAGCTGATCGT
GATGAAAGGTAAGGTTTCCTAAACACCATCCTGCTCAATTTACTTTGTGC
TCTGCCTTTTATAGATTTTTGGAGAAACCTACCAGAAGAAgtatgatttt
aattttttttgatcttCAGCATCATCGATGATGATGAACAACGCCAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043810XLOC_043810Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070338-exon-scaffold_54-1491911889:85249..85689TCONS_00070338-exon-scaffold_54-1491911889:85249..85689Clytia hemisphaericaexon
TCONS_00070338-exon-scaffold_54-1510915933:85249..85689TCONS_00070338-exon-scaffold_54-1510915933:85249..85689Clytia hemisphaericaexon
TCONS_00070338-exon-scaffold_54-1575043694:85249..85689TCONS_00070338-exon-scaffold_54-1575043694:85249..85689Clytia hemisphaericaexon
TCONS_00070338-exon-scaffold_54-1491911889:86639..89468TCONS_00070338-exon-scaffold_54-1491911889:86639..89468Clytia hemisphaericaexon
TCONS_00070338-exon-scaffold_54-1510915933:86639..89468TCONS_00070338-exon-scaffold_54-1510915933:86639..89468Clytia hemisphaericaexon
TCONS_00070338-exon-scaffold_54-1575043694:86639..89468TCONS_00070338-exon-scaffold_54-1575043694:86639..89468Clytia hemisphaericaexon
TCONS_00070338-exon-scaffold_54-1491911889:96818..96847TCONS_00070338-exon-scaffold_54-1491911889:96818..96847Clytia hemisphaericaexon
TCONS_00070338-exon-scaffold_54-1510915933:96818..96847TCONS_00070338-exon-scaffold_54-1510915933:96818..96847Clytia hemisphaericaexon
TCONS_00070338-exon-scaffold_54-1575043694:96818..96847TCONS_00070338-exon-scaffold_54-1575043694:96818..96847Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_54supercontigscaffold_54:85249..96847 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0825298	0.0260066	0	0	0.162839	0	0	0.0430746	0.0682987	0.0457167	0.0443998	0	0.0593485	0.000504042	0.0167454	0.0219012	0.0416704	0.0190771	0	0	0.0563268	0.172151	0.01275	0.0258716	0.0409362	0	0	0.0324222	0.0123293	0.0123553
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070338 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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