TCONS_00070052 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070052
Unique NameTCONS_00070052
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length148

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070052 ID=TCONS_00070052|Name=TCONS_00070052|organism=Clytia hemisphaerica|type=transcript|length=148bp
GTATAAACGCTCTCCAGTTTGTTGTTCAAGATCTCTCCATATTGGAAATG
AATCGAAAGTCATTTGCGAATAAATCTTTTTGGCGTACAGACATCTTGTG
ATTCTTGTATGACCATGTGAGCTTCCTCGGGTGTGAGGTAGTGGAAAC
Run BLAST on NCBI

transcript from alignment at scaffold_512:63857..64004

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070052 ID=TCONS_00070052|Name=TCONS_00070052|organism=Clytia hemisphaerica|type=transcript|length=148bp|location=Sequence derived from alignment at scaffold_512:63857..64004 (Clytia hemisphaerica)
GTTTCCACTACCTCACACCCGAGGAAGCTCACATGGTCATACAAGAATCA
CAAGATGTCTGTACGCCAAAAAGATTTATTCGCAAATGACTTTCGATTCA
TTTCCAATATGGAGAGATCTTGAACAACAAACTGGAGAGCGTTTATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043613XLOC_043613Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070052-exon-scaffold_512-1491911889:63857..64004TCONS_00070052-exon-scaffold_512-1491911889:63857..64004Clytia hemisphaericaexon
TCONS_00070052-exon-scaffold_512-1510915933:63857..64004TCONS_00070052-exon-scaffold_512-1510915933:63857..64004Clytia hemisphaericaexon
TCONS_00070052-exon-scaffold_512-1575043694:63857..64004TCONS_00070052-exon-scaffold_512-1575043694:63857..64004Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_512supercontigscaffold_512:63857..64004 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070052 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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