TCONS_00070151 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070151
Unique NameTCONS_00070151
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length582

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070151 ID=TCONS_00070151|Name=TCONS_00070151|organism=Clytia hemisphaerica|type=transcript|length=582bp
GCTGGAACTAACTGGAAAGTCACACTAAAGTACCAAAGGTTCTCTTAGGG
GCACTCCTAACCAGTGACTATTGGATTCTGAAGGGATCTTTGTAGGACAG
TAGTATTACAggcgttgtggtatagtggacatGAACCTTAATTCCTGTAC
AGGCaaccaaggttcgattcccactcacgacAGTTCACAAGtgcaagtga
acaaaccttcgtcccggtcaacccatgccatgttaggggaattgggtagt
cagttcaaagTGCGgacgggatgcttactcaaaagcatctatagttgcga
gaatgggctccagagcctcctgtaactcaaccacAATAGAATAGGAGCac
tggtagggttgggagctttatatattataaagttttttttcatttctttc
ctaTCCATCATTCCATGTTACAGGGGATATTTGGATTCTTTTTCTTGCCA
TAACCAATTTCTTTTTGTCTTGAGTAGTTCTTTAGTACAAAGTATATGGT
TCTCATATTTTCACTTTGTATATCATAGCTTGCCAATTTCTACCACACAT
CTTACAGTGGCTCTTGTAACCATCCCCCctgg
Run BLAST on NCBI

transcript from alignment at scaffold_513:415976..416557

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070151 ID=TCONS_00070151|Name=TCONS_00070151|organism=Clytia hemisphaerica|type=transcript|length=582bp|location=Sequence derived from alignment at scaffold_513:415976..416557 (Clytia hemisphaerica)
ccagGGGGGATGGTTACAAGAGCCACTGTAAGATGTGTGGTAGAAATTGG
CAAGCTATGATATACAAAGTGAAAATATGAGAACCATATACTTTGTACTA
AAGAACTACTCAAGACAAAAAGAAATTGGTTATGGCAAGAAAAAGAATCC
AAATATCCCCTGTAACATGGAATGATGGAtaggaaagaaatgaaaaaaaa
ctttataatatataaagctcccaaccctaccagtGCTCCTATTCTATTgt
ggttgagttacaggaggctctggagcccattctcgcaactatagatgctt
ttgagtaagcatcccgtcCGCActttgaactgactacccaattcccctaa
catggcatgggttgaccgggacgaaggtttgttcacttgcaCTTGTGAAC
TgtcgtgagtgggaatcgaaccttggttGCCTGTACAGGAATTAAGGTTC
atgtccactataccacaacgccTGTAATACTACTGTCCTACAAAGATCCC
TTCAGAATCCAATAGTCACTGGTTAGGAGTGCCCCTAAGAGAACCTTTGG
TACTTTAGTGTGACTTTCCAGTTAGTTCCAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043685XLOC_043685Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070151-exon-scaffold_513-1491911889:415976..416557TCONS_00070151-exon-scaffold_513-1491911889:415976..416557Clytia hemisphaericaexon
TCONS_00070151-exon-scaffold_513-1510915933:415976..416557TCONS_00070151-exon-scaffold_513-1510915933:415976..416557Clytia hemisphaericaexon
TCONS_00070151-exon-scaffold_513-1575043694:415976..416557TCONS_00070151-exon-scaffold_513-1575043694:415976..416557Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_513supercontigscaffold_513:415976..416557 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0951146	0.463759	0.221859	0.105361	0.513069	0.304076	1.10056	0.915853	0.405654	0.297841	0.681432	0.253383	0.256257	0.0656938	0	0.11592	0	0.14637	0.101109	0.105803	0	0.134568	0	0	0.306361	0.0918506	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070151 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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