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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070076 ID=TCONS_00070076|Name=TCONS_00070076|organism=Clytia hemisphaerica|type=transcript|length=2949bp
tagcgatgaaatttgtttgaaaacgaggacaacaataaatttatgcatct
cgagaagagtgtattcaaAAGAAACTTTCGTTATTGCGGCAATTCTCATA
CTTCCCAACTTCAAATTAGGGTAGATACGATGAGGGATAATTTTTAGAAT
CCATCAGGGGAAGTCtatttatttttgtgaattaATTTCAAGAAATCCAA
TAAGTAAATTTTAGGATCAATATGTTCAAGAAAGCGCATCCAAAGTTCCA
ATAAAAAGAGAAACGTATAGttcattaaaaaatttagagaataaatatac
atgtttttttctatatgcttaacgtttataagcacatgcagactcagttt
ttggtacccaACCAATGGAAGCCTGATAAAGGGGcggacacttgcttata
aaaaaacatgtattttaaTAAATtggtactctcgggtgcctaataaacgt
acagaccaaaataaacgtacagggagGGGGAtgaaattggaattaataaa
cgtacaggctgaaatagACGTACTGgcgagaaatcagagctaaaataaat
aaacgtacaggctaaaataaacgtacagggaaaaatctaccattttttta
aaagttgaacATCCAGGTCGAAACGACTGACTTAAAGTATAAGGAATATC
TCTTATAGAGCAATGACAAGTACTTAAATAATCTTTTATTACTGTAAGTA
ACAAATAAATTAATCGAGTCAATACTTTTTATCAGTTTTTAGAAGAGAAA
GTATcttgaacaaattttttccaGTAAGAATCGGGCAATATTgggtcaaa
ataaataaacgtacaggagggaataaacgtacaggcgggaaaattcttca
aaataaataaacgtataggtcctaataaggtgcgtacaggcgggaaattt
gacacgaaaaaaataaacgtacatgtacgtttattaggcacccgagagta
ctgGCCAAACAATTTAGAAACAAATATTTCTATACCCATGCTCCTTCCCT
TCTGGAAACACATTTGTCTTAGGTATCGAGTTTCAATGGATACATTACCT
GAACACATTCTCCTGCACTTATGAGAATCCTGGGGGAGGGGATTTACTTA
GGCataatgggtgccgggtatgtgcgagccataagggtcccctTTTTTAC
ACGCTCGAAAGTCCCTCAAAACCAGCTCCCTCTTAAGGTCATATAAATTC
TTGGAATTTAgtctaaaatttgaaatttttggctgaattttttggggaat
agtctctctaagggtggaaGAAAACGtcaaataataaagaaaattcaaga
ttcagtctctgtaagggtcgattttcgaacttcagTCGGATATACCCGTC
ATCTCCGGGGACCAACGGATAGGAATTTTCTGTTGGTCCCAACACAATGA
GCTTTagtcttttaaaaataaaatataggAATTATGAAATTATGTTAATT
ACGAAAATAAATATACAGATACCAAATTCAAGTTGAGTTATTTGCTTTCA
ATTTACAGTTTGCTTACTAtcagttttgttttttcaatCATTCCAAAGGA
CTTGTTGAAATACTGTACTACATCCCTCCATACTTCAATATAATCATCAg
acatttttcttttatcctcGCCACCAAAAAAGACCATAGTCCCTGGTAAG
GGTACTAGTGGATGTTTATCGTAAAGGCATATAGGAAGATAAGGCAGCTC
GATTAAATGGCCCATATTTTCATATCTGATAATTTGATAGTTGGTTTTAC
CAACTTTGTCCATCTTCTCTTTTGCAAGTTGTGCATATCTTTCGGTTGGC
CAATTGGCATCTCTCCCACTTACAATAACAAGGAGGTCTGCCTTTGATCT
CTCAAGTTGATGTATGGAATCTGGATGATCAATGGGATCATTGACACAAT
CTAAAATGCTAGCTATATTATCATGAATGAACTTCAGGCTCGCAGGATCA
GCTGGGATCATCTCTGTAACTTCACCTTTATAGATTGTTTGTGTGGCCAT
AGACGCTATACAACCATTCATGCAACACACAGCTTTGATTTGTGGTAAAT
GTGACATCATTGCGTAAGCGATATCACCGCCTTTTGAAGATCCTAAAACA
CCAATTTTCTCTGGATCCACAGAGTCATGTTGCCGTAGAAATTCAACTGC
TTCTTCAAAATACTCGATTCGTATCGGTGTTTCTGTGTACGTTTTTGGTA
AACCTTCAACTCCAAAGAAAGCCAGAGCTAATGTAACGAAGCCTTGGTGA
GCCAAGTATGAAGCAAAATGCTCTTTCACGTTTTTCTTCTTATTACCACC
AAACAAAGTGATAATGGCAGGGGCTTTTGTAGCACGCTCTGGCACAAAAA
GAGTccctttaaaattgaaattttgtaaattaattCTTTCAATGTTGCGA
GCTAAATATCGTGTAATCTGGGCTTTAGCAATTGAAGTCTTACCTTCAAA
CTTGTCAATGTGACCATTATAAAATCCAAAACAAAATGTTAAGTCTTGTA
AACCGTTGACGAAAGTGGCTGTAGGAAACCCTTTCCCTTGTTTTTCCATT
GACCAAAACAACCCCATATCTTCAATACCAGTATAAGTTCCACCAACAGA
TTcatttgttttcaaatcaaaacaaccatCTTTGTTTGTGTAAATGTGTG
CATAAGATTGAAAATCGAACCCTTCTTCTGGGCAAATTAATGTACTTTGT
ATTGTGAAAGGAGAATCGGGTTTGAATCCGTTTCCGATGATTTGTACTTT
CTCAGAAGTGTGAGAGGTAGCAGGACTTGCaattattttgtttgatttcg
TGAAAGAAGTGCTGAAGCATCTTTTTATTATTcgattcattttatttttt
gctttttagtcctgaaaagaaaaatgagggaaaaatacaaaaagagtTTA
CTGAAAAAAGATAAGCAAAATAAAAACTCCTCCGAGGGAAACAAACATA Run BLAST on NCBI transcript from alignment at scaffold_513:335100..349574+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070076 ID=TCONS_00070076|Name=TCONS_00070076|organism=Clytia hemisphaerica|type=transcript|length=14475bp|location=Sequence derived from alignment at scaffold_513:335100..349574+ (Clytia hemisphaerica)
tagcgatgaaatttgtttgaaaacgaggacaacaataaatttatgcatct
cgagaagagtgtattcaaAAGAAACTTTCGTTATTGCGGCAATTCTCATA
CTTCCCAACTTCAAATTAGGGTAGATACGATGAGGGATAATTTTTAGAAT
CCATCAGGGGAAGTCtatttatttttgtgaattaATTTCAAGAAATCCAA
TAAGTAAATTTTAGGATCAATATGTTCAAGAAAGCGCATCCAAAGTTCCA
ATAAAAAGAGAAACGTATAGttcattaaaaaatttagagaataaatatac
atgtttttttctatatgcttaacgtttataagcacatgcagactcagttt
ttggtacccaACCAATGGAAGCCTGATAAAGGGGcggacacttgcttata
aaaaaacatgtattttaaTAAATtggtactctcgggtgcctaataaacgt
acagaccaaaataaacgtacagggagGGGGAtgaaattggaattaataaa
cgtacaggctgaaatagACGTACTGgcgagaaatcagagctaaaataaat
aaacgtacaggctaaaataaacgtacagggaaaaatctaccattttttta
aaagttgaacATCCAGGTCGAAACGACTGACTTAAAGTATAAGGAATATC
TCTTATAGAGCAATGACAAGTACTTAAATAATCTTTTATTACTGTAAGTA
ACAAATAAATTAATCGAGTCAATACTTTTTATCAGTTTTTAGAAGAGAAA
GTATcttgaacaaattttttccaGTAAGAATCGGGCAATATTgggtcaaa
ataaataaacgtacaggagggaataaacgtacaggcgggaaaattcttca
aaataaataaacgtataggtcctaataaggtgcgtacaggcgggaaattt
gacacgaaaaaaataaacgtacatgtacgtttattaggcacccgagagta
ctgGCCAAACAATTTAGAAACAAATATTTCTATACCCATGCTCCTTCCCT
TCTGGAAACACATTTGTCTTAGGTATCGAGTTTCAATGGATACATTACCT
GAACACATTCTCCTGCACTTATGAGAATCCTGGGGGAGGGGATTTACTTA
GGCataatgggtgccgggtatgtgcgagccataagggtcccctTTTTTAC
ACGCTCGAAAGTCCCTCAAAACCAGCTCCCTCTTAAGGTCATATAAATTC
TTGGAATTTAgtctaaaatttgaaatttttggctgaattttttggggaat
agtctctctaagggtggaaGAAAACGtcaaataataaagaaaattcaaga
ttcagtctctgtaagggtcgattttcgaacttcagTCGGATATACCCGTC
ATCTCCGGGGACCAACGGATAGGAATTTTCTGTTGGTCCCAACACAATGA
GCTTTagtcttttaaaaataaaatataggAATTATGAAATTATGTTAATT
ACGAAAATAAATATACAGATACCAAATTCAAGTTGAGTTATTTGCTTTCA
ATTTACAGTTTGCTTACTAtcagttttgttttttcaatCATTCCAAAGGA
CTTGTTGAAATACTGTACTACATCCCTCCATACTTCAATATAATCATCAg
acatttttcttttatcctcGCCACCAAAAAAGACCATAGTCCCTGGTAAG
GGTACTAGTGGATGTTTATCGTAAAGGCATATAGGAAGATAAGGCAGCTC
GATTAAATGGCCCATATTTTCATATCTGATAATTTGATAGTTGGTTTTAC
CAACTTTGTCCATCTTCTCTTTTGCAAGTTGTGCATATCTTTCGGTTGGC
CAATTGGCATCTCTCCCACTTACAATAACAAGGAGGTCTGCCTTTGATCT
CTCAAGTTGATGTATGGAATCTGGATGATCAATGGGATCATTGACACAAT
CTAAAATGCTAGCTATATTATCATGAATGAACTTCAGGCTCGCAGGATCA
GCTGGGATCATCTCTGTAACTTCACCTTTATAGATTGTTTGTGTGGCCAT
AGACGCTATACAACCATTCATGCAACACACAGCTTTGATTTGTGGTAAAT
GTGACATCATTGCGTAAGCGATATCACCGCCTTTTGAAGATCCTAAAACA
CCAATTTTCTCTGGATCCACAGAGTCATGTTGCCGTAGAAATTCAACTGC
TTCTTCAAAATACTCGATTCGTATCGGTGTTTCTGTGTACGTTTTTGGTA
AACCTTCAACTCCAAAGAAAGCCAGAGCTAATGTAACGAAGCCTTGGTGA
GCCAAGTATGAAGCAAAATGCTCTTTCACGTTTTTCTTCTTATTACCACC
AAACAAAGTGATAATGGCAGGGGCTTTTGTAGCACGCTCTGGCACAAAAA
GAGTccctttaaaattgaaattttgtaaattaattCTTTCAATGTTGCGA
GCTAAATATCGTGTAATCTGGGCTTTAGCAATTGAAGTCTTACCTTCAAA
CTTGTCAATGTGACCATTATAAAATCCAAAACAAAATGTTAAGTCTTGTA
AACCGTTGACGAAAGTGGCTGTAGGAAACCCTTTCCCTTGTTTTTCCATT
GACCAAAACAACCCCATATCTTCAATACCAGTATAAGTTCCACCAACAGA
TTcatttgttttcaaatcaaaacaaccatCTTTGTTTGTGTAAATGTGTG
CATAAGATTGAAAATCGAACCCTTCTTCTGGGCAAATTAATGTACTTTGT
ATTGTGAAAGGAGAATCGGGTTTGAATCCGTTTCCGATGATTTGTACTTT
CTCAGAAGTGTGAGATATTGATGGTGAAACATCTATTTCCATTGttatac
tttttgacttttaattaCGTAACTGAAAGGAAAGAAATCGAGTTAATACT
TGGATACCTGAATTCCATTCGCTCAAGATGTGCACTAATCTTTGTATGGC
TTGCCATTTTTCAACGAATGCTTTGATTCTAacatatcatataccgttga
aaagataattcagagcattataatttttaagaaaaaataattcaaaaaat
attcaaaaaatgaagatgtaAAATAGACTGGAAACTTAACTTCAGCTATA
GTTATTTTTCCAATACAGTTCTTACATCGAAGGTTATAGCCTCTAGAGGG
TAACTTGTAAGAGTCAAAATAccctttgttgttttttaaggCCAATAAAG
CCTTAAGCCAATGCAATTATTCTAAGTGGGAAATAATTGTATATCTGAAA
TCACTTCCCTGCTGAAATTAGTTGGCTGTAAAATACCCTGTActaaaaat
gtttataaaaaattttctagctacaaaaagtttaaaatttttttttcttc
atcttcatttttctaaattttattgaatttttttttcttaaaattacaAT
ACTCTAATTTATCTTTTCAACCGTAAATAATAATCGGATATGGAAAGCGA
AAGAAAGAATAAGGCAAGCGAATGGACTTTAggttgaaaattgattttac
ccGAGTAAATTTTCAGAGATAGTAATTTTTTTCGTTATTAATTTTCTGAA
TATTAAGCACAGCTTTTCAGGTTCAGAACTTGTTTACAGAATTATATAAC
ATTCGCGAATTCGCCGCAAAATTGGAGACATTTACTTTCCGTCAAAATTC
CTTTCCTTTAAAGTAAAGTTTGAGTAATTCACTAAAGAAAATTAGTATAT
Gtgatcacatgataacgagtgcaattcgagaataattgcacgagtgattt
tttttgctattaattttccgagtccgaggaaggacgaggaaaattcgaaa
caaaaaaatcacgagtgcaattttcgaatcgtacgagttattatgtgatt
acgagctaatcccACAACttgtttcactactttttccccgctaggaaagt
aaattacagaaattacactgaaagttttatattttttcttctatctacgt
ttttcttttattaaagtttataaattttctttctcacaaaatgaaattcg
aattaaaacgttcgatgaaagaaaaatgtaagaaaaaatatttaaatcaa
ttttgtaaacattggcgctgcATCGAGAGCGatattaacgattaattgct
ccctttgaaggcgcgccaaataagaaagaataactcatcgtgcgattatg
aAACAAATTGCAACTATATCTTTGGATATAAAGCAACAACATCTTCAAAT
CTACATCTGCATAGCATATCTTAAATGCAACACAAAAAATCACCAACTAT
AAATATGTCACAGTTATATTGCAGACATTAAAATTgtggaaatagaaaat
aaaactaCAACTCCTACAAATCTACATCTGCATAGCATATCTTAAAATGC
TACACAAAAAATCACCAACTATAAATATGTCACAGTTATATTACAGACAT
TAAAATTgtcgaaatagaaaataaaactaCAACTCCTACAAATCTACATC
TGCATAGCATATCTTAAAATGCTACACAAAAAATCACCAACTATAAATAT
GTCACAATTATATTGCAGACATTAAAATTGtcgaaatataaaataaaact
ataACTCCTACAAATCTACATATGCATAGCATATCTTAAAATGCTACACA
AAAAATCACCAACTATAAATATGTCACAATTATATTGCAGACATTAAAAT
TgtcgaaatagaaaataaaactaCAACTCCTACAAATCTACATCTGCATA
GCATATCTTAAATGCTACACAAAAAATCACCAACTATAAATATGTCACAG
TTATATTGCAGACATTAAAATTgtcgaaatagaaaataaaactaTAACTC
CTACAAATCTACATAACATATCTTAAATAAAACACACAAAATTACCAACT
ATGAATAAAGTCActagcaaaatcaattttatttctatttcgatatttgg
aatttcagggtcggtcgggcccataaaacaactaatcaaattggtctcgc
ctaaatcTATATAGGCATTTCATATCTTAAAACGCAACACAAAATATTAT
CAACTATAAACATGTCACAATTATATTATCgaaaataaaactattacatc
tATAAATCTACATCTATTTAGCATATCTTATACAcaaggctggacttaaa
aactcttggtttgccgtcacccgaggctagattttggaggtgggtcgatC
AGTCGGAATTTTATTTGGTCATTCATggaattttgtaatttttgaagaaa
aaaaaatctcttcgTCGAAATAgtaataaaagtttttaggTCGGCAAGAT
TAGAGAAGAGTCGGTTggctgacggcaaaccaacattttcaTAAGTCCAA
CCcattgaacaaaaaaaattatctaaaaataaaaacaaatcttttcgACT
CATACGACTTCATTATATGGTATGTCGTCAAATTGTTACTATTTGAAATA
TTGTACCATGAAATCAAAAGTATCCAAACGGTTATGTTACAACTTACTTT
CAATCATACATGATTTGGTATTGTCAGTATCAACGGTGAAAGAAGACTTG
AAGAACTTTACAACATCTGTCCAAACAGAAACATGATCTTTACTTATCAA
CTTTTTGTCATCACCACCAAAGAAAAGCATTAAGCCTTCAAACAAAGGAT
GTTTATCATACAAACAGATTGGCAAGTTCGGTAACTCGATTAAATGCCCC
ATATTTTGATACTCTATGATTTGGTAATTGATTTTGCCAGCTTCATCCAT
ACGTTGTTTTGCTAATTGAGCATGTCTTGACACAGGAAAGATGGTGTCTT
TTAGACTCACCACTATAAAGAGGTCAGCTTTGGATTGATGAATTTGATGG
ATACATTCAGAATGGTCATAAGGATCATTGACTGTGCGGATGGTGTCGAC
TACGTTATCGGTTATGAAACGTACCTTCGATATGTCACCAGGAATCTTAG
GTGTCCGATACCCTTTGTATAAAACGTCCGAGCCTAGTGGTGCTATACAT
CCATTCATGCAACACACAGCTTTGATTTGTGGTAAATGTGACATCATTGC
GTAAGCAATATCACCGCCTTTTGAAGATCCCAAAACACCAATCTTCTCTG
GATCCACAGAGTCATGTTGCCGTAGAAATTCGATAGCTTCTTCGAAATAT
TCCATTCGTATTGGAGATTCGTCATACATTTTTGGCAAACCTTCAACTCC
AAAGAAAGCCAGAGCTAAGGTGACAAAGCCTTGATGAGCCAAGTACGAAG
CAAAATGCTCtttcacgttttttttcttattaccACCTAACAAAGTGATA
ATGGCAGGGGCTTTTGTAGCACGCTCTGGCACAAAAAGAGTTCCtttgaa
attatgattcctCAAAAGAATTCGTTCAACGGCACGAGCTATGTATCGTG
TAATCACAACTTTAGCATTTCCTGTATGACCTTCAAATTTGTCCACGTGA
CCATCGAAGACACTAAAACAATACCTAAGATTTTGTAAACCATTGGTAAA
AGTTGACATCGGAAAAGCTTTTCCTTGTTTTTCCATGGACCAAAACAACC
CCATGTCTTCAATGCCAGTATAAGTTCCACCAACAGATTcatttgttttc
aaatcaaaacaaccatCTCTGTTCGTGTAAATGTGTGCATAAGATTGAAA
GTCGAATCCTTCTTCTAGACAAATTAATGTACTTTGTATTGTGATCGGGG
AATCGGGTTTGAATCCGTTTCCCGTGATTGAAACTTTCTCAGTGGTGTGA
GATAATGATGGTGATACCTTCAATTccatttaatttaattttttttgtat
ctATTTGGACCTTGAAAACGAGAGATAGCACACAATCTTTCACACAATCT
TTCACACAGAggtctttcaaagatattaCAATTCGAGGTATATCATGTTA
ATTTATGTAATTCAACAAGGGGGTTTCAGATTACGAATAAGACGGCTTGG
AAGAATTAATTTAAGAAATCACTTAGAAAACACTGATTATAAGGCACCAA
AGCTGAAGTTTccagttttttataaggacatgttttttttttgactgtac
caaaatcaggttttcgaaaatcgtgaaaatcactttactttaattatttc
gtcattcgcatgatgaattttttcaaaattttgatatgtattgaaatttg
ggaagggctttaaaatgagctatttgaaatttcaaaattcggagtatttc
aggattaattaatcatggAGTGTTTTGGATCATATCTCACTCCATGACTC
ATTATTCGGTCCTGAGGAGGTTTCTATGCATTCCTGAGATagcctaaaat
cataaaataggctgaggagtaatttttttaaagtccgGAGTGAGTTATGA
TCAAAACAAGTCCTTTGGACTTtcttaatcatttttcactcattttaaca
attcccgttttctttagttcgttcctttcttatcaactaaacaaaaatct
caaatcacttCCCTGATAGATAGACttgtcaggaaaatatatacgattag
aattagcacctagatttcaaaaatgatcaatttgatcccattttcctccg
gttttttccaaaaaaaagaggttgatgtgaaaattcaatcctttagctac
accctgatataaatttcgtatataaattggacacgacaaaggccaaatat
agagccgactttataaatccgaaatagactatgatttttttcatcctgaa
atactccggaTTCAACAAGCGATATCTTAAGTTTCATAAAAGCTATTAAG
ATCGGACAAAAAGTATCGGACAGAGCTActaatctattttcttatttttg
aataacgataagaaagggttcaactgtctctgttagtgccgatttgaacc
gggttggttgaaaatcggcattttggtacagtcaaaaaaaaaacatgtcc
ataaCCCAACTCTTCAGCCAATTAGAATTTGATGAACTCAAATTATAAAC
AAATATCACTATAGGGCTTGGGgacatccatatagtacgtacgcagtagg
ctgcacacatcccctcttatatagttttgatatatcaaaactaatttggg
gatgcatgcagcctacgtacgcagtgaaggggagAGGGGGTTAAAAAAAA
CCCGTACGTCTATTGTTTAGAATGAGATGTTGGTATTGAGGCGTTACTCT
TATTTTAGAGAGTCTTTGCCCagtttattgtttaaatgacgccatttcta
ttgttctcaacgTACGAGGGAAGGGGTGGCAAATATCGGGAAatttttgc
gtacgtactacatgtttcttttttataaacataacgtttataagcatatg
ttgGCTCGGTTCTTGGTACCtgaacaatggctctattgtttgagaacaat
agaatgctaaacATAATACGAGCCTGATATaagggcagacacttgcttat
aaaaaacatgtatgtggATGACCTACTAGCCTTTTCAATGAATTGATGac
tattaaattttcatttaaaaggaaataaaattaaataGGATATATATAAA
TCACAGAATTAGTTATTTACATTACATTCTGAAGTACATCCAGATTAGAA
AAATAtgcaacaaaataaaacaaacaaaaccaaTTTGAACTTAGGCACGG
TCACAGTACTCTGTATCAGAGTGTATTCCACGTTAATTTACtgctacggc
aatgaattttgaaattagcagtacatactgggtctgtgtacagacaaaga
TGACAGCTGATTATTCTTCCAATACTTTAAGAtaccaataatttgaaata
CCTTCGAATCATGTCAAAATTATTATCGATGTAGTGGAAAAGTCGAAATA
CGCGTTTCTTTATACCAACGGTGGTTACAGAAGGTACAATCATGGATATA
CAATATTTgcgacaaaggggatttccctgcgaaattttgaacaccacaaa
gGTTTTTTAAGTGCGTTAAAATACAGTTGGAAAGAAGAGTTCTAACTCTG
AGTTTAACACTTAAGACTTtgaaccttaggatctcaggatttaaaagctc
aaaatttgctccaataaggcttggaatatagacTAGAAGCCACCGAGCCC
TTCAAAACCAAAATGTTCGATGAAAGAAattagcaattctcgcccgagtC
TTAAATTCAGAAAAACGTGGAATCGGGTTTGAATTGTACTTTCTCAGAAG
TGTGAGATACTGATGGACTCACACTTAATTTCATTGTTTAACTTTGAATG
TCTAAAAAAAATCTGTctgttttctaaaaaatgaaattaaatacaTCTCA
TCACTTCAGATTTAAGTTGGTCGATAATTAATCCTAAGATTAAAACAGGG
TAAAATAGAGGACTAAAACTTAAGATATGTATAAGCTGACAAACAATCGA
AACAATGCCTCAGAGCAGGGGGGGGTACAAAGGCAGGATactaacccata
gccgggtggttgtgtctatttttgcatttcaaaaaagttagtacccggta
ctactttAGGGGTGGGGGTGTGTATTTTTTACTCTTCTAGCAAGTACAGG
gtactatttgggtactttCTCACAGAGTTTTTTCAGTAAAAAAAGTAgtc
ttttgtaatattttgacttttttcaaatattatttttggtCAGccgaagc
tgagcattcaaataggtaaaattttccataagacggcaaaaaaaaaaatc
cgattttccgatctcactttgatttctaaactttcttccgatcgggttaa
ctttttgggtacttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNgaatttatttattatggttgtgtgtttattccgccaagg
cggtaaatcaatcgcccaaattcatagaccaatcaaaagcgaggTTAAAG
CAAAAATgggggaaaatgagcttcccgcgtagttatgaattttaagtttt
gctttcgattatcatttgcgaccagcaaagtcttcaagatggttgtgtgc
atgttgtgtaacttaacagttactaaactacaaaatttatttacccagac
tggaggggccatccatatagtacgtataTACACAGTgaaaggggggagag
ggggttcagcaaaagcgtacatctattgtggGGGCCCCTTttgtttaaac
aaagtcatttctattgttctctgcgtacaaggggggagggagtgtcaaat
attttggaaaatctttgcgtacgtactatatggacaatgctaaagagaag
tatactttgagcttctcgtgggggggggggggggttgggggGGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNattagtctactctgtttcagtg
catctcttacatctgttaacccacttattaaagctatctagctaagctct
attggctgaccttccagccttggctggtttattttgatttgaaatcttga
gaaactttttgttactcttttgagaaattttttgatttttctgaagacaa
aacttccgaaatggtcaagaagtgtgttattaaaatcaaaggacaaaagc
cTCTGACTTAATGAATGACAGTTTGTTTGAAATTATCTGTTCAtttcagt
cagaaaaactaACATAGTACCCTCTCTTTTAAtctaatctgtaaaatata
agattttagggggtggtgtctctattttttacagcaaaaatgaagtagta
cccggtactagacatgggtgggtggtactaaaaagaaattgagtgaaaaa
tcaagttagtaccctatgggttagtaccctgcctctgtATCCCCCCCTGC
TCAGAGGAGGTCACTATAATAAAATGTAGAAATCACTTAAAATTGTAACA
TCATCCTTTCTTTGCCTTTGGTCTATTGAGTTATAATCAAGAAggaaata
aattataaaatattaTAATCGATTTAAAAAATACCTATCCTACAATTTTT
GagaacaaaaacataaaataactGTAACATTAAAATACATTATCAAATTC
ATGAAATACTTcgaataaaatagttttaacaAAAACGTCGTGTTGTGAAA
GTGTAAATATATATTATGTATAATATCTGAATAAGTTAGCGTGATTAAAC
ataagaatacacgtttttataagaacaaactataataagaacataaggct
tcaatggctaaaaatgttaagaacaagttaagaacattttaatgctttgc
ggactcgaaaacacccgatttcttaagaaaatgggtaaaaatggtcacaa
aatggtgaaaataagaacatgttaagaagacttttaggcttaaaacccaa
aaagttaagaacatccgaaggcttaaaagcGTTGACAGCCCTAAAACATT
ATTCCTTAATCTTAAGAAACTACAGTGAAATAGCCacaaaatgcttaaaa
ttagAACATCTATTGAACATTTATAAGCTTAAAACCTATAACAATTTAGG
ATCGGCTAAAGAAAATTTGGACATTCTTGTAGAAAAATCGTGAATGTTGC
GCACGTTCCTATGAAAAATGAGAACTTTTTTGGTTTCACATGATGAATGG
CAGCATTAAATACAGAACTACAAGGCTTATATTGATAAAAAGAGCATCCT
ATTGCAACATCATTCAATGAAGAAAGGAAATCCGAGTAACGGAACTTTGA
ATTGTAAAGATCACTGAGCTTTATATAGACCCTGGAGGCAGTTTCTTAAT
CCCGGCCAACCAAAAAATTTGAtaggagttttttttttttaaagtgttaC
CCTAATAGTAGCAAGCACTATTCAATTGCAGTGTAAATGCCAACTGACCA
ATCACAGTTTGTTCTGTCAATTATTTCGTTAGTTTTCTATGAACTGAAAT
CAAGATACCGTACTTCATTTTAATGAAGTGTGAAAGAAGTCAAATACTTG
TTTCCAAGCATCGATTTGTTCTTtagaattaaattttttattggATCCAC
CAAAGTACGGTCTCAATCGGTTAGGAATTAAAGGGTGATAAGCATGAGTA
CAAATTGGTAGATAATGTGGATCAATGAAATGACCAATGTTTGGATATCT
GATGATTTTGTaattagttttaccagctttGTCCATTCGTTCTTTGGCAA
TGTCAGTAAATAAACAACTTTTCCAGTTCATATCGTCTTCGCCAGCAATC
ATCAGTAGATCACCTTTGGATCGTTCTATTTGGTGGATTGCATTTGGGTT
CTCTTTAGGATCTTCCAAGCAATCAGATATATCAACAGAACCACATTCTA
AGAATCGTGCTGCGAACATATTAGCAGGTATTTGTTCTGTGGTGTTACCT
TTGTACGAAGTTGCTACTCCAACACTAACAACACTGCCGTTTAAGGTGCA
AACAGCTTTCACTTGCGGCAAATGACTGATCATCGCAATTGCTATATCGC
CACCTTTGGATTCGCCAAGGACACCAACATTGTTAGAATCCACTAATTCA
TGTTGCCGCAGATTCTCAAATGCTTCTTCAAAGTACTCTATATTTATTGG
TTCTTGGGTGTATGTCTTAGGTAAACCTTCACCGCCGAAATATCCCATTG
CGTATGTTACAAACCCTTGGCTTGCCAGATAAGCGGCATATTGCTCAGGC
ACCTGTTTCTTCTTTATACCACCAAACAAAGTCATGACAGCTGGGAAAGG
TCCATCACCTTCAGGTACGAATACAGTCCCCCGGAATTTACCAGTCTTTA
AGACGTGTCTTGATACCTTTTGTGCTAAGAATCGTGAAATTTGACTGGAC
GCAACCGGgggtaaattttctaaattttcactATGGTGACCTTCAAATAC
GTTAAAAgtatacggtaaatttcggacACCGTCTATCAATGTCGGACGAT
CATAAGACTCACCGCGTTTTTCCATGGACCAAAACAACCCCATATCTTCA
ATACCAGTATAAGTTCCACCAACAGATTcatttgttttcaaatcaaaaca
accatCTTTGTTCGTGTAAATGTGTGCATAAGATTGAAAGTCAAATCTTT
CTTCTGGACAAATTAATGTACTTTGTATTGTGATCGGGGAATCGGGTTTG
AATCCGTTTCCAGTGATGCCGATTTTCTCCGAGGTGTGAGAGGTAGCAGG
ACTTGCaattattttgtttgatttcgTGAAAGAAGTGCTGAAGCATCTTT
TTATTATTcgattcattttattttttgctttttagtcctgaaaagaaaaa
tgagggaaaaatacaaaaagagtTTACTGAAAAAAGATAAGCAAAATAAA
AACTCCTCCGAGGGAAACAAACATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070076-exon-scaffold_513-1491911889:335100..337856 | TCONS_00070076-exon-scaffold_513-1491911889:335100..337856 | Clytia hemisphaerica | exon |
| TCONS_00070076-exon-scaffold_513-1510915933:335100..337856 | TCONS_00070076-exon-scaffold_513-1510915933:335100..337856 | Clytia hemisphaerica | exon |
| TCONS_00070076-exon-scaffold_513-1575043694:335100..337856 | TCONS_00070076-exon-scaffold_513-1575043694:335100..337856 | Clytia hemisphaerica | exon |
| TCONS_00070076-exon-scaffold_513-1491911889:349383..349574 | TCONS_00070076-exon-scaffold_513-1491911889:349383..349574 | Clytia hemisphaerica | exon |
| TCONS_00070076-exon-scaffold_513-1510915933:349383..349574 | TCONS_00070076-exon-scaffold_513-1510915933:349383..349574 | Clytia hemisphaerica | exon |
| TCONS_00070076-exon-scaffold_513-1575043694:349383..349574 | TCONS_00070076-exon-scaffold_513-1575043694:349383..349574 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_513 | supercontig | scaffold_513:335100..349574 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006637 | acyl-CoA metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016790 | thiolester hydrolase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006637 |
acyl-CoA metabolic process |
| molecular_function |
GO:0016790 |
thiolester hydrolase activity |
Blast
BLAST of TCONS_00070076 vs. Swiss-Prot (Human)
Match: ACOT1 (Acyl-coenzyme A thioesterase 1 OS=Homo sapiens GN=ACOT1 PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.447e-61 Identity = 139/414 (33.57%), Postives = 217/414 (52.42%), Query Frame = -2
Query: 1527 EKVQIIGNGFKPDSPFTIQSTLICPEEGFDFQSYAHIYTNKDGCFDLKTNESVGGTYTGIEDMGLFWSMEKQGKGFPTATFV--NGLQDLTFCFGFYNGHIDKFEGKTSIAKAQITRY-LARNIERINLQNFNFKGTLFVPERATKAPAIITLFGGNKKKNVKEHFASYLAHQGFVTLALAFFGVEGLPKTYTETPIRIEYFEEAVEFLRQHDSVDPEKIGVLGSSKGGDIAYAMMSHLPQIKAVCCMNGCIASMATQTIYKGEVTEMIPADPASLKFIHDNIASILDCVNDPIDHPD--SIHQLERSKADLLVIVSGRDANWPTERYAQLAKEKMDKVGKTNYQIIRYENMGHLIELPYLPICLYDKHPLVPLPGTMVFFGGEDKRKMSDDYIEVWRDVVQYFNKSFGMIEKT 2753
E V+I G P+ P T++++L E+G FQ++A + G DL+ ++GG++ G+E MGL W++E + P V + L +GH D G+ + + + RY L + R ++ +GTLF+P P I+ +FG + E+ AS LA +GF +ALA++ E LPKT ET + +EYFEEAV +L H V +G+LG SKGG++ +M S L I A +NG +A++ YKGE + + +K D A I+D +N P++ PD S +ER+++ L +V D NW +E YA A +++ G+ QII Y GH IE PY P+C H LV G+ + +GGE R + ++ W+ + +F+K G E T
Sbjct: 17 EPVRIAVRGLAPEQPVTLRASLR-DEKGALFQAHARYRADTLGELDLERAPALGGSFAGLEPMGLLWALEPEK---PLVRLVKRDVRTPLAVELEVLDGH-DPDPGRL-LCRVRHERYFLPPGVRREPVRAGRVRGTLFLPPEPGPFPGIVDMFGTGG--GLLEYRASLLAGKGFAVMALAYYNYEDLPKT-MET-LHLEYFEEAVNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEPPYFPLCRASLHALV---GSPIIWGGE-PRAHAMAQVDAWKQLQTFFHKHLGGHEGT 416
The following BLAST results are available for this feature:
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