TCONS_00070060 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070060
Unique NameTCONS_00070060
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length165

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070060 ID=TCONS_00070060|Name=TCONS_00070060|organism=Clytia hemisphaerica|type=transcript|length=165bp
aaagaAGGAGCCAAGAAGAACTAAGTCTCTCCTCTGATGTTGGAACCCCA
AAAACGGTCTTTTTTAAGACCACAAAtctcttaaaaaacaaaccatACTT
GTCTATTTTTTGAACCTCTGGTTTCAAACACAACCCTAACCGTAACCCTA
GCTTCAAAATATAAC
Run BLAST on NCBI

transcript from alignment at scaffold_512:182998..183162

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070060 ID=TCONS_00070060|Name=TCONS_00070060|organism=Clytia hemisphaerica|type=transcript|length=165bp|location=Sequence derived from alignment at scaffold_512:182998..183162 (Clytia hemisphaerica)
GTTATATTTTGAAGCTAGGGTTACGGTTAGGGTTGTGTTTGAAACCAGAG
GTTCAAAAAATAGACAAGTatggtttgttttttaagagaTTTGTGGTCTT
AAAAAAGACCGTTTTTGGGGTTCCAACATCAGAGGAGAGACTTAGTTCTT
CTTGGCTCCTtcttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043621XLOC_043621Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070060-exon-scaffold_512-1491911889:182998..183162TCONS_00070060-exon-scaffold_512-1491911889:182998..183162Clytia hemisphaericaexon
TCONS_00070060-exon-scaffold_512-1510915933:182998..183162TCONS_00070060-exon-scaffold_512-1510915933:182998..183162Clytia hemisphaericaexon
TCONS_00070060-exon-scaffold_512-1575043694:182998..183162TCONS_00070060-exon-scaffold_512-1575043694:182998..183162Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_512supercontigscaffold_512:182998..183162 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070060 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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