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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070334 ID=TCONS_00070334|Name=TCONS_00070334|organism=Clytia hemisphaerica|type=transcript|length=509bp
ATAACACTTCAACAACAAAGTTCAACCATCAGTGCAGCTCCGCGCAAAAT
GGAcgattttacttttaaattctATCGTGCAGCAGCCGGAAGTAACAGAA
CCGAGGTACTTCTGAGGAAAGCAAACGCGACTGCTCAAAGACTCTCATCA
GTATTTAAGATATCGCCAGGGAGTATATTCATTACAGAAGACTATCATGC
GGGTGAATCGGATTTCCCAAGAGAAGACGGTGGGAAGACGGTACATTCTT
ACTATTAGAGACTGCACTACCAGGTACGACCTACAGAGTAGAAGGAAGCG
ATTATCAACAACAGCAAAGAATAAGCATTCCAAATTGCCCTTCATCATTC
AATGCCGCATTCAATAAGCCCTCGACATCTAGCTCAAGCTCAAGCTCAAA
CTCAAACTCAGGGAGATTTGGCGCCTTTCGAAAAAGAAGTTCACCTCCTA
CTGAAGATTTGGTCCAGGTGAAGATCACTTATGCTGAAGCGAGAAATAAT
AAAATCGGT Run BLAST on NCBI transcript from alignment at scaffold_54:20990..21949+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070334 ID=TCONS_00070334|Name=TCONS_00070334|organism=Clytia hemisphaerica|type=transcript|length=960bp|location=Sequence derived from alignment at scaffold_54:20990..21949+ (Clytia hemisphaerica)
ATAACACTTCAACAACAAAGTTCAACCATCAGTGCAGCTCCGCGCAAAAT
GGAcgattttacttttaaattctATCGTGCAGCAGCCGGAAGTAACAGAA
CCGAGGTACTTCTGAGGAAAGCAAACGCGACTGCTCAAAGACTCTCATCA
GTATTTAAGGTAAGAGAAAACTGCTTTGCGTTACATACTTacagtttttg
ttttgaggGTGGGGGTATACAAAAACGTCCATTACAATGAAAACTGTAAT
TTTATTTAGATATCGCCAGGGAGTATATTCATTACAGAAGACTATCATGC
GGGTGAATCGGATTTCCCAAGAGAAGACGGTGGGAAGACGGTACATTCTT
ACTATTAGAGACTGCACTACCAGGTACGACCTACAGAGTAGAAGGAAGCG
ATTATCAACAACAGCAAAGAATAAGCATTCCAAATTGCCCTTCATCATTC
AATGCCGCATTCAATAAGCCCTCGACATCTAGCTCAAGCTCAAGCTCAAA
CTCAAACTCAGGGAGGTAAGAAATTCAATCATCAAAGTTCAAACTATTTG
TTTGGTTAGTTACAGTTTATTTTCTGATTTAGACGGCTAGGGTTATTTCA
AATAATTCAAGAAACTAAAAATACGTCTAATTTCAGTCTTGTATGATCAA
TATAATCAATGTTTTACCGCCCCTAATATTTTGTgtcatttcttttattt
tacgTACGCTTCCGTTCTCTGCCTACATCGTTTAGAGAATATTTTTCGTT
TAATTTTCTAATATAGGAAATTAAATTCGAGCTTTTATGTACTTCACTTT
TTATGTACGTTGCTCGCGATAAAGTTAGTCGCTGAAAAATTAAACACATG
CTTATTTTAAATTTAGATTTGGCGCCTTTCGAAAAAGAAGTTCACCTCCT
ACTGAAGATTTGGTCCAGGTGAAGATCACTTATGCTGAAGCGAGAAATAA
TAAAATCGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070334-exon-scaffold_54-1491911889:20990..21148 | TCONS_00070334-exon-scaffold_54-1491911889:20990..21148 | Clytia hemisphaerica | exon |
| TCONS_00070334-exon-scaffold_54-1510915933:20990..21148 | TCONS_00070334-exon-scaffold_54-1510915933:20990..21148 | Clytia hemisphaerica | exon |
| TCONS_00070334-exon-scaffold_54-1575043694:20990..21148 | TCONS_00070334-exon-scaffold_54-1575043694:20990..21148 | Clytia hemisphaerica | exon |
| TCONS_00070334-exon-scaffold_54-1491911889:21249..21504 | TCONS_00070334-exon-scaffold_54-1491911889:21249..21504 | Clytia hemisphaerica | exon |
| TCONS_00070334-exon-scaffold_54-1510915933:21249..21504 | TCONS_00070334-exon-scaffold_54-1510915933:21249..21504 | Clytia hemisphaerica | exon |
| TCONS_00070334-exon-scaffold_54-1575043694:21249..21504 | TCONS_00070334-exon-scaffold_54-1575043694:21249..21504 | Clytia hemisphaerica | exon |
| TCONS_00070334-exon-scaffold_54-1491911889:21856..21949 | TCONS_00070334-exon-scaffold_54-1491911889:21856..21949 | Clytia hemisphaerica | exon |
| TCONS_00070334-exon-scaffold_54-1510915933:21856..21949 | TCONS_00070334-exon-scaffold_54-1510915933:21856..21949 | Clytia hemisphaerica | exon |
| TCONS_00070334-exon-scaffold_54-1575043694:21856..21949 | TCONS_00070334-exon-scaffold_54-1575043694:21856..21949 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_54 | supercontig | scaffold_54:20990..21949 + |
Blast
The following BLAST results are available for this feature:
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