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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069994 ID=TCONS_00069994|Name=TCONS_00069994|organism=Clytia hemisphaerica|type=transcript|length=1071bp
ttttaggggaatttttcctgaggtataagcatcctatagagaaggtctgg
agaaagtttcatctagatcttatttttttcctacaaacagcctgtatttt
tgtaacacaacCATACTATGAGTACTGCTCTCAAATCATCCTGTCAGAGG
TGTCGTTCAGATGTTGTGGAAAGTGTTATTCAGATATCGTGGAGGGTATC
CTTCAGTCATAATGGAAAGTGTTGATCAGTTATCGTGGAATGTGTTGTTT
AGATATTGCAGAAAGTGGACACGGTGGAGGATGTTGGTCTGATATCgtga
aaggtgttggttgaattttgtaGTTTAATGCTTTGGTCGAAATATGCCAG
ATAACTGTCACTCAAGCgtcaagctgaaaaattaactataaaaaatataa
aaaagagcGAAACATTAAACACAATCAACACAAGCCCAATAATAACTAAA
TAAACAGtaattaaaatctattaaaaaaatttaggccTTTTTTCTTAGAA
GAAACtttaattgaagatttttgacaaGCACAAACCCATTCTTGTATGAA
CTGGTAAAAGTCAATATTTCAGTCTCAACTAACACTGATTTTCTACCATA
AAAGAAACTACAAAATTCAGTAAATATAAACCTTACCCATAGACAAGGTG
TCAGGCATttatgttgaaaaaaaattgtttgtgcGTGGTCTTGAGGAAAA
CAATCCCTTCTAACTAATATTGCCAAAAAAGCAACAGCAAAGATTTTAAG
CTTTCTAGCCTTCAAGAATATTCTTCTTCACCAAACCAGAACCTAGTGCT
CCAAGAAAACAACCATGGATAAAGTTCACTCATGTCGTGTGCTTGCAACT
GCTTCCCCTTTCTGCCTTTCCTTCCTtcgatgtttttttgttttggtttt
ctctCCCAAGCTCGGCAATAAATCTACGggattttttcgcaaaaatcacc
GGCCCTTCTTCATGGTCGGTCAGGGCaaagtaaaatcaagaaaaacgccG
AGTTGATATCGtccgtaaacacagactctatccgccgcgaaacatattac
gttttagataatatacaaact Run BLAST on NCBI transcript from alignment at scaffold_511:301650..302720 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069994 ID=TCONS_00069994|Name=TCONS_00069994|organism=Clytia hemisphaerica|type=transcript|length=1071bp|location=Sequence derived from alignment at scaffold_511:301650..302720 (Clytia hemisphaerica)
agtttgtatattatctaaaacgtaatatgtttcgcggcggatagagtctg
tgtttacggaCGATATCAACTCggcgtttttcttgattttactttGCCCT
GACCGACCATGAAGAAGGGCCggtgatttttgcgaaaaaatccCGTAGAT
TTATTGCCGAGCTTGGGagagaaaaccaaaacaaaaaaacatcgaAGGAA
GGAAAGGCAGAAAGGGGAAGCAGTTGCAAGCACACGACATGAGTGAACTT
TATCCATGGTTGTTTTCTTGGAGCACTAGGTTCTGGTTTGGTGAAGAAGA
ATATTCTTGAAGGCTAGAAAGCTTAAAATCTTTGCTGTTGCTTTTTTGGC
AATATTAGTTAGAAGGGATTGTTTTCCTCAAGACCACgcacaaacaattt
tttttcaacataaATGCCTGACACCTTGTCTATGGGTAAGGTTTATATTT
ACTGAATTTTGTAGTTTCTTTTATGGTAGAAAATCAGTGTTAGTTGAGAC
TGAAATATTGACTTTTACCAGTTCATACAAGAATGGGTTTGTGCttgtca
aaaatcttcaattaaaGTTTCTTCTAAGAAAAAAggcctaaattttttta
atagattttaattaCTGTTTATTTAGTTATTATTGGGCTTGTGTTGATTG
TGTTTAATGTTTCgctcttttttatattttttatagttaatttttcagct
tgacGCTTGAGTGACAGTTATCTGGCATATTTCGACCAAAGCATTAAACt
acaaaattcaaccaacacctttcacGATATCAGACCAACATCCTCCACCG
TGTCCACTTTCTGCAATATCTAAACAACACATTCCACGATAACTGATCAA
CACTTTCCATTATGACTGAAGGATACCCTCCACGATATCTGAATAACACT
TTCCACAACATCTGAACGACACCTCTGACAGGATGATTTGAGAGCAGTAC
TCATAGTATGgttgtgttacaaaaatacaggctgtttgtaggaaaaaaat
aagatctagatgaaactttctccagaccttctctataggatgcttatacc
tcaggaaaaattcccctaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069994-exon-scaffold_511-1491911889:301650..302720 | TCONS_00069994-exon-scaffold_511-1491911889:301650..302720 | Clytia hemisphaerica | exon |
| TCONS_00069994-exon-scaffold_511-1510915933:301650..302720 | TCONS_00069994-exon-scaffold_511-1510915933:301650..302720 | Clytia hemisphaerica | exon |
| TCONS_00069994-exon-scaffold_511-1575043694:301650..302720 | TCONS_00069994-exon-scaffold_511-1575043694:301650..302720 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_511 | supercontig | scaffold_511:301650..302720 . |
Blast
The following BLAST results are available for this feature:
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