TCONS_00070113 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00070113
Unique Name	TCONS_00070113
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2510

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_513:397190..405426-

transcript sequence

>TCONS_00070113 ID=TCONS_00070113|Name=TCONS_00070113|organism=Clytia hemisphaerica|type=transcript|length=2510bp
AACGAAACGAAATTATTGATCATCCTAACCAACAAAAAGAAGGCAAGAAA
CGTGATAACAAGAAAATTCAAGAAGAAATTGGAGAAACTGTATTCCTTAA
AGAAACTGAACCTAAACTAAAGACTGCAACATAATGAATGAAGAAGAAGT
TGATGTCAACCTATTTGCTCCGGATGGAGATGAAGACGACTTTGAAAACG
GAGATAGTGGTCATGACCAGATCAACATAAATTCAAAGTTTGCTTTGGTA
AGTCCTAATGCATCAGAATACACATGTCTTGTCAAGAAAGTTCAAGATTT
GATTGAAGAAGGTCAAGGGGAAACAATCTATGAAATCGGTGTTGATGAAA
AAGGAGAGTCTGGCTTGAACGATGAAGATTTCAAGGCTTCGATCGCCACA
CTACAAAGTATTGCTGAACAACTGAATTGCCAAATCAATATGTTACGCGA
AAAAGACATTGAAACACGCAAAACGGCTGAATTTCTAATACGAGGAAATT
TGGTGGAAGAAGATTTCTCTGAAGTTAGAGTTGCAGTTGTAGGAAATGTT
GATGCAGGAAAAAGTACACTGTTGGGTGTTTTGACACACGGCTCATTAGA
CGATGGTAGGGGAACGGCTCGTTTGAAATTGTTCCGGCACAAACACGAAG
CGGAAACAGGCCGGACAAGCAGCGTTGGAAATGATATTCTTGGATTCGAT
TCGAAAGGAGACATTGTAAATAAACCAGATAAGCACAGTGGTGCGTTAGA
TTGGACACAGATTTGCAAAGAATCTTCCAAAGTGGTCACGTTCATTGATT
TGGCTGGTCACGAAAAATACTTGAAGACAACTGTATTTGGTATGACTGGA
CACGCCCCTGATTTTGCAATGTTGATGGTCGGTTCCAATGCTGGGATTGT
TGGTATGACTAAAGAGCATTTGGGATTGGCACTGGCACTCAACGTTCCTG
TTTTTGTTGCTGTAACAAAAATTGATATGTGTCCTCCTAATGTTCTACAA
GAAACCATGAAATTGTTATGTCGTATCCTCAAATCTCCTGGTTGTCGTAA
AATCCCTGTCATCGTTTCCAAtaaagatgacgtcatcgtttcaGCTACTA
ATTTCTCTTCTGAAAGGATATGTCCGATCTTTCAAATCTCCAACGTGACC
GGAGAAAACTTGGATTTGTTGAAAGGTTTTCTCAACCTGTTGAGCGTACG
TGGTCAATACGTTTCGTCCAAACCGCCTCTGTTTCAAATCGATGACACAT
ACTCTGTATCgGGTGTAGGTACGGTCGTCTCAGGGACCACCATGCAAGGC
GTCATCCGTTTAAACGACATCTTGCTATTGGGCCCGGACAGCACGGGAGC
TTTTCAACCTGTACCGATCAAAAGTATACATCGAAAACGTTTACCGGTCA
AAGAAGTTCGAGCAGGGCAAACAGCTTCGTTTTCAatgaaaaagaTCAAA
CGACAAGACATTCGAAAAGGAATGGTACTAGCGGGCCAAGATCTTGAACC
ACGTGCCACGTGGGAATTCGATGCGGACGTGTTAGTACTACATCATCCAA
CCACCATCAGTGCGAAATATCAAGCTATGGTTCATTGTGGAAGCTTACGC
CAGACAGCGACCATCGTCCGAATGGATAAGGAACATCTGCGGACAGGTGA
CAAAGCCTCATGCCGTTTCCGGTTCATGAAATCTGCGGAGTACATAACTA
TCGGAACAAAGATGATATTCAGAGAAGGGCGGACCAAAGCGGTAGGCACT
ATAACAAAATTACATGAGGAAGTTGCAGGGCGTAGCACCCATAATACACG
CCAAAATAAACAATTCAAAGCTCTCATGCACCAGCGTGGAAAGGGCGGTA
ATCGTAAAACTCCGGCGCAGAATAAGCCGCCACAAGCAGCCGCAGCTGCA
GCTACGGCGTCTGCGAAATAGCTGTTCTGATTTTATTTTACACTCTTGCT
CCTTTTTAgtatctttttaaaatattttatattatatttgctaagctttt
atatttttttttttgtgaagaGTAGATTATTTTTTAGGTATTTTCTTGCT
CATAGTCACAAGTGTGGCTTGTAGGTGTTTTATTTACTTACTAGGTGTTG
ATTTTTGATATTCATGACTTGATATGTCATCTTAAAACTCACTTAAAGGC
attgaaaatcgaatttttaACAAGTGATCTAGGTACGGTTTTTTAGGTCG
TTCCTAAAAATATAGCTCTGGGGTCACATTTGCCGGATCTAGAACTTTCT
ATGATTGTTTATCTGTATTGTTCGAAGGTCAGTACCTTTTATTCAGAGCT
AATTACAACTAAAAGTTAACCCCTACACAAAAAGGTTgaatatgaaaatt
tgtttttgattatCTTGTGTTTTATTATGTAGATATTTTATATCATAATA
ACTTGTGGTATTTTTAATTAAggtatttttgtgatttttgttgttttatg
aaacaaaaagacTACTAAAAACTGAAACTACACTCTTAGtagtgaaaaaa
tcaattttcc

Run BLAST on NCBI

transcript from alignment at scaffold_513:397190..405426-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00070113 ID=TCONS_00070113|Name=TCONS_00070113|organism=Clytia hemisphaerica|type=transcript|length=8237bp|location=Sequence derived from alignment at scaffold_513:397190..405426- (Clytia hemisphaerica)
AACGAAACGAAATTATTGATCATGTAGTTTTCATTTCAGCATAAATGTTA
TGAGGTATTGAAAGAGTCCAAATCATGTTTTATATTTCAAATATAGATGA
TTTTCATACATATTTCTTTTAGCCTAACCAACAAAAAGAAGGCAAGAAAC
GTGATAACAAGAAAATTCAAGAAGAAATTGGAGAAACTGTATTCCTTAAA
GAAACTGAACCTAAACTAAAGACTGCAACATAATGAATGAAGAAGAAGTT
GATGTCAACCTATTTGCTCCGGATGGAGATGAAGACGACTTTGAAAACGG
AGATAGTGGTCATGACCAGATCAACATAAATTCAAAGGTAGGTGGTTTGG
TTCACAGATATCTTATATTTAAAACACTAATTATTGGCTACTTCGCCCCT
AGATGAAGCAAAATAATCCATCTTGAATGAAGTGGCGCCACAATTTAGCT
TGCGTGATCCTTGAAATATTGAAGTTATTACAGTGTCAAAAAAACTGACA
GTGAAAACCATGGTTTCTACTGCAGTCTACTTTCAGCAAAGATGGCTTAA
CCTGTTTTTGCTTGGGAAAGATAGACTAGCTCTATCTAGTGTTTTAGATA
AGATATCTGATGGTTTGTTTGTATACATGAACCTTAAAGGTTCCCGCCTC
ACTGCTTTTATCAGTAGTTCACTGAAATTTTTTTCCAAATTCATACCAAA
TCCCACAAAATTTTAAGGTTTTGAGACTTTTACACTCGACTTCCTTTTTT
TCTAATTCCTCAGTTTATCAGGGACACGACAGTTGATGAATTGAGGCAAA
GACCGTACAAAAAACTTGAAAATTCCTGATTCCCTTTAACTTTTATTTCA
CTTGAAATAAATAATATTATTATGAAATATATAAAATAAAATCCTTTATC
CTGCATCAGTAAGGTTCTAGCGATTCCATCATTCCATTCCATCTCACGTG
GAGGTGGGATATAAACCGTATCTGTCTTCCTCGCATTCGATTGAGAAAAT
TGCATATTGACGAATGCGCTTTCAAATGTTTTGCTCAAAATTCGAATGTT
TTGTTTTGAAAAGACAGAAAAAATAAAACAAGGGGAAAATACATAAATTG
TAGCGATTGAGAATGTTTGTGTCAATAGGATGCAGAAAATCTTTAAGTTA
TTTTGATTTTTACTTTTCTTCGGCGGATATGGATTGAGCAAGACTAGGCA
AGCCTCGCCACCAATACGGTTTTTACTGACCCTGTATATCCTGTATCCCA
CCTTGAGAAGACCGTGTAACTAAATATTATTAATGTAGTTCTCCAGTGAT
ATTCCATTTATATAACACAACATGTTTGAGTTAACAGTGGTTTTAGGAAG
ATTTTCAAAAGAAACTCGGCTTAAACTTGGCACACAGGTTCCATGGGTTG
TTTTGAATATCTGGCATTTCTTTTTTTTTCATTTTACAGAAATTTTGATT
TTGGGGCCCTAGGCCGAGTTTTTTTTATTTGTTTTGTTACAATTGAGCCT
AGGAATATCTTTAAGCTACTGAAGTTGAGCCCAGTGCGTTGCCCACGTTC
GACTATTTTAAAGAATTATCTTATTTTATCTTAACATTTTAGTTTGCTTT
GGTAAGTCCTAATGCATCAGAATACACATGTCTTGTCAAGAAAGTTCAAG
ATTTGATTGAAGAAGGTCAAGGGGAAACAATCTATGAAATCGGTGTTGAT
GGTAAAAACCAGCAGTTTACTTTTTAGTACTTTTTTATATCAAATCGAGG
GCCTGTCGCTTTTGACAGAATTCGCTTCAATTATTATGGTATTATTTCTT
TCGACTTTTTATGGGTTAATAATAGAAAAATCATAATTTTTGGAAAAGAG
TATTTATTAAACAACTTGACTTTTAGGCTTTTGTGTTTTTTAGTATGAGG
TCTTGTTAACCGGTTACTTTTTCGAAGAGGGCTACACGACTTTTTGCGCA
ATGCAATTGGTTCTTTTCGCATGACGACGGGCCTACATTGTCCAGAGTTG
CCCGTCGTTAGGAAAATTCATTGTGATGTCACTTTTTCAAAGGAAAATGA
ACAATGGGTTGACATCATTTCTCTCATTTTTTATTTCTGACGTCAGAAAT
TATAAGAATTTTTGATCTCTTTTCACTTGTTTTTTTCGCTTTATTGCACT
ATTTTCCCTAGATATATCGCTAAAAATCAATCGAAGCTGAAGGAAATGAT
TAACAAATACAATAATGACCGGTTTTTTCGGGCTGTACTGAAAATATAGC
CCTCGGTCAATGCAACAACCTCCCAAGCTCGGTCGTTACTTGACCTCGGG
CAATATTTCTCAGTGCAGCCCTCACTAACCGTTCATTATTGTATTATTAC
TGTATTATTTCTTTCATAGAAAAAGGAGAGTCTGGCTTGAACGATGAAGA
TTTCAAGGCTTCGATCGCCACACTACAAAGTATTGCTGAACAACTGAATT
GCCAAATCAATATGTTACGCGAAAAAGACATTGAAACACGCAAAACGGCT
GAATTTCTAATACGAGGAAATTTGGTGGAAGAAGATTTCTCTGAAGTTAG
GTAAATTATGAACTTGAATTTAATTTTTCGTTCGTAAACCTGTAATGGAC
TTATTTTACTATTTAGCTGTCCCATTAGTGGCTGGGTAGCTCAGTTGGTA
GGGCATTCGCCTTACGATCCTAGAATGCACCCCCCTGAGCTTAGGGGGGG
GGGGCTAAACCATTTTTGCTTGATTGAGGGCGGAATTTTTCAAAAAGTAN
NNNNNNNNNNNNNNNNNNNNNNCTTAATTATCATAGAATGCACCCCCCTG
AGCTTAGGGGGGGGGGGCTAAACCATTTTTGCTTGATTGAGGGCGGAATT
TTTCAAAAAGTACTTGGGGCTAGCTTGCTAGGGGAGGGCTGAGTGTTGTG
TAATAGAACTGGGGGCAGAGATGATAGGTAACATAAATTTTAAATTATGT
TAAGAATCTATGCTGTGGCGAAGGTTTTAACCCTCTTGAAAAGATTTATA
GAGAATTTCCATGCAAAATTTCTTTGATATTTTGTATGATGTCTGACAGT
CTGAAGTATCCCTGTTCTAAGTAGTATTTTTCATTCAAATATCTTGCTTA
TATTTTTTTTCACTTCAGAGTTGCAGTTGTAGGAAATGTTGATGCAGGAA
AAAGTACACTGTTGGGTGTTTTGACACACGGCTCATTAGACGATGGTAGG
GGAACGGCTCGTTTGAAATTGTTCCGGCACAAACACGAAGCGGAAACAGG
CCGGACAAGCAGCGTTGGAAATGATATTCTTGGATTCGATTCGAAAGGAG
ACATTGTAAATAAACCAGATAAGCACAGTAAGGAGACACAATCCTTGCTC
AATATAATTATAGTAATAGAATGCATTTTCATAAATCACATCGAAGGCCT
GCTAACATTAAGACTATATGTCAATGCAGCGTTTTTAGATACCTTTTCTG
ATCTTTTATTGTCCATTAATTATAATATTTTTATATTTCCATACTCTCTG
ATTCAGATGAGTCATAAATTGTAGTCTTTCAGTATGAAATAAATTCTCAT
GTCAAACAGTGTCAAATAGAGAAAACAAACGGGGAAGAAAACTGGAAATA
TAATGATTTTTTTCTTTGATTCCACACAGGTGGTGCGTTAGATTGGACAC
AGATTTGCAAAGAATCTTCCAAAGTGGTCACGTTCATTGATTTGGCTGGT
CACGAAAAATACTTGAAGACAACTGTATTTGGTATGACTGGACACGCCCC
TGATTTTGCAATGTTGATGGTCGGTTCCAATGCTGGGATTGTTGGTATGA
CTAAAGGTATTCAAAACAGACATTTTTCTGATACATTAGATAATTCAATT
TCTTGAATGTTCCATGAGGATGTTTGCATAATGACGGTTCCGTTCTTTCC
CAAACGAAATTGAACAATTCTTTTAGTTTATTCTTGGAATTCATCGATGT
TTTAACCAATAGATCGGCTTGTTTTTGTTTTGGAGCAGAGCAGAACCGTT
TTGCGCGACATGGTATTTCCCGAAAAATATTGCCATCTAATATCATGGCT
CCGAATGGGGTTCTAGGTCCCCCCCGACAAATTTAGGTCCCCCCTAAGTT
TTAGGTCCCCCCACTTTTCAGTAAGGTTCAGGTCCCAGTTGAAATCTAAA
GGTTCAGGTCCCTACAAAAAGTACTTTCAAGGTTCAGCAGGTCCCATCAA
AGAAAAATAATTCGGCAATTCAACAAAGCAAAACATTCGAATCGCTTCGC
AAAAATGGAATGTCGTTTACCACCCCCTCTCGCACGCAGATAAAAATAAA
ACTGTAAAATATTTCACAACAGAACATTAAAACCAAACAAAAAAATATTT
CTACGAGTTCTTAATTATTGCAATTAGCCCCCAGAACTTTTGTACAGCCC
TTCAGGTCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGCGG
AGCCATGAGCCAAAAGTAATGTTTCATTAAAGAATGATATTCTAACAGGT
GATGGAAAATTTAAATTCATCCCATAACAATAACCCACCAATACCAAACA
TTACTCGTCCCTGTGTTTACCTACAGTTTAAAAATGTGGGATTATGGTGG
CGTTGTTGACCTCAAATCGGCGTTGTTTCTGGTCGTTTTGACTTTAATTC
TTTTTGGTAAACAATGTCTTTGACACCTTTTTTATAGAGCATTTGGGATT
GGCACTGGCACTCAACGTTCCTGTTTTTGTTGCTGTAACAAAAATTGATA
TGTGTCCTCCTAATGTTCTACAAGAAACCATGAAATTGTTATGTCGTATC
CTCAAATCTCCTGGTTGTCGTAAAATCCCTGTCATCGTTTCCAATAAAGA
TGACGTCATCGTTTCAGCTACTAATTTCTCTTCTGAAAGGTGGGTGGTGT
TGTATATCACAAATTCTTCATCTACATTTCTTTTTTATAAAAACCAGTAA
TTTTTTTATTGAGGCGCGGCTGTTGTTTATTATTTGTTCGTCATTTTGTT
CTTAGTCTGTTCTTAGATATTGGGCAAAATTATTTTAGGCTTTATATACA
GTCTTTTGCTACCTTGACCCTTAAATTACTTCAAATCCAGAAATTATAGG
CTCGACATTGCTCTTAAATTGTTCTAAATTTTTGATGATTATGAAACTCA
TTGCTCTTATAAAGTTACTCTTATAAAGAAAGGAGTTTACCCTATTGGCT
GACTTTGACAGTAATGTAAAAATTACCACTCGCTAAATCGTTTAGATTCT
TTAGGGTAGTGGCGTGGATTGCTAAGTTGCAAATACTGATAAAGACTTTA
AATCTGACAGAGATTGTTGATCAAGGAAACAGAATAGATATGCTTTGAGT
TTTCATAATTGTGTGATATATTTCATAGGCGAAGCGAGATACCCTGCAAA
ATTTATGAGGGAGTGCAGACGTTTATGACATATTCATTATCTTTTGATAA
AACAAAGACAATAATTACAATGTCGTAAAAACCGCTCTCATCCATAAATT
TTGCAGAGTATCTCGCTACGCCTATGTATTTGCCACTTTCTTAGGATATG
TCCGATCTTTCAAATCTCCAACGTGACCGGAGAAAACTTGGATTTGTTGA
AAGGTTTTCTCAACCTGTTGAGCGTACGTGGTCAATACGTTTCGTCCAAA
CCGCCTCTGTTTCAAATCGATGACACATACTCTGTATCGGTAAGTACACG
TTTTTTATAAGATTATCCTAAATTAATGAAGCCTTTGGATGTTCTTATTC
TTTTGAGTTTTAAGCTTGAAAATGTTCTTAACATGTTCTTATTAACACTT
ATTATCTTTTTACCCATTTTCCTAAGAAATCGCGTTTTTAGAGTCCACAA
AGCCTTTAATTGTTCTTAACTTGTTCTTAATATTTTGGCCAGCGAAGTCT
TATGTTCTTATATAGTTTGTTCTTATGAAAAAACGTGTATCCAAGCATCA
AAATAACTTAGACATTACTAATCACTGCTCAAAGTTTAACGCTAGATGGT
ATTTGGTATTCCGATACTCGGTCCGAAAGTCAATATCTAACTTCTTACTG
CTTGCAAAAACTGTTTCTCTTTAAACAATACATCTGGTACATACATCATC
GTCTACAAATATTTTGGCCGGTTATACAAATGACTGTATAGTATAGACCA
TATATTCTTTTGTCAGTATAGTGGTCTTAAGAATCCTTCAAAAAATCTCT
TCTTTCTTCTCGCCACAGGGTGTAGGTACGGTCGTCTCAGGGACCACCAT
GCAAGGCGTCATCCGTTTAAACGACATCTTGCTATTGGGCCCGGACAGCA
CGGGAGCTTTTCAACCTGTACCGATCAAAAGTATACATCGAAAACGTTTA
CCGGTCAAAGAAGTTCGAGCAGGGCAAACAGCTTCGTTTTCAATGAAAAA
GGTATTTTTTATTCTGAACACGTATCCAGAATTCTTGAATCGGTCTACGT
TTTGAGAGTTATATATTAAGTTTTATCGAACCATGCTTTGAGTCCTTATA
GTTGAGCATCTTACGCGAAGATATTTTTGTAACACACTAGTAGGTATATA
GCATTGCACCGAGTAGTTCGAAATTATTACATTTTCTGATCAAATTGCCC
CCGTACTCTGACGTCCACTTGAATTTCAGTTCATTTTGTAACTTTACCTA
ACTTGCTGTTTTGAAATAGCTTGTAAAGAATGACACTTTTTACTGTTTTT
GTTTTTCATCATTTTCAGATCAAACGACAAGACATTCGAAAAGGAATGGT
ACTAGCGGGCCAAGATCTTGAACCACGTGCCACGTGGGAATTCGATGCGG
ACGTGTTAGTACTACATCATCCAACCACCATCAGTGCGAAATATCAAGCT
ATGGGTACGAGACATTCATTACTTTATCCACTTCAGATAATCCATTTATG
GATACTCATTTACTATACTTGAGCAACATGATTTTTTAGCTCAGAAGTTT
GAAGTAGAATTCGGATAGAAACCAAAAAATAGTTCAAAATGTATAATGTA
TAAGGATAAAAGCTAAGGTTTTTGATTCATAGAGATGGGGTAACGTTCAC
TTCTAGTATATACATCTTTCCTGTTTCTCGAATTTTATTCTCCTCCTTTT
GATACAGTTCATTGTGGAAGCTTACGCCAGACAGCGACCATCGTCCGAAT
GGATAAGGAACATCTGCGGACAGGTGACAAAGCCTCATGCCGTTTCCGGT
TCATGAAATCTGCGGAGTACATAACTATCGGAACAAAGATGATATTCAGA
GAAGGGCGGACCAAAGCGGTAGGCACTATAACAAAATTACATGAGGAAGT
TGCAGGGCGTAGCACCCATAATACACGCCAAAATAAACAATTCAAAGCTC
TCATGCACCAGCGTGGAAAGGGCGGTAATCGTAAAACTCCGGCGCAGAAT
AAGCCGCCACAAGCAGCCGCAGCTGCAGCTACGGCGTCTGCGAAATAGCT
GTTCTGATTTTATTTTACACTCTTGCTCCTTTTTAGTATCTTTTTAAAAT
ATTTTATATTATATTTGCTAAGCTTTTATATTTTTTTTTTTGTGAAGAGT
AGATTATTTTTTAGGTATTTTCTTGCTCATAGTCACAAGTGTGGCTTGTA
GGTGTTTTATTTACTTACTAGGTGTTGATTTTTGATATTCATGACTTGAT
ATGTCATCTTAAAACTCACTTAAAGGCATTGAAAATCGAATTTTTAACAA
GTGATCTAGGTACGGTTTTTTAGGTCGTTCCTAAAAATATAGCTCTGGGG
TCACATTTGCCGGATCTAGAACTTTCTATGATTGTTTATCTGTATTGTTC
GAAGGTCAGTACCTTTTATTCAGAGCTAATTACAACTAAAAGTTAACCCC
TACACAAAAAGGTTGAATATGAAAATTTGTTTTTGATTATCTTGTGTTTT
ATTATGTAGATATTTTATATCATAATAACTTGTGGTATTTTTAATTAAGG
TATTTTTGTGATTTTTGTTGTTTTATGAAACAAAAAGACTACTAAAAACT
GAAACTACACTCTTAGTAGTGAAAAAATCAATTTTCC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_043652	XLOC_043652	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_513	supercontig	scaffold_513:397190..405426 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000562986	5.78013e-06	2.23551	2.77814	5.77203e-07	0	1.25125e-05	1.22428e-08	5.33785e-05	0.000222768	2.44978e-06	9.81773e-06	4.88724e-07	0.344738	1.70076e-06	1.62763e-05	0.00101883	0.00163459	5.93483e-05	2.23386e-06	1.55767	2.70031e-07	0.00492382	0.016677	0	0	0.00194876	2.76229e-05	0.000204987	2.83598e-06

Blast

[Close]

BLAST of TCONS_00070113 vs. Swiss-Prot (Human)
Match: GTPB1 (GTP-binding protein 1 OS=Homo sapiens GN=GTPBP1 PE=1 SV=3)

HSP 1 Score: 712.22 bits (1837), Expect = 0.000e+0
Identity = 369/560 (65.89%), Postives = 455/560 (81.25%), Query Frame = 2

Query:  179 DEDDFENGDS--GHDQININSKFALVSPNASEYTCLVKKVQDLIEEGQGETIYEIGVDEKG-ESGLNDEDFKASIATLQSIAEQLNCQINMLREKDIETRKTAEFLIRGNLVEEDFSEVRVAVVGNVDAGKSTLLGVLTHGSLDDGRGTARLKLFRHKHEAETGRTSSVGNDILGFDSKGDIVNKPDKHSGALDWTQICKESSKVVTFIDLAGHEKYLKTTVFGMTGHAPDFAMLMVGSNAGIVGMTKEHLGLALALNVPVFVAVTKIDMCPPNVLQETMKLLCRILKSPGCRKIPVIVSNKDDVIVSATNFSSERICPIFQISNVTGENXXXXXXXXXXXSVRGQYVSSKPPLFQIDDTYXXXXXXXXXXXXXMQGVIRLNDILLLGPDSTGAFQPVPIKSIHRKRLPVKEVRAGQTASFSMKKIKRQDIRKGMVLAGQDLEPRATWEFDADVLVLHHPTTISAKYQAMVHCGSLRQTATIVRMDKEHLRTGDKASCRFRFMKSAEYITIGTKMIFREGRTKAVGTITKLHEEVAGRSTHNTRQNKQFKALMHQRGKGG 1849
            D D  E+G++  G  ++++ SK  LVSP + +Y  L++++ + ++EG GETIY IG    G E GL++ D +AS AT++S+AEQ+   + +LRE+     +  ++L+R  + + DF EVRVAVVGNVDAGKSTLLGVLTHG LD+GRG AR KLFRHKHE E+GRTSSVGNDILGFDS+G++VNKPD H G+L+WT+IC++S+KV+TFIDLAGHEKYLKTTVFGMTGH PDF MLMVGSNAGIVGMTKEHLGLALALNVPVFV VTKIDMCP N+LQET+KLL R+LKSPGCRKIPV+V +KDDVIV+A+NFSSER+CPIFQISNVTGENLDLLK FLNLLS R  Y   +P  FQIDDTYSV GVGTVVSGTT++G+I+LND LLLGPD  G F  + +KSIHRKR+PVKEVR GQTASF++KKIKR  IRKGMV+    L P+A+WEF+A++LVLHHPTTIS +YQAMVHCGS+RQTATI+ MDK+ LRTGDKA+  FRF+K+ EY+ I  +++FREGRTKAVGTITKL +     +T+N+  N + + +  Q  K G
Sbjct:   43 DSDCSEDGEALNGEPELDLTSKLVLVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQIEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQ-----TTNNSPMNSKPQQIKMQSTKKG 597

The following BLAST results are available for this feature:

BLAST of TCONS_00070113 vs. Swiss-Prot (Human)

BLAST of TCONS_00070113 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GTPB1	0.000e+0	65.89	GTP-binding protein 1 OS=Homo sapiens GN=GTPBP1 PE...	[more]

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TCONS_00070113 (transcript) - C. hemisphaerica