TCONS_00070096 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070096
Unique NameTCONS_00070096
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length164

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070096 ID=TCONS_00070096|Name=TCONS_00070096|organism=Clytia hemisphaerica|type=transcript|length=164bp
gtaCCCCTTGGTTTATTATTTAAAGCGGAAAACATCACCGGAGAAATGGT
CGATATTCTGAAGACACTCACAGACAATTATGTCCCAAAGACAAAACTTG
AAAATGATACCCTAGAGGTAATTCGATCCATCATACTTGGAGGGGATTTG
TTGACAGAAGAAAG
Run BLAST on NCBI

transcript from alignment at scaffold_513:238133..238504-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070096 ID=TCONS_00070096|Name=TCONS_00070096|organism=Clytia hemisphaerica|type=transcript|length=372bp|location=Sequence derived from alignment at scaffold_513:238133..238504- (Clytia hemisphaerica)
GTACCCCTTGGTTTATTATTTAAAGCGGAAAACATCACCGGAGAAATGGT
CGATATTCTGAAGACACTCACAGACAATTATGTCCCAAAGACAAAACTTG
AAAATGATACCCTAGAGGTAATAAATCAAATATGTATGAAAATCTCAAAA
TTAATCGAAAAATAAACTGTTCCATAAATAATAATATTTATACGATGCAT
AATAGTATGAGCAGTGTCTCCGAAAAACAACTAAAAAAACTAAAAATAAG
GATTTTTTTCCAGACACTGTATGAATACAAAATAAGAATACTGTTTTAAA
ATTTGTAATGTTTTTTTGAATAAAGGTAATTCGATCCATCATACTTGGAG
GGGATTTGTTGACAGAAGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043645XLOC_043645Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070096-exon-scaffold_513-1575043694:238388..238504TCONS_00070096-exon-scaffold_513-1575043694:238388..238504Clytia hemisphaericaexon
TCONS_00070096-exon-scaffold_513-1575043694:238133..238179TCONS_00070096-exon-scaffold_513-1575043694:238133..238179Clytia hemisphaericaexon
TCONS_00070096-exon-scaffold_513-1510915933:238388..238504TCONS_00070096-exon-scaffold_513-1510915933:238388..238504Clytia hemisphaericaexon
TCONS_00070096-exon-scaffold_513-1510915933:238133..238179TCONS_00070096-exon-scaffold_513-1510915933:238133..238179Clytia hemisphaericaexon
TCONS_00070096-exon-scaffold_513-1491911889:238388..238504TCONS_00070096-exon-scaffold_513-1491911889:238388..238504Clytia hemisphaericaexon
TCONS_00070096-exon-scaffold_513-1491911889:238133..238179TCONS_00070096-exon-scaffold_513-1491911889:238133..238179Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_513supercontigscaffold_513:238133..238504 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070096 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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