TCONS_00070227 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070227
Unique NameTCONS_00070227
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1204

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070227 ID=TCONS_00070227|Name=TCONS_00070227|organism=Clytia hemisphaerica|type=transcript|length=1204bp
AGACTGCTGACCTCAAACAGACAGTCACAGAAATGAATTAAAAGATGGCA
AACTATCCCGGTTCAGGAtttccaaatgattttgatCAGCACCAATTCAT
AACACCATTAGGATTCAGTCAACCACGAATAAGTCCTGTCGTCAATCCAG
AAGAGAAAGGACTTGAAAATCCCCCACCTCTCCCTCAAAGAAACACTCAG
CAACCATATACAAATTTTGCACCATACGGTGGAGGTTACAATAGTTACTA
TGGTGGAGGAAACCCATATCAGAATCATCTATATGGCAATACAGGAGGTA
TGTTCCAAAACTTTGGATCACCCATGTATCAGAACAACAATAGTGTAACA
AGTGGTTTGGAGAATGCGTCACAAAATGCATTTCAATCAGCACAGTCATT
CATTGGTGCATTCAGCTCAATTAGTATGATGCTTGAATCAACTCTCTTCG
CCGTGCAAAATTCTGTCAGAGCTATTGCTGGTGTCGCAGACCAATTTGGT
CATTTGAGACATTACCTTCTGTCATCTGCTGCATCTTTCTACCGCCTTGT
CAATTATTATTACAAGAAAATACTTTGTGTGCTCAGACTGAAACAACCAG
ACACTCAAGATGAAAGGTTTTGGCAAGATGCAATGTCAGGAAGATCAGGG
ACGGAGGAGAGTAGACTTTACGCTTCTTTGCTCTTCTTCTCGTTGGTGAT
TGCAACTCCATGGTTCATTTGGAAACTGTTGAAATCCATCAACTTTCAAC
AAAAGCAAGAAGAAAAGTGGTTCGAAGGTTCAGGAGAGCATTTCGTGGCT
GAAGTTAAATTCCCATTCGTCGCTCGGAGCCGAGATGAAATGAACTTATC
GAAGAACACCATCGTTCGACTTGCACCAAAAGCGCGACAACCAAATATTA
AGGGATGGCTACTGGCATCTGATGGTGAAAACCAAGGTCTTGTTCCTGCC
AATTATATCAAGGTACTTGGGAAGAATCGCAAAGAGAGCACGCTACCAAC
GACACAAACAAAGTCACATGATCTTGTTGATAACAAACCGAACGTTTCAA
ACGATAATTTTAATGATATTTACGAGAACAATGAAGAACCGAATAACACA
GAGAAAGaAATTTGTCAACTTGTTTGGGGCACAATGTATGCGACATGGTA
GAATAtctaagtttttcttttttattgatttgtACTTTCAGACTGAATTT
TTTA
Run BLAST on NCBI

transcript from alignment at scaffold_516:45019..63151-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070227 ID=TCONS_00070227|Name=TCONS_00070227|organism=Clytia hemisphaerica|type=transcript|length=18133bp|location=Sequence derived from alignment at scaffold_516:45019..63151- (Clytia hemisphaerica)
AGACTGCTGACCTCAAACAGACAGTCACGTAATATTATTTTTCTTTATTC
CTATTGTATATAGATTTCCTTTTTTTAGCTATTTAGTAAGTTTCTTTTAA
GCCTATAGACATGCTAGGCCCGGGGGCACTCAAGGTAAATGACCTACCAG
ACGTTCGGCCCTTAAGGGTAGGTTTTTCATAGTTCAGTTAGTGCACTGTA
AGGGTAGGAAATTACAAGACTGCACTGAACTGCACTGTAAGGGTAGGAAA
TTTTGGTAAAAGGCCAATTTTTTGGTAAAATTATCACAAAATTGGTCAAT
TTTGGAGGAAAAATTCCACATTTTCTTGGAAAATTGCAAAAATAATTTCG
CCCTTACGGGCGAGAAATTTTGAAAAAGTGCACTGTAAGGGTCAGCTTGG
TAAAACCCGTGTGTTTTCATCATGAGAAATATCTCGCAAGTCATCAATGA
CGTAAGCAATTAACAAAAGAAAAAAAAGAAAGATCAAAGAGATNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGACAGTCGCTCAAACTCAAAAAGGTC
GGTAGATAAACTGCCGAAGTTACGGTGACAAGAAACAACGCACACTAATT
GATGAGAAGCACAAAAAACAATCTAGATCCCAATATAGATGAGATAATTG
TTTCATACATATAACAATGTAACTTACGTTGTCTCGGACACTTCTTGAGT
GAAAGCAGTCCGCAATGATTGTGATATTGACAAAACGTCTCGCTTCATTT
GATCCGTTTTTCCTGAATAAAAAGAAAGTAAAAACATTATTTGAACTTGA
ACTTTCAAAGTATTGAAATCAACGGATCATCAGTCGCTTTTGTTAGCAGT
GAAGTAAGTAAGTCTATAATCTTTGGGAAGAGAATACGGATATTAATTTG
ATGCAGGGGTGTATTTAGGATTGTTAGGCACCGCTGAATAGTATTCTATA
TGATATAAAAAAGATTGAATGGGTCGGAAATTCTTTCAATGGGCACAATA
CCTTATTAAATTTAAAGAATGAATCTTGTAAAGAAAAAATGAAAGCCCCG
TTCATCTTCATTTTACCCCGTTTTCACTTTAAAGTTGAAATTGGTGTATG
CCTGACGCGTTCTAGCTCATTTGCACAGGGTAGGGAAAAACCCAGGGGGT
ACTTAGGCAAATGGAAGTACGGTATGTGCCACCCTTAAGAGTACCTTTTT
TGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTATGCCAGTTACGATTGATTCGTTTTTTTATACTACTTAATTGAC
AAGGAATTTACGATGTTCTCTACCGTTTTGACTTTCTCGACGTCACAACT
ATGTATAAGTACTTTCGTTTACATAATGAAAACACACGGGTTTTACCAAG
CTGAGGGTATGATTTTTCATGGAAATTCACTGCACTGTAAGGGTCCGATT
TTAGAAGCCAAATTTTGGGCCGAACGTATGGTCGATTTCAGATCGNACAT
CCTTGTTGTTGAAATGTATCCTGTAGATGACTGATGTTGTTTTTTCTGAA
GGCTTTAATTTCCTAGTGTGACTAACTGCAAGAAAACCATATGACCATAT
GGCGCAGGACCCTGCCGACGCACCGGACTTAACGAACACCGGACACACAA
AAGTCCGGTGTAAAATGAGAATTTTTTTTTACCACCTGACAATTTCTACA
CCGGACTTAAGGAAGTCGGATGTCCGGTGTCGGAGAAGGATATATTTTCC
CGCCGGACAATCAAAACACCGGACATGACCAGTCCGGTGGCGTCCGGTGT
TTCTTAATTTTTTGTTTCATAAATGTCCGGCGTCCAAAATTCCCNGCTAG
GTCAAGGTGTAAGTCAGTTATGTTTCAAACACACAGTCAATCAAGACAGT
TAGTCACACTAGCGTCCCATCAAAATGCGTATCAAAGATTAATGCTACGA
AAGCGCTATATCGTTTACTTGACTCTCAAGCAAAAACATGCGCCGCAAAA
CTTCTAAAGGGATTCATGAAAAAATAACCCTGCGCTTTTTAATGAAATTA
ACATTTTCAAAAACTTTGAGAAATTGCCTAAAATTTGAGNNNNNNNNNNN
NNNNNNNTGTTTCTTAATTTTTTGTTTCATAAATGTCCGGCGTCCAAAAT
TCCCTGTATGCAACACCGGACTGACACCGGACTTATTGCGTCCGGTGTAG
CGAAAGGGGTATCAAATTTGGTATTTTTAGACGTTTTTGATACACAGTTT
TTGAAAAAAATCTGAAAAATCTACAAAAGCGCAAATTTTTATAAAAACTA
GTCGTGTGGTAAACAAAAATTACTTTTAAAGGTGTTTTTATTAATTATTA
ATGTCATAAAACTTGTTAAATAAGTCAATTTGTAAGTGATTAATTCTAAT
TGATTGATTTTCCATAAATTTAATACCTCTTTTTTACTTGTTTTTTACAC
TTTCCGAAAAGTGAATTTTGACTTTAAAAGCTCATAAGTAGAGAACAAGT
TGGTCAAATTTAAAAAGTGATAGCTCAAATTNNTTAAATATCAAAACTCC
AAGCACTTTGGGACATTTGTTCGGCCTCAAGGTGTCGGGAAACGTCTGAA
CTTTTTCGTGGGTCACCCGGTATAATATTAATACTATCTTTTTTTGAAAT
TTATTACTTTCTTTTCTTTAACTTATTGCTATCTTTTCGAGGGCTCAGAA
AAGTCGAGTTAAAAAAGTAGAGTTACGAAAAAGTCAAGTTGAGAGCAGTG
CCGTAGCAACCGGGGGGCAAGGGGGGGGGGCAATGTCCCCCCAATAATTT
TTTCAAAAGTGGTTTTCTGGAAAAACCGAATTTAATAATATTTTTTCTTC
CTATATCACAACTATTAAGCTATTTTGATGCGTTTTTAGACCATCTAGAG
GCTCCAATTTTCAAAATCGCCCCGACAATCAACTGACGTTACGCGCGTTT
TATTCTTTTGTTTAATGATATAAAACACTGCAAACGTTTTGCAACGTCAA
AATACATTTTTGACACGGCAGTCAGACCTCCTTTTTAACCCGTCAATTTT
TCTTTAACTTACATTTTCGAGTTGGGAAATTGTAAGATGACGTTAAAATG
GTATGCAGCTTATAACTCGCACTCAAGTTTTTCAACTCAAACTTATTAAC
TCGACTTTTACGAGTATTATATATTTGAAAAGATAGTATTATTTATTAGA
AGAAGATAGTATTATATTAGAAAAGATAGTATTACACTAGAAAAGATAGT
ATTATAAAAACGATAGTATTTTATAGCGCTTTCGTGCGCCATATGACCAT
ATTACTGTGTTGTGAAGTCGATAAATGCTCTAACTTGTGGGACGATTGGT
CGAAACATGGGACTGGTTAATATATGGCCTGTATTTACACTTATTATTAA
ATCTCTTTGACAACAAATTTGTCTTGATAACTCCACCAAGTTTATCAATC
ATACTTCTTCGTTCCTCTTTGACGTTATGAGGGGGTGGGGGGTTTTCAAA
AGTTAGGTTTGACGTTATAAGAAATCAAAGGTGTACCTTTTTGTGAAAAT
CGCGGATACTTGTAACCACCAACCATACTAACCGTAAGTTGGTCTAATAT
CGACATCCCTCGTCTAATTCCGACACCTTTTTTTAGAGACAGGAATAATA
TGAAAGCTTGAATCAGTGATTGAAAAAGATTAATTCCTCTCTGACCATAG
ACATTTTTTCAAAGAGGACGTCCTGTTGAATAATTATGTAGTACAAAAAC
AATGATAGAGCCATGCATAATTATTACTGTATCATGCATATTGTAATAAT
TATGCATGGTTTTATCATTGTTTTTCTGCTGGACTACATAATTATTCAAC
AGGGTGGTGGCCTCTTTGAAAAAAGGTCTATTAAGCAAAGAAAAACAGTT
TCAACCTTTCTATCAATTTCAGCTGATAAAAAGGGTGTCGAAATTAGAGG
AGGGATGTCGACATTAGACCAAGTTACGGTATACTTTATAAGCTTTCGCA
AAACATATTCGTCATTAGTTAAAAGAACACATACACGCACGGGTACAACC
GAGTGTACACAGAATTTGCGACGGAACGGGAAAACTTTGATGAAAAATGG
CTACAACTTTTGGTATACATCAGTACATTGCTTGACGTTATCTGTGGGGG
GTGGGGGGTGTTCAGGGGATAACGTCAATTTGACGTTTTGCGTTGTCAAA
TGAATATGGACGGGTCCCCTTAGTGCTTAGCTAGCTAGGCATAATAGCAG
TGTGTCACAAAGAGCGATATTTCGATCGCACGGAAGCGCTTCAAAACACC
AGCTTTTTTCGAGTTAGATTGGTTCGATTACGATTGTGTTCGATGAGTTT
GATTGTGATTGAAACAAATTGGATCACTCCGTTAGAGCTTTTTAGCGTGG
GCGGCCAAGCGCTTAAGTATCGTACGAAAGCGAATAAAATCTAAATCAAT
TGAACGTAATCAAACATAATCGAATACAATCAAGCGTAATCAAAGCAATC
GAACGGCAAATCCTGGGTAATATTCGATTGTGATTCGATTGGGCTCTTCC
AGTTAAAGTCTGTTATAGAGGGGTGGACAAGAGCTGAATTCCGAGGCAAA
ATGTTTTTTTGAAATTCCTGGATTTCCAATACAAAAGCAATTGAAACTCC
TGGATTTCCGATACAAAATCAATTTTTTGGTGGAAAAATCTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAATT
TCCGAAGCACTTTGAAAAATTGACTGGATTTCCGAGTGCTTTTTTTATCT
GAAAATTCCCGTCATCCACCCCCTATATCAAATTTTTTCTGGTAGAGCCC
ATTGCGTTCATCAATCGAATTGCAATTATTCGATTGTGTTCAATTGCGTT
CGATTGATTCAGTGTTCGATTCGTTCGATTGACACCGTATGGGAAAAAAA
ATCTTCATCATCAATTAATTTTGTTTATAATTGTCAGAATCGTTACTCAC
TGGAAATACACAACTTTCTGAAGTTGCATTTTTTCGGTTGTACTTCATTT
TAAAAATGACGAAGATGAAAAGTTACCATCAATCTCGAGAGTAAAAGAAG
GTATTCCGACTTGTCTACGAAAAGTGCGCTCACGGTCGCGCAGCGAATAG
AATATCTCGCAAATTAATATATGCATAAAACTGACAAAATCCTTTCTTTT
TTATATTTAGGTGACGTCACCATCAACCCTGACTTGACAGTGGAGAACCA
AATTTGGCAATGTATAATTATTACAAGCGGCCGAGAAAGTCTGTGCAACG
TAAAAATTGAGATCGAAAATCAGACGAGAGTAAAAGACGGGGGCGTTTTA
GTATGTAATTAGTAATCCTTTTTTCTATTTGTATTTTTCGCAAATGAAGA
ATAAATTTTTGATTTTTAAATTAAGGAAACATAATGTAATATATTATATT
TGATTGTCAATGCCAAAAGATGTTTCTTTACTTTGCGAATAATTTGCTGT
GTTGCTTCGCCACTTACCCCCAATTGTTTTAGTAGTAGGCACTTTGGTCA
CGTAAATAAAAACACGCGTATATGTTGAACTGTAGACTGACCGAAATTGC
AATTACATAAAATGTTGTGAAAGTGAACGCCTCCATGTTTGGGAAATCAG
CAACGGATTCAGAATAATAGAGGTAGTTATTTTTACAACTCACACTTTTT
TGATCACATTAATTGACATCTTGAAATTATAGTCATCTTGTTAGATATGT
TGTTTTGAGAGTTCTTGCAATAGTTTATTGTTCAACTTGGAGAGGTAATG
TTTGTAAACATAGAATTTTTGTTCATAGCAGTTATTTGGGGGGTCGGATT
TAGGCAGGGCTGTCGAATTTAGGACCACTCACGGTACATATATGATGGTC
GACAAAAATAAACAAACATAAGTTGTAAAAAATTGTACGAGAAGAAAGCT
TAAATCTTTATTAAAAGAATCTTATCTATGGAAAAAATATTTTGTCTGTG
CGTTAAAAAGATAACATTTGGTCAATAGTGTACAAAAATTGCCTGTTTTC
TCCTTGAATCTTGAATTCTGTTTCTTGAAAATACTGCAATTGCAGTAAAA
AACTACTACCGCAATTGTGGGATTTTCTTGGCTGGCTATGCTTCTTCTTG
CTGGAAAACAAGTATTGATGCAAGCTTATGAGGAAAGAACCCCCTGGCTG
CCTGGGAATTTTCAATGACCTTAGGAAGGGCCTGGAAACCTTCAATGATT
GCCCCTTGGAAAATATGAAAAATGAACAAAAACCCCTTGGAAAGTCCAAG
CTCAGGGTGTCTACGGGACCTTGAAAACCTTGAAAACCTTGAGAACCTTG
AAAATGAACCACCCAACCTTGAAAACCTAGAAAACTATCAATTTTCTTGG
AAAAATCTTGAGAACCTTGAAAATCGTTAAAAACATTGAAAAGCACTTCC
TCCTATGCAATATCATGAATGAGAAGAAGTATCATAAATTTTTTCTATAT
AAGGCAGTGGCTAGAATCTAGGTTCTTCTCTAGTATGGCAAAGTAAAGTC
TTCCTACCTAAAAGTACCTCTTTTTGAAAAAAGTTTGCCTGCGGCGCTAC
AAAGCTGCTTTTATAATGGTGGGTCAAAGTCATTGCATTACGGGGGTCGG
ACCAAAACTTCTTTGGAATTTCCTATAAAGAGGGTCTTAATTTTCAAATG
TGTTTCCTAAGGGAGGATACCAATTGAGGGAGTGGTCTTCCTACCTTAGG
GGGGGGGTCTTCCTGCCTAAGGAGGGGTGGTGTTGACCCCTCTAGAAAAC
GGATACGATATCTATCAAAATAATGTATCAAAAGTATGACGAGGTTTGCA
GTGTAACTAACAAAAAAGAGAAATAGAATTTCTGTGGCACTATTTGCTCT
ACAACCGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNAATAACCTACCAAAAGTTTCCCAAAGTG
CACTGTAAGCTGGAGTTTTTACAAGCTCTCGTTTGATTTGGTTGGTCGTT
AACCTGTAATAAAACAATTTTGTTACTTTTTCTAAAGAACTTGTCATCTC
TATTACTTCAAATAACCAATTAGTGAAGTCTCTTGTAAAAACTCCAGCCC
ATCCCAAAATTTTGGTTATTTTGTCTTAAAGAGATCAATAATTGTCAAGA
AAATGCAACATAAGGGTAGATTTTTGCCCAAATTTACTCAAATTCATGAC
TACATCTTTTCTGCACTTTATGGGTTTAACTTTAAAGGCCTTATTTCAGT
CTGTAGGTACAGTCGTTTTTAAGTCTAGTGCTCTTTCCCCGGGCTCGACC
AATAGCACACTTTTTGCCTGACCACATGTTTTATATAAAAACTGGTTCTG
TTTATATCTATTTGCCTTCGAATATTTGTTTTTCACTATGTCTGCTAGTA
AGTATCTTACAAATCTTATCTGAGAGCCGTGCCAACTGATTACCAAAATC
TTTGCCAAAAAACCTTGAAAAACCACTTAAAATGACCCAAAAAACCTTGA
AAACCCCCCAAAAAAATCTGTAGACACCCTGTCCCTGGAAAGGTTAAAAT
TATGGCCCCCATTTCCGACACCCTTTTTTAGAGCTGAAAATAATAGAAAG
GTTAAAACTATTTTTATTTGCTTAGCAGGCTAGCTCTAATGCTCTAAAAC
AGCATCTAATAAATAACATGAAAACCAGGGCAGAAAATGATTCTTCAATG
GTTTAATCAAAACTAAAAAGTGCACTTCTCTGTACCTCTTTGCATCTTTT
GTTCTATCATCTGACCTTTAAAAATGATAAAATTAGCTGCACTGGTTTGT
CTCGTTATACTCTCCTGGTGCTTAATTAATGAGGGGTTGGAATAAACAGT
GGTGCTAAAAATAAAGAGGGTCCCAATAGTTCTTCAGAATACCCAAAAAT
CAGGTGAACAGGTTCAGACTAATTAAAATTAGGCTTTTTAGAACCAGTTA
AGCCTAAAGGACCTTTTAAAAAATCCTTAAAATGTTATCTTTAAAAACAG
GCCTTGATTCTACCACAGACAAAAAAACCCCGCAATTATAGGGCCATTGT
AGTATAGCTCAAAAACATTGTGGCTTTTCATACATTATTTTAAGGAATGT
AACCAACAATTTTAACAATATATTTCGACATTTTTTGTCATCATCAGGTC
TAAAAACAAATAAAATCAGTTTAAAAACAGATTAAAAACAAACAAACTTT
ATACACGATATAATATGTACATACTCTCTCTCCCGTAACTCTCTCTCTAT
ACACATATTGACAAATTAAAAGTAAAACGAATAATGTCGCTTAAAATTGC
AAGCAATCCCAAGGGACATTTCCCGTCATGACACTAATTAAAATTTTATT
ATTAATGTGTGGCTTTTAAATTCATCCTTTGTGTTGAGTGATGGTCTCAG
TTCTTTTATGTACAACGCTTCTTTAATGAGTAATTGTCTTTGATACTTTG
CTCTTGCAAGAATTACGACATCGTTTTCCATCATCCTGAGACCATCACTC
AACACAAAGGATGAATTTAAAAGCCACACATTAATAATAAAATTTTAATT
AGTGTCATGACGGGAAATGTCCCTTGGGATTGCTTGCAATTTTAAGCGAC
ATTATTCGTTTTACTTTTAATTTGTCAATATGTGTATAGAGAGAGTGTTA
CGAGAGAGAGAGTATGTACATATTATATCGTGTATAAAGTTTGTTTGTTT
TTAATCTGTTTTTAAACTGATTTTATTTGTTTTTAGACCTGATGATGACA
AAAAATGTCGAAATATATTGTTAAAATTGTTGGTTACATTCCTTAAAACA
TTGTAGTATAGGGCAATAAATTAATTAAGATATTGTCTTTTTCCTTTAGA
GAAATGAATTAAAAGATGGCAAACTATCCCGGTTCAGGATTTCCAAATGA
TTTTGATCAGCACCAATTCATAACACCATTAGGATTCAGTCAACCACGAA
TAAGGTATTTTTTGATAGTTTGTTCAGAGTGAATAAGGTTGAATTTCCTA
GTTGAATTTTAAATTTAATTGAATCCCAAAAAAATATGGGTACTTGAATG
ATTTCTAATTTTCTAAATATTTTTAGTGTCTGGGAAAGGTAATTAAGTGT
AACATAATAAAAATATGAAAATGGGTTCAATCACCTTTTAAAAATACATC
AAATCACTCCATTTTTCTTGGAAAGTACAAAGAATATAGATACTTTACAT
CCCTTTGAAAATACATTGACTCAAATCGCTTTATTTTCCTTAGAAAATAC
AGAAAATATACTAGAGGAAATTTCGTTTGAAAAATTGCTTTTATTGGGTC
AATATAACAAAAATATTTTATCAATTCTTAAATTTTTACAACCATTCAAA
GTATGCTTGCTGGTCATACTTTATCTAAAACTTTATCTATCTAGGATCAA
GTTCATAGGTGGAATCTCAATTTCCTAGATAAATGAAAAAGAAAAAATTT
TCCTCAGACACAAATATAAAAGTTTTTTGATTTTCTTTGGAAATACAACG
GCCCTATTTTTTCATGCAGAGTTTGTAAAAGTCATTATCTATCTAGTAGG
ATAAAGAACAGTTTTCCTTAAAATGTTGAGAAATATTTTTGCCTAAATTA
TTCAATTTCTCAGTTTTGAAAATATCCATTGATATGAAACTTTGACTTTG
TACAAAGTTTAGTCTCTATTAACTTTTTAAGGTATTTAGTAAACTTTTTT
CTTGTTTAGTCCTGTCGTCAATCCAGAAGAGAAAGGACTTGAAAATCCCC
CACCTCTCCCTCAAAGAAACACTCAGCAACCATATACAAATTTTGCACCA
TACGGTATGTGCTATTCCTGTTTGTTTTAATTTTATACATACATTTACTT
CATTAAGATGCCTGCTTGTTGGACCTACCTGAAGGTCCTATAAATTCACC
TGTGTTCGTTCGTCTGTCCGTTCGCCCATCCGTTTTTTCGTCTGTTACCA
ACCTCTATCATGATTGAATCATAGGAATCTTTTGATTTTTGGTACAAAGG
TGCAAAATGGTGGTGGCCAAAATGTGACGGAGCCCGATTTTTGAAAAAGA
AATCTTTTGGACAAATTTCAGCCAAAAAACAGCTAAAAAAATGTTTTTTA
AGATTTTCATCGGATCATTAATTTTTTCTGATTTTTTGCATGAAAGTAGG
GGAAGCAGATTTTTACAAAAAAAGTTTTTCGGCTCAAAAAATGAATCTTT
ATCTATAAGAATCGCTATTTACAAGAATAGATCAATGTTCTTAGCCATAT
TATCTGATTCGCGAAATTAAATTCCGCGAAAATTTCTTCCCTTAAGGTAA
TTTATATGGTCATGGATCGATCCATAGATTAGACTTTTAATTCCTATAGA
TTTTTCATTTCACTCTTAACTTGAAAGTGAAACAAGGGAATTTGTTTGGA
CACTAAAAATCTTTACTACTATTCTTATTAAGGTGGAGGTTACAATAGTT
ACTATGGTGGAGGAAACCCATATCAGAATCATCTATATGGCAATACAGGA
GGTACGATGTTTTTTGTTATTTTAAATTGTATCCGAGATTAGTTCTTTCA
GTGTGGTTCTTGAGAAGTTGATCGTCAGTTTATGGAAGATTACTGGGCTA
TATGATATTAAAGAGCCCCCTCTCCAGTGGGTTTTGTGATGGCATGATTC
CATTTTTTTCAGCGTGAGTGCGTGATATAGATTATTTCTGTGCGTTCAGG
GGTGCCACTTGGAGGGCCTTGTTATGATTTATTACTTCTTTTAAGTCAAA
AAACTTTCATACTTTAAAATCGTTTTCCTTTTGTAGGTATGTTCCAAAAC
TTTGGATCACCCATGTATCAGAACAACAATAGTGTAACAAGTGGTTTGGA
GAATGCGTCACAAAATGCATTTCAATCAGCACAGTCATTCATTGGTGCAT
TCAGCTCAATTAGTATGATGCTTGAATCAACTCTCTTCGCCGTGCAAAAT
TCTGTCAGAGCTATTGCTGGTATGGATTTCATTTCTTCTTATCATTGAAC
GCTAAAATGTTATTTACTTTGGACTCAAATTGTAAAAGCAAAGAATATTT
TATTAGTTTTTGTTTACTTTGAAACTGCTGGCTTTCACGTTCAGCGCTGT
ATTAGGCCAAAAAAGGAAGGTCCTTTTGGTGAATTTTATTGTTATCCGAA
ATTCTTTTTCTGTCTATTAGGTGTCGCAGACCAATTTGGTCATTTGAGAC
ATTACCTTCTGTCATCTGCTGCATCTTTCTACCGCCTTGTCAATTATTAT
TACAAGAAAATACTTTGTGTGCTCAGACTGAAACAACCAGACACTCAAGA
TGAAAGGTTTTGGCGTAAGTGTGCTTAGCTGATATTTTATGGTTTATTTT
TTGAATTTTCAATAAGACTTTTTTGACAAATTGTTTTGTAGTTGAAAAGA
AAGGGTTTTAACAGTTACTTGATTTGTATTCAAACTCGACGACATACTAA
AGAAATCCACTCAGACAGCTCTCGTTCAATTCCTTTCTTTAAAAGATTAG
GTTGAAGTCGAGGTTTAGGAGGCGGCAGGGGGGGTCATGCAGTTGGTGCC
AGACATCATGATGACAGACATCATGATGACTAACTGCAAAATTGAAAATT
TGGAAGTACACTCACCACCCCTCAGCAGCTAGTACCCAAAAGTACTAAGT
GCTTTTGACTATTGACAGGCTGACATCACCCCTATTCGCACTTGGTACCC
CAAAGTACTAAGTGCGTTTGATTATTGTGTACTAAGTGCATTTGACTATT
GACAGGTCGACACCACCCCTATTCGCACTTATTACCCAAAGTACTAAGTG
TATTTGACTATTGGTAGGTTGACACCACCCCCTTTTTTGCCCTGTTTAGC
GGTCTGGAGTGACCGACACTCAAGGTAATCACTATTGGAAACCAGTTAGT
ACCCTAGGCAGCCCTGGGGTTGATGATTTTTCTCTATTTGATTTATGATA
AATACAAAGCCCAAAACATATTGTACAAAGCTGCAAAACCAAACATGTGA
AGCAAAAAGCCCAAAAATATTCAAAGCCCCAGAAATAAAAACGTCACTTT
TGTATTGTTTGACAAACAACTTAGCGAACATTTTTGCAATGCTAGATTTA
CTGTTAAATAAAAACAAATAAAGCCCTAAAAAAAGCTATTTTCAGCAGTT
ACTACCCTAATAGTACCATTCGATTGACTTAAAATCTATATCACACCACC
TCTCAAAGCATTTAGTACCCTAAAAGTACCATTTGATTGACTTAAAATCT
ATATCACACCACCTCTCAAAGCATTTAGTACCCTAAAAGTACCATTTGAT
TGACTTGAAAATCAAATATGACCCACCACGGTACTAATCGTCATGATGTC
TGGTACCAACTGCATGACACCCCCTGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCGGAGGCGGAGAAACTCGTA
CTTATTATTTTTTAAGAATGCCGGAGAAGCAAATGGTAGAAAGTACGTTA
AGATATGTCTATTAAAGGGTATGGGTTTAAGATATCATTGCATTGCTTTC
TAGAAGATGCAATGTCAGGAAGATCAGGGACGGAGGAGAGTAGACTTTAC
GCTTCTTTGCTCTTCTTCTCGTTGGTGATTGCAACTCCATGGTTCATTTG
GAAACTGTTGAAATCCATCAACTTTCAACAAAAGCAAGAAGAAAAGTGGT
TCGAAGGTAAAAACAGAGTATGACGTAAATTTCTAAACTTTCTTTTGGAG
TATATGATGCAGCTTTTTCGTAATTTCGAAAGCATCCACCGCGGACCTTT
TTTCTCCCCCTCTTGACAATAAATCACATTAAAGAGTTCAAGAGCTGTTT
CCAAGCGCCAGTTTGGAAATCAGAGCTGTTTACTCAATTTTCGTCTGTTT
TTCCAGTTGGATTTTAGAGACAGGGGTCTTTTTTTCTTATAACTGTTTCT
TAGAGCTGTTTTCATTCACCTTCAACCTGGAAATAAGGGACTGCTTCAAA
AAAATACACCATTTTCTTATTTACCATTTTGGTGTGGTGGATGTATCAGT
TATTTTATTGCATGAATGAGTTTTCAATTTTCTTCTGAAGAAAAGTTTCA
TTTCAGCTACCCAAGACAATGTTAATTTAAAGTCTGAAATTTCCCTTACA
AACAAATTTTGTATATTACTTTTGCCCATATTGCTCATTAGGTTCAGGAG
AGCATTTCGTGGCTGAAGTTAAATTCCCATTCGTCGCTCGGAGCCGAGAT
GAAATGAACTTATCGAAGAACACCATCGTTCGACTTGCACCAAAAGCGCG
ACAACCAAATATTAAGGGATGGCTACTGGCATCTGATGGTGAAAACCAAG
GTCTTGTTCCTGCCAATTATATCAAGGTATTATTTCTTTGATGCGTAATG
TCAATTTTGAAGTGGAAAAGTTGGTTTCTTTTCAATTTATTGGCATCATA
TAGTTCGAGTTCATATTTTTCGACCCATCCCTCTTAATTGTGCTCGTGTC
TGAGCATACTGAGCATATTTAGGTTGCACAATTTTCCATATCAAAGCACA
ATCTTTTTCACGGACACCTGTTTTTGATCTTTATTCTATAGCAATTGGCT
GACGAGAAGAAAATTTGGTTTAATCGATTGTTCCCTTTTTTCCAGGTACT
TGGGAAGAATCGCAAAGAGAGCACGCTACCAACGACACAAACAAAGTCAC
ATGATCTTGTTGATAACAAACCGAACGTTTCAAACGATAATTTTAATGAT
ATTTACGAGAACAATGAAGAACCGAATAACACAGAGAAAGGTTAGCATGG
ATGAAATGATGTGATGTCCTGGATAATATGAGATCACTTTGATTGAAGGG
GTAGAACAGCAATCAATAAAATTACGACGATTGTTGATGAAAGAAATTCT
TTACAAAGTTAGACTTACCTAATCTGAATAGACACGAGATTTCATAATGA
ATATCCGAAGAGAGCAGTAAAGGCACCTGTGCAAAGGATCAAAGCCTCTA
ATAGGCCGGGTGTTAAGTAAAATTATACTGTATTATTCCCACAAATATGT
ATGTAAACAGGAGCTCACTGAGGTTAAGATCAGGGTTGAAGTATAGATTC
ACAAAAGACTTTTTAAATAGCGCTTAGTTCTTAACCCTTAGATCAACATC
TCTTTAACTTCCTTTGTGTGGTATCCTTCAATCTGTCAGTGAATTTGCCC
ATCTGTACACGTTGTAGACATTGGAAATAAAGATATGAGATTATTATTAT
TATTATTGTTGTAAGATCTAAATATAGTCTGTCCCAAAGAAGGGGACAAA
TTTTTATATAAGGTAGAATTATCTTAACTAACAACTAGGTTTAGAATGAT
TGAAATAAAATTAAAATTTCCTTTTTCATTCAATAGATTTTCAATTCCCA
AGACGATTGAATAGGCTTTTGAGAGTATACCTGAGTATACAAGTCATAAA
ATCCCGCATGAATTATATGGATTTTACTTTATATAGAAATTTGTCAACTT
GTTTGGGGCACAATGTATGCGACATGGTAGAATATCTAAGTTTTTCTTTT
TTATTGATTTGTACTTTCAGACTGAATTTTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043733XLOC_043733Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070227-exon-scaffold_516-1575043694:63124..63151TCONS_00070227-exon-scaffold_516-1575043694:63124..63151Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1575043694:50898..51002TCONS_00070227-exon-scaffold_516-1575043694:50898..51002Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1575043694:50048..50142TCONS_00070227-exon-scaffold_516-1575043694:50048..50142Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1575043694:49351..49419TCONS_00070227-exon-scaffold_516-1575043694:49351..49419Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1575043694:48883..49065TCONS_00070227-exon-scaffold_516-1575043694:48883..49065Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1575043694:48538..48681TCONS_00070227-exon-scaffold_516-1575043694:48538..48681Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1575043694:46896..47048TCONS_00070227-exon-scaffold_516-1575043694:46896..47048Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1575043694:46226..46410TCONS_00070227-exon-scaffold_516-1575043694:46226..46410Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1575043694:45812..45956TCONS_00070227-exon-scaffold_516-1575043694:45812..45956Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1575043694:45019..45115TCONS_00070227-exon-scaffold_516-1575043694:45019..45115Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1510915933:63124..63151TCONS_00070227-exon-scaffold_516-1510915933:63124..63151Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1510915933:50898..51002TCONS_00070227-exon-scaffold_516-1510915933:50898..51002Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1510915933:50048..50142TCONS_00070227-exon-scaffold_516-1510915933:50048..50142Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1510915933:49351..49419TCONS_00070227-exon-scaffold_516-1510915933:49351..49419Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1510915933:48883..49065TCONS_00070227-exon-scaffold_516-1510915933:48883..49065Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1510915933:48538..48681TCONS_00070227-exon-scaffold_516-1510915933:48538..48681Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1510915933:46896..47048TCONS_00070227-exon-scaffold_516-1510915933:46896..47048Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1510915933:46226..46410TCONS_00070227-exon-scaffold_516-1510915933:46226..46410Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1510915933:45812..45956TCONS_00070227-exon-scaffold_516-1510915933:45812..45956Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1510915933:45019..45115TCONS_00070227-exon-scaffold_516-1510915933:45019..45115Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1491911889:63124..63151TCONS_00070227-exon-scaffold_516-1491911889:63124..63151Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1491911889:50898..51002TCONS_00070227-exon-scaffold_516-1491911889:50898..51002Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1491911889:50048..50142TCONS_00070227-exon-scaffold_516-1491911889:50048..50142Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1491911889:49351..49419TCONS_00070227-exon-scaffold_516-1491911889:49351..49419Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1491911889:48883..49065TCONS_00070227-exon-scaffold_516-1491911889:48883..49065Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1491911889:48538..48681TCONS_00070227-exon-scaffold_516-1491911889:48538..48681Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1491911889:46896..47048TCONS_00070227-exon-scaffold_516-1491911889:46896..47048Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1491911889:46226..46410TCONS_00070227-exon-scaffold_516-1491911889:46226..46410Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1491911889:45812..45956TCONS_00070227-exon-scaffold_516-1491911889:45812..45956Clytia hemisphaericaexon
TCONS_00070227-exon-scaffold_516-1491911889:45019..45115TCONS_00070227-exon-scaffold_516-1491911889:45019..45115Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_516supercontigscaffold_516:45019..63151 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.2	27.1243	8.19552	10.7196	17.277	11.6347	20.6819	23.3767	17.3258	20.418	15.7838	16.3492	18.7965	16.3609	18.4907	17.5578	21.092	20.6656	17.155	16.384	14.3429	17.9891	22.6223	25.9793	14.0832	12.1044	10.3422	9.08965	17.3637	12.5923
Blast
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BLAST of TCONS_00070227 vs. Swiss-Prot (Human)
Match: PEX13 (Peroxisomal membrane protein PEX13 OS=Homo sapiens GN=PEX13 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 9.718e-40
Identity = 77/227 (33.92%), Postives = 136/227 (59.91%), Query Frame = 3 
Query:  360 ENASQNAFQSAQSFIGAFSSISMMLESTLFAVQNSVRAIAGVADQFGHLRHYLLS--SAASFYRLVNYYYKKILCVLRLKQPDTQDERFWQDAMSGRS--GTEE-----SRLYASLLFFSLVIATPWFIWKLLKSINFQQKQEEKWFEGSGEHFVAEVKFPFVARSRDEMNLSKNTIVRLAPKARQPNIKGWLLAS-DGENQGLVPANYIKVLGKNRKESTLPTTQT 1010
            E +S+ AFQS +S + AF+S+SMM+++T  AV NS RA+  VA+ F  L+ +     SA +  R + Y Y+++  +L L++  +++E  W ++    +  G E+     ++ +   LFF++++  P+ IWKLL + + +      W  G  +H VA  ++ F A S +E++     ++ LA K +QP ++GWLLAS DG+  GL+PANY+K+LGK +   T+ +++ 
Sbjct:  123 EESSRGAFQSIESIVHAFASVSMMMDATFSAVYNSFRAVLDVANHFSRLKIHFTKVFSAFALVRTIRYLYRRLQRMLGLRR-GSENEDLWAESEGTVACLGAEDRAATSAKSWPIFLFFAVILGGPYLIWKLLSTHSDEVTDSINWASGEDDHVVARAEYDFAAVSEEEISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKILGKRKGRKTVESSKV 348
The following BLAST results are available for this feature:
BLAST of TCONS_00070227 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PEX139.718e-4033.92Peroxisomal membrane protein PEX13 OS=Homo sapiens... [more]
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