TCONS_00069979 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069979
Unique NameTCONS_00069979
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length292

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069979 ID=TCONS_00069979|Name=TCONS_00069979|organism=Clytia hemisphaerica|type=transcript|length=292bp
NNCAAAGGACCAAGTTCAAGtcatttatgaaaatattataaGTTAATGGC
TAACAGATGATATGTTTTGAACCGTTCGTAATCTCCAAGTTTAGTTTGCA
GCATACATTCACTACAAACCAAATCTTAATTAGGATGTCTTATTTCCGTT
TCATGTCACATCTCTGCAAGAGACTTGAATCACATTGTACCGATCTCGAA
ACAACAGCTTAAATTCAGATCTTTTAAAGCTctcttaaaactcaaattta
gTTCTTCAATTTTCCACATAATTGTATTTAGTTTCCTAGCTG
Run BLAST on NCBI

transcript from alignment at scaffold_511:14013..14304

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069979 ID=TCONS_00069979|Name=TCONS_00069979|organism=Clytia hemisphaerica|type=transcript|length=292bp|location=Sequence derived from alignment at scaffold_511:14013..14304 (Clytia hemisphaerica)
CAGCTAGGAAACTAAATACAATTATGTGGAAAATTGAAGAActaaatttg
agttttaagagAGCTTTAAAAGATCTGAATTTAAGCTGTTGTTTCGAGAT
CGGTACAATGTGATTCAAGTCTCTTGCAGAGATGTGACATGAAACGGAAA
TAAGACATCCTAATTAAGATTTGGTTTGTAGTGAATGTATGCTGCAAACT
AAACTTGGAGATTACGAACGGTTCAAAACATATCATCTGTTAGCCATTAA
CttataatattttcataaatgaCTTGAACTTGGTCCTTTGNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043558XLOC_043558Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069979-exon-scaffold_511-1491911889:14013..14304TCONS_00069979-exon-scaffold_511-1491911889:14013..14304Clytia hemisphaericaexon
TCONS_00069979-exon-scaffold_511-1510915933:14013..14304TCONS_00069979-exon-scaffold_511-1510915933:14013..14304Clytia hemisphaericaexon
TCONS_00069979-exon-scaffold_511-1575043694:14013..14304TCONS_00069979-exon-scaffold_511-1575043694:14013..14304Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:14013..14304 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.45301	5.25522	2.45919	1.83111	0.634756	0	0	0	2.76048	2.05187	5.29463	0.711657	0.339647	1.47128	0.321131	0.81491	0	0.983433	0	0	0.411918	0.701929	0.56368	1.73139	0	0	2.33673	0	1.71736	2.18584
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069979 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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