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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070174 ID=TCONS_00070174|Name=TCONS_00070174|organism=Clytia hemisphaerica|type=transcript|length=553bp
ATCGCTATTGTTGAAAAAACTTCCACCGGGGCACTAAAACAGGAGTGTTC
AAGGTCAAGATTAAAATCGGATGTTGTCAATGACCAGTGCTTCATAGCTA
TCTCCTCCAAGGGAAAATGACGtataaacataattttttcacaaaatgat
AGCTAATAGACATAGGTACCGTTCATTATACTTTTGAACCCCATAGGATG
CCGTCCGAGAATGGTGCTGTCCGATAATAAACGCGTTTaagGTCAACATT
TGAAAAAGACGCTGACAATGACCAGTGCTATGAAGTTTACTATCTTCTCC
Tggggaaaatgaggtatgaacttaattttttcactaaatgatagctaata
gACATAGCTACCGTCCATTGTAGTTTTGAGCACCAAAGAATGCTGTCCGA
AAATGATACTGTCCGGTAAAGTGAATTGGATGCTGAAAGTCGAGACAGAT
GCTGAAAAAGATGTTGAATTGGATCGGATGCTAACTTCATTTTGGTGCTG
CTGCTGTattaatttttatcatgttttctggtcttttgtagagtatttaa
aga Run BLAST on NCBI transcript from alignment at scaffold_514:120195..121229- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070174 ID=TCONS_00070174|Name=TCONS_00070174|organism=Clytia hemisphaerica|type=transcript|length=1035bp|location=Sequence derived from alignment at scaffold_514:120195..121229- (Clytia hemisphaerica)
ATCGCTATTGTTGAAAAAACTTCCACCGGGGCACTAAAACAGGAGTGTTC
AAGGTCAAGATTAAAATCGGATGTTGTCAATGACCAGTGCTTCATAGCTA
TCTCCTCCAAGGGAAAATGACGTATAAACATAATTTTTTCACAAAATGAT
AGCTAATAGACATAGGTACCGTTCATTATACTTTTGAACCCCATAGGATG
CCGTCCGAGAATGGTGCTGTCCGATAATAAACGCGTTTAAGGCCCGGGGG
GGGTACTAGGGTTGCGAGCTGACGGGGGGTGCCGCCCGACTTTCGACCTT
TGGACCCTTACCGGGACTAGAGAAGAGAAAACCAAGGAAAATTTTGTGAA
TTTTAAGACCCTTAGCGGGACTAATTTGACCAATTTTGACCAAATTTCGA
TCTTTCAGGAGGTAAAAATTTGAAATTTTCCTATCTTTCCGACCCTAAGT
GGGACTGAAATTTGATTTTCTGATTTTTCCGACCCTTAGCGGGACTTTGG
AAGTCCAAAAAAGGTACCCTTAAGGGCGGCACATACCGTANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAGGTCAACATTTGAAAAAGACGCTGACAA
TGACCAGTGCTATGAAGTTTACTATCTTCTCCTGGGGAAAATGAGGTATG
AACTTAATTTTTTCACTAAATGATAGCTAATAGACATAGCTACCGTCCAT
TGTAGTTTTGAGCACCAAAGAATGCTGTCCGAAAATGATACTGTCCGGTA
AAGTGAATTGGATGCTGAAAGTCGAGACAGATGCTGAAAAAGATGTTGAA
TTGGATCGGATGCTAACTTCATTTTGGTGCTGCTGCTGTATTAATTTTTA
TCATGTTTTCTGGTCTTTTGTAGAGTATTTAAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070174-exon-scaffold_514-1575043694:120989..121229 | TCONS_00070174-exon-scaffold_514-1575043694:120989..121229 | Clytia hemisphaerica | exon |
| TCONS_00070174-exon-scaffold_514-1575043694:120195..120506 | TCONS_00070174-exon-scaffold_514-1575043694:120195..120506 | Clytia hemisphaerica | exon |
| TCONS_00070174-exon-scaffold_514-1510915933:120989..121229 | TCONS_00070174-exon-scaffold_514-1510915933:120989..121229 | Clytia hemisphaerica | exon |
| TCONS_00070174-exon-scaffold_514-1510915933:120195..120506 | TCONS_00070174-exon-scaffold_514-1510915933:120195..120506 | Clytia hemisphaerica | exon |
| TCONS_00070174-exon-scaffold_514-1491911889:120989..121229 | TCONS_00070174-exon-scaffold_514-1491911889:120989..121229 | Clytia hemisphaerica | exon |
| TCONS_00070174-exon-scaffold_514-1491911889:120195..120506 | TCONS_00070174-exon-scaffold_514-1491911889:120195..120506 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_514 | supercontig | scaffold_514:120195..121229 - |
Blast
The following BLAST results are available for this feature:
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