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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070315 ID=TCONS_00070315|Name=TCONS_00070315|organism=Clytia hemisphaerica|type=transcript|length=955bp
aatgctTCCAATCCATAAATTACaacaattctttaaaaatatctaataat
aagaaaaataccagaaaaatgtcattaaaaaaacaCTCAAAAGTTACTCT
AATGAACAATGTACAAAATACGAAATTCTAAGgtcgaaaatttaaaaaat
agcaTAAATTAATACCAACTTTTAATGAACAAGTCAAATTACCTACTATG
GGTTTTATTACATATAAAGTTTCTTATAAACATTCAATAGGTGAAATTAG
GTCAATTCTTTGGATTATAATTATCAAGTGATAACTCAAAAACATTACGT
TGTGTCAATTCCAGACAGACTtaagtcaattttttgaaaattgtcttAAG
ACCATACCCCTATTTCAGtattcctattttcaaaaaatggcctTTTAGTC
CATAAAATTTCTATGGGAGAGTGGTGTTTTTTGCAATTCAGAATCTTCCA
TAGCATCAACAATAACATAGACAGACTCAAGTCCTGAACTTAGGGCAGAG
AATCTTGGAAAAAAGCCTTATGTCCcaattttattctttcattGACTATT
CAACTTAAGTCAAGCACAATTGAACAAGACTTTTTAAAGCAGTTTAAGGC
TAGGTTTGAGCTTGGTACTTGTCTAGTATGAAGATTGTGGGTTCAATTCA
ATACAGCCTCGAGTCCAATAAACCGCCATTTTGGAGCCTCTAGAGCAAGC
TATGAAAATGTCTTaatcttataaaagaaatctaTAACAGAACAATAATA
TCCTAAGTATGCTTTTCTGGCATTATTTGTTTTAAAGTTATCAGCAAATG
AAACCTTTAAAGCTGTCTAGAATTTATACAGTGCTTAGGTTATATAAGAT
CAATTTGCACACTACATACAGTATTACATAATTTTGGATACCagaaaaat
gcttaaaaatacaaaattcaaGGAGTTAAATTATTGGTATAATACAACAA
TAATT Run BLAST on NCBI transcript from alignment at scaffold_52:92117..93071 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070315 ID=TCONS_00070315|Name=TCONS_00070315|organism=Clytia hemisphaerica|type=transcript|length=955bp|location=Sequence derived from alignment at scaffold_52:92117..93071 (Clytia hemisphaerica)
AATTATTGTTGTATTATACCAATAATTTAACTCCttgaattttgtatttt
taagcatttttctGGTATCCAAAATTATGTAATACTGTATGTAGTGTGCA
AATTGATCTTATATAACCTAAGCACTGTATAAATTCTAGACAGCTTTAAA
GGTTTCATTTGCTGATAACTTTAAAACAAATAATGCCAGAAAAGCATACT
TAGGATATTATTGTTCTGTTAtagatttcttttataagattAAGACATTT
TCATAGCTTGCTCTAGAGGCTCCAAAATGGCGGTTTATTGGACTCGAGGC
TGTATTGAATTGAACCCACAATCTTCATACTAGACAAGTACCAAGCTCAA
ACCTAGCCTTAAACTGCTTTAAAAAGTCTTGTTCAATTGTGCTTGACTTA
AGTTGAATAGTCaatgaaagaataaaattgGGACATAAGGCTTTTTTCCA
AGATTCTCTGCCCTAAGTTCAGGACTTGAGTCTGTCTATGTTATTGTTGA
TGCTATGGAAGATTCTGAATTGCAAAAAACACCACTCTCCCATAGAAATT
TTATGGACTAAAaggccattttttgaaaataggaataCTGAAATAGGGGT
ATGGTCTTaagacaattttcaaaaaattgacttaAGTCTGTCTGGAATTG
ACACAACGTAATGTTTTTGAGTTATCACTTGATAATTATAATCCAAAGAA
TTGACCTAATTTCACCTATTGAATGTTTATAAGAAACTTTATATGTAATA
AAACCCATAGTAGGTAATTTGACTTGTTCATTAAAAGTTGGTATTAATTT
AtgctattttttaaattttcgacCTTAGAATTTCGTATTTTGTACATTGT
TCATTAGAGTAACTTTTGAGtgtttttttaatgacatttttctggtattt
ttcttattattagatatttttaaagaattgttGTAATTTATGGATTGGAa
gcatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070315-exon-scaffold_52-1491911889:92117..93071 | TCONS_00070315-exon-scaffold_52-1491911889:92117..93071 | Clytia hemisphaerica | exon |
| TCONS_00070315-exon-scaffold_52-1510915933:92117..93071 | TCONS_00070315-exon-scaffold_52-1510915933:92117..93071 | Clytia hemisphaerica | exon |
| TCONS_00070315-exon-scaffold_52-1575043694:92117..93071 | TCONS_00070315-exon-scaffold_52-1575043694:92117..93071 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_52 | supercontig | scaffold_52:92117..93071 . |
Blast
The following BLAST results are available for this feature:
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