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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070321 ID=TCONS_00070321|Name=TCONS_00070321|organism=Clytia hemisphaerica|type=transcript|length=1022bp
NAACCTGAGAAAAGCGAATCCGTTAATGCTACAAATGTTAAGGACTTATT
TGATGTTAAATTGACTGTTGAAAAGAAGCACAGAGTCGAATTTTTAGCCG
ATACAGGGAGCAAAGTTAATATTTTGAACTTCAAAACCTTTGACAAACTg
agagagaaaaacaaaaaactgaaattgcaaaaaacaaaCGTGAAAATTAT
CACGTACGCTGCTACGCAATCAACCGTGAAATTGATGGGAGTTGTTAAAT
TactaattgaaaacaaaaagaaatttctttgtGAAGACTTTTACGTCATC
AACACAGAtgcaaaaaacattttgagcGGAAAAACGTGTCTTGAACTGAA
TTTGCTTTCGATAAACATCAATTCTTGTGAAGTGAATAGCTCAAATATTC
CAGAACATTTGCAGCCCATTATACACAAATATAAAGAATCGTTGTTTTCG
GGAaaggtcggtaaaataaaaggGACAAAGGTGAAACTACATATAAATGA
GAGTGTAACCCCCGTCGCAGAGAGAGAACGCAGAATTCCTTTTGCTTTGA
GAGATGAAGTGAAAAGAACTATTGAGGAATGGGAGAAAAATGATATTATT
GAGGACGTTACGTCAGAGCCTACCCCCTGGATAAGTCAAATGGTTATTGT
TCCCCCAACAGATGGGAAGAAATTTAGGGTGTGTGTTGATATGAGAAACG
CAAATGAGGCTATTGAGAGAACTCGTTACCCTACCCCTACGGTTGAAGAT
CTTATTGGGAAATTATCCGGTGCAAAATACTTTACAAAATTAGATATGAA
CATTGCTTTTCATCAACTCGAACTTGACCCTGAATCTCGTTATATTACCG
CTTTTCAAACGGAAGACCGtattaaaagtttcaaaaggcTTTTATTCGGA
CTTAATTCTGCTCCTGAGGAACTTCAGCACATTTTGAGATCTATTTTAGC
CGATATACCCGGAGCTATGAACATGGCCGACGATATACTTGTGTACGGTA
AAACACAAGAGGAACATGACAC Run BLAST on NCBI protein sequence of TCONS_00070321-protein >TCONS_00070321-protein ID=TCONS_00070321-protein|Name=TCONS_00070321-protein|organism=Clytia hemisphaerica|type=polypeptide|length=340bp
XPEKSESVNATNVKDLFDVKLTVEKKHRVEFLADTGSKVNILNFKTFDKL
REKNKKLKLQKTNVKIITYAATQSTVKLMGVVKLLIENKKKFLCEDFYVI
NTDAKNILSGKTCLELNLLSININSCEVNSSNIPEHLQPIIHKYKESLFS
GKVGKIKGTKVKLHINESVTPVAERERRIPFALRDEVKRTIEEWEKNDII
EDVTSEPTPWISQMVIVPPTDGKKFRVCVDMRNANEAIERTRYPTPTVED
LIGKLSGAKYFTKLDMNIAFHQLELDPESRYITAFQTEDRIKSFKRLLFG
LNSAPEELQHILRSILADIPGAMNMADDILVYGKTQEEHD Run BLAST on NCBI transcript from alignment at scaffold_52:204424..205445 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070321 ID=TCONS_00070321|Name=TCONS_00070321|organism=Clytia hemisphaerica|type=transcript|length=1022bp|location=Sequence derived from alignment at scaffold_52:204424..205445 (Clytia hemisphaerica)
GTGTCATGTTCCTCTTGTGTTTTACCGTACACAAGTATATCGTCGGCCAT
GTTCATAGCTCCGGGTATATCGGCTAAAATAGATCTCAAAATGTGCTGAA
GTTCCTCAGGAGCAGAATTAAGTCCGAATAAAAgccttttgaaactttta
ataCGGTCTTCCGTTTGAAAAGCGGTAATATAACGAGATTCAGGGTCAAG
TTCGAGTTGATGAAAAGCAATGTTCATATCTAATTTTGTAAAGTATTTTG
CACCGGATAATTTCCCAATAAGATCTTCAACCGTAGGGGTAGGGTAACGA
GTTCTCTCAATAGCCTCATTTGCGTTTCTCATATCAACACACACCCTAAA
TTTCTTCCCATCTGTTGGGGGAACAATAACCATTTGACTTATCCAGGGGG
TAGGCTCTGACGTAACGTCCTCAATAATATCATTTTTCTCCCATTCCTCA
ATAGTTCTTTTCACTTCATCTCTCAAAGCAAAAGGAATTCTGCGTTCTCT
CTCTGCGACGGGGGTTACACTCTCATTTATATGTAGTTTCACCTTTGTCc
cttttattttaccgaccttTCCCGAAAACAACGATTCTTTATATTTGTGT
ATAATGGGCTGCAAATGTTCTGGAATATTTGAGCTATTCACTTCACAAGA
ATTGATGTTTATCGAAAGCAAATTCAGTTCAAGACACGTTTTTCCgctca
aaatgttttttgcaTCTGTGTTGATGACGTAAAAGTCTTCacaaagaaat
ttctttttgttttcaattagtAATTTAACAACTCCCATCAATTTCACGGT
TGATTGCGTAGCAGCGTACGTGATAATTTTCACGtttgttttttgcaatt
tcagttttttgtttttctctctcAGTTTGTCAAAGGTTTTGAAGTTCAAA
ATATTAACTTTGCTCCCTGTATCGGCTAAAAATTCGACTCTGTGCTTCTT
TTCAACAGTCAATTTAACATCAAATAAGTCCTTAACATTTGTAGCATTAA
CGGATTCGCTTTTCTCAGGTTN Coding sequence (CDS) from alignment at scaffold_52:204424..205445 >TCONS_00070321 ID=TCONS_00070321|Name=TCONS_00070321|organism=Clytia hemisphaerica|type=CDS|length=1020bp|location=Sequence derived from alignment at scaffold_52:204424..205445 (Clytia hemisphaerica)
GTCATGTTCCTCTTGTGTTTTACCGTACACAAGTATATCGTCGGCCATGT
TCATAGCTCCGGGTATATCGGCTAAAATAGATCTCAAAATGTGCTGAAGT
TCCTCAGGAGCAGAATTAAGTCCGAATAAAAgccttttgaaacttttaat
aCGGTCTTCCGTTTGAAAAGCGGTAATATAACGAGATTCAGGGTCAAGTT
CGAGTTGATGAAAAGCAATGTTCATATCTAATTTTGTAAAGTATTTTGCA
CCGGATAATTTCCCAATAAGATCTTCAACCGTAGGGGTAGGGTAACGAGT
TCTCTCAATAGCCTCATTTGCGTTTCTCATATCAACACACACCCTAAATT
TCTTCCCATCTGTTGGGGGAACAATAACCATTTGACTTATCCAGGGGGTA
GGCTCTGACGTAACGTCCTCAATAATATCATTTTTCTCCCATTCCTCAAT
AGTTCTTTTCACTTCATCTCTCAAAGCAAAAGGAATTCTGCGTTCTCTCT
CTGCGACGGGGGTTACACTCTCATTTATATGTAGTTTCACCTTTGTCcct
tttattttaccgaccttTCCCGAAAACAACGATTCTTTATATTTGTGTAT
AATGGGCTGCAAATGTTCTGGAATATTTGAGCTATTCACTTCACAAGAAT
TGATGTTTATCGAAAGCAAATTCAGTTCAAGACACGTTTTTCCgctcaaa
atgttttttgcaTCTGTGTTGATGACGTAAAAGTCTTCacaaagaaattt
ctttttgttttcaattagtAATTTAACAACTCCCATCAATTTCACGGTTG
ATTGCGTAGCAGCGTACGTGATAATTTTCACGtttgttttttgcaatttc
agttttttgtttttctctctcAGTTTGTCAAAGGTTTTGAAGTTCAAAAT
ATTAACTTTGCTCCCTGTATCGGCTAAAAATTCGACTCTGTGCTTCTTTT
CAACAGTCAATTTAACATCAAATAAGTCCTTAACATTTGTAGCATTAACG
GATTCGCTTTTCTCAGGTTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070321-exon-scaffold_52-1491911889:204424..205445 | TCONS_00070321-exon-scaffold_52-1491911889:204424..205445 | Clytia hemisphaerica | exon |
| TCONS_00070321-exon-scaffold_52-1510915933:204424..205445 | TCONS_00070321-exon-scaffold_52-1510915933:204424..205445 | Clytia hemisphaerica | exon |
| TCONS_00070321-exon-scaffold_52-1575043694:204424..205445 | TCONS_00070321-exon-scaffold_52-1575043694:204424..205445 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_52 | supercontig | scaffold_52:204424..205445 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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