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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069863 ID=TCONS_00069863|Name=TCONS_00069863|organism=Clytia hemisphaerica|type=transcript|length=1397bp
CAGTTGAGAGAAATTAGTTTTTCATCAACAGAGTCTAAATTAAAACCTCA
AATTTATGAGGCTGTAAGGAAATATAATCTCCTTAGTGCTATCTGCTGGA
GACTATATAGTTTAGCCAACGCTAAATCTCGTGTGTGGTGATGAAAAGAT
GAACGTGAAAAAATCAAGAAGTACAAGAAGTTGTCTTCAGTGTTTTGCAG
TTTCAGTGTTTACATGGATGCTGTATAATATCATCAATCCTTAAAGTTAC
CTGAGAGTCAAAGCACAAAGGTAAGCAAGGCGTTGCTTTTAAGGTCACAG
TTTGCTTCAGAGCAAACTGGTGCGACCGCTGTTTTACAAAGCAATTAACA
CTTTCTTCAGCAGTCAGCAGAACAACATCCATCACAATCATGTATGATAC
ATacttcataaaaaatgaaaaacagcaCATGTAAAATGCAATATAATAAC
TAACAATGTCAAAAAGAATTGCAGAGGACCGAGAGAAGTTATAATTCAAA
ATTACTCCAAGAAGTACatctaaagaaaaacaaagactaCCTCTGCTGAA
ATCAAAACGCTTGCATCCTAGCTAACACGCTGAACTTTCTAAGCCACCGT
ACCATCCACCTATACCTCTCTGGGCCACCGTACACGCGGGATATCTCTTA
GATATTTGCGTGGTTATCTCCCTAATATTCAGccaccaaaaataaaaatt
aaagatggtaactTAAGCTGcacgatttcactttcgatttcaacttTCAA
CCTCCCAGATGCCAGACTCCGTAAACAAAAACGCGACGGTAAAAAACCGC
CTTCAGGCGGTCGataattaaaatttccaggtgCCACTGAATCAATCAAT
TACCATCCCCTTGttgatattttgataaaacagtgGGGTTCAACCACTGA
GCTATAAACCCTGGAGACAGTTACTTTCAAGATTGTTGAAGCCGGTCTTT
TAAAAAGTTTCCCTTAGATTATAAATGCTCTAGCAACAAAGAGCTAGACC
AATCTTCTCTGCGCTCCTTCGACTGTTCGAAATTTCTTAAGGCCGAGGGA
ATTTGAATATGAGAGTTCAGTGTCGGCCGCCCGTAAGTCAAAAAAGCAAc
cgcctgaaaatttcattatttcaaaaaaattcatcattacCGCagtcaca
aataacttgtgttcacGTCATTTCCAGGCCTAAAAAGTGAGTTATCGGTT
GGTCGCCACTAAAATCGTCGGAAAAATAAGGTCTGAAAACATAGGCTTTG
TCATAGAGTTACTCTCAGCAATtgtatgaaaagtgaattttcactgTGTT
TATATACTGCGAGCGATGTAAATTTCCTGTTTTCGTACTATAATCCGATA
AAGCTAACCACAGAGTCCTGATATTGCCCAATTTTTTGTTCTgtgga Run BLAST on NCBI transcript from alignment at scaffold_510:44205..45601 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069863 ID=TCONS_00069863|Name=TCONS_00069863|organism=Clytia hemisphaerica|type=transcript|length=1397bp|location=Sequence derived from alignment at scaffold_510:44205..45601 (Clytia hemisphaerica)
tccacAGAACAAAAAATTGGGCAATATCAGGACTCTGTGGTTAGCTTTAT
CGGATTATAGTACGAAAACAGGAAATTTACATCGCTCGCAGTATATAAAC
AcagtgaaaattcacttttcatacaATTGCTGAGAGTAACTCTATGACAA
AGCCTATGTTTTCAGACCTTATTTTTCCGACGATTTTAGTGGCGACCAAC
CGATAACTCACTTTTTAGGCCTGGAAATGACgtgaacacaagttatttgt
gactGCGgtaatgatgaatttttttgaaataatgaaattttcaggcggTT
GCTTTTTTGACTTACGGGCGGCCGACACTGAACTCTCATATTCAAATTCC
CTCGGCCTTAAGAAATTTCGAACAGTCGAAGGAGCGCAGAGAAGATTGGT
CTAGCTCTTTGTTGCTAGAGCATTTATAATCTAAGGGAAACTTTTTAAAA
GACCGGCTTCAACAATCTTGAAAGTAACTGTCTCCAGGGTTTATAGCTCA
GTGGTTGAACCCcactgttttatcaaaatatcaaCAAGGGGATGGTAATT
GATTGATTCAGTGGcacctggaaattttaattatCGACCGCCTGAAGGCG
GTTTTTTACCGTCGCGTTTTTGTTTACGGAGTCTGGCATCTGGGAGGTTG
AaagttgaaatcgaaagtgaaatcgtgCAGCTTAagttaccatctttaat
ttttatttttggtggCTGAATATTAGGGAGATAACCACGCAAATATCTAA
GAGATATCCCGCGTGTACGGTGGCCCAGAGAGGTATAGGTGGATGGTACG
GTGGCTTAGAAAGTTCAGCGTGTTAGCTAGGATGCAAGCGTTTTGATTTC
AGCAGAGGtagtctttgtttttctttagatGTACTTCTTGGAGTAATTTT
GAATTATAACTTCTCTCGGTCCTCTGCAATTCTTTTTGACATTGTTAGTT
ATTATATTGCATTTTACATGtgctgtttttcattttttatgaagtATGTA
TCATACATGATTGTGATGGATGTTGTTCTGCTGACTGCTGAAGAAAGTGT
TAATTGCTTTGTAAAACAGCGGTCGCACCAGTTTGCTCTGAAGCAAACTG
TGACCTTAAAAGCAACGCCTTGCTTACCTTTGTGCTTTGACTCTCAGGTA
ACTTTAAGGATTGATGATATTATACAGCATCCATGTAAACACTGAAACTG
CAAAACACTGAAGACAACTTCTTGTACTTCTTGATTTTTTCACGTTCATC
TTTTCATCACCACACACGAGATTTAGCGTTGGCTAAACTATATAGTCTCC
AGCAGATAGCACTAAGGAGATTATATTTCCTTACAGCCTCATAAATTTGA
GGTTTTAATTTAGACTCTGTTGATGAAAAACTAATTTCTCTCAACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069863-exon-scaffold_510-1491911889:44205..45601 | TCONS_00069863-exon-scaffold_510-1491911889:44205..45601 | Clytia hemisphaerica | exon |
| TCONS_00069863-exon-scaffold_510-1510915933:44205..45601 | TCONS_00069863-exon-scaffold_510-1510915933:44205..45601 | Clytia hemisphaerica | exon |
| TCONS_00069863-exon-scaffold_510-1575043694:44205..45601 | TCONS_00069863-exon-scaffold_510-1575043694:44205..45601 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_510 | supercontig | scaffold_510:44205..45601 . |
Blast
The following BLAST results are available for this feature:
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