|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070101 ID=TCONS_00070101|Name=TCONS_00070101|organism=Clytia hemisphaerica|type=transcript|length=1081bp
CTATTGAAACCAAGTAGATTTGTAGCCCTTTTGCGCTTCTTTTCTTTGCA
ATTCCAAAGTCGTAAGAGATAACCTTTTTTCAGACACCCCTAGATTTCAT
CCACCTTGcgaaaaatggtatttttctTCCATATCCGTATGCGGCGTTAA
ATTCAGGTGACCCAAACCTCATTTTTCTCAAAGTTAATTACACCCTTCTA
TTATTTGTATTATCAGGTGATATCAAACTTAACCCTGGTCCAAGAactga
agaaaacaaaaagttatcagaaaaatgtggaaaaatttaacaaaattgtt
CTAGGTAACTTTAATCAACGCCATGATATGTTTGGGCCATGTACAGATAA
ACAGTCTGCTGCTATTACTCTTTTCTCTGTATGTTGGACAAAGGTCAGAA
ATATCAACATTTGGAAGGATCATGATTTAGACTACATTTTGCACAAAGGA
GACATGATTTTTAAAGAAACTGGTATAAGCCATGCATTGCATGTAAACGA
ATTACCTCAGCAAGTTAATgttgaaaatattgtttttgatGTAACAATTG
TCAGTCAAGTTGATGGACATATAGAGAATATATCAGATTCGGATGACAGT
AGTGAGgttaacatttttttggatgaaaacctcttttttagtgaaaaagt
aaCTGGggctattatttttttcaatggaCCTTGTGTCTCGATTTTAAAAG
AAAGAGTGAAAGTAAGaagtcataaaaagttttatttatttgattctcaT
AGTCGTGATACTGAAGGCAGAGTAGTCGAAGATGGTACTGGTAAATCAAT
CTTAATAGAAGTatcaacaacaaaatatataTCAGATTACATTTTCACTA
CTTATGGATCACAGAAGTTTGAAGTTGTTTATGTTGAGACAAACATTGAG
GAAGAGAGCAAATGCAGTTTAGTTAAATCTTTGACGAggtttaaaagaac
aaaactttACACAAGTCTAATTCAAAAAGGAGTTAATGGCaataataaag
aaaacaataaaagacACTACTCAAGTCATGCATATGAAATtaagcaagca
aaaaaaaggGGTTACGAAAAAAATGTAgatg Run BLAST on NCBI transcript from alignment at scaffold_513:265445..266525- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070101 ID=TCONS_00070101|Name=TCONS_00070101|organism=Clytia hemisphaerica|type=transcript|length=1081bp|location=Sequence derived from alignment at scaffold_513:265445..266525- (Clytia hemisphaerica)
CTATTGAAACCAAGTAGATTTGTAGCCCTTTTGCGCTTCTTTTCTTTGCA
ATTCCAAAGTCGTAAGAGATAACCTTTTTTCAGACACCCCTAGATTTCAT
CCACCTTGCGAAAAATGGTATTTTTCTTCCATATCCGTATGCGGCGTTAA
ATTCAGGTGACCCAAACCTCATTTTTCTCAAAGTTAATTACACCCTTCTA
TTATTTGTATTATCAGGTGATATCAAACTTAACCCTGGTCCAAGAACTGA
AGAAAACAAAAAGTTATCAGAAAAATGTGGAAAAATTTAACAAAATTGTT
CTAGGTAACTTTAATCAACGCCATGATATGTTTGGGCCATGTACAGATAA
ACAGTCTGCTGCTATTACTCTTTTCTCTGTATGTTGGACAAAGGTCAGAA
ATATCAACATTTGGAAGGATCATGATTTAGACTACATTTTGCACAAAGGA
GACATGATTTTTAAAGAAACTGGTATAAGCCATGCATTGCATGTAAACGA
ATTACCTCAGCAAGTTAATGTTGAAAATATTGTTTTTGATGTAACAATTG
TCAGTCAAGTTGATGGACATATAGAGAATATATCAGATTCGGATGACAGT
AGTGAGGTTAACATTTTTTTGGATGAAAACCTCTTTTTTAGTGAAAAAGT
AACTGGGGCTATTATTTTTTTCAATGGACCTTGTGTCTCGATTTTAAAAG
AAAGAGTGAAAGTAAGAAGTCATAAAAAGTTTTATTTATTTGATTCTCAT
AGTCGTGATACTGAAGGCAGAGTAGTCGAAGATGGTACTGGTAAATCAAT
CTTAATAGAAGTATCAACAACAAAATATATATCAGATTACATTTTCACTA
CTTATGGATCACAGAAGTTTGAAGTTGTTTATGTTGAGACAAACATTGAG
GAAGAGAGCAAATGCAGTTTAGTTAAATCTTTGACGAGGTTTAAAAGAAC
AAAACTTTACACAAGTCTAATTCAAAAAGGAGTTAATGGCAATAATAAAG
AAAACAATAAAAGACACTACTCAAGTCATGCATATGAAATTAAGCAAGCA
AAAAAAAGGGGTTACGAAAAAAATGTAGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070101-exon-scaffold_513-1575043694:265445..266525 | TCONS_00070101-exon-scaffold_513-1575043694:265445..266525 | Clytia hemisphaerica | exon |
| TCONS_00070101-exon-scaffold_513-1510915933:265445..266525 | TCONS_00070101-exon-scaffold_513-1510915933:265445..266525 | Clytia hemisphaerica | exon |
| TCONS_00070101-exon-scaffold_513-1491911889:265445..266525 | TCONS_00070101-exon-scaffold_513-1491911889:265445..266525 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_513 | supercontig | scaffold_513:265445..266525 - |
Blast
The following BLAST results are available for this feature:
|
