TCONS_00069996 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069996
Unique NameTCONS_00069996
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length95

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069996 ID=TCONS_00069996|Name=TCONS_00069996|organism=Clytia hemisphaerica|type=transcript|length=95bp
GATCATCCTAGTATATTTCCTCACTGATTCTGCCAGTTATAGGTTAATCT
AAAGTTGATCTGTTGTGATACAAGAATCCACTTGGACATCTAGNN
Run BLAST on NCBI

transcript from alignment at scaffold_511:327251..327345

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069996 ID=TCONS_00069996|Name=TCONS_00069996|organism=Clytia hemisphaerica|type=transcript|length=95bp|location=Sequence derived from alignment at scaffold_511:327251..327345 (Clytia hemisphaerica)
NNCTAGATGTCCAAGTGGATTCTTGTATCACAACAGATCAACTTTAGATT
AACCTATAACTGGCAGAATCAGTGAGGAAATATACTAGGATGATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043575XLOC_043575Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069996-exon-scaffold_511-1491911889:327251..327345TCONS_00069996-exon-scaffold_511-1491911889:327251..327345Clytia hemisphaericaexon
TCONS_00069996-exon-scaffold_511-1510915933:327251..327345TCONS_00069996-exon-scaffold_511-1510915933:327251..327345Clytia hemisphaericaexon
TCONS_00069996-exon-scaffold_511-1575043694:327251..327345TCONS_00069996-exon-scaffold_511-1575043694:327251..327345Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:327251..327345 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069996 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top