TCONS_00070165 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070165
Unique NameTCONS_00070165
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1784

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070165 ID=TCONS_00070165|Name=TCONS_00070165|organism=Clytia hemisphaerica|type=transcript|length=1784bp
ttgaaaataaaatccaaagTGTGGTTTCCTATCATACCTCATTTTGTTTC
TTAGATTTACCAAGTTGGACACGAACATGCGATCATTGTATACTGGCAAT
ATATTCAAACTTGGACATTCAGGGCTCCACAGGCCATCATAAACACTATC
ACCAAACAAACAGAAGGNTCGAAGTTTTCACCAATATGGTTAAGCCAAAA
CGCCACGTATATGATTTGCGATGGACTCTCCTTTTGGCGGTTTTACGTCA
GATACTTGGAAATAAAAAGAGANTAAAACTGAAATTCGTGTACCCAAAGA
AACCCGACTACCTCCACAAAATAAAGATCACCTTATCACTGAAGAGGATT
GTTACGAAAAATCGAAGGTCACCCCTAAAGAGACAGCATCAGAAATTGAA
GACAGCGAAAAAACACAATCAAACAATGCTATGGAAACTTCAGAAACCAA
ACTTGCCGATTCTGCCGTCACTGAGACGACAGCTAATAACAAAGTAACTA
GACCAGagaatcaagtttctaaaaatgAACCTAAAGCTGGATCACAATGT
TCTGATAAAAAACATCCGTCTGAAAACCAACTATTGTCTAAAGCAACGGT
TGACGAGAACCTAGACCGTGGAGAGGAAGAATTGGCTGAAAATAATAAGA
TTACATTACCTTCATCCAATGATTCAAGCTCTGAAATGCATTCAGTCAAC
GCACATCTGGTATCTCATAAGAATCttccaaataaagaaaaaatggaaaa
aaagaatCAAGAAACTGGTACCAGTAGCCTGGAAACGACTGAAAAACAAA
AAGAAGATCTGACAATCGAAAATCCATTACCGGAAAAAGAGTTACCATTA
AAAACGAAAGAACCTGCTAAAAAGCCGTCAGCCGATAATAATGAGCAGCA
TTCGAAGGACAAAGCACCGGTACCGAAAGGGAAGAAGAAGATCTCACAAC
GTATTTTATTGAGAGACAATAACGGAAGTGACGAACTCCAAATTCAATGC
GAATACCGTACAATGAAAGTTTTCCCTTGGTTGAAGATGAACGGTGAACT
AAACAGTGTGCTTCTTcgcaaatttcaagaaaatgttttgacaCACATAC
TCTTGAATCCTGGAGTCAAGCAGACAAGTCTCATCTCATACTTCAAACTG
ATTCTCTTCCCTGAAGCCACCATGCGATTATTGAAGTTTCTGGAATTGAA
CAAATCGATAACGAAACATTATTTGGTTCGAAGAAAGACTTCTTTATTTG
GCGAACCACTTTCTCCGTCCAAAGGTTTATCAGAGGATGACGTGTATTAC
TTGCCAACCATGTCTACCATTATGAACATGACAGATACGAATCGTTGACG
TTGGAAGAGTGATCATAAAAGGTGAGTCGGATGGGAAACCTTGTTGAAAA
GAGATTTGAATAAATTACTCGGTGATGATTACTTTGGTTCGTCTACcaaa
gaatttcttttcaatctGACGAATATTTTTATTCGTTGTTTTAATTACAC
ATTATCTATGATTGGCTCGACCCAGACTCTTCGCTATGAAGGTGAAGTGC
TAGAACATTTGGTATTGTGGACATTCGAGCTTGTCGGTTATTCAGCatca
tgtactaaaattattagGGATATTTTGACACAGAGACCACccaattttgg
tattttcttgACGAATTTTATTGTCTTCTGGGGACCATTTTTCTCAAGAG
GGTTGATATTTGCAACgggatattctttttttttcttcaaaaattgatac
ttttaaaCAATGATGCTTTATGAATCGAGCAAAT
Run BLAST on NCBI

protein sequence of TCONS_00070165-protein

>TCONS_00070165-protein ID=TCONS_00070165-protein|Name=TCONS_00070165-protein|organism=Clytia hemisphaerica|type=polypeptide|length=305bp
METSETKLADSAVTETTANNKVTRPENQVSKNEPKAGSQCSDKKHPSENQ
LLSKATVDENLDRGEEELAENNKITLPSSNDSSSEMHSVNAHLVSHKNLP
NKEKMEKKNQETGTSSLETTEKQKEDLTIENPLPEKELPLKTKEPAKKPS
ADNNEQHSKDKAPVPKGKKKISQRILLRDNNGSDELQIQCEYRTMKVFPW
LKMNGELNSVLLRKFQENVLTHILLNPGVKQTSLISYFKLILFPEATMRL
LKFLELNKSITKHYLVRRKTSLFGEPLSPSKGLSEDDVYYLPTMSTIMNM
TDTNR
Run BLAST on NCBI

transcript from alignment at scaffold_514:92114..98869+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070165 ID=TCONS_00070165|Name=TCONS_00070165|organism=Clytia hemisphaerica|type=transcript|length=6756bp|location=Sequence derived from alignment at scaffold_514:92114..98869+ (Clytia hemisphaerica)
ttgaaaataaaatccaaagTGTGGTTTCCTATCATACCTCATTTTGTTTC
TTAGATTTACCAAGTTGGACACGAACATGCGATCATTGTATACTGGCAAT
ATATTCAAACTTGGACATTCAGGGCTCCACAGGTAAAGAAAAATTTCCTT
GTCTTTCTTCTTATTTTGATTCTgccattattttgaaaatctgcAGGAGG
GTGATCAAAATGATTGATGGAGAGTATTAtgctgatacaagagtgtggat
GATATGTCAGACATTGCTGTGTGTAACACTCATGCTGTTTTATTCGCGAG
AATAGGTAATGTAAACTTCCTGTGAATTATCAAATAGAAATAGCTTTACG
CTCGCGACGAGCAATATACTTCACCGCGTAGTTCGAGTGTCGCCACTATT
CTTCATGGTGTATGTTTCAACCGCGTTTTAGACATTTGCATTCCtacttg
aaaaagaagaaatttttatttcgtAACGAGTAGGATCCATCCCCTGATGT
AGAGGGCTCATATAATAATGAGTACTGGATTGTTGGTTTTAAGATTATGC
TCCTTGCTTGTATTAAGATCGGCACAATTGTTTTACGTCACATATCATAG
GTTATCTCGCCTATGCTTGGTATTGATTTTGCTGAAGAAAAAACATAATC
ACCCCTGTTGAGAAGGTCCaaccttttttaacctctttATACTATCTAGA
AATGCTATAACCTTCTTGGAATCCGATCATGCTATCTTAGGATGATATTG
TAGCCGTCTGGAAACTTTTATGTTTTCTTTAATCTAGGGACAAGAAATCC
CGGTTATTTTAGagagaattttttaattttatgaaaTTACCACCTTTTGA
ATTGGAAGAGCTCTAATCCCTTGGTACGGTAACGTTGGTATCAACAGGTC
GGGGtgtaagaatttttttctggatAAGACCAGTCGGATATGTAATTTTG
ATTCAATGAATCATAAAATATAAATTCTTTTTCTCTCTTAAAGGCCATCA
TAAACACTATCACCAAACAAACAGAAGGNTCGAAGTTTTCACCAATATGG
TTAAGCCAAAACGCCACGTATATGATTTGCGATGGACTCTCCTTTTGGCG
GTTTTACGTCAGATACTTGGAAATAAAAAGAGANTAAAACTGAAATTCGT
GTACCCAAAGAAACCCGACTACCTCCACAAAATAAAGATCACCTTATCAC
TGAAGAGGATTGTTACGAAAAATCGAAGGTCACCCCTAAAGAGACAGCAT
CAGAAATTGAAGACAGCGAAAAAACACAATCAAACAATGCTATGGAAACT
TCAGAAACCAAACTTGCCGATTCTGCCGTCACTGAGACGACAGCTAATAA
CAAAGTAACTAGACCAGagaatcaagtttctaaaaatgAACCTAAAGCTG
GATCACAATGTTCTGATAAAAAACATCCGTCTGAAAACCAACTATTGTCT
AAAGCAACGGTTGACGAGAACCTAGACCGTGGAGAGGAAGAATTGGCTGA
AAATAATAAGATTACATTACCTTCATCCAATGATTCAAGCTCTGAAATGC
ATTCAGTCAACGCACATCTGGTATCTCATAAGAATCttccaaataaagaa
aaaatggaaaaaaagaatCAAGAAACTGGTACCAGTAGCCTGGAAACGAC
TGAAAAACAAGTAAGTGAAATTTATCAATCTATATTTTACTCTAGTCTct
cgaatagacgtcccccctgctaattgttaaatgaaaaaaatccatccccc
cgctcttcgaataatttaatattttattacagtgtagatagaccttaaac
ttattaaaattttcctttttgttagtattggttcttattttacgtgttca
tttgttaaagtttcacttttgttgttgaaattgatatcagttaaaaaaaa
ttatgtcttcaaattaccccaccccctcttattccatccaccccgcttat
tagaatttagaaaattttcctccccccctgcttatttgcccccccccgtc
tattcgggagacaagagtaagtcTTTAGACCCATTATCGACCGCCATAGG
CGgcttctttcatagtggtacgctaatctcgttttgccttggctcattac
tccACCATttattttcggtttttttaactagattacccaggtgtttctct
ttttttttccctgaatgtcttttattcggaattgaaaaatcgagacatga
aaaatggctaTATTGTAATCTAACTTTCAATGAATagtctaaaatgtact
ggagatgacatgtaggcgttaataatgtgcacgcgctctttcgcgagcgt
gatgggGAAGgtggtcgtttcagtgtggtttacatccacactgtgaccta
gttcatacattttggtaaaaaaattaagatttttattAGGAATAAAAAGT
AAGGTAAAGGTAAAGTGTTTAATTTATTGAGAACTCTTTGAAAATAAtct
tttctaaaaactttaaGAAAGAAGATCTGACAATCGAAAATCCATTACCG
GAAAAAGAGTTACCATTAAAAACGAAAGAACCTGCTAAAAAGCCGTCAGC
CGATAATAATGAGCAGCATTCGAAGGACAAAGCACCGGTACCGAAAGGGA
AGAAGAAGATCTCACAACGTATTTTATTGAGAGACAATAACGGAAGTGAC
GAACTCCAAATTCAATGGTAAGTTAAGGTCGGGGCCATATGAAACATTCT
TCATCAAATAGAAGCATTTGAAGTAACGATTTTGTCTAGATAGAAACAGT
ttcagaaaacttttgaaactttttattGGGCCACTTGAAACAAAGTTTAA
CAATTAAGTTGCAACTTATTTATGTTTCATCTTGATGAAATTTGTTTCTA
GTAGCCCCAAACCTTTAGCAATCGATTAAAATAATGGTTCAACATTCGGC
TATTAACTATAACGTGAAAAGCTGCATAGGCTCAATTTTAACATATATAT
CATATGACCATGAGGAGCAGGAGCTGGTCTATGGTCCCGTTACCTTTTTG
CAGACTACTATtctttaaaactgttttttcgACCCCCTTGTTTCAAACGG
CTCTTGGGGGCCCATGGTAAGTCAAATATGTGTTTGCTTTCGTCCTAACA
AACCCACACTATGTGGGTGAATTGTTTTCCATTACTCTGTGTGGGGAAGT
AAACTTTCAGTGTGGTGTTTGGCTAAAGCAAAGCAATCGCAACAAATCAA
GCGTcaatcataaacataaacattggACCCAGTCGCTCTTGCTTTCGTTC
TTAGACGAAAGGCAACGCACTTTTGAACATTCTATCTGAACAACAATATC
ATAACATTTGCCACGTCCCTGTGTAAGTGGAATGGAATTTATTCTCATCG
AATCTCCTTCTTTTCATTAATTTCAGCGAATACCGTACAATGAAAGTTTT
CCCTTGGTTGAAGATGAACGGTGAACTAAACAGTGTGCTTCTTcgcaaat
ttcaagaaaatgttttgacaCACATACTCTTGAATCCTGGAGTCAAGCAG
GTCTGTTTTGTTGGATTCGtttaattttttctcaattatAATTTGACTAG
GCTGATCTTTCGTGAGGCCCAATCCCCCTCATCAATGTCTGTTTTACGAA
TAAATTCTGTCACTGGTAGCGGTTGTTATAAGCAACATTGAATTGCAGGG
CCAATGCTTGATTCATAATGCTTGGACAGGGAACCGTTTTCTTGTTCTCT
TTTCTCCGAGAGTCTCAGGTTTTGGAAATAAgaatacagttgacactctc
taattcgatttgcAAGGGGagatttcatcgaataagggagcttatcgaat
agaaAAGCGTCGTTGAGTTTCTTCATGGCGGTGACTTATTCGATATTACG
AATAATTGAGCGTATCGGATTGTAGAAAGTTGAATTAGAGATTGTCAACT
GTGCAAATGATGACTAAAATTAGCTTTAATGACGACGGCATAGGCACGTT
ATGGCATCCTCCAATAATGAGACCTCTTCAACATCatttaattttgatat
tttttgttcaactGTGATGAGTAAATCTGCTGATATTTTTTGATACGGAC
ATTTATTCTTGTAAGATGCAGGTACCTTTTATTGTGCAGAGTCTTGTCTA
AATTTGCCCTTTATGTTTATAAGAGTCTATTTTTGAATTGTTAATTGAGT
GATAAAAGTTTTTCCATCtcagacggattttcgtctcaGCAAAGTATATG
AAGAGGATTCTCCGTctcaaaatttcttcaaatttcttcaaatttcaaGA
ATGTATGCTATTTTCTGCGTAAAATCTATTTTCCGTCGCAGACGAAACAA
CCTTGCCTTGAGAAACTGTTGAAGGGTTTTAAATCATTaattatgtttat
gtttttctAGACAAGTCTCATCTCATACTTCAAACTGATTCTCTTCCCTG
AAGCCACCATGCGATTATTGAAGGTACGTAGACGTGTTTTTTCATTAGCA
GTGCTCTTTGTACGTAAGTTATATGCGAAGTAGGATGCAAACTGAAGGCT
TCTCTTCCGATATTTTTCTATCCGAAGAGTGAAGGTGCCActgattgttt
cgagtgtattacaatagaaatctcttagaaaTTCCTCGgaggaaattcta
ttgttatacactcgaaacaatcccacaatgcatcgcttttttagaaaaga
caaaaactccgataagccCAGTGGGCACACGACGTCCTAAGGACGTCCTT
AGAAAGTCCATTTTGGACGGGAGGACGTCTAGCGGGGACGTCTATTGGAC
GTTCTATGGACGTGCAAAATGAAGTCTCCGTCCGTCCGAATTTGGTCCGA
AAAAGACGTCCTAATTGGACGCGAAATGGACGGTATGTGGACGTTGCTTT
TAATTCAGATGTCTCAAGGACGTTTTACCGACGTCATATGGACGCCGGAG
TAAGCCACTTAATTAATTGGACGTCTGAAGGACGTTTTACAGACTTCATT
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGCTTCTCTTCCGATATTTTTCTATCCGAAGAGTGAAGGTGCCActgatt
gtttcgagtgtattacaatagaaatctcttagaaaTTCCTCgaggaaatt
ctattgttatacactcgaaacaatcccacaatgcatcgcttttttagaaa
agacaaaaactccgataaggtctattactGAGCATCAAACAGAAAGGCAT
CATCTTTAGTGTGAACTGGGAACCCACAGCCTTGCGCACTGTCACTACGT
GAGTGTGTACTAATGAAAATTCAAAGTACGTTCCGTGAAGAATGTGTCAG
AGTTTATAGCTCGTACGgcaattgattttgaaaattacctTTAAAAAGTT
ACTTTATCTTACATTGATGTTGAAGTTGAATTCAACATTTACATTAAAAC
TACTCGGATATCATGAATGaaggttttttaatttttttttttgattcaaa
aaGTTTGATTCGCCTTGTGTATATCTGTTAGTCAgacattttatattttt
aacaagtttttcatgtttctttcttgtctttcaCAGTTTCTGGAATTGAA
CAAATCGATAACGAAACATTATTTGGTTCGAAGAAAGACTTCTTTATTTG
GCGAACCACTTTCTCCGTCCAAAGGTAATATTCTTTTCAGATCTTATTAT
CATTCGGTAATGTCGAACAGCTCAGGAATATAATTGTTCGTTAGGGTTAA
GTTCGACCCCTCTGTGTACATTTTGATGTCAGAATTAAAAAGAGAAATTA
AAAGGTTTAGTCGCCAACAATCCTAAAGGGTAGGTTTTGCCGGGGCTTCA
AGGGTCTTGTAAAAGAATCGACTTGATAAATTCTATATGCAATCAAAGTT
TAAAGGGTcgattttaaaagctttttcgCCCAAACACGGTCATTTCTAAA
TGTCATAATAGCGAGGTTTATACATGGCAcattttctgcgacggagacga
tTCGTTTTCGATTTGACTAGATCCTAACTGGCTGAGAACGACGGTGAATC
TGCACTTTTCTTATTTAAGTTTGAACGTTTGAATACAATGGTGTCTTCCg
ttaaaaaaaatatgacccGCGTCCTATAGTGGTACCTTAACGGTACAAAA
TCAACAAACTCCGGCTGAAGATTTTAATCGAAATTCTGCTTTCtccattt
tccaaattttgaatacAAAGTATACGTTTCCATTTGATTTTGACAGGTTT
ATCAGAGGATGACGTGTATTACTTGCCAACCATGTCTACCATTATGAACA
TGACAGATACGAATCGTTGACGTTGGAAGAGTGATCATAAAAGGTGAGTC
GGATGGGAAACCTTGTTGAAAAGAGATTTGAATAAATTACTCGGTGATGA
TTACTTTGGTTCGTCTACcaaagaatttcttttcaatctGACGAATATTT
TTATTCGTTGTTTTAATTACACATTATCTATGATTGGCTCGACCCAGACT
CTTCGCTATGAAGGTGAAGTGCTAGAACATTTGGTATTGTGGACATTCGA
GCTTGTCGGTTATTCAGCatcatgtactaaaattattagGGATATTTTGA
CACAGAGACCACccaattttggtattttcttgACGAATTTTATTGTCTTC
TGGGGACCATTTTTCTCAAGAGGGTTGATATTTGCAACgggatattcttt
ttttttcttcaaaaattgatacttttaaaCAATGATGCTTTATGAATCGA
GCAAAT

Coding sequence (CDS) from alignment at scaffold_514:92114..98869+

>TCONS_00070165 ID=TCONS_00070165|Name=TCONS_00070165|organism=Clytia hemisphaerica|type=CDS|length=5508bp|location=Sequence derived from alignment at scaffold_514:92114..98869+ (Clytia hemisphaerica)
ATGGAAACTTCAGAAACCAAACTTGCCGATTCTGCCGTCACTGAGACGAC
AGCTAATAACAAAGTAACTAGACCAGagaatcaagtttctaaaaatgAAC
CTAAAGCTGGATCACAATGTTCTGATAAAAAACATCCGTCTGAAAACCAA
CTATTGTCTAAAGCAACGGTTGACGAGAACCTAGACCGTGGAGAGGAAGA
ATTGGCTGAAAATAATAAGATTACATTACCTTCATCCAATGATTCAAGCT
CTGAAATGCATTCAGTCAACGCACATCTGGTATCTCATAAGAATCttcca
aataaagaaaaaatggaaaaaaagaatCAAGAAACTGGTACCAGTAGCCT
GGAAACGACTGAAAAACAAAAAGAAGATCTGACAATCGAAAATCCATTAC
CGGAAAAAGAGTTACCATTAAAAACGAAAGAACCTGCTAAAAAGCCGTCA
GCCGATAATAATGAGCAGCATTCGAAGGACAAAGCACCGGTACCGAAAGG
GAAGAAGAAGATCTCACAACGTATTTTATTGAGAGACAATAACGGAAGTG
ACGAACTCCAAATTCAATGCGAATACCGTACAATGAAAGTTTTCCCTTGG
TTGAAGATGAACGGTGAACTAAACAGTGTGCTTCTTcgcaaatttcaaga
aaatgttttgacaCACATACTCTTGAATCCTGGAGTCAAGCAGACAAGTC
TCATCTCATACTTCAAACTGATTCTCTTCCCTGAAGCCACCATGCGATTA
TTGAAGTTTCTGGAATTGAACAAATCGATAACGAAACATTATTTGGTTCG
AAGAAAGACTTCTTTATTTGGCGAACCACTTTCTCCGTCCAAAGGTTTAT
CAGAGGATGACGTGTATTACTTGCCAACCATGTCTACCATTATGAACATG
ACAGATACGAATCGTTGAATGGAAACTTCAGAAACCAAACTTGCCGATTC
TGCCGTCACTGAGACGACAGCTAATAACAAAGTAACTAGACCAGagaatc
aagtttctaaaaatgAACCTAAAGCTGGATCACAATGTTCTGATAAAAAA
CATCCGTCTGAAAACCAACTATTGTCTAAAGCAACGGTTGACGAGAACCT
AGACCGTGGAGAGGAAGAATTGGCTGAAAATAATAAGATTACATTACCTT
CATCCAATGATTCAAGCTCTGAAATGCATTCAGTCAACGCACATCTGGTA
TCTCATAAGAATCttccaaataaagaaaaaatggaaaaaaagaatCAAGA
AACTGGTACCAGTAGCCTGGAAACGACTGAAAAACAAAAAGAAGATCTGA
CAATCGAAAATCCATTACCGGAAAAAGAGTTACCATTAAAAACGAAAGAA
CCTGCTAAAAAGCCGTCAGCCGATAATAATGAGCAGCATTCGAAGGACAA
AGCACCGGTACCGAAAGGGAAGAAGAAGATCTCACAACGTATTTTATTGA
GAGACAATAACGGAAGTGACGAACTCCAAATTCAATGCGAATACCGTACA
ATGAAAGTTTTCCCTTGGTTGAAGATGAACGGTGAACTAAACAGTGTGCT
TCTTcgcaaatttcaagaaaatgttttgacaCACATACTCTTGAATCCTG
GAGTCAAGCAGACAAGTCTCATCTCATACTTCAAACTGATTCTCTTCCCT
GAAGCCACCATGCGATTATTGAAGTTTCTGGAATTGAACAAATCGATAAC
GAAACATTATTTGGTTCGAAGAAAGACTTCTTTATTTGGCGAACCACTTT
CTCCGTCCAAAGGTTTATCAGAGGATGACGTGTATTACTTGCCAACCATG
TCTACCATTATGAACATGACAGATACGAATCGTTGAATGGAAACTTCAGA
AACCAAACTTGCCGATTCTGCCGTCACTGAGACGACAGCTAATAACAAAG
TAACTAGACCAGagaatcaagtttctaaaaatgAACCTAAAGCTGGATCA
CAATGTTCTGATAAAAAACATCCGTCTGAAAACCAACTATTGTCTAAAGC
AACGGTTGACGAGAACCTAGACCGTGGAGAGGAAGAATTGGCTGAAAATA
ATAAGATTACATTACCTTCATCCAATGATTCAAGCTCTGAAATGCATTCA
GTCAACGCACATCTGGTATCTCATAAGAATCttccaaataaagaaaaaat
ggaaaaaaagaatCAAGAAACTGGTACCAGTAGCCTGGAAACGACTGAAA
AACAAAAAGAAGATCTGACAATCGAAAATCCATTACCGGAAAAAGAGTTA
CCATTAAAAACGAAAGAACCTGCTAAAAAGCCGTCAGCCGATAATAATGA
GCAGCATTCGAAGGACAAAGCACCGGTACCGAAAGGGAAGAAGAAGATCT
CACAACGTATTTTATTGAGAGACAATAACGGAAGTGACGAACTCCAAATT
CAATGCGAATACCGTACAATGAAAGTTTTCCCTTGGTTGAAGATGAACGG
TGAACTAAACAGTGTGCTTCTTcgcaaatttcaagaaaatgttttgacaC
ACATACTCTTGAATCCTGGAGTCAAGCAGACAAGTCTCATCTCATACTTC
AAACTGATTCTCTTCCCTGAAGCCACCATGCGATTATTGAAGTTTCTGGA
ATTGAACAAATCGATAACGAAACATTATTTGGTTCGAAGAAAGACTTCTT
TATTTGGCGAACCACTTTCTCCGTCCAAAGGTTTATCAGAGGATGACGTG
TATTACTTGCCAACCATGTCTACCATTATGAACATGACAGATACGAATCG
TTGAATGGAAACTTCAGAAACCAAACTTGCCGATTCTGCCGTCACTGAGA
CGACAGCTAATAACAAAGTAACTAGACCAGagaatcaagtttctaaaaat
gAACCTAAAGCTGGATCACAATGTTCTGATAAAAAACATCCGTCTGAAAA
CCAACTATTGTCTAAAGCAACGGTTGACGAGAACCTAGACCGTGGAGAGG
AAGAATTGGCTGAAAATAATAAGATTACATTACCTTCATCCAATGATTCA
AGCTCTGAAATGCATTCAGTCAACGCACATCTGGTATCTCATAAGAATCt
tccaaataaagaaaaaatggaaaaaaagaatCAAGAAACTGGTACCAGTA
GCCTGGAAACGACTGAAAAACAAAAAGAAGATCTGACAATCGAAAATCCA
TTACCGGAAAAAGAGTTACCATTAAAAACGAAAGAACCTGCTAAAAAGCC
GTCAGCCGATAATAATGAGCAGCATTCGAAGGACAAAGCACCGGTACCGA
AAGGGAAGAAGAAGATCTCACAACGTATTTTATTGAGAGACAATAACGGA
AGTGACGAACTCCAAATTCAATGCGAATACCGTACAATGAAAGTTTTCCC
TTGGTTGAAGATGAACGGTGAACTAAACAGTGTGCTTCTTcgcaaatttc
aagaaaatgttttgacaCACATACTCTTGAATCCTGGAGTCAAGCAGACA
AGTCTCATCTCATACTTCAAACTGATTCTCTTCCCTGAAGCCACCATGCG
ATTATTGAAGTTTCTGGAATTGAACAAATCGATAACGAAACATTATTTGG
TTCGAAGAAAGACTTCTTTATTTGGCGAACCACTTTCTCCGTCCAAAGGT
TTATCAGAGGATGACGTGTATTACTTGCCAACCATGTCTACCATTATGAA
CATGACAGATACGAATCGTTGAATGGAAACTTCAGAAACCAAACTTGCCG
ATTCTGCCGTCACTGAGACGACAGCTAATAACAAAGTAACTAGACCAGag
aatcaagtttctaaaaatgAACCTAAAGCTGGATCACAATGTTCTGATAA
AAAACATCCGTCTGAAAACCAACTATTGTCTAAAGCAACGGTTGACGAGA
ACCTAGACCGTGGAGAGGAAGAATTGGCTGAAAATAATAAGATTACATTA
CCTTCATCCAATGATTCAAGCTCTGAAATGCATTCAGTCAACGCACATCT
GGTATCTCATAAGAATCttccaaataaagaaaaaatggaaaaaaagaatC
AAGAAACTGGTACCAGTAGCCTGGAAACGACTGAAAAACAAAAAGAAGAT
CTGACAATCGAAAATCCATTACCGGAAAAAGAGTTACCATTAAAAACGAA
AGAACCTGCTAAAAAGCCGTCAGCCGATAATAATGAGCAGCATTCGAAGG
ACAAAGCACCGGTACCGAAAGGGAAGAAGAAGATCTCACAACGTATTTTA
TTGAGAGACAATAACGGAAGTGACGAACTCCAAATTCAATGCGAATACCG
TACAATGAAAGTTTTCCCTTGGTTGAAGATGAACGGTGAACTAAACAGTG
TGCTTCTTcgcaaatttcaagaaaatgttttgacaCACATACTCTTGAAT
CCTGGAGTCAAGCAGACAAGTCTCATCTCATACTTCAAACTGATTCTCTT
CCCTGAAGCCACCATGCGATTATTGAAGTTTCTGGAATTGAACAAATCGA
TAACGAAACATTATTTGGTTCGAAGAAAGACTTCTTTATTTGGCGAACCA
CTTTCTCCGTCCAAAGGTTTATCAGAGGATGACGTGTATTACTTGCCAAC
CATGTCTACCATTATGAACATGACAGATACGAATCGTTGAATGGAAACTT
CAGAAACCAAACTTGCCGATTCTGCCGTCACTGAGACGACAGCTAATAAC
AAAGTAACTAGACCAGagaatcaagtttctaaaaatgAACCTAAAGCTGG
ATCACAATGTTCTGATAAAAAACATCCGTCTGAAAACCAACTATTGTCTA
AAGCAACGGTTGACGAGAACCTAGACCGTGGAGAGGAAGAATTGGCTGAA
AATAATAAGATTACATTACCTTCATCCAATGATTCAAGCTCTGAAATGCA
TTCAGTCAACGCACATCTGGTATCTCATAAGAATCttccaaataaagaaa
aaatggaaaaaaagaatCAAGAAACTGGTACCAGTAGCCTGGAAACGACT
GAAAAACAAAAAGAAGATCTGACAATCGAAAATCCATTACCGGAAAAAGA
GTTACCATTAAAAACGAAAGAACCTGCTAAAAAGCCGTCAGCCGATAATA
ATGAGCAGCATTCGAAGGACAAAGCACCGGTACCGAAAGGGAAGAAGAAG
ATCTCACAACGTATTTTATTGAGAGACAATAACGGAAGTGACGAACTCCA
AATTCAATGCGAATACCGTACAATGAAAGTTTTCCCTTGGTTGAAGATGA
ACGGTGAACTAAACAGTGTGCTTCTTcgcaaatttcaagaaaatgttttg
acaCACATACTCTTGAATCCTGGAGTCAAGCAGACAAGTCTCATCTCATA
CTTCAAACTGATTCTCTTCCCTGAAGCCACCATGCGATTATTGAAGTTTC
TGGAATTGAACAAATCGATAACGAAACATTATTTGGTTCGAAGAAAGACT
TCTTTATTTGGCGAACCACTTTCTCCGTCCAAAGGTTTATCAGAGGATGA
CGTGTATTACTTGCCAACCATGTCTACCATTATGAACATGACAGATACGA
ATCGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043696XLOC_043696Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070165-proteinTCONS_00070165-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070165-exon-scaffold_514-1491911889:92114..92245TCONS_00070165-exon-scaffold_514-1491911889:92114..92245Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1510915933:92114..92245TCONS_00070165-exon-scaffold_514-1510915933:92114..92245Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1575043694:92114..92245TCONS_00070165-exon-scaffold_514-1575043694:92114..92245Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1491911889:93107..93773TCONS_00070165-exon-scaffold_514-1491911889:93107..93773Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1510915933:93107..93773TCONS_00070165-exon-scaffold_514-1510915933:93107..93773Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1575043694:93107..93773TCONS_00070165-exon-scaffold_514-1575043694:93107..93773Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1491911889:94581..94780TCONS_00070165-exon-scaffold_514-1491911889:94581..94780Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1510915933:94581..94780TCONS_00070165-exon-scaffold_514-1510915933:94581..94780Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1575043694:94581..94780TCONS_00070165-exon-scaffold_514-1575043694:94581..94780Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1491911889:95490..95613TCONS_00070165-exon-scaffold_514-1491911889:95490..95613Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1510915933:95490..95613TCONS_00070165-exon-scaffold_514-1510915933:95490..95613Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1575043694:95490..95613TCONS_00070165-exon-scaffold_514-1575043694:95490..95613Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1491911889:96474..96536TCONS_00070165-exon-scaffold_514-1491911889:96474..96536Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1510915933:96474..96536TCONS_00070165-exon-scaffold_514-1510915933:96474..96536Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1575043694:96474..96536TCONS_00070165-exon-scaffold_514-1575043694:96474..96536Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1491911889:97700..97787TCONS_00070165-exon-scaffold_514-1491911889:97700..97787Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1510915933:97700..97787TCONS_00070165-exon-scaffold_514-1510915933:97700..97787Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1575043694:97700..97787TCONS_00070165-exon-scaffold_514-1575043694:97700..97787Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1491911889:98360..98869TCONS_00070165-exon-scaffold_514-1491911889:98360..98869Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1510915933:98360..98869TCONS_00070165-exon-scaffold_514-1510915933:98360..98869Clytia hemisphaericaexon
TCONS_00070165-exon-scaffold_514-1575043694:98360..98869TCONS_00070165-exon-scaffold_514-1575043694:98360..98869Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_514supercontigscaffold_514:92114..98869 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.01022	7.49039	9.89578	9.88109	2.67317	2.37642	6.05267	7.07627	5.01121	5.831	6.38999	5.25066	6.05234	6.64325	4.77095	5.62784	4.24437	5.70224	2.87342	3.00683	4.02911	4.36606	8.23893	7.88955	9.3111	11.4612	4.63305	5.24119	9.22559	9.62867
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070165 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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